Rh5CG312600

ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
OG0000494
Physical Location & Seq
Forward (+)
34478574 .. 34487532
8959 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5CG312600.1

Sequence Viewer

Length: 2007 bp
ATGCATCAAAATCAAATCCAGGACAGTCATCTAACCGATCACTCAAAATTGTACCATCAGTTGTACAGGTATGCTAGTGAGGGAAGGCAAACTGACTTTATCACAGCTATTCAGAGGGTTGCAAATTGTGATAAAAATGCTTCGATTCAGCTCCTGTCCCGACTGAGCCCGCTGAATAACTCATTTCTTCACACAGCAGTGTCTTTCAGCCATGTAAGTCTAGCCATCAAGATCATGAAGCTTCACCCGCCACTTTTGTTGGTTAAAAACTTTGAAGGTGACACTGCACTCCACGTTGCGGCCAAAACCAGAGGGGGTGATGATAATATGATAAGATGCATTATGGAGCATGTGAATCTGGATTCCGGTGAAGGTCAAGCAACGGACATTGAAAATGTTGATGTATCAGTGTTCAGAATGAAAAATGATGAGGAAAATACTCCCTTGCATGAGGCCCTGATAAATGGTAATCACTTGGAGGCAAAGTATTTGATCAAGGCTGATCCTTCAGTTTCATTTTTTGCTAACAAGGAGAGAAAGTCCCCTTTGTATCTAGCTGCAGAAGCTGGGCTCGTTGAAATTGTGAAGCTAATAAATGACACTACTGCAGTTCAGAATAACACAGGTGATCAAGGTAATGGGGTGCCGCCTATGAACTTGGTGATGGAGGGCAAGTCCCCGTTGCATGCTGCGATTCTCAGCAAGAAGGAAGATGTCCTAGGCATAATATCAAGAATGCGATTTACCGTAGAGCATTTAGAAGAGGAGAAAGGGAGGACTCCACTTCATTGTGCAGCATCAACAGGTTATCTCGAAGGGCTTCGCTTCCTATTAAAAAGATGTTTATCCGATTCTCATCGAGCAGATAGTGGTGGCACCTTTCCAATTCATTCTGCATCAAGCAAAGGTCATGTTCCTATAGTTAAGCTGCTTCTTGAACATTATCCCGATTTAAAGGAATTGAGGAACTCGAGTGGAGAAAACATTCTTCATGTTGCAGCAAAGTGTGGCAGGGACAATCTTGTGAAATATTTTCTCGAGAAAGGTGAATTTAAGATGTTGATAAACCAAAAAAACAGAGCTGGAAATACTCCTTTACATTTGGCTTCAATTTACCAACATCCAGCAGTTGTGAACATCCTGACTTGGGATAAAAGGACCAATTTGAAGCTCTTGAATGTAAGAGGCATGACAGCTCTTGATATTGCAGAAAATACTCTGGAAACTACTGCATCGTTCCACGGGAGGCTAGCATGGATAGCACTGAAATCAGCGGGTGCACAGCAAGCTCAAAGTTCGAATATTCCACAAAGGAAAACAGGACAGAATACACAGCAAGAGTTGTTAGTTTCAGCAACTAAACCACTAGGAGGCAACGGTGGAGATGTCAGAACTAAAATTGAAGATGCTACGGACAGAGTTATAAATTCTTGTAACAATATTCAGCTAGTGTTACCAAACAAGCAAAGCATTAATAAGGACACAGTCAATACTCTTTTGGTGGTGACTACACTCATTGCCACAGTGTCGTTTGCAGCTGGTTTCACAATGCCAGGCGGCTACAATAACTCCGGCCCTCATGAGGGCACGGCAACTTTGCTAAATAAAGAAATGTTCCAAGTCTTCGTGATCTGCAACACACTTGCTATGTATAATTCTGTCCTTGTTGCAATCACTCTCATTTGGGCACAACTAGGGGATTTAAGCTTGGTGCCTCTTCGTATAGCATTGCCACTGTTGGGGCTCGCGCTTACAATGCTGTCCTTAGCATTCATGGCTGGAGTTTTTGTAGTAGTTAGTAGTCTTCAGTGGCTAGCTAGCGTTGTGATGATCATGGGTGTAGTTTTCCTTTTCACCGTGATAGCACTATTCACTCCACTCTTCTTCCCTTCCAAACTGTTCCCAACTACCTCCACTTTCCGTGTACGTCGTTACATCATCTATTATCCTTTCCGTTTGGCAGTACTGGTTTCTGGAAGTCACAAAGACTTTGAAGAAGAAGACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04310 map04310
Pfam Domains
Protein Families
Ank Ank_2 Ank_4 PGG

