AT4G03490

ankyrin repeat family protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
OG0000494
Physical Location & Seq
Reverse (-)
1549176 .. 1554159
4984 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G03490.2

Sequence Viewer

Length: 1989 bp
ATGGGTAAGGTTCAAGAGTTTGAAAAGGTTATGGAGGAGAATGAAATTCCTGTTCTTGATCAGGTCACTTTTCAGGGGAATACGATTCTGCATCTTGCAGCTATTTATGGTCATGACCACCTAGTGCGGCGTATCCTTGCCTATGAGCTAAACATTCTTAGAAATTGGAAACGTGGCTTAAATTGCAACTTCGTCCCAAGTTTCTCTCATTATCAGACTCTTTTGGTGAGACGAAACTACAAGGGAGACCTTGCTCTCCATGTAGCAGCTGCTGCAGGACACAAGTTGATAGTTGGCCTTCTTATTGATTGCCTAAGGCAGCTTCCGCAAGATATAACTATGGTGATTGGATCAGAGCAAATGGTAATTGGAAACATTTTCAGAGTTTCCAACAATGATGGGAATACTGCATTGCACCTCTCCCTGAAAGGAAACCATGTATCTGTTTCTTTGCAACTTGTTCGTGAAGATCGTAGCACTTGCTTTCTTCTGGACAAGGAGGATGTATCTCCACTGTATATGGCAGCTGAAGCTGGATATGTTTCACTTGTGGAGCATATGTTACGGGGTTTGGATGCAAGCTTTGTTGGGAAATCCGTTTTGTGTGCTGCAGTGAAAAGCCAGAATCTTGATATATTGACAGCTGTATTAGAGAGTGACTCAGATCTGGTAGAATCGAGGGATGAAGATGGAAGAACTCCACTTGCCACTGCAGCATCCATTGGTTATGACATTGGAGTGCAGCATATGCTAACCAGATTTGCAAGTTCTACACAGGTTGCTTACATTAAGAATGAAGATGGTTCTTTCCCCATCCACTCAGCCTGCAGTGCTAGGTGCACCTCAGCTCTCAAGGTGATCTTAAAACACCACCCAGACACAATAGAAATGCTTAACTCACAGGGTCAAAACGTTCTTCATGTCGCTGCTAAAAGCGGGAATGCACGAGCTGTTGGCTATCTGCTCAGAAAATCTGACGTCAAAAGGTTAATCAATGAACAAGACATAGAAGGAAACACACCGTTACATTTAGCCAGCAGTAATTCTCATCCCAAGGTTTGGTTGATATGGATGGCATTGGTGGCTGCTGGTACCACTAGAGCTCCACGAGTTCATCTGAGAGCAGACATCCCTGGTCTGACAACAGATGAGGACTTAATCCTAAAAATTCACAAGGATAGAGTAAACACTCTCCTTGTGGTGGCAACACTAGTGGCTACAATGGCTTTTGCTGCAGGCTTGAGTGTGCCACTAGGTTACAACAGCACAGAGTTCAAGTCAAATGTCAAACATTCTTACGAAGAATCTGCATTTCATGCTTTTGTCATCTGCAATAGCATTGCCGTATATACTGCTGTTATATCGACAGTTGCTCTTATAGGGACACAATTGGCTGACCTAAAATGCATGCTGACCACCTTCAAGTTTATTGTGCCACTCCTGGGGTTTTCTATTATCGCCATGTCTTTGGCTTTTGTTGCAGGCTTATACCTGGTCTTGGGACATCATTATTGGCTTGCCATATTTGTCTTGGCCTCAGGCGGTTTCTATCTCATGGCTCTACTTCTGCTCATCATCCCTTACGCTTCGCCTTATACTTTTACACTATCAAGAAGCCTGAATTCTTTAGTACAGAATATGTCGAAGGAAGATGTTGATTCCGTAAATCAACTAGTTCCTGCACCAACAGAAGAGTTGGCATTGATCAAAGCCATCCAAGTCAATCGCTGTATACAAGGTAATATTGGGGTCACCTCTATGATGGTCCCAAGAAAACATACTCACAACTTTAGGGTGCCAGTTTTGGTGGCTAGACAGCAAAATAATAGCGGCTTGACAGCTCTGGATATCGCCGAACTAAATCCCAACCCCACTACATCTTTTGAGAGAAACCGACTAAGAGTTTGGCTCTGTGTCTTCTCTTGTTTTGGGATTTCTTATCGCCAGCTTGGTGCTACTGTTCAGTTTTTCATATGTGAGAAAACATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001101 GO:0002376 GO:0002831 GO:0002833 