Prupe.3G154000_v2.0.a1

ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
OG0000494
Physical Location & Seq
Forward (+)
16940792 .. 16943293
2502 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G154000.1

Sequence Viewer

Length: 1077 bp
ATGGAAGCGCATCATGGAACACAGGACTTTGAAGAAACAGATGGTGATGCTGATAACTTGCGCTTGTACCAGCAGCTGTACAGCTATGCTATTCATGGCCAAACAAATAGATTTAACGACACTATTGCAAATGAGCTTCATGATCCCAATGCTCGCGTTCAGCTTCTGTCTCGACGGAGCCCCCAGAATAACACATTTGTTCACATAGCTGTGAGCTCCGGCCATGTCAAACTAGCAGCCAAGATCTTACAACAACACAAGCCCCTTTTGTTAGAGAAAAACTTTGAAGGTGACACCGCGCTCCACATTGCGGCCAAAGCCGGGGATATAGATACGACAACAAACACTCTTCTCCGTGAAGCACGAGGAACAACAAACGTTGAAAATAATGGTGATGTATTGACGTTGTTGAGGATGAAAAATAATGAGGAAAACACTGCCCTGCACGAGGCCCTGATTCGAGGTCACCAATCAGTAGCCAAGTGTTTGATAGATGCCGATCCTGCCGTTTCACTTTACACTAATAAGGAACAAAAGTCTCCTTTGTATTTGGCCGCTGAACAAGGGCTTGTTGAGATAGTGAAGCTAATAAAAGAAAAAGCAGTTGAGAAGAACATAGAAATTCAAGGCAAGTCCCCGTTATTTGCTGCAATTCTAGGCCGCCAGAAAAAAGAAGTCCTAAAGATAATATCCAATATGGAAGCAAATATTTTGAATTCAAAAGATGAGAAAGGGAGGACTCCACTACATTGTGCAGCATCAATTGGTTATCTAGAAGGAGTTCGCTTCTTAGGCAGACGTCTAGTGGATTCTCATCAAGAGGATCATTGTGGCAACTTTCCGATCCATTATGCATCAAGCAAAGGTCACGTCGACATTGTTAAGGAGTTGCTTCGATATTGTCCCGACTCAATGGAATTGAGGAACTCAAGTGACCAAAATATACTCCATGTTGCAGCAAGAAGTGGCAAGGACAATCTTGTCCAATATTTTCTCAAGAAGGTTGAGTTTCAAATGTTGATAAACCAAAAAGACAACAGAGGAAATACTCCTTTGCACTTGGCAAAGATGTACGAT
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank Ank_2 Ank_3 Ank_4 Ank_5 PGG

Protein Analysis

359

Amino Acids

40.31

Weight (kDa)

6.79

Isoelectric Point (pI)

39.73

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000494)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G03670 AT4G03440 AT4G03440 AT4G03440 AT4G03450 AT4G03450 AT4G03460 AT4G03460 AT4G03470 AT4G03480 AT4G03480 AT4G03490 AT4G03490 AT4G03490 AT4G03490 AT4G03490 AT4G03500 AT4G03500 AT4G03500 AT4G03505 AT4G05040 AT4G05040 AT4G05040 AT4G05040 AT4G05040 AT4G05040 AT4G05040 AT4G14390 AT4G14390 AT4G14390 AT4G14390 AT4G14400 AT4G14400 AT4G14400
fragaria_vesca FvH4_3g05910 FvH4_3g23320
malus_domestica MD03G1094000.v1.1 MD03G1094200.v1.1 MD03G1094600.v1.1 MD12G1218700.v1.1
prunus_persica Prupe.3G135100_v2.0.a1 Prupe.3G135200_v2.0.a1 Prupe.3G135700_v2.0.a1 Prupe.3G135700_v2.0.a1 Prupe.3G142400_v2.0.a1 Prupe.3G153800_v2.0.a1 Prupe.3G153800_v2.0.a1 Prupe.3G153800_v2.0.a1 Prupe.3G153800_v2.0.a1 Prupe.3G154000_v2.0.a1 Prupe.3G154200_v2.0.a1 Prupe.3G154200_v2.0.a1 Prupe.3G154600_v2.0.a1 Prupe.3G154700_v2.0.a1 Prupe.3G155200_v2.0.a1 Prupe.3G155300_v2.0.a1 Prupe.8G110300_v2.0.a1
pyrus_communis pycom03g07280 pycom03g07580 pycom03g07660 pycom03g07700 pycom03g07710
rosa_chinensis RchiOBHm_Chr3g0461161 RchiOBHm_Chr5g0041111
rosa_laevigata RLG00000023472 RLG00000023475 RLG00000034025
rosa_multiflora Rmu_co8126040.1_g000001 Rmu_co8268563.1_g000001 Rmu_sc0000964.1_g000014 Rmu_sc0028923.1_g000001 Rmu_sc0042194.1_g000001
rosa_roxburghii Rroxscaffold_1G00039610 Rroxscaffold_6G00401360
rosa_rugosa Rorug03G0048600 Rorug03G0048700 Rorug05G0190000
rosa_samantha Rh3AG105900 Rh3BG110200 Rh3BG268400 Rh3CG111800 Rh3DG111900 Rh5AG275800 Rh5BG280500 Rh5CG312600 Rh5DG288800
rosa_wichuraiana Rw3G009080 Rw5G025920

