Rh3AG105900

ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3A
OG0000494
Physical Location & Seq
Forward (+)
8946931 .. 8954716
7786 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3AG105900.1

Sequence Viewer

Length: 1770 bp
ATGATCTACCAAAAAATCTTGGGCTTTTACGAATGGCTTCTCCATATGTATACAACCTACTCTTATTCCGGCTTCAGCATTCCCTCTGAAGTAGAATTACTGTTACAAATAAATGGAGACAAAGTAAGCCCTGGCCGGAATACAGTGCTTCACCTTGCGGCAAGTGTAGGCAATACCCATCTCGTCACACAGATACTGGATCGTTTTCCGAGCCTTGTCACAGAAAACAACTGTCGTGGAGATTCTCCGCTTCATGTTGCAGCACACGGTGGGCATCTATCTACGGTGCGTTGTTTGGTTGAAAAGTTGAAGACACTGATTGGTGAAAAGAATGCGGAAGGAAACACAGCGTTACACATTGCCTTAGAAAATCACCACAAAAAAGTGGCCAAGTTTTTAGTCGAACAAGATGGATTGATCTCGCATTCCCAAAATAACAGCAAAAAGACACCGTTGTGCATGGCTGCGGAAGCTGGAAATCTTGACCTTGTTCAAGTTATGGTGGTCATGACACCAGCTGCTGTTTGGAAAGAGTCCAGTGGCTGCTCAATTTTGCGTGCTGCTATCGTGGGAAGGAATAATGACATCTTGAAGACATTATTATTCAAAATTGATCCTACTCTCATCCATGTGTCAAAAGACGAAGAGGAACAGGGGATGCCTCCTCTTGCACTTGCAGCATATATAGGTAACTTTGATGCCGTACGCTGCTTGTTAGACAAATGCAGTAACGATGCATACAGGCAGGACCCAAATGGATTCTTTCCGATATATATAGCGTCCCGAAACGGCAACATCAAGATAGTTCAAGAATTCCTCAATCATTGCCCAGACTTGAAGGAGTTACATGACAAGCAAGGCCGGAACATTCTTCATGTGGCAGCTGCGTATGGACGAGCTAAGCTGGTTGAATATATGCTTGGAACGACCAAGCTTGAAATGCTTCTCAACGAAAGAGATAATTTCGGAAACACCCCTCTACACGTAGCTGTTCAGAACTGGCATCCTAGGATTGTCAAAATTCTGACCCGGGATAAGAGAGTTCACCAAAAGATTCTCAACAATAAGGGCATGACAGCATTTGATATTGCAGAGAAGTCCGAGGTTCATAAAGACATGCTGTTTCGATGGAAACTAACTTTTATGGCCTTGAGATTAGCTAATGCTCCCCGATCTGAGATACAAAGAGTTGCAAAAGAAAGTGGAGCAAATGATTATGGTGAGAAGACCAAGAATAATCCTGATTATCTACTATTCTCAAGAGAAAATATGAATACTCTCCTTATAGTGTCGACACTGGTGGCTGCTATAACTTTTGCTGCTGGCTTCACTGTGCCGGGAGGATATAAGAACTCTGGAACTGACGAAGGCATGGCAACCTTGCGTAATACAGCTCTATTCCAAATATTCTTGATATGCAACACCATTTCAATGTACAGCTCTATTACAGTTGCGATTGCGCTTATCTGGGCACAGGCAGGTGATCTTAAAATGATTTGTGTTGCTGTGAGGACTATACTACCCATGTTAGGCCTAGCTCTTATAATGATGTCCGTGGCATTCCTAGCTGGTGTTGATCTCGTAGCGAATAACCTTACTTGCGGCTACGTTGTCGTGGCCCTGGGCTCGTTTTTCATCGTCCAAGTAGTTGTGTTCATTCTTCCGCTCACAATCCCACTTTCCTCCAAGAATTGCATTACACACTTCATTTTACGTGGTAACCTTCGTTTGCTGATGATGGTAACTAGATATGAGGTTGAGAGTGGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001101 GO:0002376 GO:0002831 GO:0002833 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0005886 GO:0005887 GO:0006464 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0008152 GO:0008219 GO:0009266 GO:0009314 GO:0009409 GO:0009416 GO:0009605 GO:0009607 GO:0009615 GO:0009617 GO:0009628 GO:0009719 GO:0009725 GO:0009751 GO:0009814 GO:0009816 GO:0009966 GO:0009987 GO:0010033 GO:0010646 GO:0012505 GO:0014070 GO:0016020 GO:0016021 GO:0016567 GO:0019538 GO:0023051 GO:0030176 GO:0031224 GO:0031226 GO:0031227 GO:0031347 GO:0031349 GO:0031984 GO:0032101 GO:0032103 GO:0032446 GO:0032870 GO:0035690 GO:0036211 GO:0042175 GO:0042221 GO:0042493 GO:0042742 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043900 GO:0043902 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044459 GO:0044464 GO:0045087 GO:0046677 GO:0048518 GO:0048583 GO:0048584 GO:0050789 GO:0050794 GO:0050826 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0065007 GO:0070647 GO:0070887 GO:0071229 GO:0071236 GO:0071310 GO:0071407 GO:0071446 GO:0071495 GO:0071704 GO:0071944 GO:0080134 GO:0098542 GO:0098827 GO:1900150 GO:1900424 GO:1900426 GO:1901564 GO:1901700 GO:1901701 GO:1902288 GO:1902290 GO:2000031 GO:2001023 GO:2001038
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank Ank_2 Ank_4 PGG

