AT4G03470

ankyrin repeat family protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
OG0000494
Physical Location & Seq
Reverse (-)
1542018 .. 1544457
2440 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G03470.1

Sequence Viewer

Length: 2052 bp
ATGGATGTTTCTGAAGCACGTCTAAGTAGAATTGAGTCACAGAGTTCAATTGATTCGTCTCATGACCAAAGGAGACAAGGATATTTCTCCATGAACAAGATAAACAACGGTCTTCGCTCACTCAGTTCACGAGGTTTCCTTCGAAACAGAGGAAAAGCCATACCGCTGCCAATGAAAGATACCGAGAAGACTGTGCCGGAGTTCTTAGTTAATCTCAAATTTTCCGATCTTTTCGATCTCCCTGGTGAATATGTGCTGATGAATGCGGAGATGCTTAGCACACTTGGGAACGAAGAATGGCTGGAGAAATTGAGAAGCCATGGAACACCACTAACATGTCTCAAGAACGATCGAGGAGATTCTGTTCTTCATCTTGCTGCTACATGGAGTCATCTAGAACTAGTTAAGAACATTGTCTCTGAATGTTCTTGCCTTCTAATGGAGTCAAACTCTAAGGACCAGCTTCCACTTCATGTGGCAGCTCGAATGGGTCACTTAGCTGTTGTTGAGGATCTTGTTGCGTCGGTTACATTTTTCTCAGCTAGACTGGCTGAAGAAGATAGGGAGATACTGAATCCATATCTTCTGAAGGACATAAATGGAGATACTGCTCTGAACTTGGCCTTGAAAGGACACTATACGGAGGTTGCTCTCTGTTTGGTGAATGCAAACCGACAAGCTTCCTTTCTTGCATGTAAAGACGGAATATCTCCCTTGTATTTAGCAGTAGAAGCCAAGGATGCATCACTTGTAAAAGCAATGTTGGGAAATGATGGTCCTCAAAGGAAAAATTTGAACTTAGAAGGGAGAAAATATCTTGCACACGCTGCATTGAATTCCTTGAGCACAGATATCCTTGATGTTATTCTTAATGAATATCCAAGTCTTGTGGATGAGCGAGATGAAGAAGGAAGGACTTGTCTTTCGTTTGGAGCATCCATTGGGTATCATAAAGGAGTATGCAACCTGTTAAACCGATCAAGAAAGGGTGTTTTTGTATGTGATGATGATGGTTCCTATCCAATCCACCTGGCAGTAGAGAAAGGTCGTATTAAAGTTGTCAAAGAGATTTGCAAACGTTGTCCATATTCAAAGCTTTTGCTTAACAAAAAAGGTCAGAACCTCCTTCACATCGCAGCTGAAAGTGGGAAATTTAGAATTCTACGCCACTTGACAGCACATGAACAAATAAACCATCTAGCTAACGAGAAAGATGTGGATGGGAATACACCACTGCATCTAGCCACAATATATTGGCGTCCTCGAGCTGTTCGTGAGCTTGGAGGGAAGAAAAACCTGTTGATACAAAACAATAACGGCTTGGTAGCTCTGGATATTGCTGAGTCAAAACTGCAACCACACTACATCTTTCGAGAGAGGTTGACACTGCTAGCTTTAGTACAACTTCACTTCCAAAATGATCCTAGATGCGCACATACTATGATTCAAACAAGACCAATAATGCCTCAAGGCGGAAACAAAGATTACATCAACGCTCTTCTAGTAGTGGCAGCTCTTATAACCACCGTAACGTTTACGTCTGGATTTACTATACCAGGTGGTTTTAAAGACTCTACTCCAAACGTGGGCATGGCAAATCTAATAACTAACCCTCGTCTCATCCTTTTCCTGATATTTGACATTTTGGCACTGGAAACCTCATTTTTAGCAGTAGTTTCTCTCATATTGGCGCAATTAGGTGATCCGACATTATATCAGAGTTCCGTAAGGGTGGCCATGATATCACTGTATTTCGCTATGTATTTCATGACCTTAGCATTCTTTTTTGTCATGGTTATTGCAGCTGGGAATGTTAGATGGCTTGTTTATGTCATCTTCTGTTTAATTTTCTCCATTTTAACTCTGGCGTTCTCAAGGTTTATGCCTCATCTTCTACTACATTATTGTGGCTCTAGTTATAAGTTGATGATGCCATTTGTTAGTTTTGCAAATTCATGTGATGATGACGGACACGAAAGTCCTCAGTTCTCTGCGCACAAGTCTGAGAAGATCTCAAACAATGATCAAGTTGAAATGTCAGACACTACTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001101 