AT4G14390

ankyrin repeat family protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
OG0000494
Physical Location & Seq
Forward (+)
8289610 .. 8292203
2594 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G14390.1

Sequence Viewer

Length: 2085 bp
ATGGACGAACTTTTTGTCTCAATCTCGTCAACCTTTAGCAAAACCTCTTGCATTACTGATCTTCTTCTTCCACTTGAGCTAGATAGAATTGAGGCACAAAGGTCAACAGATGCGTCTCATGATCAACAGAACAGAACATACTTACCCATGAACATACACGGTTCACAAGACTTCTCTCAAAGCGGAGGAGATGGCGTCACGCCACTTACAGGAGACACCGAATCTGTGCCAGAGTTCCTTACTAACCTTAGATTGTCGGATCTTTACGCTATCCGTGGTGAAGATGTCCGGATGATTCCAGAGGTTTTTAGTAAAATAAGTGATGGGAACAAAGAATGTCTGGAGAAGTTGAGAAGCCGTGGAATTTCAGTGGCACGTATCAAGAGCAATACAGGAGATTCAATTCTTCATCTTGCTGTTACATGGGGTCATCTAGAACTAGTGAAGGAGATTGTCTGTGAATGCCCGCGTCTTCTCTTGGAGCAAAACTCAAGCGGTCAGACACCGCTACATGTGGCGGCTCATAGCGGTCATACCACTATTGTTGAGGCTTTTGTCGCATTGGTAACATTTTCTTCAGCTAGACTGTGTAATGAAGAGAGTGAGAGAATGAACCCATATGTTCTCAAGGACAAAGATGGAAATACTGCTCTGTACTACGCGATTGAAGGGCGCTATTTCGAGATGGCTGTATGTCTGGTGAACGCAAACCAGGATGCTCCTTTTCTTGGAAATAAGTATGGAGTATCTTCCTTGTTTGTGGCAATAAATACTGGAGATGTATCTCTTGTGAAAGCAATTTTGAAAATCATAGGCAACAAGGACCTTAAAGGGAAGAAGTCTAACTTGGAGTCAAAGTTACAAGGGCAGAAATCTCTTGCACATGTTGCTTTGGTGACCCAGAGTATAGCAGGTGTCCTTGATGTTATTCTTGATGAATATCCAAGTCTTATGGACGAGCGAGATATAAATGGTTGGACTTGTCTTTCACTCGCAGCACATATAGGGTATTATGAAGGAGTATGCAACCTCTTAGAACGATCAACAAAGGGTGTTTATGTCTGCGACCAAGATGGTTCTTTTCCAATTCATACAGCTGCAGAGAAAGGTCATGAAAATATTGTTGAAGAGTTTATAAAACGATGTCCAGGTTCAAAACACTTACTTAACAAACTTGGTCAGAACGTTCTCCACATTGCAGCAAAAAATGGGAAATTTTGGATTTCGAACATGTTGATAATTAATAAAGATACGGAACATCTGGGTGTTGGGCAAGATGTGGACGGGAATACACCTTTGCATCTTGCCGTCATGAACTGGCACTTTAAATCCATTACTTGGCTTGCTAGGAGTAGCAAGATACTGAAAGTGCGGAACAAAAACGGCTTAAGAGCTAGGGATATTGCCGAGAGAGAGGTGAAACCCCACTACATCTTTCAGGAGAGGTGGACACTGGCGCTCTTATTATACGCTATTCACTCAAGGGGTTTCGAATCTGTACACTCATTAACAAAACCGTCAGTGCCACTAGACCCTAAAAATAACAGAGATTACGTCAACACTCTTCTCCTGGTAGCTGCTCTTGTAGCCACAATGACGTTTGCTGCAGGTTTTACAATACCAGGTGGGTTTAACAGCTCTGCTCCACACTTGGGCAGGGCAACTTTGGCCACTAATCCAACTCTCTTCATTTTTCTGGTACTTGACATCTTGGCCATGCAAAGTTCCGTTGCAACAATAGGTATTCTTATTTGGGCGCAGTTAGGTGATCCAGTGCTCATTCGCTCATCCTTACATGTGGCTTTGCCCTTACTGCTTTTTGCTTTACTCTGCATGCCCTTGGCATTCCTTTTTGGCGTGGTCACTGCAGTTGGGCATGTGAAATGGCTTGTAGTCATCATTTGCATTATATCTGTTTTATTCTTTTCTTGGGCGATCTTTGTCCTTGGCCCTCACGTCATGCTACAACGGTCATACGTTTCTCCCAAGTACGCTGGTGACTTTCTCGTGACTTTTATGCAGTATAAAGACATAATTGGGCTTTTTGTGTCTTTGATAAAGTTTCTTTTTTGTGGTTGTTATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001101 