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0005886 GO:0005887 GO:0006464 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0008152 GO:0008219 GO:0009266 GO:0009314 GO:0009409 GO:0009416 GO:0009605 GO:0009607 GO:0009615 GO:0009617 GO:0009628 GO:0009719 GO:0009725 GO:0009751 GO:0009814 GO:0009816 GO:0009966 GO:0009987 GO:0010033 GO:0010646 GO:0012505 GO:0014070 GO:0016020 GO:0016021 GO:0016567 GO:0019538 GO:0023051 GO:0030176 GO:0031224 GO:0031226 GO:0031227 GO:0031347 GO:0031349 GO:0031984 GO:0032101 GO:0032103 GO:0032446 GO:0032870 GO:0035690 GO:0036211 GO:0042175 GO:0042221 GO:0042493 GO:0042742 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043900 GO:0043902 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044459 GO:0044464 GO:0045087 GO:0046677 GO:0048518 GO:0048583 GO:0048584 GO:0050789 GO:0050794 GO:0050826 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0065007 GO:0070647 GO:0070887 GO:0071229 GO:0071236 GO:0071310 GO:0071407 GO:0071446 GO:0071495 GO:0071704 GO:0071944 GO:0080134 GO:0098542 GO:0098827 GO:1900150 GO:1900424 GO:1900426 GO:1901564 GO:1901700 GO:1901701 GO:1902288 GO:1902290 GO:2000031 GO:2001023 GO:2001038
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank Ank_2 Ank_4 Ank_5 PGG

Protein Analysis

662

Amino Acids

72.94

Weight (kDa)

7.65

Isoelectric Point (pI)

37.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 10 - 93 7e-06 Ankyrin repeats (3 copies)
Ank_2 PF12796 162 - 234 4.9e-06 Ankyrin repeats (3 copies)
Ank_2 PF12796 252 - 317 1.3e-07 Ankyrin repeats (3 copies)
Ank_2 PF12796 288 - 343 1.5e-07 Ankyrin repeats (3 copies)
PGG PF13962 381 - 489 5.3e-23 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000494)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G03670 AT4G03440 AT4G03440 AT4G03440 AT4G03450 AT4G03450 AT4G03460 AT4G03460 AT4G03470 AT4G03480 AT4G03480 AT4G03490 AT4G03490 AT4G03490 AT4G03490 AT4G03490 AT4G03500 AT4G03500 AT4G03500 AT4G03505 AT4G05040 AT4G05040 AT4G05040 AT4G05040 AT4G05040 AT4G05040 AT4G05040 AT4G14390 AT4G14390 AT4G14390 AT4G14390 AT4G14400 AT4G14400 AT4G14400
fragaria_vesca FvH4_3g05910 FvH4_3g23320
malus_domestica MD03G1094000.v1.1 MD03G1094200.v1.1 MD03G1094600.v1.1 MD12G1218700.v1.1