Protein Analysis

589

Amino Acids

65.31

Weight (kDa)

8.7

Isoelectric Point (pI)

30.09

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 31 - 100 1.8e-07 Ankyrin repeats (3 copies)
Ank_2 PF12796 50 - 136 1.5e-15 Ankyrin repeats (3 copies)
Ank_4 PF13637 84 - 134 4.4e-09 Ankyrin repeats (many copies)
Ank_2 PF12796 187 - 273 1.3e-08 Ankyrin repeats (3 copies)
Ank_2 PF12796 223 - 307 1.5e-13 Ankyrin repeats (3 copies)
Ank_4 PF13637 291 - 342 4.3e-06 Ankyrin repeats (many copies)
Ank_5 PF13857 314 - 364 3.9e-06 Ankyrin repeats (many copies)
PGG PF13962 422 - 525 1.8e-26 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000494)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G03670 AT4G03440 AT4G03440 AT4G03440 AT4G03450 AT4G03450 AT4G03460 AT4G03460 AT4G03470 AT4G03480 AT4G03480 AT4G03490 AT4G03490 AT4G03490 AT4G03490 AT4G03490 AT4G03500 AT4G03500 AT4G03500 AT4G03505 AT4G05040 AT4G05040 AT4G05040 AT4G05040 AT4G05040 AT4G05040 AT4G05040 AT4G14390 AT4G14390 AT4G14390 AT4G14390 AT4G14400 AT4G14400 AT4G14400
fragaria_vesca FvH4_3g05910 FvH4_3g23320
malus_domestica MD03G1094000.v1.1 MD03G1094200.v1.1 MD03G1094600.v1.1 MD12G1218700.v1.1
prunus_persica Prupe.3G135100_v2.0.a1 Prupe.3G135200_v2.0.a1 Prupe.3G135700_v2.0.a1 Prupe.3G135700_v2.0.a1 Prupe.3G142400_v2.0.a1 Prupe.3G153800_v2.0.a1 Prupe.3G153800_v2.0.a1 Prupe.3G153800_v2.0.a1 Prupe.3G153800_v2.0.a1 Prupe.3G154000_v2.0.a1 Prupe.3G154200_v2.0.a1 Prupe.3G154200_v2.0.a1 Prupe.3G154600_v2.0.a1 Prupe.3G154700_v2.0.a1 Prupe.3G155200_v2.0.a1 Prupe.3G155300_v2.0.a1 Prupe.8G110300_v2.0.a1
pyrus_communis pycom03g07280 pycom03g07580 pycom03g07660 pycom03g07700 pycom03g07710
rosa_chinensis RchiOBHm_Chr3g0461161 RchiOBHm_Chr5g0041111
rosa_laevigata RLG00000023472 RLG00000023475 RLG00000034025
rosa_multiflora Rmu_co8126040.1_g000001 Rmu_co8268563.1_g000001 Rmu_sc0000964.1_g000014 Rmu_sc0028923.1_g000001 Rmu_sc0042194.1_g000001
rosa_roxburghii Rroxscaffold_1G00039610 Rroxscaffold_6G00401360
rosa_rugosa Rorug03G0048600 Rorug03G0048700 Rorug05G0190000
rosa_samantha Rh3AG105900 Rh3BG110200 Rh3BG268400 Rh3CG111800 Rh3DG111900 Rh5AG275800 Rh5BG280500 Rh5CG312600 Rh5DG288800
rosa_wichuraiana Rw3G009080 Rw5G025920