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 980
AatII GACGTC 1 cut(s) 802
AccI GTMKAC 1 cut(s) 873
AccII CGCG 2 cut(s) 156, 299
AciI CCGC 4 cut(s) 297, 311, 555, 661
AclI AACGTT 1 cut(s) 378
AclWI GGATC 4 cut(s) 137, 494, 831, 838
AcoI YGGCCR 4 cut(s) 97, 220, 312, 552
AcsI RAATTY 2 cut(s) 621, 715
AcyI GRCGYC 1 cut(s) 799
AfaI GTAC 3 cut(s) 68, 80, 1073
AfiI CCNNNNNNNGG 3 cut(s) 310, 321, 448
AgsI TTSAA 7 cut(s) 32, 287, 383, 626, 715, 720, 1013
AjiI CACGTC 1 cut(s) 871
AluBI AGCT 7 cut(s) 76, 84, 136, 163, 209, 216, 586
AluI AGCT 7 cut(s) 76, 84, 136, 163, 209, 216, 586
Alw21I GWGCWC 1 cut(s) 218
Alw26I GTCTC 2 cut(s) 174, 543
AlwI GGATC 4 cut(s) 137, 494, 831, 838
AlwNI CAGNNNCTG 2 cut(s) 76, 166
AoxI GGCC 6 cut(s) 97, 220, 312, 450, 552, 658
ApeKI GCWGC 5 cut(s) 73, 236, 647, 755, 956
ApoI RAATTY 2 cut(s) 621, 715
ArsI GACNNNNNNTTYG 2 cut(s) 855, 887
Asp700I GAANNNNTTC 1 cut(s) 780
AspLEI GCGC 3 cut(s) 10, 63, 301
AspS9I GGNCC 1 cut(s) 451
AsuC2I CCSGG 1 cut(s) 322
AsuHPI GGTGA 4 cut(s) 56, 302, 404, 458
BalI TGGCCA 1 cut(s) 99
BanII GRGCYC 2 cut(s) 182, 218
BauI CACGAG 2 cut(s) 363, 446
Bbv12I GWGCWC 1 cut(s) 218
BbvI GCAGC 5 cut(s) 85, 248, 634, 767, 968
BccI CCATC 1 cut(s) 35
BceAI ACGGC 1 cut(s) 491
BcgI CGANNNNNNTGC 2 cut(s) 107, 141
BcnI CCSGG 1 cut(s) 322
BcoDI GTCTC 2 cut(s) 174, 543
BfaI CTAG 4 cut(s) 233, 656, 773, 803
BglII AGATCT 1 cut(s) 243
BisI GCNGC 8 cut(s) 74, 237, 312, 555, 648, 661, 756, 957
BlsI GCNGC 8 cut(s) 75, 238, 313, 556, 649, 662, 757, 958
Bme1390I CCNGG 1 cut(s) 322
BmgBI CACGTC 1 cut(s) 871
BmgT120I GGNCC 1 cut(s) 451
BmiI GGNNCC 1 cut(s) 179
BmrFI CCNGG 1 cut(s) 322
BmsI GCATC 5 cut(s) 19, 37, 484, 767, 863
BpuEI CTTGAG 2 cut(s) 913, 980
BpuMI CCSGG 1 cut(s) 322
BsaBI GATNNNNATC 2 cut(s) 498, 813
BsaHI GRCGYC 1 cut(s) 799
BsaJI CCNNGG 1 cut(s) 321
Bsc4I CCNNNNNNNGG 3 cut(s) 310, 321, 448
Bse3DI GCAATG 1 cut(s) 306
Bse8I GATNNNNATC 2 cut(s) 498, 813
BseDI CCNNGG 1 cut(s) 321
BseGI GGATG 1 cut(s) 420
BseJI GATNNNNATC 2 cut(s) 498, 813
BseLI CCNNNNNNNGG 3 cut(s) 310, 321, 448
BseMI GCAATG 1 cut(s) 306
BseXI GCAGC 5 cut(s) 85, 248, 634, 767, 968
BsgI GTGCAG 2 cut(s) 428, 774
Bsh1236I CGCG 2 cut(s) 156, 299
BshFI GGCC 6 cut(s) 99, 222, 314, 452, 554, 660
BsiHKAI GWGCWC 1 cut(s) 218
BsiSI CCGG 2 cut(s) 219, 321