Protein Analysis

668

Amino Acids

73.71

Weight (kDa)

8.3

Isoelectric Point (pI)

31.41

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 140 - 199 1.4e-07 Ankyrin repeats (3 copies)
Ank_2 PF12796 220 - 279 1.8e-06 Ankyrin repeats (3 copies)
Ank_2 PF12796 289 - 350 1.9e-10 Ankyrin repeats (3 copies)
Ank_4 PF13637 296 - 346 2.5e-06 Ankyrin repeats (many copies)
Ank_2 PF12796 321 - 385 7.1e-10 Ankyrin repeats (3 copies)
Ank_5 PF13857 353 - 403 1.5e-06 Ankyrin repeats (many copies)
PGG PF13962 492 - 598 7.2e-29 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000494)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G03670 AT4G03440 AT4G03440 AT4G03440 AT4G03450 AT4G03450 AT4G03460 AT4G03460 AT4G03470 AT4G03480 AT4G03480 AT4G03490 AT4G03490 AT4G03490 AT4G03490 AT4G03490 AT4G03500 AT4G03500 AT4G03500 AT4G03505 AT4G05040 AT4G05040 AT4G05040 AT4G05040 AT4G05040 AT4G05040 AT4G05040 AT4G14390 AT4G14390 AT4G14390 AT4G14390 AT4G14400 AT4G14400 AT4G14400
fragaria_vesca FvH4_3g05910 FvH4_3g23320
malus_domestica MD03G1094000.v1.1 MD03G1094200.v1.1 MD03G1094600.v1.1 MD12G1218700.v1.1
prunus_persica Prupe.3G135100_v2.0.a1 Prupe.3G135200_v2.0.a1 Prupe.3G135700_v2.0.a1 Prupe.3G135700_v2.0.a1 Prupe.3G142400_v2.0.a1 Prupe.3G153800_v2.0.a1 Prupe.3G153800_v2.0.a1 Prupe.3G153800_v2.0.a1 Prupe.3G153800_v2.0.a1 Prupe.3G154000_v2.0.a1 Prupe.3G154200_v2.0.a1 Prupe.3G154200_v2.0.a1 Prupe.3G154600_v2.0.a1 Prupe.3G154700_v2.0.a1 Prupe.3G155200_v2.0.a1 Prupe.3G155300_v2.0.a1 Prupe.8G110300_v2.0.a1
pyrus_communis pycom03g07280 pycom03g07580 pycom03g07660 pycom03g07700 pycom03g07710
rosa_chinensis RchiOBHm_Chr3g0461161 RchiOBHm_Chr5g0041111
rosa_laevigata RLG00000023472 RLG00000023475 RLG00000034025
rosa_multiflora Rmu_co8126040.1_g000001 Rmu_co8268563.1_g000001 Rmu_sc0000964.1_g000014 Rmu_sc0028923.1_g000001 Rmu_sc0042194.1_g000001
rosa_roxburghii Rroxscaffold_1G00039610 Rroxscaffold_6G00401360
rosa_rugosa Rorug03G0048600 Rorug03G0048700 Rorug05G0190000
rosa_samantha Rh3AG105900 Rh3BG110200 Rh3BG268400 Rh3CG111800 Rh3DG111900 Rh5AG275800 Rh5BG280500 Rh5CG312600 Rh5DG288800
rosa_wichuraiana Rw3G009080 Rw5G025920