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1544
AarI CACCTGC 1 cut(s) 1469
Acc36I ACCTGC 1 cut(s) 1469
AccBSI CCGCTC 1 cut(s) 1666
AccI GTMKAC 2 cut(s) 50, 1292
AciI CCGC 6 cut(s) 158, 248, 335, 467, 1602, 1664
AclWI GGATC 2 cut(s) 207, 608
AcoI YGGCCR 2 cut(s) 133, 387
AcsI RAATTY 2 cut(s) 812, 1020
AcuI CTGAAG 2 cut(s) 58, 108
AdeI CACNNNGTG 1 cut(s) 269
AfaI GTAC 2 cut(s) 705, 1436
AfiI CCNNNNNNNGG 1 cut(s) 1529
AflIII ACRYGT 1 cut(s) 982
AjnI CCWGG 2 cut(s) 130, 1620
AjuI GAANNNNNNNTTGG 2 cut(s) 903, 935
AleI CACNNNNGTG 1 cut(s) 454
Alw26I GTCTC 1 cut(s) 111
AlwI GGATC 2 cut(s) 207, 608
AlwNI CAGNNNCTG 3 cut(s) 196, 521, 543
Ama87I CYCGRG 1 cut(s) 1029
AoxI GGCC 6 cut(s) 133, 387, 859, 1146, 1531, 1617
ApoI RAATTY 2 cut(s) 812, 1020
Asp700I GAANNNNTTC 2 cut(s) 36, 942
AspA2I CCTAGG 1 cut(s) 1007
AspLEI GCGC 1 cut(s) 1462
AspS9I GGNCC 2 cut(s) 748, 1618
AsuC2I CCSGG 3 cut(s) 1030, 1031, 1338
AsuHPI GGTGA 6 cut(s) 143, 335, 365, 1037, 1232, 1493
AvaI CYCGRG 1 cut(s) 1029
AvaII GGWCC 1 cut(s) 748
AvrII CCTAGG 1 cut(s) 1007
BaeGI GKGCMC 1 cut(s) 1474
BalI TGGCCA 1 cut(s) 389
BanII GRGCYC 1 cut(s) 1628
BarI GAAGNNNNNNTAC 2 cut(s) 81, 113
BbsI GAAGAC 3 cut(s) 317, 599, 1232
BccI CCATC 4 cut(s) 186, 404, 1122, 1732
BceAI ACGGC 2 cut(s) 686, 805
BciT130I CCWGG 2 cut(s) 132, 1622
BcnI CCSGG 3 cut(s) 1030, 1031, 1338
BcoDI GTCTC 1 cut(s) 111
BfaI CTAG 4 cut(s) 1008, 1535, 1565, 1746
BfuAI ACCTGC 1 cut(s) 1469
BlnI CCTAGG 1 cut(s) 1007
BlpI GCTNAGC 1 cut(s) 900
Bme1390I CCNGG 5 cut(s) 132, 1030, 1031, 1338, 1622
Bme18I GGWCC 1 cut(s) 748
BmeT110I CYCGRG 1 cut(s) 1029
BmgT120I GGNCC 2 cut(s) 748, 1618
BmiI GGNNCC 1 cut(s) 750
BmrFI CCNGG 5 cut(s) 132, 1030, 1031, 1338, 1622
BmsI GCATC 5 cut(s) 283, 648, 688, 724, 1012
BpiI GAAGAC 3 cut(s) 317, 599, 1232
Bpu1102I GCTNAGC 1 cut(s) 900
BpuEI CTTGAG 2 cut(s) 1171, 1243
BpuMI CCSGG 3 cut(s) 1030, 1031, 1338
BsaAI YACGTR 2 cut(s) 985, 1715
BsaJI CCNNGG 7 cut(s) 130, 1007, 1029, 1101, 1554, 1620, 1621
BsaXI ACNNNNNCTCC 2 cut(s) 108, 138
Bsc4I CCNNNNNNNGG 1 cut(s) 1529
Bse1I ACTGG 4 cut(s) 201, 537, 1004, 1302