prunus_persica Prupe.3G135100_v2.0.a1 Prupe.3G135200_v2.0.a1 Prupe.3G135700_v2.0.a1 Prupe.3G135700_v2.0.a1 Prupe.3G142400_v2.0.a1 Prupe.3G153800_v2.0.a1 Prupe.3G153800_v2.0.a1 Prupe.3G153800_v2.0.a1 Prupe.3G153800_v2.0.a1 Prupe.3G154000_v2.0.a1 Prupe.3G154200_v2.0.a1 Prupe.3G154200_v2.0.a1 Prupe.3G154600_v2.0.a1 Prupe.3G154700_v2.0.a1 Prupe.3G155200_v2.0.a1 Prupe.3G155300_v2.0.a1 Prupe.8G110300_v2.0.a1
pyrus_communis pycom03g07280 pycom03g07580 pycom03g07660 pycom03g07700 pycom03g07710
rosa_chinensis RchiOBHm_Chr3g0461161 RchiOBHm_Chr5g0041111
rosa_laevigata RLG00000023472 RLG00000023475 RLG00000034025
rosa_multiflora Rmu_co8126040.1_g000001 Rmu_co8268563.1_g000001 Rmu_sc0000964.1_g000014 Rmu_sc0028923.1_g000001 Rmu_sc0042194.1_g000001
rosa_roxburghii Rroxscaffold_1G00039610 Rroxscaffold_6G00401360
rosa_rugosa Rorug03G0048600 Rorug03G0048700 Rorug05G0190000
rosa_samantha Rh3AG105900 Rh3BG110200 Rh3BG268400 Rh3CG111800 Rh3DG111900 Rh5AG275800 Rh5BG280500 Rh5CG312600 Rh5DG288800
rosa_wichuraiana Rw3G009080 Rw5G025920

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 981
Acc65I GGTACC 1 cut(s) 1091
AccB1I GGYRCC 2 cut(s) 1091, 1795
AccB7I CCANNNNNTGG 1 cut(s) 1059
AccI GTMKAC 1 cut(s) 1732
AciI CCGC 5 cut(s) 127, 326, 936, 1542, 1830
AclI AACGTT 1 cut(s) 912
AclWI GGATC 1 cut(s) 358
AcsI RAATTY 3 cut(s) 45, 1167, 1621
AcuI CTGAAG 1 cut(s) 549
AcyI GRCGYC 1 cut(s) 978
AdeI CACNNNGTG 1 cut(s) 124
AfaI GTAC 2 cut(s) 1093, 1632
AfiI CCNNNNNNNGG 4 cut(s) 1059, 1201, 1442, 1498
AgsI TTSAA 4 cut(s) 14, 23, 1276, 1423
AhlI ACTAGT 2 cut(s) 1210, 1672
AjnI CCWGG 3 cut(s) 1132, 1440, 1491
Alw21I GWGCWC 2 cut(s) 842, 1105
Alw26I GTCTC 2 cut(s) 223, 240
Alw44I GTGCAC 1 cut(s) 838
AlwI GGATC 1 cut(s) 358
AlwNI CAGNNNCTG 1 cut(s) 272
AoxI GGCC 2 cut(s) 295, 1533
ApaLI GTGCAC 1 cut(s) 838
ApoI RAATTY 3 cut(s) 45, 1167, 1621
ArsI GACNNNNNNTTYG 2 cut(s) 1887, 1919
Asp718I GGTACC 1 cut(s) 1091
AspS9I GGNCC 1 cut(s) 1765
AsuHPI GGTGA 4 cut(s) 238, 355, 868, 1744
AvaII GGWCC 1 cut(s) 1765
AxyI CCTNAGG 2 cut(s) 314, 1537
BaeGI GKGCMC 1 cut(s) 842
BanI GGYRCC 2 cut(s) 1091, 1795
BanII GRGCYC 1 cut(s) 1105
BauI CACGAG 2 cut(s) 945, 1107
BbsI GAAGAC 1 cut(s) 1909
Bbv12I GWGCWC 2 cut(s) 842, 1105
BbvCI CCTCAGC 1 cut(s) 844
BccI CCATC 7 cut(s) 392, 683, 794, 821, 1066, 1721, 1756
BceAI ACGGC 1 cut(s) 1328
BcgI CGANNNNNNTGC 4 cut(s) 443, 477, 1289, 1323
BciT130I CCWGG 3 cut(s) 1134, 1442, 1493
BciVI GTATCC 1 cut(s) 143
BclI TGATCA 2 cut(s) 58, 1704