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1424
AccB1I GGYRCC 3 cut(s) 643, 875, 1711
AccII CGCG 1 cut(s) 1748
AciI CCGC 6 cut(s) 170, 248, 299, 647, 1274, 1557
AclWI GGATC 1 cut(s) 497
AcoI YGGCCR 1 cut(s) 300
AcsI RAATTY 2 cut(s) 1049, 1426
AcuI CTGAAG 2 cut(s) 492, 1790
AfaI GTAC 4 cut(s) 53, 65, 1926, 1965
AfiI CCNNNNNNNGG 6 cut(s) 298, 1147, 1370, 1582, 1583, 1739
AgsI TTSAA 9 cut(s) 275, 392, 578, 938, 1110, 1168, 1177, 1403, 1994
AjnI CCWGG 2 cut(s) 18, 1552
AleI CACNNNNGTG 1 cut(s) 197
Alw21I GWGCWC 1 cut(s) 1282
Alw44I GTGCAC 1 cut(s) 1278
AlwI GGATC 1 cut(s) 497
AlwNI CAGNNNCTG 2 cut(s) 154, 566
Ama87I CYCGRG 2 cut(s) 970, 1037
AoxI GGCC 3 cut(s) 300, 453, 1573
ApaLI GTGCAC 1 cut(s) 1278
ApeKI GCWGC 6 cut(s) 557, 689, 794, 928, 998, 1535
ApoI RAATTY 2 cut(s) 1049, 1426
AseI ATTAAT 1 cut(s) 1473
Asp700I GAANNNNTTC 2 cut(s) 819, 984
AspA2I CCTAGG 1 cut(s) 718
AspLEI GCGC 1 cut(s) 1750
AspS9I GGNCC 3 cut(s) 454, 1158, 1574
AsuHPI GGTGA 9 cut(s) 236, 290, 329, 380, 638, 673, 1058, 1516, 1846
AsuII TTCGAA 1 cut(s) 1298
AsuNHI GCTAGC 3 cut(s) 1249, 1813, 1817
AvaI CYCGRG 2 cut(s) 970, 1037
AvaII GGWCC 1 cut(s) 1158
AvrII CCTAGG 1 cut(s) 718
BaeGI GKGCMC 3 cut(s) 1282, 1589, 1690
BanI GGYRCC 3 cut(s) 643, 875, 1711
BanII GRGCYC 3 cut(s) 170, 573, 1746
BbsI GAAGAC 2 cut(s) 1615, 1796
Bbv12I GWGCWC 1 cut(s) 1282
BbvI GCAGC 6 cut(s) 544, 676, 806, 915, 1010, 1547
BccI CCATC 3 cut(s) 63, 233, 658
BceAI ACGGC 1 cut(s) 1605
BciT130I CCWGG 2 cut(s) 20, 1554
BclI TGATCA 3 cut(s) 492, 628, 1830
BfmI CTRYAG 3 cut(s) 558, 606, 918
BisI GCNGC 9 cut(s) 300, 558, 647, 690, 795, 929, 999, 1536, 1558
BlnI CCTAGG 1 cut(s) 718
BlsI GCNGC 9 cut(s) 301, 559, 648, 691, 796, 930, 1000, 1537, 1559
BmcAI AGTACT 1 cut(s) 1965
Bme1390I CCNGG 2 cut(s) 20, 1554
Bme18I GGWCC 1 cut(s) 1158
BmeT110I CYCGRG 2 cut(s) 970, 1037
BmgT120I GGNCC 3 cut(s) 454, 1158, 1574
BmiI GGNNCC 3 cut(s) 645, 877, 1713
BmrFI CCNGG 2 cut(s) 20, 1554
BmsI GCATC 6 cut(s) 13, 326, 806, 905, 1241, 1396
BmtI GCTAGC 3 cut(s) 1253, 1817, 1821
BpiI GAAGAC 2 cut(s) 1615, 1796
BpmI CTGGAG 1 cut(s) 1800
Bpu10I CCTNAGC 1 cut(s) 1765
Bpu14I TTCGAA 1 cut(s) 1298
BsaBI GATNNNNATC 2 cut(s) 844, 855
BsaJI CCNNGG 2 cut(s) 718, 1240
BsaWI WCCGGW 1 cut(s) 365