BslFI GGGAC 2 cut(s) 619, 888
BslI CCNNNNNNNGG 3 cut(s) 310, 321, 448
BsmAI GTCTC 2 cut(s) 174, 543
BsmFI GGGAC 2 cut(s) 619, 888
BsnI GGCC 6 cut(s) 99, 222, 314, 452, 554, 660
Bsp1286I GDGCHC 2 cut(s) 182, 218
Bsp1407I TGTACA 1 cut(s) 78
Bsp143I GATC 5 cut(s) 142, 243, 499, 823, 843
BspACI CCGC 4 cut(s) 297, 311, 555, 661
BspANI GGCC 6 cut(s) 99, 222, 314, 452, 554, 660
BspFNI CGCG 2 cut(s) 156, 299
BspHI TCATGA 1 cut(s) 139
BspLI GGNNCC 1 cut(s) 179
BspPI GGATC 4 cut(s) 137, 494, 831, 838
BsrDI GCAATG 1 cut(s) 306
BsrGI TGTACA 1 cut(s) 78
BssECI CCNNGG 1 cut(s) 321
BssMI GATC 5 cut(s) 142, 243, 499, 823, 843
BssNI GRCGYC 1 cut(s) 799
BssSI CACGAG 2 cut(s) 363, 446
Bst2BI CACGAG 2 cut(s) 363, 446
Bst6I CTCTTC 1 cut(s) 354
BstACI GRCGYC 1 cut(s) 799
BstAUI TGTACA 1 cut(s) 78
BstC8I GCNNGC 1 cut(s) 154
BstDEI CTNAG 1 cut(s) 790
BstEII GGTNACC 1 cut(s) 464
BstENI CCTNNNNNAGG 1 cut(s) 446
BstF5I GGATG 1 cut(s) 420
BstFNI CGCG 2 cut(s) 156, 299
BstHHI GCGC 3 cut(s) 10, 63, 301
BstKTI GATC 5 cut(s) 145, 246, 502, 826, 846
BstMAI GTCTC 2 cut(s) 174, 543
BstMBI GATC 5 cut(s) 142, 243, 499, 823, 843
BstMWI GCNNNNNNNGC 3 cut(s) 317, 503, 792
BstPI GGTNACC 1 cut(s) 464
BstSCI CCNGG 1 cut(s) 320
BstUI CGCG 2 cut(s) 156, 299
BstV1I GCAGC 5 cut(s) 85, 248, 634, 767, 968
BstX2I RGATCY 1 cut(s) 243
BstYI RGATCY 1 cut(s) 243
BsuRI GGCC 6 cut(s) 99, 222, 314, 452, 554, 660
BtrI CACGTC 1 cut(s) 871
BtsCI GGATG 1 cut(s) 420
BtsI GCAGTG 1 cut(s) 435
BtsIMutI CAGTG 1 cut(s) 435
Cac8I GCNNGC 1 cut(s) 154
CaiI CAGNNNCTG 2 cut(s) 76, 166
CciI TCATGA 1 cut(s) 139
CfoI GCGC 3 cut(s) 10, 63, 301
Cfr13I GGNCC 1 cut(s) 451
Csp6I GTAC 3 cut(s) 67, 79, 1072
CviAII CATG 5 cut(s) 14, 95, 140, 224, 950
CviQI GTAC 3 cut(s) 67, 79, 1072
DdeI CTNAG 1 cut(s) 790
DpnI GATC 5 cut(s) 144, 245, 501, 825, 845
DpnII GATC 5 cut(s) 142, 243, 499, 823, 843
DrdI GACNNNNNNGTC 1 cut(s) 980
DseDI GACNNNNNNGTC 1 cut(s) 980
EaeI YGGCCR 4 cut(s) 97, 220, 312, 552
Eam1104I CTCTTC 1 cut(s) 354
EarI CTCTTC 1 cut(s) 354
Ecl136II GAGCTC 1 cut(s) 216
Eco24I GRGCYC 2 cut(s) 182, 218
Eco53kI GAGCTC 1 cut(s) 216
Eco91I GGTNACC 1 cut(s) 464
EcoICRI GAGCTC 1 cut(s) 216
EcoNI CCTNNNNNAGG 1 cut(s) 446
EcoO109I RGGNCCY 1 cut(s) 451
EcoO65I GGTNACC 1 cut(s) 464
EcoRI GAATTC 1 cut(s) 715
EcoT22I ATGCAT 1 cut(s) 856
EcoT38I GRGCYC 2 cut(s) 182, 218