GO:0002376 GO:0002831 GO:0002833 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0005886 GO:0005887 GO:0006464 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0008152 GO:0008219 GO:0009266 GO:0009314 GO:0009409 GO:0009416 GO:0009605 GO:0009607 GO:0009615 GO:0009617 GO:0009628 GO:0009719 GO:0009725 GO:0009751 GO:0009814 GO:0009816 GO:0009966 GO:0009987 GO:0010033 GO:0010646 GO:0012505 GO:0014070 GO:0016020 GO:0016021 GO:0016567 GO:0019538 GO:0023051 GO:0030176 GO:0031224 GO:0031226 GO:0031227 GO:0031347 GO:0031349 GO:0031984 GO:0032101 GO:0032103 GO:0032446 GO:0032870 GO:0035690 GO:0036211 GO:0042175 GO:0042221 GO:0042493 GO:0042742 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043900 GO:0043902 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044459 GO:0044464 GO:0045087 GO:0046677 GO:0048518 GO:0048583 GO:0048584 GO:0050789 GO:0050794 GO:0050826 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0065007 GO:0070647 GO:0070887 GO:0071229 GO:0071236 GO:0071310 GO:0071407 GO:0071446 GO:0071495 GO:0071704 GO:0071944 GO:0080134 GO:0098542 GO:0098827 GO:1900150 GO:1900424 GO:1900426 GO:1901564 GO:1901700 GO:1901701 GO:1902288 GO:1902290 GO:2000031 GO:2001023 GO:2001038
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank Ank_2 Ank_4 Ank_5 PGG

Protein Analysis

683

Amino Acids

76.27

Weight (kDa)

7.07

Isoelectric Point (pI)

40.0

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 96 - 173 3.7e-07 Ankyrin repeats (3 copies)
Ank_2 PF12796 317 - 396 6.3e-08 Ankyrin repeats (3 copies)
Ank_2 PF12796 342 - 427 2.9e-10 Ankyrin repeats (3 copies)
PGG PF13962 493 - 599 3.6e-23 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000494)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G03670 AT4G03440 AT4G03440 AT4G03440 AT4G03450 AT4G03450 AT4G03460 AT4G03460 AT4G03470 AT4G03480 AT4G03480 AT4G03490 AT4G03490 AT4G03490 AT4G03490 AT4G03490 AT4G03500 AT4G03500 AT4G03500 AT4G03505 AT4G05040 AT4G05040 AT4G05040 AT4G05040 AT4G05040 AT4G05040 AT4G05040 AT4G14390 AT4G14390 AT4G14390 AT4G14390 AT4G14400 AT4G14400 AT4G14400