Bsc4I CCNNNNNNNGG 6 cut(s) 298, 1147, 1370, 1582, 1583, 1739
Bse1I ACTGG 1 cut(s) 1971
Bse3DI GCAATG 2 cut(s) 1515, 1727
Bse8I GATNNNNATC 2 cut(s) 844, 855
BseBI CCWGG 2 cut(s) 20, 1554
BseDI CCNNGG 2 cut(s) 718, 1240
BseGI GGATG 2 cut(s) 1120, 1137
BseJI GATNNNNATC 2 cut(s) 844, 855
BseLI CCNNNNNNNGG 6 cut(s) 298, 1147, 1370, 1582, 1583, 1739
BseMI GCAATG 2 cut(s) 1515, 1727
BseMII CTCAG 2 cut(s) 155, 712
BseNI ACTGG 1 cut(s) 1971
BseRI GAGGAG 1 cut(s) 779
BseSI GKGCMC 3 cut(s) 1282, 1589, 1690
BseXI GCAGC 6 cut(s) 544, 676, 806, 915, 1010, 1547
BseYI CCCAGC 1 cut(s) 566
BsgI GTGCAG 2 cut(s) 270, 813
Bsh1236I CGCG 1 cut(s) 1748
BshFI GGCC 3 cut(s) 302, 455, 1575
BshNI GGYRCC 3 cut(s) 643, 875, 1711
BsiHKAI GWGCWC 1 cut(s) 1282
BsiHKCI CYCGRG 2 cut(s) 970, 1037
BsiSI CCGG 2 cut(s) 366, 1572
BslFI GGGAC 4 cut(s) 142, 526, 661, 1028
BslI CCNNNNNNNGG 6 cut(s) 298, 1147, 1370, 1582, 1583, 1739
BsmFI GGGAC 4 cut(s) 142, 526, 661, 1028
BsmI GAATGC 2 cut(s) 741, 1769
BsnI GGCC 3 cut(s) 302, 455, 1575
BsoBI CYCGRG 2 cut(s) 970, 1037
Bsp119I TTCGAA 1 cut(s) 1298
Bsp1286I GDGCHC 6 cut(s) 170, 573, 1282, 1589, 1690, 1746
Bsp1407I TGTACA 1 cut(s) 63
Bsp143I GATC 7 cut(s) 37, 231, 492, 502, 628, 1629, 1830
BspACI CCGC 6 cut(s) 170, 248, 299, 647, 1274, 1557
BspANI GGCC 3 cut(s) 302, 455, 1575
BspCNI CTCAG 2 cut(s) 156, 711
BspFNI CGCG 1 cut(s) 1748
BspHI TCATGA 2 cut(s) 234, 1579
BspLI GGNNCC 3 cut(s) 645, 877, 1713
BspMAI CTGCAG 2 cut(s) 562, 610
BspOI GCTAGC 3 cut(s) 1253, 1817, 1821
BspPI GGATC 1 cut(s) 497
BspT104I TTCGAA 1 cut(s) 1298
BspT107I GGYRCC 3 cut(s) 643, 875, 1711
BsrDI GCAATG 2 cut(s) 1515, 1727
BsrGI TGTACA 1 cut(s) 63
BsrI ACTGG 1 cut(s) 1971
BssECI CCNNGG 2 cut(s) 718, 1240
BssMI GATC 7 cut(s) 37, 231, 492, 502, 628, 1629, 1830
BssT1I CCWWGG 1 cut(s) 718
Bst2UI CCWGG 2 cut(s) 20, 1554
Bst4CI ACNGT 8 cut(s) 26, 748, 1379, 1486, 1525, 1737, 1858, 1899
Bst6I CTCTTC 3 cut(s) 756, 1722, 1886
BstAUI TGTACA 1 cut(s) 63
BstBI TTCGAA 1 cut(s) 1298
BstC8I GCNNGC 7 cut(s) 170, 687, 1251, 1287, 1746, 1815, 1819
BstDEI CTNAG 3 cut(s) 164, 698, 1765
BstDSI CCRYGG 1 cut(s) 1240
BstF5I GGATG 2 cut(s) 1120, 1137
BstFNI CGCG 1 cut(s) 1748
BstHHI GCGC 1 cut(s) 1750
BstKTI GATC 7 cut(s) 40, 234, 495, 505, 631, 1632, 1833