FaeI CATG 5 cut(s) 17, 98, 143, 227, 953
FaqI GGGAC 2 cut(s) 619, 888
FatI CATG 5 cut(s) 13, 94, 139, 223, 949
FblI GTMKAC 1 cut(s) 873
Fnu4HI GCNGC 8 cut(s) 74, 237, 312, 555, 648, 661, 756, 957
FokI GGATG 1 cut(s) 427
FriOI GRGCYC 2 cut(s) 182, 218
Fsp4HI GCNGC 8 cut(s) 74, 237, 312, 555, 648, 661, 756, 957
FspBI CTAG 4 cut(s) 233, 656, 773, 803
GlaI GCGC 3 cut(s) 9, 62, 300
GluI GCNGC 8 cut(s) 74, 237, 312, 555, 648, 661, 756, 957
HaeIII GGCC 6 cut(s) 99, 222, 314, 452, 554, 660
HapII CCGG 2 cut(s) 219, 321
HhaI GCGC 3 cut(s) 10, 63, 301
Hin1I GRCGYC 1 cut(s) 799
Hin1II CATG 5 cut(s) 17, 98, 143, 227, 953
Hin6I GCGC 3 cut(s) 8, 61, 299
HinP1I GCGC 3 cut(s) 8, 61, 299
HincII GTYRAC 1 cut(s) 874
HindII GTYRAC 1 cut(s) 874
HinfI GANTC 4 cut(s) 457, 739, 809, 908
HpaII CCGG 2 cut(s) 219, 321
HphI GGTGA 4 cut(s) 56, 302, 404, 458
Hpy166II GTNNAC 2 cut(s) 202, 874
Hpy188I TCNGA 1 cut(s) 843
Hpy188III TCNNGA 6 cut(s) 140, 171, 773, 818, 905, 997
Hpy8I GTNNAC 2 cut(s) 202, 874
Hpy99I CGWCG 2 cut(s) 177, 875
HpyAV CCTTC 3 cut(s) 281, 770, 994
HpyCH4IV ACGT 4 cut(s) 378, 404, 799, 870
HpyCH4V TGCA 7 cut(s) 128, 445, 650, 755, 854, 956, 1057
HpyF10VI GCNNNNNNNGC 3 cut(s) 317, 503, 792
HpyF3I CTNAG 1 cut(s) 790
HpySE526I ACGT 4 cut(s) 378, 404, 799, 870
Hsp92I GRCGYC 1 cut(s) 799
Hsp92II CATG 5 cut(s) 17, 98, 143, 227, 953
HspAI GCGC 3 cut(s) 8, 61, 299
Kzo9I GATC 5 cut(s) 142, 243, 499, 823, 843
LmnI GCTCC 3 cut(s) 177, 221, 306
LpnPI CCDG 9 cut(s) 8, 83, 197, 232, 334, 455, 467, 516, 677
Lsp1109I GCAGC 5 cut(s) 85, 248, 634, 767, 968
LweI GCATC 5 cut(s) 19, 37, 484, 767, 863
MaeI CTAG 4 cut(s) 233, 656, 773, 803
MaeII ACGT 4 cut(s) 378, 404, 799, 870
MaeIII GTNAC 4 cut(s) 290, 464, 866, 932
MalI GATC 5 cut(s) 144, 245, 501, 825, 845
MboI GATC 5 cut(s) 142, 243, 499, 823, 843
MboII GAAGA 3 cut(s) 44, 341, 622
MfeI CAATTG 1 cut(s) 762
MflI RGATCY 1 cut(s) 243
MhlI GDGCHC 2 cut(s) 182, 218
MlsI TGGCCA 1 cut(s) 99
MluCI AATT 5 cut(s) 621, 651, 715, 762, 917
MluNI TGGCCA 1 cut(s) 99
MlyI GAGTC 2 cut(s) 733, 902
MnlI CCTC 9 cut(s) 359, 405, 421, 442, 455, 729, 814, 915, 1034
Mox20I TGGCCA 1 cut(s) 99
Mph1103I ATGCAT 1 cut(s) 856
MroXI GAANNNNTTC 1 cut(s) 780
MscI TGGCCA 1 cut(s) 99
MseI TTAA 2 cut(s) 114, 882
MslI CAYNNNNRTG 1 cut(s) 209
Msp20I TGGCCA 1 cut(s) 99