fragaria_vesca FvH4_3g05910 FvH4_3g23320
malus_domestica MD03G1094000.v1.1 MD03G1094200.v1.1 MD03G1094600.v1.1 MD12G1218700.v1.1
prunus_persica Prupe.3G135100_v2.0.a1 Prupe.3G135200_v2.0.a1 Prupe.3G135700_v2.0.a1 Prupe.3G135700_v2.0.a1 Prupe.3G142400_v2.0.a1 Prupe.3G153800_v2.0.a1 Prupe.3G153800_v2.0.a1 Prupe.3G153800_v2.0.a1 Prupe.3G153800_v2.0.a1 Prupe.3G154000_v2.0.a1 Prupe.3G154200_v2.0.a1 Prupe.3G154200_v2.0.a1 Prupe.3G154600_v2.0.a1 Prupe.3G154700_v2.0.a1 Prupe.3G155200_v2.0.a1 Prupe.3G155300_v2.0.a1 Prupe.8G110300_v2.0.a1
pyrus_communis pycom03g07280 pycom03g07580 pycom03g07660 pycom03g07700 pycom03g07710
rosa_chinensis RchiOBHm_Chr3g0461161 RchiOBHm_Chr5g0041111
rosa_laevigata RLG00000023472 RLG00000023475 RLG00000034025
rosa_multiflora Rmu_co8126040.1_g000001 Rmu_co8268563.1_g000001 Rmu_sc0000964.1_g000014 Rmu_sc0028923.1_g000001 Rmu_sc0042194.1_g000001
rosa_roxburghii Rroxscaffold_1G00039610 Rroxscaffold_6G00401360
rosa_rugosa Rorug03G0048600 Rorug03G0048700 Rorug05G0190000
rosa_samantha Rh3AG105900 Rh3BG110200 Rh3BG268400 Rh3CG111800 Rh3DG111900 Rh5AG275800 Rh5BG280500 Rh5CG312600 Rh5DG288800
rosa_wichuraiana Rw3G009080 Rw5G025920

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1520, 1920
AasI GACNNNNNNGTC 1 cut(s) 1977
Acc16I TGCGCA 2 cut(s) 1432, 1995
AciI CCGC 3 cut(s) 164, 266, 1473
AclI AACGTT 2 cut(s) 1078, 1532
AclWI GGATC 3 cut(s) 519, 1415, 1697
AcoI YGGCCR 1 cut(s) 1734
AcsI RAATTY 6 cut(s) 218, 790, 835, 1151, 1158, 1951
AcuI CTGAAG 3 cut(s) 33, 573, 608
AcyI GRCGYC 1 cut(s) 1258
AfaI GTAC 1 cut(s) 1401
AfiI CCNNNNNNNGG 3 cut(s) 439, 1472, 1586
AflIII ACRYGT 1 cut(s) 335
AgsI TTSAA 7 cut(s) 48, 628, 796, 835, 1092, 1448, 2033
AhlI ACTAGT 1 cut(s) 400
AjiI CACGTC 1 cut(s) 20
AjnI CCWGG 3 cut(s) 241, 1029, 1555
AloI GAACNNNNNNTCC 2 cut(s) 348, 380
Alw21I GWGCWC 1 cut(s) 848
Alw26I GTCTC 5 cut(s) 63, 67, 344, 421, 1622
AlwI GGATC 3 cut(s) 519, 1415, 1697