BcoDI GTCTC 2 cut(s) 223, 240
BcuI ACTAGT 2 cut(s) 1210, 1672
BfaI CTAG 7 cut(s) 122, 834, 1098, 1211, 1253, 1673, 1812
BfmI CTRYAG 5 cut(s) 273, 609, 711, 826, 1233
BfuI GTATCC 1 cut(s) 143
BglII AGATCT 1 cut(s) 664
Bme1390I CCNGG 3 cut(s) 1134, 1442, 1493
Bme18I GGWCC 1 cut(s) 1765
BmgT120I GGNCC 1 cut(s) 1765
BmiI GGNNCC 3 cut(s) 1093, 1767, 1797
BmrFI CCNGG 3 cut(s) 1134, 1442, 1493
BmsI GCATC 3 cut(s) 100, 565, 725
BpiI GAAGAC 1 cut(s) 1909
BplI GAGNNNNNCTC 4 cut(s) 644, 676, 1893, 1925
Bpu10I CCTNAGC 1 cut(s) 844
BpuEI CTTGAG 2 cut(s) 836, 1261
BsaHI GRCGYC 1 cut(s) 978
BsaI GGTCTC 1 cut(s) 240
BsaJI CCNNGG 3 cut(s) 1053, 1132, 1441
BsaXI ACNNNNNCTCC 4 cut(s) 545, 575, 1087, 1117
Bsc4I CCNNNNNNNGG 4 cut(s) 1059, 1201, 1442, 1498
Bse1I ACTGG 1 cut(s) 1799
Bse21I CCTNAGG 2 cut(s) 314, 1537
Bse3DI GCAATG 2 cut(s) 410, 1338
BseBI CCWGG 3 cut(s) 1134, 1442, 1493
BseDI CCNNGG 3 cut(s) 1053, 1132, 1441
BseLI CCNNNNNNNGG 4 cut(s) 1059, 1201, 1442, 1498
BseMI GCAATG 2 cut(s) 410, 1338
BseMII CTCAG 6 cut(s) 675, 834, 858, 979, 1109, 1551
BseNI ACTGG 1 cut(s) 1799
BseRI GAGGAG 1 cut(s) 50
BseSI GKGCMC 1 cut(s) 842
BsgI GTGCAG 2 cut(s) 761, 1665
BshFI GGCC 2 cut(s) 297, 1535
BshNI GGYRCC 2 cut(s) 1091, 1795
BsiHKAI GWGCWC 2 cut(s) 842, 1105
BslFI GGGAC 4 cut(s) 179, 1396, 1515, 1751
BslI CCNNNNNNNGG 4 cut(s) 1059, 1201, 1442, 1498
BsmAI GTCTC 2 cut(s) 223, 240
BsmBI CGTCTC 1 cut(s) 223
BsmFI GGGAC 4 cut(s) 179, 1396, 1515, 1751
BsmI GAATGC 1 cut(s) 946
BsnI GGCC 2 cut(s) 297, 1535
Bso31I GGTCTC 1 cut(s) 240
Bsp1286I GDGCHC 2 cut(s) 842, 1105
Bsp143I GATC 6 cut(s) 58, 350, 469, 664, 858, 1704
BspACI CCGC 5 cut(s) 127, 326, 936, 1542, 1830
BspANI GGCC 2 cut(s) 297, 1535
BspCNI CTCAG 6 cut(s) 674, 833, 857, 978, 1110, 1550
BspHI TCATGA 1 cut(s) 112
BspLI GGNNCC 3 cut(s) 1093, 1767, 1797
BspMAI CTGCAG 5 cut(s) 277, 613, 715, 830, 1237
BspPI GGATC 1 cut(s) 358
BspT107I GGYRCC 2 cut(s) 1091, 1795
BspTNI GGTCTC 1 cut(s) 240
BsrDI GCAATG 2 cut(s) 410, 1338
BsrI ACTGG 1 cut(s) 1799
BssECI CCNNGG 3 cut(s) 1053, 1132, 1441
BssMI GATC 6 cut(s) 58, 350, 469, 664, 858, 1704
BssNAI GTATAC 1 cut(s) 1733
BssNI GRCGYC 1 cut(s) 978
BssSI CACGAG 2 cut(s) 945, 1107
BssT1I CCWWGG 1 cut(s) 1053
Bst1107I GTATAC 1 cut(s) 1733
Bst2BI CACGAG 2 cut(s) 945, 1107
Bst2UI CCWGG 3 cut(s) 1134, 1442, 1493
Bst4CI ACNGT 4 cut(s) 516, 1023, 1369, 1960