GO:0002376 GO:0002831 GO:0002833 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0005886 GO:0005887 GO:0006464 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0008152 GO:0008219 GO:0009266 GO:0009314 GO:0009409 GO:0009416 GO:0009605 GO:0009607 GO:0009615 GO:0009617 GO:0009628 GO:0009719 GO:0009725 GO:0009751 GO:0009814 GO:0009816 GO:0009966 GO:0009987 GO:0010033 GO:0010646 GO:0012505 GO:0014070 GO:0016020 GO:0016021 GO:0016567 GO:0019538 GO:0023051 GO:0030176 GO:0031224 GO:0031226 GO:0031227 GO:0031347 GO:0031349 GO:0031984 GO:0032101 GO:0032103 GO:0032446 GO:0032870 GO:0035690 GO:0036211 GO:0042175 GO:0042221 GO:0042493 GO:0042742 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043900 GO:0043902 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044459 GO:0044464 GO:0045087 GO:0046677 GO:0048518 GO:0048583 GO:0048584 GO:0050789 GO:0050794 GO:0050826 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0065007 GO:0070647 GO:0070887 GO:0071229 GO:0071236 GO:0071310 GO:0071407 GO:0071446 GO:0071495 GO:0071704 GO:0071944 GO:0080134 GO:0098542 GO:0098827 GO:1900150 GO:1900424 GO:1900426 GO:1901564 GO:1901700 GO:1901701 GO:1902288 GO:1902290 GO:2000031 GO:2001023 GO:2001038
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank Ank_2 Ank_4 Ank_5 PGG

Protein Analysis

694

Amino Acids

76.71

Weight (kDa)

6.76

Isoelectric Point (pI)

36.69

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 107 - 186 5.2e-10 Ankyrin repeats (3 copies)
Ank_2 PF12796 329 - 414 1.4e-10 Ankyrin repeats (3 copies)
Ank_2 PF12796 363 - 450 6.7e-12 Ankyrin repeats (3 copies)
PGG PF13962 514 - 621 2.1e-25 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000494)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G03670 AT4G03440 AT4G03440 AT4G03440 AT4G03450 AT4G03450 AT4G03460 AT4G03460 AT4G03470 AT4G03480 AT4G03480 AT4G03490 AT4G03490 AT4G03490 AT4G03490 AT4G03490 AT4G03500 AT4G03500 AT4G03500 AT4G03505 AT4G05040 AT4G05040 AT4G05040 AT4G05040 AT4G05040 AT4G05040 AT4G05040 AT4G14390 AT4G14390 AT4G14390 AT4G14390 AT4G14400 AT4G14400 AT4G14400
fragaria_vesca FvH4_3g05910 FvH4_3g23320