Ama87I CYCGRG 1 cut(s) 1263
AoxI GGCC 2 cut(s) 621, 1734
ApeKI GCWGC 7 cut(s) 166, 377, 479, 827, 1136, 1511, 1802
ApoI RAATTY 6 cut(s) 218, 790, 835, 1151, 1158, 1951
ArsI GACNNNNNNTTYG 2 cut(s) 907, 939
AspLEI GCGC 3 cut(s) 1433, 1693, 1996
AspS9I GGNCC 2 cut(s) 457, 776
AsuHPI GGTGA 3 cut(s) 257, 673, 1712
AsuII TTCGAA 1 cut(s) 142
AsuNHI GCTAGC 1 cut(s) 1390
AvaI CYCGRG 1 cut(s) 1263
AvaII GGWCC 2 cut(s) 457, 776
BalI TGGCCA 1 cut(s) 1736
BauI CACGAG 1 cut(s) 129
BbsI GAAGAC 2 cut(s) 104, 194
Bbv12I GWGCWC 1 cut(s) 848
BbvI GCAGC 7 cut(s) 153, 364, 491, 814, 1148, 1523, 1814
BccI CCATC 5 cut(s) 767, 1004, 1203, 1214, 1812
BceAI ACGGC 1 cut(s) 1333
BciT130I CCWGG 3 cut(s) 243, 1031, 1557
BclI TGATCA 1 cut(s) 2023
BcoDI GTCTC 5 cut(s) 63, 67, 344, 421, 1622
BcuI ACTAGT 1 cut(s) 400
BfaI CTAG 9 cut(s) 395, 401, 543, 1199, 1241, 1391, 1425, 1502, 1914
BglII AGATCT 1 cut(s) 2010
BisI GCNGC 7 cut(s) 167, 378, 480, 828, 1137, 1512, 1803
BlpI GCTNAGC 1 cut(s) 275
BlsI GCNGC 7 cut(s) 168, 379, 481, 829, 1138, 1513, 1804
Bme1390I CCNGG 3 cut(s) 243, 1031, 1557
Bme18I GGWCC 2 cut(s) 457, 776
BmeT110I CYCGRG 1 cut(s) 1263
BmgBI CACGTC 1 cut(s) 20
BmgT120I GGNCC 2 cut(s) 457, 776
BmiI GGNNCC 1 cut(s) 1015
BmrFI CCNGG 3 cut(s) 243, 1031, 1557
BmsI GCATC 7 cut(s) 261, 730, 752, 944, 1246, 1418, 1920
BmtI GCTAGC 1 cut(s) 1394
BpiI GAAGAC 2 cut(s) 104, 194
BplI GAGNNNNNCTC 4 cut(s) 434, 466, 1997, 2029
BpmI CTGGAG 1 cut(s) 323
Bpu10I CCTNAGC 1 cut(s) 1774
Bpu1102I GCTNAGC 1 cut(s) 275
Bpu14I TTCGAA 1 cut(s) 142
BpuEI CTTGAG 4 cut(s) 326, 862, 1452, 1858
BsaHI GRCGYC 1 cut(s) 1258
BsaJI CCNNGG 3 cut(s) 241, 319, 735
BsaXI ACNNNNNCTCC 2 cut(s) 348, 378
Bsc4I CCNNNNNNNGG 3 cut(s) 439, 1472, 1586
Bse1I ACTGG 2 cut(s) 552, 1656
Bse3DI GCAATG 1 cut(s) 765
BseBI CCWGG 3 cut(s) 243, 1031, 1557
BseDI CCNNGG 3 cut(s) 241, 319, 735
BseGI GGATG 6 cut(s) 10, 745, 898, 935, 1225, 1620
BseLI CCNNNNNNNGG 3 cut(s) 439, 1472, 1586
BseMI GCAATG 1 cut(s) 765
BseMII CTCAG 5 cut(s) 136, 552, 1332, 1995, 1997
BseNI ACTGG 2 cut(s) 552, 1656
BseRI GAGGAG 1 cut(s) 369
BseXI GCAGC 7 cut(s) 153, 364, 491, 814, 1148, 1523, 1814