Bst6I CTCTTC 1 cut(s) 1686
BstACI GRCGYC 1 cut(s) 978
BstAPI GCANNNNNTGC 3 cut(s) 272, 748, 1316
BstC8I GCNNGC 8 cut(s) 580, 826, 1036, 1237, 1409, 1483, 1518, 1946
BstDEI CTNAG 9 cut(s) 158, 314, 661, 820, 844, 965, 1118, 1537, 1898
BstEII GGTNACC 1 cut(s) 1750
BstKTI GATC 6 cut(s) 61, 353, 472, 667, 861, 1707
BstMAI GTCTC 2 cut(s) 223, 240
BstMBI GATC 6 cut(s) 58, 350, 469, 664, 858, 1704
BstNI CCWGG 3 cut(s) 1134, 1442, 1493
BstNSI RCATGY 1 cut(s) 1411
BstPI GGTNACC 1 cut(s) 1750
BstSCI CCNGG 3 cut(s) 1132, 1440, 1491
BstSFI CTRYAG 5 cut(s) 273, 609, 711, 826, 1233
BstSLI GKGCMC 1 cut(s) 842
BstV2I GAAGAC 1 cut(s) 1909
BstX2I RGATCY 1 cut(s) 664
BstXI CCANNNNNNTGG 1 cut(s) 1468
BstYI RGATCY 1 cut(s) 664
BstZ17I GTATAC 1 cut(s) 1733
Bsu36I CCTNAGG 2 cut(s) 314, 1537
BsuI GTATCC 1 cut(s) 143
BsuRI GGCC 2 cut(s) 297, 1535
BtsI GCAGTG 3 cut(s) 618, 708, 835
BtsIMutI CAGTG 4 cut(s) 512, 618, 708, 835
Cac8I GCNNGC 8 cut(s) 580, 826, 1036, 1237, 1409, 1483, 1518, 1946
CaiI CAGNNNCTG 1 cut(s) 272
CciI TCATGA 1 cut(s) 112
Cfr13I GGNCC 1 cut(s) 1765
CsiI ACCWGGT 1 cut(s) 1491
Csp6I GTAC 2 cut(s) 1092, 1631
CspCI CAANNNNNGTGG 2 cut(s) 1194, 1229
CviAII CATG 8 cut(s) 113, 260, 437, 920, 1316, 1408, 1462, 1555
CviQI GTAC 2 cut(s) 1092, 1631
DdeI CTNAG 9 cut(s) 158, 314, 661, 820, 844, 965, 1118, 1537, 1898
DpnI GATC 6 cut(s) 60, 352, 471, 666, 860, 1706
DpnII GATC 6 cut(s) 58, 350, 469, 664, 858, 1704
DraIII CACNNNGTG 1 cut(s) 124
Eam1104I CTCTTC 1 cut(s) 1686
EarI CTCTTC 1 cut(s) 1686
Ecl136II GAGCTC 1 cut(s) 1103
Eco130I CCWWGG 1 cut(s) 1053
Eco24I GRGCYC 1 cut(s) 1105
Eco31I GGTCTC 1 cut(s) 240
Eco32I GATATC 1 cut(s) 1849
Eco47I GGWCC 1 cut(s) 1765
Eco53kI GAGCTC 1 cut(s) 1103
Eco57I CTGAAG 1 cut(s) 549
Eco81I CCTNAGG 2 cut(s) 314, 1537
Eco91I GGTNACC 1 cut(s) 1750
EcoICRI GAGCTC 1 cut(s) 1103
EcoO65I GGTNACC 1 cut(s) 1750
EcoRI GAATTC 1 cut(s) 1621
EcoRII CCWGG 3 cut(s) 1132, 1440, 1491
EcoRV GATATC 1 cut(s) 1849
EcoT14I CCWWGG 1 cut(s) 1053
EcoT22I ATGCAT 1 cut(s) 1409
EcoT38I GRGCYC 1 cut(s) 1105
ErhI CCWWGG 1 cut(s) 1053
Esp3I CGTCTC 1 cut(s) 223
FaeI CATG 8 cut(s) 116, 263, 440, 923, 1319, 1411, 1465, 1558
FalI AAGNNNNNCTT 2 cut(s) 845, 877
FaqI GGGAC 4 cut(s) 179, 1396, 1515, 1751
FatI CATG 8 cut(s) 112, 259, 436, 919, 1315, 1407, 1461, 1554
FauI CCCGC 1 cut(s) 929
FauNDI CATATG 3 cut(s) 558, 747, 1973