malus_domestica MD03G1094000.v1.1 MD03G1094200.v1.1 MD03G1094600.v1.1 MD12G1218700.v1.1
prunus_persica Prupe.3G135100_v2.0.a1 Prupe.3G135200_v2.0.a1 Prupe.3G135700_v2.0.a1 Prupe.3G135700_v2.0.a1 Prupe.3G142400_v2.0.a1 Prupe.3G153800_v2.0.a1 Prupe.3G153800_v2.0.a1 Prupe.3G153800_v2.0.a1 Prupe.3G153800_v2.0.a1 Prupe.3G154000_v2.0.a1 Prupe.3G154200_v2.0.a1 Prupe.3G154200_v2.0.a1 Prupe.3G154600_v2.0.a1 Prupe.3G154700_v2.0.a1 Prupe.3G155200_v2.0.a1 Prupe.3G155300_v2.0.a1 Prupe.8G110300_v2.0.a1
pyrus_communis pycom03g07280 pycom03g07580 pycom03g07660 pycom03g07700 pycom03g07710
rosa_chinensis RchiOBHm_Chr3g0461161 RchiOBHm_Chr5g0041111
rosa_laevigata RLG00000023472 RLG00000023475 RLG00000034025
rosa_multiflora Rmu_co8126040.1_g000001 Rmu_co8268563.1_g000001 Rmu_sc0000964.1_g000014 Rmu_sc0028923.1_g000001 Rmu_sc0042194.1_g000001
rosa_roxburghii Rroxscaffold_1G00039610 Rroxscaffold_6G00401360
rosa_rugosa Rorug03G0048600 Rorug03G0048700 Rorug05G0190000
rosa_samantha Rh3AG105900 Rh3BG110200 Rh3BG268400 Rh3CG111800 Rh3DG111900 Rh5AG275800 Rh5BG280500 Rh5CG312600 Rh5DG288800
rosa_wichuraiana Rw3G009080 Rw5G025920

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1136
AarI CACCTGC 1 cut(s) 902
Acc36I ACCTGC 2 cut(s) 902, 1598
AccB7I CCANNNNNTGG 1 cut(s) 1338
AccII CGCG 2 cut(s) 469, 662
AccIII TCCGGA 1 cut(s) 288
AciI CCGC 7 cut(s) 183, 467, 495, 506, 518, 528, 1372
AclI AACGTT 1 cut(s) 1185
AclWI GGATC 2 cut(s) 267, 1763
AcoI YGGCCR 2 cut(s) 1668, 1713
AcsI RAATTY 2 cut(s) 363, 1214
AcuI CTGAAG 1 cut(s) 561
AcyI GRCGYC 1 cut(s) 195
AfaI GTAC 4 cut(s) 656, 1500, 1701, 1991
AfiI CCNNNNNNNGG 4 cut(s) 209, 728, 1338, 1652
AflII CTTAAG 1 cut(s) 1387
AflIII ACRYGT 4 cut(s) 511, 883, 1230, 1795
AgsI TTSAA 5 cut(s) 402, 668, 805, 1127, 1155
AhlI ACTAGT 1 cut(s) 439
AjiI CACGTC 1 cut(s) 1957
AjnI CCWGG 4 cut(s) 711, 1147, 1569, 1621
AjuI GAANNNNNNNTTGG 2 cut(s) 830, 862
AluBI AGCT 6 cut(s) 79, 581, 1097, 1394, 1577, 1638
AluI AGCT 6 cut(s) 79, 581, 1097, 1394, 1577, 1638
Alw21I GWGCWC 1 cut(s) 1779
Alw26I GTCTC 3 cut(s) 22, 120, 207
AlwI GGATC 2 cut(s) 267, 1763
Aor13HI TCCGGA 1 cut(s) 288
AoxI GGCC 3 cut(s) 1668, 1713, 1948
ApeKI GCWGC 5 cut(s) 995, 1097, 1199, 1577, 1604
ApoI RAATTY 2 cut(s) 363, 1214