BseYI CCCAGC 1 cut(s) 1805
Bsh1285I CGRYCG 1 cut(s) 352
BshFI GGCC 2 cut(s) 623, 1736
BsiEI CGRYCG 1 cut(s) 352
BsiHKAI GWGCWC 1 cut(s) 848
BsiHKCI CYCGRG 1 cut(s) 1263
BsiSI CCGG 1 cut(s) 197
BslI CCNNNNNNNGG 3 cut(s) 439, 1472, 1586
BsmAI GTCTC 5 cut(s) 63, 67, 344, 421, 1622
BsmBI CGTCTC 2 cut(s) 63, 1622
BsmI GAATGC 3 cut(s) 268, 670, 1778
BsnI GGCC 2 cut(s) 623, 1736
BsoBI CYCGRG 1 cut(s) 1263
Bsp119I TTCGAA 1 cut(s) 142
Bsp1286I GDGCHC 1 cut(s) 848
Bsp143I GATC 9 cut(s) 226, 235, 349, 511, 977, 1420, 1702, 2010, 2023
Bsp1720I GCTNAGC 1 cut(s) 275
Bsp19I CCATGG 1 cut(s) 319
BspACI CCGC 3 cut(s) 164, 266, 1473
BspANI GGCC 2 cut(s) 623, 1736
BspCNI CTCAG 5 cut(s) 135, 551, 1333, 1996, 1996
BspHI TCATGA 2 cut(s) 61, 1767
BspLI GGNNCC 1 cut(s) 1015
BspOI GCTAGC 1 cut(s) 1394
BspPI GGATC 3 cut(s) 519, 1415, 1697
BspQI GCTCTTC 1 cut(s) 1503
BspT104I TTCGAA 1 cut(s) 142
BsrDI GCAATG 1 cut(s) 765
BsrI ACTGG 2 cut(s) 552, 1656
BssECI CCNNGG 3 cut(s) 241, 319, 735
BssMI GATC 9 cut(s) 226, 235, 349, 511, 977, 1420, 1702, 2010, 2023
BssNI GRCGYC 1 cut(s) 1258
BssSI CACGAG 1 cut(s) 129
BssT1I CCWWGG 2 cut(s) 319, 735
Bst2BI CACGAG 1 cut(s) 129
Bst2UI CCWGG 3 cut(s) 243, 1031, 1557
Bst4CI ACNGT 4 cut(s) 110, 193, 1528, 1749
Bst6I CTCTTC 1 cut(s) 1503
BstACI GRCGYC 1 cut(s) 1258
BstAPI GCANNNNNTGC 1 cut(s) 827
BstBI TTCGAA 1 cut(s) 142
BstC8I GCNNGC 1 cut(s) 1392
BstDSI CCRYGG 1 cut(s) 319
BstF5I GGATG 6 cut(s) 10, 745, 898, 935, 1225, 1620
BstHHI GCGC 3 cut(s) 1433, 1693, 1996
BstKTI GATC 9 cut(s) 229, 238, 352, 514, 980, 1423, 1705, 2013, 2026
BstMAI GTCTC 5 cut(s) 63, 67, 344, 421, 1622
BstMBI GATC 9 cut(s) 226, 235, 349, 511, 977, 1420, 1702, 2010, 2023
BstMCI CGRYCG 1 cut(s) 352
BstMWI GCNNNNNNNGC 4 cut(s) 548, 731, 740, 827
BstNI CCWGG 3 cut(s) 243, 1031, 1557
BstNSI RCATGY 2 cut(s) 339, 696
BstSCI CCNGG 3 cut(s) 241, 1029, 1555
BstV1I GCAGC 7 cut(s) 153, 364, 491, 814, 1148, 1523, 1814
BstV2I GAAGAC 2 cut(s) 104, 194
BstX2I RGATCY 2 cut(s) 511, 2010
BstYI RGATCY 2 cut(s) 511, 2010
BsuRI GGCC 2 cut(s) 623, 1736
BtgI CCRYGG 1 cut(s) 319
BtgZI GCGATG 1 cut(s) 1117
BtrI CACGTC 1 cut(s) 20