Bse3DI GCAATG 2 cut(s) 357, 823
BseBI CCWGG 2 cut(s) 132, 1622
BseDI CCNNGG 7 cut(s) 130, 1007, 1029, 1101, 1554, 1620, 1621
BseGI GGATG 3 cut(s) 624, 663, 1003
BseLI CCNNNNNNNGG 1 cut(s) 1529
BseMI GCAATG 2 cut(s) 357, 823
BseMII CTCAG 1 cut(s) 1167
BseNI ACTGG 4 cut(s) 201, 537, 1004, 1302
BseRI GAGGAG 1 cut(s) 654
BseSI GKGCMC 1 cut(s) 1474
BshFI GGCC 6 cut(s) 135, 389, 861, 1148, 1533, 1619
BsiHKCI CYCGRG 1 cut(s) 1029
BsiSI CCGG 5 cut(s) 69, 136, 862, 1030, 1337
BsiWI CGTACG 1 cut(s) 703
BslFI GGGAC 1 cut(s) 766
BslI CCNNNNNNNGG 1 cut(s) 1529
BsmAI GTCTC 1 cut(s) 111
BsmFI GGGAC 1 cut(s) 766
BsmI GAATGC 4 cut(s) 78, 337, 424, 1559
BsnI GGCC 6 cut(s) 135, 389, 861, 1148, 1533, 1619
BsoBI CYCGRG 1 cut(s) 1029
Bsp1286I GDGCHC 2 cut(s) 1474, 1628
Bsp1407I TGTACA 1 cut(s) 1434
Bsp143I GATC 7 cut(s) 3, 199, 417, 613, 1172, 1483, 1576
Bsp1720I GCTNAGC 1 cut(s) 900
BspACI CCGC 6 cut(s) 158, 248, 335, 467, 1602, 1664
BspANI GGCC 6 cut(s) 135, 389, 861, 1148, 1533, 1619
BspCNI CTCAG 1 cut(s) 1168
BspHI TCATGA 1 cut(s) 507
BspLI GGNNCC 1 cut(s) 750
BspMI ACCTGC 1 cut(s) 1469
BspPI GGATC 2 cut(s) 207, 608
BsrBI CCGCTC 1 cut(s) 1666
BsrDI GCAATG 2 cut(s) 357, 823
BsrGI TGTACA 1 cut(s) 1434
BsrI ACTGG 4 cut(s) 201, 537, 1004, 1302
BssECI CCNNGG 7 cut(s) 130, 1007, 1029, 1101, 1554, 1620, 1621
BssMI GATC 7 cut(s) 3, 199, 417, 613, 1172, 1483, 1576
BssNAI GTATAC 1 cut(s) 51
BssT1I CCWWGG 1 cut(s) 1007
Bst1107I GTATAC 1 cut(s) 51
Bst2UI CCWGG 2 cut(s) 132, 1622
Bst4CI ACNGT 8 cut(s) 102, 145, 233, 269, 286, 453, 1333, 1450
Bst6I CTCTTC 1 cut(s) 639
BstAUI TGTACA 1 cut(s) 1434
BstBAI YACGTR 2 cut(s) 985, 1715
BstC8I GCNNGC 2 cut(s) 558, 1324
BstDEI CTNAG 3 cut(s) 364, 900, 1176
BstDSI CCRYGG 1 cut(s) 1554
BstEII GGTNACC 1 cut(s) 1718
BstF5I GGATG 3 cut(s) 624, 663, 1003
BstHHI GCGC 1 cut(s) 1462
BstKTI GATC 7 cut(s) 6, 202, 420, 616, 1175, 1486, 1579
BstMAI GTCTC 1 cut(s) 111
BstMBI GATC 7 cut(s) 3, 199, 417, 613, 1172, 1483, 1576
BstMWI GCNNNNNNNGC 4 cut(s) 470, 677, 940, 1565
BstNI CCWGG 2 cut(s) 132, 1622
BstNSI RCATGY 1 cut(s) 1120