ArsI GACNNNNNNTTYG 2 cut(s) 28, 32
AseI ATTAAT 1 cut(s) 1242
AspLEI GCGC 3 cut(s) 675, 1459, 1759
AspS9I GGNCC 2 cut(s) 823, 1949
AsuHPI GGTGA 6 cut(s) 290, 712, 907, 1429, 1778, 2009
AsuII TTCGAA 2 cut(s) 1226, 1491
AvaII GGWCC 1 cut(s) 823
BalI TGGCCA 2 cut(s) 1670, 1715
BauI CACGAG 1 cut(s) 2006
BbsI GAAGAC 1 cut(s) 464
Bbv12I GWGCWC 1 cut(s) 1779
BbvI GCAGC 5 cut(s) 1007, 1084, 1211, 1564, 1591
BccI CCATC 5 cut(s) 185, 317, 632, 679, 1067
BceAI ACGGC 3 cut(s) 342, 1292, 1399
BciT130I CCWGG 4 cut(s) 713, 1149, 1571, 1623
BclI TGATCA 1 cut(s) 121
BcoDI GTCTC 3 cut(s) 22, 120, 207
BcuI ACTAGT 1 cut(s) 439
BfaI CTAG 7 cut(s) 80, 434, 440, 582, 1347, 1395, 1529
BfmI CTRYAG 3 cut(s) 1098, 1605, 1866
BfoI RGCGCY 2 cut(s) 676, 1460
BfrI CTTAAG 1 cut(s) 1387
BfuAI ACCTGC 2 cut(s) 902, 1598
BisI GCNGC 6 cut(s) 519, 996, 1098, 1200, 1578, 1605
BlsI GCNGC 6 cut(s) 520, 997, 1099, 1201, 1579, 1606
Bme1390I CCNGG 4 cut(s) 713, 1149, 1571, 1623
Bme18I GGWCC 1 cut(s) 823
BmgBI CACGTC 1 cut(s) 1957
BmgT120I GGNCC 2 cut(s) 823, 1949
BmrFI CCNGG 4 cut(s) 713, 1149, 1571, 1623
BmsI GCATC 3 cut(s) 100, 706, 1309
BpiI GAAGAC 1 cut(s) 464
BplI GAGNNNNNCTC 2 cut(s) 473, 505
BpmI CTGGAG 2 cut(s) 362, 795
Bpu14I TTCGAA 2 cut(s) 1226, 1491
BpuEI CTTGAG 4 cut(s) 95, 475, 611, 1465
BsaAI YACGTR 1 cut(s) 377
BsaBI GATNNNNATC 1 cut(s) 939
BsaHI GRCGYC 1 cut(s) 195
BsaJI CCNNGG 4 cut(s) 274, 358, 1839, 1945
BsaWI WCCGGW 1 cut(s) 288
BsaXI ACNNNNNCTCC 4 cut(s) 180, 210, 842, 872
Bsc4I CCNNNNNNNGG 4 cut(s) 209, 728, 1338, 1652
Bse1I ACTGG 4 cut(s) 778, 1322, 1458, 1772
Bse3DI GCAATG 1 cut(s) 1194
Bse8I GATNNNNATC 1 cut(s) 939
BseAI TCCGGA 1 cut(s) 288
BseBI CCWGG 4 cut(s) 713, 1149, 1571, 1623
BseDI CCNNGG 4 cut(s) 274, 358, 1839, 1945
BseGI GGATG 3 cut(s) 297, 721, 1787
BseJI GATNNNNATC 1 cut(s) 939
BseLI CCNNNNNNNGG 4 cut(s) 209, 728, 1338, 1652
BseMI GCAATG 1 cut(s) 1194
BseNI ACTGG 4 cut(s) 778, 1322, 1458, 1772
BseRI GAGGAG 1 cut(s) 201
BseXI GCAGC 5 cut(s) 1007, 1084, 1211, 1564, 1591
Bsh1236I CGCG 2 cut(s) 469, 662
BshFI GGCC 3 cut(s) 1670, 1715, 1950
BsiHKAI GWGCWC 1 cut(s) 1779
BsiSI CCGG 1 cut(s) 289
BslI CCNNNNNNNGG 4 cut(s) 209, 728, 1338, 1652
BsmAI GTCTC 3 cut(s) 22, 120, 207
BsmBI CGTCTC 1 cut(s) 120
BsmI GAATGC 2 cut(s) 467, 1844