BstMBI GATC 7 cut(s) 37, 231, 492, 502, 628, 1629, 1830
BstMWI GCNNNNNNNGC 6 cut(s) 247, 563, 1259, 1286, 1756, 1775
BstNI CCWGG 2 cut(s) 20, 1554
BstNSI RCATGY 2 cut(s) 353, 689
BstSCI CCNGG 2 cut(s) 18, 1552
BstSFI CTRYAG 3 cut(s) 558, 606, 918
BstSLI GKGCMC 3 cut(s) 1282, 1589, 1690
BstUI CGCG 1 cut(s) 1748
BstV1I GCAGC 6 cut(s) 544, 676, 806, 915, 1010, 1547
BstV2I GAAGAC 2 cut(s) 1615, 1796
BsuRI GGCC 3 cut(s) 302, 455, 1575
BtgI CCRYGG 1 cut(s) 1240
BtsCI GGATG 2 cut(s) 1120, 1137
BtsI GCAGTG 2 cut(s) 204, 282
BtsIMutI CAGTG 7 cut(s) 204, 282, 414, 1262, 1530, 1733, 1814
Cac8I GCNNGC 7 cut(s) 170, 687, 1251, 1287, 1746, 1815, 1819
CaiI CAGNNNCTG 2 cut(s) 154, 566
CciI TCATGA 2 cut(s) 234, 1579
CfoI GCGC 1 cut(s) 1750
Cfr13I GGNCC 3 cut(s) 454, 1158, 1574
Csp6I GTAC 4 cut(s) 52, 64, 1925, 1964
CspCI CAANNNNNGTGG 2 cut(s) 240, 275
CviQI GTAC 4 cut(s) 52, 64, 1925, 1964
DdeI CTNAG 3 cut(s) 164, 698, 1765
DpnI GATC 7 cut(s) 39, 233, 494, 504, 630, 1631, 1832
DpnII GATC 7 cut(s) 37, 231, 492, 502, 628, 1629, 1830
DraI TTTAAA 1 cut(s) 954
EaeI YGGCCR 1 cut(s) 300
Eam1104I CTCTTC 3 cut(s) 756, 1722, 1886
EarI CTCTTC 3 cut(s) 756, 1722, 1886
Eco130I CCWWGG 1 cut(s) 718
Eco24I GRGCYC 3 cut(s) 170, 573, 1746
Eco47I GGWCC 1 cut(s) 1158
Eco57I CTGAAG 2 cut(s) 492, 1790
Eco88I CYCGRG 2 cut(s) 970, 1037
EcoO109I RGGNCCY 1 cut(s) 454
EcoRII CCWGG 2 cut(s) 18, 1552
EcoT14I CCWWGG 1 cut(s) 718
EcoT22I ATGCAT 2 cut(s) 6, 341
EcoT38I GRGCYC 3 cut(s) 170, 573, 1746
ErhI CCWWGG 1 cut(s) 718
FaqI GGGAC 4 cut(s) 142, 526, 661, 1028
FauI CCCGC 3 cut(s) 177, 255, 1267
FbaI TGATCA 3 cut(s) 492, 628, 1830
Fnu4HI GCNGC 9 cut(s) 300, 558, 647, 690, 795, 929, 999, 1536, 1558
FokI GGATG 2 cut(s) 1107, 1124
FriOI GRGCYC 3 cut(s) 170, 573, 1746
Fsp4HI GCNGC 9 cut(s) 300, 558, 647, 690, 795, 929, 999, 1536, 1558
GlaI GCGC 1 cut(s) 1749
GluI GCNGC 9 cut(s) 300, 558, 647, 690, 795, 929, 999, 1536, 1558
GsaI CCCAGC 1 cut(s) 570
GsuI CTGGAG 1 cut(s) 1800
HaeIII GGCC 3 cut(s) 302, 455, 1575
HapII CCGG 2 cut(s) 366, 1572
HhaI GCGC 1 cut(s) 1750
Hin6I GCGC 1 cut(s) 1748
HinP1I GCGC 1 cut(s) 1748
HindIII AAGCTT 2 cut(s) 239, 1705
HinfI GANTC 6 cut(s) 145, 355, 362, 694, 778, 851
HpaII CCGG 2 cut(s) 366, 1572