BstPI GGTNACC 1 cut(s) 1718
BstSCI CCNGG 5 cut(s) 130, 1028, 1029, 1336, 1620
BstSLI GKGCMC 1 cut(s) 1474
BstV2I GAAGAC 3 cut(s) 317, 599, 1232
BstZ17I GTATAC 1 cut(s) 51
BsuRI GGCC 6 cut(s) 135, 389, 861, 1148, 1533, 1619
BtgI CCRYGG 1 cut(s) 1554
BtsCI GGATG 3 cut(s) 624, 663, 1003
BtsIMutI CAGTG 5 cut(s) 150, 314, 544, 1295, 1329
BveI ACCTGC 1 cut(s) 1469
Cac8I GCNNGC 2 cut(s) 558, 1324
CaiI CAGNNNCTG 3 cut(s) 196, 521, 543
CciI TCATGA 1 cut(s) 507
CfoI GCGC 1 cut(s) 1462
Cfr13I GGNCC 2 cut(s) 748, 1618
Cfr9I CCCGGG 1 cut(s) 1029
CseI GACGC 1 cut(s) 768
Csp6I GTAC 2 cut(s) 704, 1435
CspCI CAANNNNNGTGG 2 cut(s) 217, 252
CviQI GTAC 2 cut(s) 704, 1435
DdeI CTNAG 3 cut(s) 364, 900, 1176
DpnI GATC 7 cut(s) 5, 201, 419, 615, 1174, 1485, 1578
DpnII GATC 7 cut(s) 3, 199, 417, 613, 1172, 1483, 1576
DraIII CACNNNGTG 1 cut(s) 269
EaeI YGGCCR 2 cut(s) 133, 387
Eam1104I CTCTTC 1 cut(s) 639
EarI CTCTTC 1 cut(s) 639
Eco130I CCWWGG 1 cut(s) 1007
Eco147I AGGCCT 1 cut(s) 1533
Eco24I GRGCYC 1 cut(s) 1628
Eco47I GGWCC 1 cut(s) 748
Eco57I CTGAAG 2 cut(s) 58, 108
Eco88I CYCGRG 1 cut(s) 1029
Eco91I GGTNACC 1 cut(s) 1718
EcoO109I RGGNCCY 1 cut(s) 748
EcoO65I GGTNACC 1 cut(s) 1718
EcoRI GAATTC 1 cut(s) 812
EcoRII CCWGG 2 cut(s) 130, 1620
EcoT14I CCWWGG 1 cut(s) 1007
EcoT22I ATGCAT 1 cut(s) 739
EcoT38I GRGCYC 1 cut(s) 1628
ErhI CCWWGG 1 cut(s) 1007
FaqI GGGAC 1 cut(s) 766
FauNDI CATATG 1 cut(s) 45
FblI GTMKAC 2 cut(s) 50, 1292
FokI GGATG 3 cut(s) 611, 670, 990
FriOI GRGCYC 1 cut(s) 1628
FspBI CTAG 4 cut(s) 1008, 1535, 1565, 1746
GlaI GCGC 1 cut(s) 1461
HaeIII GGCC 6 cut(s) 135, 389, 861, 1148, 1533, 1619
HapII CCGG 5 cut(s) 69, 136, 862, 1030, 1337
HgaI GACGC 1 cut(s) 768
HhaI GCGC 1 cut(s) 1462
Hin6I GCGC 1 cut(s) 1460
HinP1I GCGC 1 cut(s) 1460
HincII GTYRAC 1 cut(s) 1293
HindII GTYRAC 1 cut(s) 1293
HindIII AAGCTT 1 cut(s) 932
HinfI GANTC 4 cut(s) 242, 533, 759, 1054
HpaII CCGG 5 cut(s) 69, 136, 862, 1030, 1337
HphI GGTGA 6 cut(s) 143, 335, 365, 1037, 1232, 1493
Hpy166II GTNNAC 3 cut(s) 51, 1045, 1293
Hpy188I TCNGA 8 cut(s) 88, 210, 768, 968, 996, 1026, 1102, 1177