BsnI GGCC 3 cut(s) 1670, 1715, 1950
Bsp119I TTCGAA 2 cut(s) 1226, 1491
Bsp1286I GDGCHC 1 cut(s) 1779
Bsp13I TCCGGA 1 cut(s) 288
Bsp1407I TGTACA 1 cut(s) 1498
Bsp143I GATC 6 cut(s) 58, 121, 259, 1040, 1768, 1935
BspACI CCGC 7 cut(s) 183, 467, 495, 506, 518, 528, 1372
BspANI GGCC 3 cut(s) 1670, 1715, 1950
BspEI TCCGGA 1 cut(s) 288
BspFNI CGCG 2 cut(s) 469, 662
BspHI TCATGA 3 cut(s) 118, 1111, 1311
BspMAI CTGCAG 3 cut(s) 1102, 1609, 1870
BspMI ACCTGC 2 cut(s) 902, 1598
BspPI GGATC 2 cut(s) 267, 1763
BspT104I TTCGAA 2 cut(s) 1226, 1491
BspTI CTTAAG 1 cut(s) 1387
BsrDI GCAATG 1 cut(s) 1194
BsrGI TGTACA 1 cut(s) 1498
BsrI ACTGG 4 cut(s) 778, 1322, 1458, 1772
BssECI CCNNGG 4 cut(s) 274, 358, 1839, 1945
BssMI GATC 6 cut(s) 58, 121, 259, 1040, 1768, 1935
BssNI GRCGYC 1 cut(s) 195
BssSI CACGAG 1 cut(s) 2006
BssT1I CCWWGG 2 cut(s) 1839, 1945
Bst2BI CACGAG 1 cut(s) 2006
Bst2UI CCWGG 4 cut(s) 713, 1149, 1571, 1623
Bst4CI ACNGT 4 cut(s) 161, 588, 1518, 1971
Bst6I CTCTTC 4 cut(s) 591, 1122, 1569, 1691
BstACI GRCGYC 1 cut(s) 195
BstAFI CTTAAG 1 cut(s) 1387
BstAPI GCANNNNNTGC 1 cut(s) 887
BstAUI TGTACA 1 cut(s) 1498
BstBAI YACGTR 1 cut(s) 377
BstBI TTCGAA 2 cut(s) 1226, 1491
BstC8I GCNNGC 3 cut(s) 467, 1344, 1835
BstDEI CTNAG 2 cut(s) 248, 1033
BstDSI CCRYGG 2 cut(s) 274, 358
BstEII GGTNACC 1 cut(s) 895
BstF5I GGATG 3 cut(s) 297, 721, 1787
BstFNI CGCG 2 cut(s) 469, 662
BstH2I RGCGCY 2 cut(s) 676, 1460
BstHHI GCGC 3 cut(s) 675, 1459, 1759
BstKTI GATC 6 cut(s) 61, 124, 262, 1043, 1771, 1938
BstMAI GTCTC 3 cut(s) 22, 120, 207
BstMBI GATC 6 cut(s) 58, 121, 259, 1040, 1768, 1935
BstMWI GCNNNNNNNGC 5 cut(s) 557, 887, 1586, 1667, 1813
BstNI CCWGG 4 cut(s) 713, 1149, 1571, 1623
BstNSI RCATGY 6 cut(s) 515, 887, 1234, 1799, 1837, 1880
BstPI GGTNACC 1 cut(s) 895
BstSCI CCNGG 4 cut(s) 711, 1147, 1569, 1621
BstSFI CTRYAG 3 cut(s) 1098, 1605, 1866
BstUI CGCG 2 cut(s) 469, 662
BstV1I GCAGC 5 cut(s) 1007, 1084, 1211, 1564, 1591
BstV2I GAAGAC 1 cut(s) 464
BstX2I RGATCY 1 cut(s) 259
BstYI RGATCY 1 cut(s) 259
BsuRI GGCC 3 cut(s) 1670, 1715, 1950
BtgI CCRYGG 2 cut(s) 274, 358
BtrI CACGTC 1 cut(s) 1957
BtsCI GGATG 3 cut(s) 297, 721, 1787
BtsI GCAGTG 1 cut(s) 1863
BtsIMutI CAGTG 5 cut(s) 375, 1451, 1527, 1779, 1863
BveI ACCTGC 2 cut(s) 902, 1598
Cac8I GCNNGC 3 cut(s) 467, 1344, 1835