FbaI TGATCA 2 cut(s) 58, 1704
FblI GTMKAC 1 cut(s) 1732
FriOI GRGCYC 1 cut(s) 1105
FspBI CTAG 7 cut(s) 122, 834, 1098, 1211, 1253, 1673, 1812
HaeIII GGCC 2 cut(s) 297, 1535
Hin1I GRCGYC 1 cut(s) 978
Hin1II CATG 8 cut(s) 116, 263, 440, 923, 1319, 1411, 1465, 1558
HindIII AAGCTT 1 cut(s) 580
HinfI GANTC 7 cut(s) 85, 217, 625, 659, 674, 1304, 1658
HphI GGTGA 4 cut(s) 238, 355, 868, 1744
Hpy166II GTNNAC 3 cut(s) 840, 1186, 1733
Hpy188I TCNGA 8 cut(s) 216, 355, 383, 664, 968, 976, 1119, 1140
Hpy188III TCNNGA 8 cut(s) 14, 56, 113, 464, 491, 629, 1611, 1844
Hpy8I GTNNAC 3 cut(s) 840, 1186, 1733
HpyAV CCTTC 4 cut(s) 308, 1004, 1429, 1639
HpyCH4III ACNGT 4 cut(s) 516, 1023, 1369, 1960
HpyCH4IV ACGT 3 cut(s) 172, 912, 978
HpyF3I CTNAG 9 cut(s) 158, 314, 661, 820, 844, 965, 1118, 1537, 1898
HpySE526I ACGT 3 cut(s) 172, 912, 978
Hsp92I GRCGYC 1 cut(s) 978
Hsp92II CATG 8 cut(s) 116, 263, 440, 923, 1319, 1411, 1465, 1558
KpnI GGTACC 1 cut(s) 1095
Ksp22I TGATCA 2 cut(s) 58, 1704
Kzo9I GATC 6 cut(s) 58, 350, 469, 664, 858, 1704
LmnI GCTCC 2 cut(s) 553, 1108
LweI GCATC 3 cut(s) 100, 565, 725
MabI ACCWGGT 1 cut(s) 1491
MaeI CTAG 7 cut(s) 122, 834, 1098, 1211, 1253, 1673, 1812
MaeII ACGT 3 cut(s) 172, 912, 978
MaeIII GTNAC 6 cut(s) 64, 561, 656, 1023, 1256, 1750
MalI GATC 6 cut(s) 60, 352, 471, 666, 860, 1706
MboI GATC 6 cut(s) 58, 350, 469, 664, 858, 1704
MfeI CAATTG 1 cut(s) 1388
MflI RGATCY 1 cut(s) 664
MhlI GDGCHC 2 cut(s) 842, 1105
MluCI AATT 8 cut(s) 45, 163, 181, 366, 1042, 1167, 1388, 1621
MlyI GAGTC 2 cut(s) 211, 653
MmeI TCCRAC 1 cut(s) 414
MnlI CCTC 8 cut(s) 28, 428, 493, 672, 853, 1144, 1546, 1765
Mph1103I ATGCAT 1 cut(s) 1409
MseI TTAA 6 cut(s) 179, 789, 863, 894, 989, 1157
MslI CAYNNNNRTG 2 cut(s) 737, 1757
MspA1I CMGCKG 3 cut(s) 269, 527, 644
MspR9I CCNGG 3 cut(s) 1134, 1442, 1493
MunI CAATTG 1 cut(s) 1388
Mva1269I GAATGC 1 cut(s) 946
MvaI CCWGG 3 cut(s) 1134, 1442, 1493
NdeI CATATG 3 cut(s) 558, 747, 1973
NdeII GATC 6 cut(s) 58, 350, 469, 664, 858, 1704
NlaIII CATG 8 cut(s) 116, 263, 440, 923, 1319, 1411, 1465, 1558
NlaIV GGNNCC 3 cut(s) 1093, 1767, 1797
NmuCI GTSAC 3 cut(s) 64, 656, 1750
NsiI ATGCAT 1 cut(s) 1409
NspI RCATGY 1 cut(s) 1411
PaeI GCATGC 1 cut(s) 1411
PagI TCATGA 1 cut(s) 112
PcsI WCGNNNNNNNCGW 1 cut(s) 469
PctI GAATGC 1 cut(s) 946
PfeI GAWTC 5 cut(s) 85, 625, 674, 1304, 1658
PflMI CCANNNNNTGG 1 cut(s) 1059