BtsCI GGATG 6 cut(s) 10, 745, 898, 935, 1225, 1620
BtsI GCAGTG 2 cut(s) 1232, 1385
BtsIMutI CAGTG 4 cut(s) 1232, 1385, 1649, 1745
Cac8I GCNNGC 1 cut(s) 1392
CciI TCATGA 2 cut(s) 61, 1767
CfoI GCGC 3 cut(s) 1433, 1693, 1996
Cfr13I GGNCC 2 cut(s) 457, 776
CseI GACGC 2 cut(s) 510, 1247
CsiI ACCWGGT 1 cut(s) 1555
Csp6I GTAC 1 cut(s) 1400
CspCI CAANNNNNGTGG 2 cut(s) 870, 905
CviQI GTAC 1 cut(s) 1400
DpnI GATC 9 cut(s) 228, 237, 351, 513, 979, 1422, 1704, 2012, 2025
DpnII GATC 9 cut(s) 226, 235, 349, 511, 977, 1420, 1702, 2010, 2023
DraI TTTAAA 1 cut(s) 1567
DrdI GACNNNNNNGTC 1 cut(s) 1977
DseDI GACNNNNNNGTC 1 cut(s) 1977
EaeI YGGCCR 1 cut(s) 1734
Eam1104I CTCTTC 1 cut(s) 1503
EarI CTCTTC 1 cut(s) 1503
EciI GGCGGA 1 cut(s) 1488
Eco130I CCWWGG 2 cut(s) 319, 735
Eco32I GATATC 2 cut(s) 853, 1743
Eco47I GGWCC 2 cut(s) 457, 776
Eco57I CTGAAG 3 cut(s) 33, 573, 608
Eco88I CYCGRG 1 cut(s) 1263
EcoRI GAATTC 2 cut(s) 835, 1158
EcoRII CCWGG 3 cut(s) 241, 1029, 1555
EcoRV GATATC 2 cut(s) 853, 1743
EcoT14I CCWWGG 2 cut(s) 319, 735
EcoT22I ATGCAT 1 cut(s) 745
ErhI CCWWGG 2 cut(s) 319, 735
Esp3I CGTCTC 2 cut(s) 63, 1622
FbaI TGATCA 1 cut(s) 2023
Fnu4HI GCNGC 7 cut(s) 167, 378, 480, 828, 1137, 1512, 1803
FokI GGATG 6 cut(s) 17, 752, 905, 922, 1232, 1607
Fsp4HI GCNGC 7 cut(s) 167, 378, 480, 828, 1137, 1512, 1803
FspAI RTGCGCAY 1 cut(s) 1432
FspBI CTAG 9 cut(s) 395, 401, 543, 1199, 1241, 1391, 1425, 1502, 1914
FspI TGCGCA 2 cut(s) 1432, 1995
GlaI GCGC 3 cut(s) 1432, 1692, 1995
GluI GCNGC 7 cut(s) 167, 378, 480, 828, 1137, 1512, 1803
GsaI CCCAGC 1 cut(s) 1809
GsuI CTGGAG 1 cut(s) 323
HaeIII GGCC 2 cut(s) 623, 1736
HapII CCGG 1 cut(s) 197
HgaI GACGC 2 cut(s) 510, 1247
HhaI GCGC 3 cut(s) 1433, 1693, 1996
Hin1I GRCGYC 1 cut(s) 1258
Hin6I GCGC 3 cut(s) 1431, 1691, 1994
HinP1I GCGC 3 cut(s) 1431, 1691, 1994
HincII GTYRAC 1 cut(s) 1383
HindII GTYRAC 1 cut(s) 1383
HindIII AAGCTT 2 cut(s) 678, 1094
HinfI GANTC 9 cut(s) 35, 53, 359, 388, 443, 574, 1343, 1444, 1571
HpaII CCGG 1 cut(s) 197
HphI GGTGA 3 cut(s) 257, 673, 1712
Hpy166II GTNNAC 3 cut(s) 128, 1383, 1536
Hpy8I GTNNAC 3 cut(s) 128, 1383, 1536
Hpy99I CGWCG 1 cut(s) 526