Hpy8I GTNNAC 3 cut(s) 51, 1045, 1293
HpyAV CCTTC 5 cut(s) 332, 567, 832, 1361, 1733
HpyCH4III ACNGT 8 cut(s) 102, 145, 233, 269, 286, 453, 1333, 1450
HpyCH4IV ACGT 3 cut(s) 984, 1608, 1714
HpyF10VI GCNNNNNNNGC 4 cut(s) 470, 677, 940, 1565
HpyF3I CTNAG 3 cut(s) 364, 900, 1176
HpySE526I ACGT 3 cut(s) 984, 1608, 1714
HspAI GCGC 1 cut(s) 1460
Kzo9I GATC 7 cut(s) 3, 199, 417, 613, 1172, 1483, 1576
LmnI GCTCC 2 cut(s) 1171, 1205
LweI GCATC 5 cut(s) 283, 648, 688, 724, 1012
MaeI CTAG 4 cut(s) 1008, 1535, 1565, 1746
MaeII ACGT 3 cut(s) 984, 1608, 1714
MaeIII GTNAC 9 cut(s) 102, 184, 217, 351, 689, 728, 843, 1718, 1741
MalI GATC 7 cut(s) 5, 201, 419, 615, 1174, 1485, 1578
MbiI CCGCTC 1 cut(s) 1666
MboI GATC 7 cut(s) 3, 199, 417, 613, 1172, 1483, 1576
MboII GAAGA 6 cut(s) 322, 604, 656, 863, 1237, 1652
MhlI GDGCHC 2 cut(s) 1474, 1628
MlsI TGGCCA 1 cut(s) 389
MluCI AATT 7 cut(s) 95, 549, 609, 812, 961, 1020, 1690
MluNI TGGCCA 1 cut(s) 389
MlyI GAGTC 1 cut(s) 542
Mox20I TGGCCA 1 cut(s) 389
Mph1103I ATGCAT 1 cut(s) 739
MroXI GAANNNNTTC 2 cut(s) 36, 942
MscI TGGCCA 1 cut(s) 389
MseI TTAA 1 cut(s) 1488
MslI CAYNNNNRTG 3 cut(s) 454, 629, 1430
Msp20I TGGCCA 1 cut(s) 389
MspA1I CMGCKG 2 cut(s) 518, 884
MspI CCGG 5 cut(s) 69, 136, 862, 1030, 1337
MspR9I CCNGG 5 cut(s) 132, 1030, 1031, 1338, 1622
Mva1269I GAATGC 4 cut(s) 78, 337, 424, 1559
MvaI CCWGG 2 cut(s) 132, 1622
MwoI GCNNNNNNNGC 4 cut(s) 470, 677, 940, 1565
NciI CCSGG 3 cut(s) 1030, 1031, 1338
NdeI CATATG 1 cut(s) 45
NdeII GATC 7 cut(s) 3, 199, 417, 613, 1172, 1483, 1576
NlaIV GGNNCC 1 cut(s) 750
NmuCI GTSAC 2 cut(s) 184, 217
NsiI ATGCAT 1 cut(s) 739
NspI RCATGY 1 cut(s) 1120
OliI CACNNNNGTG 1 cut(s) 454
PagI TCATGA 1 cut(s) 507
PaqCI CACCTGC 1 cut(s) 1469
PasI CCCWGGG 1 cut(s) 1621
PceI AGGCCT 1 cut(s) 1533
PctI GAATGC 4 cut(s) 78, 337, 424, 1559
PdmI GAANNNNTTC 2 cut(s) 36, 942
PfeI GAWTC 3 cut(s) 242, 759, 1054
Pfl23II CGTACG 1 cut(s) 703
PleI GAGTC 1 cut(s) 541
PpsI GAGTC 1 cut(s) 541
Ppu21I YACGTR 2 cut(s) 985, 1715
PpuMI RGGWCCY 1 cut(s) 748
PsiI TTATAA 1 cut(s) 1544
Psp5II RGGWCCY 1 cut(s) 748