CciI TCATGA 3 cut(s) 118, 1111, 1311
CfoI GCGC 3 cut(s) 675, 1459, 1759
Cfr13I GGNCC 2 cut(s) 823, 1949
CseI GACGC 3 cut(s) 102, 184, 458
CsiI ACCWGGT 1 cut(s) 1621
Csp6I GTAC 4 cut(s) 655, 1499, 1700, 1990
CspCI CAANNNNNGTGG 2 cut(s) 526, 561
CviQI GTAC 4 cut(s) 655, 1499, 1700, 1990
DdeI CTNAG 2 cut(s) 248, 1033
DpnI GATC 6 cut(s) 60, 123, 261, 1042, 1770, 1937
DpnII GATC 6 cut(s) 58, 121, 259, 1040, 1768, 1935
DraI TTTAAA 1 cut(s) 1327
EaeI YGGCCR 2 cut(s) 1668, 1713
Eam1104I CTCTTC 4 cut(s) 591, 1122, 1569, 1691
EarI CTCTTC 4 cut(s) 591, 1122, 1569, 1691
Eco130I CCWWGG 2 cut(s) 1839, 1945
Eco47I GGWCC 1 cut(s) 823
Eco57I CTGAAG 1 cut(s) 561
Eco91I GGTNACC 1 cut(s) 895
EcoO109I RGGNCCY 1 cut(s) 823
EcoO65I GGTNACC 1 cut(s) 895
EcoRII CCWGG 4 cut(s) 711, 1147, 1569, 1621
EcoT14I CCWWGG 2 cut(s) 1839, 1945
ErhI CCWWGG 2 cut(s) 1839, 1945
Esp3I CGTCTC 1 cut(s) 120
FalI AAGNNNNNCTT 2 cut(s) 830, 862
FauI CCCGC 1 cut(s) 474
FauNDI CATATG 1 cut(s) 619
FbaI TGATCA 1 cut(s) 121
Fnu4HI GCNGC 6 cut(s) 519, 996, 1098, 1200, 1578, 1605
FokI GGATG 3 cut(s) 304, 728, 1774
Fsp4HI GCNGC 6 cut(s) 519, 996, 1098, 1200, 1578, 1605
FspBI CTAG 7 cut(s) 80, 434, 440, 582, 1347, 1395, 1529
GlaI GCGC 3 cut(s) 674, 1458, 1758
GluI GCNGC 6 cut(s) 519, 996, 1098, 1200, 1578, 1605
GsuI CTGGAG 2 cut(s) 362, 795
HaeII RGCGCY 2 cut(s) 676, 1460
HaeIII GGCC 3 cut(s) 1670, 1715, 1950
HapII CCGG 1 cut(s) 289
HgaI GACGC 3 cut(s) 102, 184, 458
HhaI GCGC 3 cut(s) 675, 1459, 1759
Hin1I GRCGYC 1 cut(s) 195
Hin6I GCGC 3 cut(s) 673, 1457, 1757
HinP1I GCGC 3 cut(s) 673, 1457, 1757
HincII GTYRAC 3 cut(s) 30, 105, 1558
HindII GTYRAC 3 cut(s) 30, 105, 1558
HinfI GANTC 5 cut(s) 221, 295, 398, 851, 1493
HpaII CCGG 1 cut(s) 289
HphI GGTGA 6 cut(s) 290, 712, 907, 1429, 1778, 2009
Hpy166II GTNNAC 8 cut(s) 30, 105, 164, 703, 1282, 1449, 1501, 1558
Hpy188I TCNGA 3 cut(s) 259, 501, 1182
Hpy8I GTNNAC 8 cut(s) 30, 105, 164, 703, 1282, 1449, 1501, 1558
HpyAV CCTTC 3 cut(s) 439, 662, 1010
HpyCH4III ACNGT 4 cut(s) 161, 588, 1518, 1971
HpyCH4IV ACGT 6 cut(s) 376, 1185, 1554, 1598, 1956, 1977
HpyF10VI GCNNNNNNNGC 5 cut(s) 557, 887, 1586, 1667, 1813
HpyF3I CTNAG 2 cut(s) 248, 1033
HpySE526I ACGT 6 cut(s) 376, 1185, 1554, 1598, 1956, 1977
Hsp92I GRCGYC 1 cut(s) 195