HpyAV CCTTC 7 cut(s) 149, 443, 583, 797, 902, 906, 1136
HpyCH4III ACNGT 4 cut(s) 110, 193, 1528, 1749
HpyCH4IV ACGT 5 cut(s) 19, 1078, 1532, 1538, 1584
HpyF10VI GCNNNNNNNGC 4 cut(s) 548, 731, 740, 827
HpySE526I ACGT 5 cut(s) 19, 1078, 1532, 1538, 1584
Hsp92I GRCGYC 1 cut(s) 1258
HspAI GCGC 3 cut(s) 1431, 1691, 1994
Ksp22I TGATCA 1 cut(s) 2023
Kzo9I GATC 9 cut(s) 226, 235, 349, 511, 977, 1420, 1702, 2010, 2023
LguI GCTCTTC 1 cut(s) 1503
LmnI GCTCC 1 cut(s) 932
Lsp1109I GCAGC 7 cut(s) 153, 364, 491, 814, 1148, 1523, 1814
LweI GCATC 7 cut(s) 261, 730, 752, 944, 1246, 1418, 1920
MabI ACCWGGT 1 cut(s) 1555
MaeI CTAG 9 cut(s) 395, 401, 543, 1199, 1241, 1391, 1425, 1502, 1914
MaeII ACGT 5 cut(s) 19, 1078, 1532, 1538, 1584
MaeIII GTNAC 4 cut(s) 36, 491, 526, 1528
MalI GATC 9 cut(s) 228, 237, 351, 513, 979, 1422, 1704, 2012, 2025
MboI GATC 9 cut(s) 226, 235, 349, 511, 977, 1420, 1702, 2010, 2023
MfeI CAATTG 1 cut(s) 48
MflI RGATCY 2 cut(s) 511, 2010
MhlI GDGCHC 1 cut(s) 848
MlsI TGGCCA 1 cut(s) 1736
MluNI TGGCCA 1 cut(s) 1736
MlyI GAGTC 5 cut(s) 44, 397, 452, 1352, 1565
MmeI TCCRAC 1 cut(s) 1730
Mox20I TGGCCA 1 cut(s) 1736
Mph1103I ATGCAT 1 cut(s) 745
MscI TGGCCA 1 cut(s) 1736
MslI CAYNNNNRTG 2 cut(s) 334, 1905
Msp20I TGGCCA 1 cut(s) 1736
MspA1I CMGCKG 3 cut(s) 166, 1139, 1805
MspI CCGG 1 cut(s) 197
MspR9I CCNGG 3 cut(s) 243, 1031, 1557
MunI CAATTG 1 cut(s) 48
Mva1269I GAATGC 3 cut(s) 268, 670, 1778
MvaI CCWGG 3 cut(s) 243, 1031, 1557
MwoI GCNNNNNNNGC 4 cut(s) 548, 731, 740, 827
NcoI CCATGG 1 cut(s) 319
NdeII GATC 9 cut(s) 226, 235, 349, 511, 977, 1420, 1702, 2010, 2023
NheI GCTAGC 1 cut(s) 1390
NlaIV GGNNCC 1 cut(s) 1015
NmuCI GTSAC 2 cut(s) 36, 491
NsbI TGCGCA 2 cut(s) 1432, 1995
NsiI ATGCAT 1 cut(s) 745
NspI RCATGY 2 cut(s) 339, 696
NspV TTCGAA 1 cut(s) 142
PaeR7I CTCGAG 1 cut(s) 1263
PagI TCATGA 2 cut(s) 61, 1767
PciI ACATGT 1 cut(s) 335
PciSI GCTCTTC 1 cut(s) 1503
PcsI WCGNNNNNNNCGW 1 cut(s) 1270
PctI GAATGC 3 cut(s) 268, 670, 1778
PfeI GAWTC 4 cut(s) 53, 359, 574, 1444
PkrI GCNGC 7 cut(s) 168, 379, 481, 829, 1138, 1513, 1804
Ple19I CGATCG 1 cut(s) 352
PleI GAGTC 5 cut(s) 43, 396, 451, 1351, 1565