HphI GGTGA 9 cut(s) 236, 290, 329, 380, 638, 673, 1058, 1516, 1846
Hpy166II GTNNAC 3 cut(s) 1135, 1280, 1925
Hpy188I TCNGA 5 cut(s) 114, 416, 615, 850, 1391
Hpy8I GTNNAC 3 cut(s) 1135, 1280, 1925
Hpy99I CGWCG 1 cut(s) 1932
HpyAV CCTTC 7 cut(s) 78, 269, 365, 516, 700, 809, 1899
HpyCH4III ACNGT 8 cut(s) 26, 748, 1379, 1486, 1525, 1737, 1858, 1899
HpyCH4IV ACGT 2 cut(s) 294, 1927
HpyF10VI GCNNNNNNNGC 6 cut(s) 247, 563, 1259, 1286, 1756, 1775
HpyF3I CTNAG 3 cut(s) 164, 698, 1765
HpySE526I ACGT 2 cut(s) 294, 1927
HspAI GCGC 1 cut(s) 1748
Ksp22I TGATCA 3 cut(s) 492, 628, 1830
Kzo9I GATC 7 cut(s) 37, 231, 492, 502, 628, 1629, 1830
LmnI GCTCC 2 cut(s) 156, 346
Lsp1109I GCAGC 6 cut(s) 544, 676, 806, 915, 1010, 1547
LweI GCATC 6 cut(s) 13, 326, 806, 905, 1241, 1396
MaeII ACGT 2 cut(s) 294, 1927
MaeIII GTNAC 6 cut(s) 278, 1433, 1452, 1504, 1931, 1979
MalI GATC 7 cut(s) 39, 233, 494, 504, 630, 1631, 1832
MboI GATC 7 cut(s) 37, 231, 492, 502, 628, 1629, 1830
MhlI GDGCHC 6 cut(s) 170, 573, 1282, 1589, 1690, 1746
MlyI GAGTC 1 cut(s) 772
Mph1103I ATGCAT 2 cut(s) 6, 341
MroXI GAANNNNTTC 2 cut(s) 819, 984
MseI TTAA 7 cut(s) 264, 833, 924, 953, 1053, 1473, 1703
MslI CAYNNNNRTG 1 cut(s) 197
MspA1I CMGCKG 3 cut(s) 172, 1274, 1538
MspI CCGG 2 cut(s) 366, 1572
MspR9I CCNGG 2 cut(s) 20, 1554
Mva1269I GAATGC 2 cut(s) 741, 1769
MvaI CCWGG 2 cut(s) 20, 1554
MvnI CGCG 1 cut(s) 1748
MwoI GCNNNNNNNGC 6 cut(s) 247, 563, 1259, 1286, 1756, 1775
NdeII GATC 7 cut(s) 37, 231, 492, 502, 628, 1629, 1830
NheI GCTAGC 3 cut(s) 1249, 1813, 1817
NlaIV GGNNCC 3 cut(s) 645, 877, 1713
NmuCI GTSAC 3 cut(s) 278, 1504, 1979
NsiI ATGCAT 2 cut(s) 6, 341
NspI RCATGY 2 cut(s) 353, 689
NspV TTCGAA 1 cut(s) 1298
OliI CACNNNNGTG 1 cut(s) 197
PaeI GCATGC 1 cut(s) 689
PaeR7I CTCGAG 2 cut(s) 970, 1037
PagI TCATGA 2 cut(s) 234, 1579
PctI GAATGC 2 cut(s) 741, 1769
PdmI GAANNNNTTC 2 cut(s) 819, 984
PfeI GAWTC 5 cut(s) 145, 355, 362, 694, 851
PflFI GACNNNGTC 1 cut(s) 1484
PfoI TCCNGGA 1 cut(s) 18
PkrI GCNGC 9 cut(s) 301, 559, 648, 691, 796, 930, 1000, 1537, 1559
PleI GAGTC 1 cut(s) 772
PpsI GAGTC 1 cut(s) 772
PshBI ATTAAT 1 cut(s) 1473
PsiI TTATAA 1 cut(s) 1424
Psp6I CCWGG 2 cut(s) 18, 1552
PspFI CCCAGC 1 cut(s) 566
PspGI CCWGG 2 cut(s) 18, 1552