HspAI GCGC 3 cut(s) 673, 1457, 1757
Kpn2I TCCGGA 1 cut(s) 288
Ksp22I TGATCA 1 cut(s) 121
Kzo9I GATC 6 cut(s) 58, 121, 259, 1040, 1768, 1935
LmnI GCTCC 3 cut(s) 481, 724, 1648
Lsp1109I GCAGC 5 cut(s) 1007, 1084, 1211, 1564, 1591
LweI GCATC 3 cut(s) 100, 706, 1309
MabI ACCWGGT 1 cut(s) 1621
MaeI CTAG 7 cut(s) 80, 434, 440, 582, 1347, 1395, 1529
MaeII ACGT 6 cut(s) 376, 1185, 1554, 1598, 1956, 1977
MaeIII GTNAC 8 cut(s) 196, 418, 565, 858, 895, 1861, 1997, 2008
MalI GATC 6 cut(s) 60, 123, 261, 1042, 1770, 1937
MboI GATC 6 cut(s) 58, 121, 259, 1040, 1768, 1935
MflI RGATCY 1 cut(s) 259
MhlI GDGCHC 1 cut(s) 1779
MlsI TGGCCA 2 cut(s) 1670, 1715
MluCI AATT 8 cut(s) 87, 363, 402, 798, 1086, 1214, 1239, 2034
MluNI TGGCCA 2 cut(s) 1670, 1715
MlyI GAGTC 1 cut(s) 860
MmeI TCCRAC 3 cut(s) 237, 956, 1703
MnlI CCTC 9 cut(s) 55, 85, 179, 295, 541, 1040, 1408, 1437, 1962
Mox20I TGGCCA 2 cut(s) 1670, 1715
MroI TCCGGA 1 cut(s) 288
MscI TGGCCA 2 cut(s) 1670, 1715
MseI TTAA 8 cut(s) 828, 1167, 1242, 1326, 1388, 1508, 1632, 2083
MslI CAYNNNNRTG 1 cut(s) 1263
Msp20I TGGCCA 2 cut(s) 1670, 1715
MspA1I CMGCKG 1 cut(s) 1097
MspCI CTTAAG 1 cut(s) 1387
MspI CCGG 1 cut(s) 289
MspR9I CCNGG 4 cut(s) 713, 1149, 1571, 1623
Mva1269I GAATGC 2 cut(s) 467, 1844
MvaI CCWGG 4 cut(s) 713, 1149, 1571, 1623
MvnI CGCG 2 cut(s) 469, 662
MwoI GCNNNNNNNGC 5 cut(s) 557, 887, 1586, 1667, 1813
NdeI CATATG 1 cut(s) 619
NdeII GATC 6 cut(s) 58, 121, 259, 1040, 1768, 1935
NmeAIII GCCGAG 1 cut(s) 1432
NmuCI GTSAC 5 cut(s) 196, 895, 1861, 1997, 2008
NspI RCATGY 6 cut(s) 515, 887, 1234, 1799, 1837, 1880
NspV TTCGAA 2 cut(s) 1226, 1491
PaeI GCATGC 1 cut(s) 1837
PagI TCATGA 3 cut(s) 118, 1111, 1311
PaqCI CACCTGC 1 cut(s) 902
PciI ACATGT 4 cut(s) 511, 883, 1230, 1795
PctI GAATGC 2 cut(s) 467, 1844
PfeI GAWTC 4 cut(s) 221, 295, 398, 1493
PflMI CCANNNNNTGG 1 cut(s) 1338
PkrI GCNGC 6 cut(s) 520, 997, 1099, 1201, 1579, 1606
PleI GAGTC 1 cut(s) 859
PpsI GAGTC 1 cut(s) 859
Ppu21I YACGTR 1 cut(s) 377
PpuMI RGGWCCY 1 cut(s) 823
PscI ACATGT 4 cut(s) 511, 883, 1230, 1795
PshBI ATTAAT 1 cut(s) 1242
PsiI TTATAA 1 cut(s) 1136
Psp1406I AACGTT 1 cut(s) 1185
Psp5II RGGWCCY 1 cut(s) 823
Psp6I CCWGG 4 cut(s) 711, 1147, 1569, 1621
PspEI GGTNACC 1 cut(s) 895
PspGI CCWGG 4 cut(s) 711, 1147, 1569, 1621