PpsI GAGTC 5 cut(s) 43, 396, 451, 1351, 1565
PscI ACATGT 1 cut(s) 335
PsiI TTATAA 2 cut(s) 1520, 1920
Psp1406I AACGTT 2 cut(s) 1078, 1532
Psp6I CCWGG 3 cut(s) 241, 1029, 1555
PspFI CCCAGC 1 cut(s) 1805
PspGI CCWGG 3 cut(s) 241, 1029, 1555
PspN4I GGNNCC 1 cut(s) 1015
PspPI GGNCC 2 cut(s) 457, 776
PspXI VCTCGAGB 1 cut(s) 1263
PsuI RGATCY 2 cut(s) 511, 2010
PvuI CGATCG 1 cut(s) 352
PvuII CAGCTG 2 cut(s) 1139, 1805
RsaI GTAC 1 cut(s) 1401
RsaNI GTAC 1 cut(s) 1400
RseI CAYNNNNRTG 2 cut(s) 334, 1905
SapI GCTCTTC 1 cut(s) 1503
SatI GCNGC 7 cut(s) 167, 378, 480, 828, 1137, 1512, 1803
Sau3AI GATC 9 cut(s) 226, 235, 349, 511, 977, 1420, 1702, 2010, 2023
Sau96I GGNCC 2 cut(s) 457, 776
SchI GAGTC 5 cut(s) 44, 397, 452, 1352, 1565
ScrFI CCNGG 3 cut(s) 243, 1031, 1557
SduI GDGCHC 1 cut(s) 848
SexAI ACCWGGT 1 cut(s) 1555
SfaNI GCATC 7 cut(s) 261, 730, 752, 944, 1246, 1418, 1920
Sfr274I CTCGAG 1 cut(s) 1263
SfuI TTCGAA 1 cut(s) 142
SinI GGWCC 2 cut(s) 457, 776
SlaI CTCGAG 1 cut(s) 1263
SmiMI CAYNNNNRTG 2 cut(s) 334, 1905
SmlI CTYRAG 5 cut(s) 341, 841, 1263, 1467, 1873
SmoI CTYRAG 5 cut(s) 341, 841, 1263, 1467, 1873
SpeI ACTAGT 1 cut(s) 400
SsiI CCGC 3 cut(s) 164, 266, 1473
SspMI CTAG 9 cut(s) 395, 401, 543, 1199, 1241, 1391, 1425, 1502, 1914
StyD4I CCNGG 3 cut(s) 241, 1029, 1555
StyI CCWWGG 2 cut(s) 319, 735
TaaI ACNGT 4 cut(s) 110, 193, 1528, 1749
TaiI ACGT 5 cut(s) 22, 1081, 1535, 1541, 1587
TaqI TCGA 6 cut(s) 142, 234, 352, 484, 1264, 1372
TatI WGTACW 1 cut(s) 1399
TfiI GAWTC 4 cut(s) 53, 359, 574, 1444
TscAI CASTG 4 cut(s) 1239, 1392, 1656, 1752
TseFI GTSAC 2 cut(s) 36, 491
TseI GCWGC 7 cut(s) 166, 377, 479, 827, 1136, 1511, 1802
Tsp45I GTSAC 2 cut(s) 36, 491
TspGWI ACGGA 4 cut(s) 656, 717, 1714, 1983
TspRI CASTG 4 cut(s) 1239, 1392, 1656, 1752
VpaK11BI GGWCC 2 cut(s) 457, 776
XapI RAATTY 6 cut(s) 218, 790, 835, 1151, 1158, 1951
XbaI TCTAGA 1 cut(s) 394
XceI RCATGY 2 cut(s) 339, 696
XcmI CCANNNNNNNNNTGG 1 cut(s) 1861
XhoI CTCGAG 1 cut(s) 1263
XspI CTAG 9 cut(s) 395, 401, 543, 1199, 1241, 1391, 1425, 1502, 1914
Zsp2I ATGCAT 1 cut(s) 745
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.