MspA1I CMGCKG 2 cut(s) 76, 557
MspI CCGG 2 cut(s) 219, 321
MspR9I CCNGG 1 cut(s) 322
MunI CAATTG 1 cut(s) 762
MvnI CGCG 2 cut(s) 156, 299
MwoI GCNNNNNNNGC 3 cut(s) 317, 503, 792
NciI CCSGG 1 cut(s) 322
NdeII GATC 5 cut(s) 142, 243, 499, 823, 843
NlaIII CATG 5 cut(s) 17, 98, 143, 227, 953
NlaIV GGNNCC 1 cut(s) 179
NmuCI GTSAC 4 cut(s) 290, 464, 866, 932
NsiI ATGCAT 1 cut(s) 856
PagI TCATGA 1 cut(s) 139
PdmI GAANNNNTTC 1 cut(s) 780
PfeI GAWTC 2 cut(s) 457, 809
PkrI GCNGC 8 cut(s) 75, 238, 313, 556, 649, 662, 757, 958
PleI GAGTC 2 cut(s) 733, 902
PpsI GAGTC 2 cut(s) 733, 902
Psp124BI GAGCTC 1 cut(s) 218
Psp1406I AACGTT 1 cut(s) 378
PspEI GGTNACC 1 cut(s) 464
PspN4I GGNNCC 1 cut(s) 179
PspPI GGNCC 1 cut(s) 451
PstNI CAGNNNCTG 2 cut(s) 76, 166
PsuI RGATCY 1 cut(s) 243
PvuII CAGCTG 1 cut(s) 76
RsaI GTAC 3 cut(s) 68, 80, 1073
RsaNI GTAC 3 cut(s) 67, 79, 1072
RseI CAYNNNNRTG 1 cut(s) 209
SacI GAGCTC 1 cut(s) 218
SalI GTCGAC 1 cut(s) 872
SaqAI TTAA 2 cut(s) 114, 882
SatI GCNGC 8 cut(s) 74, 237, 312, 555, 648, 661, 756, 957
Sau3AI GATC 5 cut(s) 142, 243, 499, 823, 843
Sau96I GGNCC 1 cut(s) 451
SchI GAGTC 2 cut(s) 733, 902
ScrFI CCNGG 1 cut(s) 322
SduI GDGCHC 2 cut(s) 182, 218
SfaNI GCATC 5 cut(s) 19, 37, 484, 767, 863
SmiMI CAYNNNNRTG 1 cut(s) 209
SmlI CTYRAG 2 cut(s) 928, 995
SmoI CTYRAG 2 cut(s) 928, 995
Sse9I AATT 5 cut(s) 621, 651, 715, 762, 917
SsiI CCGC 4 cut(s) 297, 311, 555, 661
SspI AATATT 2 cut(s) 709, 989
SspMI CTAG 4 cut(s) 233, 656, 773, 803
SstI GAGCTC 1 cut(s) 218
StyD4I CCNGG 1 cut(s) 320
TaiI ACGT 4 cut(s) 381, 407, 802, 873
TaqI TCGA 4 cut(s) 172, 460, 873, 895
TasI AATT 5 cut(s) 621, 651, 715, 762, 917
TatI WGTACW 1 cut(s) 78
TauI GCSGC 3 cut(s) 314, 557, 663
TfiI GAWTC 2 cut(s) 457, 809
Tru1I TTAA 2 cut(s) 114, 882
Tru9I TTAA 2 cut(s) 114, 882
TscAI CASTG 1 cut(s) 442
TseFI GTSAC 4 cut(s) 290, 464, 866, 932
TseI GCWGC 5 cut(s) 73, 236, 647, 755, 956
Tsp45I GTSAC 4 cut(s) 290, 464, 866, 932
TspDTI ATGAA 3 cut(s) 83, 128, 431
TspGWI ACGGA 2 cut(s) 190, 344
TspRI CASTG 1 cut(s) 442
XagI CCTNNNNNAGG 1 cut(s) 446
XapI RAATTY 2 cut(s) 621, 715
XbaI TCTAGA 1 cut(s) 772
XmiI GTMKAC 1 cut(s) 873
XmnI GAANNNNTTC 1 cut(s) 780
XspI CTAG 4 cut(s) 233, 656, 773, 803
ZraI GACGTC 1 cut(s) 800
Zsp2I ATGCAT 1 cut(s) 856
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.