PleI GAGTC 2 cut(s) 211, 653
PpsI GAGTC 2 cut(s) 211, 653
Psp124BI GAGCTC 1 cut(s) 1105
Psp1406I AACGTT 1 cut(s) 912
Psp6I CCWGG 3 cut(s) 1132, 1440, 1491
PspEI GGTNACC 1 cut(s) 1750
PspGI CCWGG 3 cut(s) 1132, 1440, 1491
PspN4I GGNNCC 3 cut(s) 1093, 1767, 1797
PspPI GGNCC 1 cut(s) 1765
PstI CTGCAG 5 cut(s) 277, 613, 715, 830, 1237
PstNI CAGNNNCTG 1 cut(s) 272
PsuI RGATCY 1 cut(s) 664
PvuII CAGCTG 3 cut(s) 269, 527, 644
RsaI GTAC 2 cut(s) 1093, 1632
RsaNI GTAC 2 cut(s) 1092, 1631
RseI CAYNNNNRTG 2 cut(s) 737, 1757
SacI GAGCTC 1 cut(s) 1105
SaqAI TTAA 6 cut(s) 179, 789, 863, 894, 989, 1157
Sau3AI GATC 6 cut(s) 58, 350, 469, 664, 858, 1704
Sau96I GGNCC 1 cut(s) 1765
SchI GAGTC 2 cut(s) 211, 653
ScrFI CCNGG 3 cut(s) 1134, 1442, 1493
SduI GDGCHC 2 cut(s) 842, 1105
SexAI ACCWGGT 1 cut(s) 1491
SfaNI GCATC 3 cut(s) 100, 565, 725
SfcI CTRYAG 5 cut(s) 273, 609, 711, 826, 1233
SinI GGWCC 1 cut(s) 1765
SmiMI CAYNNNNRTG 2 cut(s) 737, 1757
SmlI CTYRAG 2 cut(s) 851, 1240
SmoI CTYRAG 2 cut(s) 851, 1240
SpeI ACTAGT 2 cut(s) 1210, 1672
SphI GCATGC 1 cut(s) 1411
Sse9I AATT 8 cut(s) 45, 163, 181, 366, 1042, 1167, 1388, 1621
SsiI CCGC 5 cut(s) 127, 326, 936, 1542, 1830
SspI AATATT 1 cut(s) 1744
SspMI CTAG 7 cut(s) 122, 834, 1098, 1211, 1253, 1673, 1812
SstI GAGCTC 1 cut(s) 1105
StyD4I CCNGG 3 cut(s) 1132, 1440, 1491
StyI CCWWGG 1 cut(s) 1053
TaaI ACNGT 4 cut(s) 516, 1023, 1369, 1960
TaiI ACGT 3 cut(s) 175, 915, 981
TaqI TCGA 3 cut(s) 677, 1364, 1643
TasI AATT 8 cut(s) 45, 163, 181, 366, 1042, 1167, 1388, 1621
TatI WGTACW 1 cut(s) 1630
TauI GCSGC 2 cut(s) 130, 1833
TfiI GAWTC 5 cut(s) 85, 625, 674, 1304, 1658
Tru1I TTAA 6 cut(s) 179, 789, 863, 894, 989, 1157
Tru9I TTAA 6 cut(s) 179, 789, 863, 894, 989, 1157
TscAI CASTG 4 cut(s) 519, 618, 715, 835
TseFI GTSAC 3 cut(s) 64, 656, 1750
Tsp45I GTSAC 3 cut(s) 64, 656, 1750
TspDTI ATGAA 8 cut(s) 57, 699, 810, 908, 1011, 1103, 1304, 1960
TspGWI ACGGA 2 cut(s) 586, 1651
TspRI CASTG 4 cut(s) 519, 618, 715, 835
Van91I CCANNNNNTGG 1 cut(s) 1059
VneI GTGCAC 1 cut(s) 838
VpaK11BI GGWCC 1 cut(s) 1765
XapI RAATTY 3 cut(s) 45, 1167, 1621
XceI RCATGY 1 cut(s) 1411
XcmI CCANNNNNNNNNTGG 1 cut(s) 1528
XmiI GTMKAC 1 cut(s) 1732
XspI CTAG 7 cut(s) 122, 834, 1098, 1211, 1253, 1673, 1812
ZraI GACGTC 1 cut(s) 979
Zsp2I ATGCAT 1 cut(s) 1409
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.