Psp6I CCWGG 2 cut(s) 130, 1620
PspEI GGTNACC 1 cut(s) 1718
PspGI CCWGG 2 cut(s) 130, 1620
PspLI CGTACG 1 cut(s) 703
PspN4I GGNNCC 1 cut(s) 750
PspPI GGNCC 2 cut(s) 748, 1618
PspPPI RGGWCCY 1 cut(s) 748
PstNI CAGNNNCTG 3 cut(s) 196, 521, 543
PvuII CAGCTG 2 cut(s) 518, 884
RsaI GTAC 2 cut(s) 705, 1436
RsaNI GTAC 2 cut(s) 704, 1435
RseI CAYNNNNRTG 3 cut(s) 454, 629, 1430
SalI GTCGAC 1 cut(s) 1291
SaqAI TTAA 1 cut(s) 1488
Sau3AI GATC 7 cut(s) 3, 199, 417, 613, 1172, 1483, 1576
Sau96I GGNCC 2 cut(s) 748, 1618
SchI GAGTC 1 cut(s) 542
ScrFI CCNGG 5 cut(s) 132, 1030, 1031, 1338, 1622
SduI GDGCHC 2 cut(s) 1474, 1628
SfaNI GCATC 5 cut(s) 283, 648, 688, 724, 1012
SinI GGWCC 1 cut(s) 748
SmaI CCCGGG 1 cut(s) 1031
SmiMI CAYNNNNRTG 3 cut(s) 454, 629, 1430
SmlI CTYRAG 2 cut(s) 1150, 1258
SmoI CTYRAG 2 cut(s) 1150, 1258
Sse9I AATT 7 cut(s) 95, 549, 609, 812, 961, 1020, 1690
SseBI AGGCCT 1 cut(s) 1533
SsiI CCGC 6 cut(s) 158, 248, 335, 467, 1602, 1664
SspI AATATT 1 cut(s) 1407
SspMI CTAG 4 cut(s) 1008, 1535, 1565, 1746
StuI AGGCCT 1 cut(s) 1533
StyD4I CCNGG 5 cut(s) 130, 1028, 1029, 1336, 1620
StyI CCWWGG 1 cut(s) 1007
TaaI ACNGT 8 cut(s) 102, 145, 233, 269, 286, 453, 1333, 1450
TaiI ACGT 3 cut(s) 987, 1611, 1717
TaqI TCGA 3 cut(s) 402, 1126, 1292
TasI AATT 7 cut(s) 95, 549, 609, 812, 961, 1020, 1690
TatI WGTACW 1 cut(s) 1434
TauI GCSGC 2 cut(s) 161, 1605
TfiI GAWTC 3 cut(s) 242, 759, 1054
Tru1I TTAA 1 cut(s) 1488
Tru9I TTAA 1 cut(s) 1488
TscAI CASTG 5 cut(s) 150, 321, 544, 1302, 1336
TseFI GTSAC 2 cut(s) 184, 217
Tsp45I GTSAC 2 cut(s) 184, 217
TspDTI ATGAA 7 cut(s) 242, 863, 1097, 1286, 1624, 1645, 1696
TspGWI ACGGA 1 cut(s) 1543
TspMI CCCGGG 1 cut(s) 1029
TspRI CASTG 5 cut(s) 150, 321, 544, 1302, 1336
VpaK11BI GGWCC 1 cut(s) 748
XapI RAATTY 2 cut(s) 812, 1020
XceI RCATGY 1 cut(s) 1120
XcmI CCANNNNNNNNNTGG 1 cut(s) 522
XmaI CCCGGG 1 cut(s) 1029
XmaJI CCTAGG 1 cut(s) 1007
XmiI GTMKAC 2 cut(s) 50, 1292
XmnI GAANNNNTTC 2 cut(s) 36, 942
XspI CTAG 4 cut(s) 1008, 1535, 1565, 1746
Zsp2I ATGCAT 1 cut(s) 739
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.