PspPI GGNCC 2 cut(s) 823, 1949
PspPPI RGGWCCY 1 cut(s) 823
PsrI GAACNNNNNNTAC 2 cut(s) 122, 154
PstI CTGCAG 3 cut(s) 1102, 1609, 1870
PsuI RGATCY 1 cut(s) 259
PvuII CAGCTG 1 cut(s) 1097
RsaI GTAC 4 cut(s) 656, 1500, 1701, 1991
RsaNI GTAC 4 cut(s) 655, 1499, 1700, 1990
RseI CAYNNNNRTG 1 cut(s) 1263
SaqAI TTAA 8 cut(s) 828, 1167, 1242, 1326, 1388, 1508, 1632, 2083
SatI GCNGC 6 cut(s) 519, 996, 1098, 1200, 1578, 1605
Sau3AI GATC 6 cut(s) 58, 121, 259, 1040, 1768, 1935
Sau96I GGNCC 2 cut(s) 823, 1949
SchI GAGTC 1 cut(s) 860
ScrFI CCNGG 4 cut(s) 713, 1149, 1571, 1623
SduI GDGCHC 1 cut(s) 1779
SexAI ACCWGGT 1 cut(s) 1621
SfaNI GCATC 3 cut(s) 100, 706, 1309
SfcI CTRYAG 3 cut(s) 1098, 1605, 1866
SfuI TTCGAA 2 cut(s) 1226, 1491
SinI GGWCC 1 cut(s) 823
SmiMI CAYNNNNRTG 1 cut(s) 1263
SmlI CTYRAG 5 cut(s) 74, 490, 626, 1387, 1480
SmoI CTYRAG 5 cut(s) 74, 490, 626, 1387, 1480
SpeI ACTAGT 1 cut(s) 439
SphI GCATGC 1 cut(s) 1837
Sse9I AATT 8 cut(s) 87, 363, 402, 798, 1086, 1214, 1239, 2034
SsiI CCGC 7 cut(s) 183, 467, 495, 506, 518, 528, 1372
SspI AATATT 1 cut(s) 1120
SspMI CTAG 7 cut(s) 80, 434, 440, 582, 1347, 1395, 1529
StyD4I CCNGG 4 cut(s) 711, 1147, 1569, 1621
StyI CCWWGG 2 cut(s) 1839, 1945
TaaI ACNGT 4 cut(s) 161, 588, 1518, 1971
TaiI ACGT 6 cut(s) 379, 1188, 1557, 1601, 1959, 1980
TaqI TCGA 3 cut(s) 681, 1226, 1491
TasI AATT 8 cut(s) 87, 363, 402, 798, 1086, 1214, 1239, 2034
TatI WGTACW 2 cut(s) 654, 1498
TauI GCSGC 1 cut(s) 521
TfiI GAWTC 4 cut(s) 221, 295, 398, 1493
Tru1I TTAA 8 cut(s) 828, 1167, 1242, 1326, 1388, 1508, 1632, 2083
Tru9I TTAA 8 cut(s) 828, 1167, 1242, 1326, 1388, 1508, 1632, 2083
TscAI CASTG 5 cut(s) 375, 1458, 1527, 1779, 1870
TseFI GTSAC 5 cut(s) 196, 895, 1861, 1997, 2008
TseI GCWGC 5 cut(s) 995, 1097, 1199, 1577, 1604
Tsp45I GTSAC 5 cut(s) 196, 895, 1861, 1997, 2008
TspGWI ACGGA 3 cut(s) 263, 1268, 1717
TspRI CASTG 5 cut(s) 375, 1458, 1527, 1779, 1870
Van91I CCANNNNNTGG 1 cut(s) 1338
Vha464I CTTAAG 1 cut(s) 1387
VpaK11BI GGWCC 1 cut(s) 823
VspI ATTAAT 1 cut(s) 1242
XapI RAATTY 2 cut(s) 363, 1214
XbaI TCTAGA 1 cut(s) 433
XceI RCATGY 6 cut(s) 515, 887, 1234, 1799, 1837, 1880
XspI CTAG 7 cut(s) 80, 434, 440, 582, 1347, 1395, 1529
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.