PspN4I GGNNCC 3 cut(s) 645, 877, 1713
PspPI GGNCC 3 cut(s) 454, 1158, 1574
PspXI VCTCGAGB 1 cut(s) 970
PstI CTGCAG 2 cut(s) 562, 610
PstNI CAGNNNCTG 2 cut(s) 154, 566
PsyI GACNNNGTC 1 cut(s) 1484
PvuII CAGCTG 1 cut(s) 1538
RsaI GTAC 4 cut(s) 53, 65, 1926, 1965
RsaNI GTAC 4 cut(s) 52, 64, 1925, 1964
RseI CAYNNNNRTG 1 cut(s) 197
SaqAI TTAA 7 cut(s) 264, 833, 924, 953, 1053, 1473, 1703
SatI GCNGC 9 cut(s) 300, 558, 647, 690, 795, 929, 999, 1536, 1558
Sau3AI GATC 7 cut(s) 37, 231, 492, 502, 628, 1629, 1830
Sau96I GGNCC 3 cut(s) 454, 1158, 1574
ScaI AGTACT 1 cut(s) 1965
SchI GAGTC 1 cut(s) 772
ScrFI CCNGG 2 cut(s) 20, 1554
SduI GDGCHC 6 cut(s) 170, 573, 1282, 1589, 1690, 1746
SfaNI GCATC 6 cut(s) 13, 326, 806, 905, 1241, 1396
SfcI CTRYAG 3 cut(s) 558, 606, 918
Sfr274I CTCGAG 2 cut(s) 970, 1037
SfuI TTCGAA 1 cut(s) 1298
SinI GGWCC 1 cut(s) 1158
SlaI CTCGAG 2 cut(s) 970, 1037
SmiMI CAYNNNNRTG 1 cut(s) 197
SmlI CTYRAG 2 cut(s) 970, 1037
SmoI CTYRAG 2 cut(s) 970, 1037
SphI GCATGC 1 cut(s) 689
SsiI CCGC 6 cut(s) 170, 248, 299, 647, 1274, 1557
SspI AATATT 3 cut(s) 1031, 1303, 1441
StyD4I CCNGG 2 cut(s) 18, 1552
StyI CCWWGG 1 cut(s) 718
TaaI ACNGT 8 cut(s) 26, 748, 1379, 1486, 1525, 1737, 1858, 1899
TaiI ACGT 2 cut(s) 297, 1930
TaqI TCGA 6 cut(s) 143, 813, 859, 971, 1038, 1298
TatI WGTACW 2 cut(s) 63, 1963
TauI GCSGC 3 cut(s) 302, 649, 1560
TfiI GAWTC 5 cut(s) 145, 355, 362, 694, 851
Tru1I TTAA 7 cut(s) 264, 833, 924, 953, 1053, 1473, 1703
Tru9I TTAA 7 cut(s) 264, 833, 924, 953, 1053, 1473, 1703
TscAI CASTG 7 cut(s) 204, 289, 414, 1269, 1530, 1740, 1814
TseFI GTSAC 3 cut(s) 278, 1504, 1979
TseI GCWGC 6 cut(s) 557, 689, 794, 928, 998, 1535
Tsp45I GTSAC 3 cut(s) 278, 1504, 1979
TspDTI ATGAA 8 cut(s) 251, 434, 504, 668, 776, 878, 980, 1762
TspGWI ACGGA 4 cut(s) 398, 1427, 1910, 1943
TspRI CASTG 7 cut(s) 204, 289, 414, 1269, 1530, 1740, 1814
Tth111I GACNNNGTC 1 cut(s) 1484
VneI GTGCAC 1 cut(s) 1278
VpaK11BI GGWCC 1 cut(s) 1158
VspI ATTAAT 1 cut(s) 1473
XapI RAATTY 2 cut(s) 1049, 1426
XceI RCATGY 2 cut(s) 353, 689
XhoI CTCGAG 2 cut(s) 970, 1037
XmaJI CCTAGG 1 cut(s) 718
XmnI GAANNNNTTC 2 cut(s) 819, 984
ZrmI AGTACT 1 cut(s) 1965
Zsp2I ATGCAT 2 cut(s) 6, 341
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.