Prupe.3G154700_v2.0.a1

ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
OG0000494
Physical Location & Seq
Forward (+)
17110774 .. 17115921
5148 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G154700.1

Sequence Viewer

Length: 1299 bp
ATGTTTGAAGAAACAGAACTACCATCACAGGAAATGGAAGCACATCATCGAACACAGGACTTTGAAGAAACAGATGGTGATGCTGATAACTTGCGCTTGTACCAGCAGCTGTACAGCTATGCTACTCGAGGCAACACAAATAGATTTAACGACACTATTGCAAATGAGCTTCATGATCCCAATGCTCGAGTTCAGCTTCTGTCTCGACGAAGCCCCCAGAATAACACATTTGTTCACATAGCTGTGAGCTCCGGCCATGTCGAACTAGCAACCAAGATCTTGCAAGAACACAAGCCCCTTTTGTTAGAGAAAAACTTTGAAGGCGACACCGCGCTCCACATTGCGGCCAAAGCCGAAGATATAGATACGACAACAAACACTCTTCTCCGTGAAGCACGAGGAACAACAAACGTTGAAAATAATGCTGATGTATTGACATTGCTGAGGATGAAAAATAATGAGGAAAACACTGCCCTGCACGAAGCCCTGATTCAAGGTCACCAATTAGTAGCCAAGTGTTTGATAGAGGCTGATCCTGCCGTTTCACTTTACACTAATAAGGAACAAAAGTCCCCTTTGTATCTGGCTGCTGAACAAGGGCTTGTTGAGATAGTGAAGCTAATAAAAGAAAAAGCAGTTGAGAAGGACACAGAAATTCAAGGCAAGTCTCCGTTGTTTGCTGCAATTCTAGGCCGCCAGAAAAAAGAAGTCCTAAAGATAATATCAAACATGGAAGCAAATATTTTGAACTCAGAAGATGAGAAAGGGAGGACTCCACTGCATTGTGCAGCATCAATTGGTTATTTAGAAGGGGTTCGCTTCTTAGGCAGACGTCTCAAGGATTCTCATCAAAAGGATCATTATGGTAACTTCCCGATCCATTGTGCATCAAGCAAAGGTCATGTCCACATTGTTAAAGAGCTGCTTCGACATTGTCCCGATTCAATGGAATTGAGGAACTCAAGTGACCAAAATATACTCCATGTTGCAGCAAGATGTGGCGAGGAAAATCTTGTCAAATATTTTCTCAAGAAGGTTGAGTTTCAAATGTTGATAAACCAAAAAGATAACAGAGGAAACACTCCTTTGCACTTGGCAAAGATGTACGATCATCTCAAGGTTGTGCACCTTTTCATTTTGGATAGGAGGATCAACTTCAAGGTCTTGAATGATAGGGGCATGACAGCTCTTGGCATTTCAGAAAGCACTTTGGAAACTAGTGCATCATATCATGAGGTAAGTTTGTGCTATATCTACTTTTATCATATTATTGATGATCATGACTTTTGGCTATCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank Ank_2 Ank_3 Ank_4 Ank_5 PGG

Protein Analysis

433

Amino Acids

49.23

Weight (kDa)

6.03

Isoelectric Point (pI)

40.72

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000494)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G03670 AT4G03440 AT4G03440 AT4G03440 AT4G03450 AT4G03450 AT4G03460 AT4G03460 AT4G03470 AT4G03480 AT4G03480 AT4G03490 AT4G03490 AT4G03490 AT4G03490 AT4G03490 AT4G03500 AT4G03500 AT4G03500 AT4G03505 AT4G05040 AT4G05040 AT4G05040 AT4G05040 AT4G05040 AT4G05040 AT4G05040 AT4G14390 AT4G14390 AT4G14390 AT4G14390 AT4G14400 AT4G14400 AT4G14400
fragaria_vesca FvH4_3g05910 FvH4_3g23320
malus_domestica MD03G1094000.v1.1 MD03G1094200.v1.1 MD03G1094600.v1.1 MD12G1218700.v1.1
prunus_persica Prupe.3G135100_v2.0.a1 Prupe.3G135200_v2.0.a1 Prupe.3G135700_v2.0.a1 Prupe.3G135700_v2.0.a1 Prupe.3G142400_v2.0.a1 Prupe.3G153800_v2.0.a1 Prupe.3G153800_v2.0.a1 Prupe.3G153800_v2.0.a1 Prupe.3G153800_v2.0.a1 Prupe.3G154000_v2.0.a1 Prupe.3G154200_v2.0.a1 Prupe.3G154200_v2.0.a1 Prupe.3G154600_v2.0.a1 Prupe.3G154700_v2.0.a1 Prupe.3G155200_v2.0.a1 Prupe.3G155300_v2.0.a1 Prupe.8G110300_v2.0.a1
pyrus_communis pycom03g07280 pycom03g07580 pycom03g07660 pycom03g07700 pycom03g07710
rosa_chinensis RchiOBHm_Chr3g0461161 RchiOBHm_Chr5g0041111
rosa_laevigata RLG00000023472 RLG00000023475 RLG00000034025
rosa_multiflora Rmu_co8126040.1_g000001 Rmu_co8268563.1_g000001 Rmu_sc0000964.1_g000014 Rmu_sc0028923.1_g000001 Rmu_sc0042194.1_g000001
rosa_roxburghii Rroxscaffold_1G00039610 Rroxscaffold_6G00401360
rosa_rugosa Rorug03G0048600 Rorug03G0048700 Rorug05G0190000
rosa_samantha Rh3AG105900 Rh3BG110200 Rh3BG268400 Rh3CG111800 Rh3DG111900 Rh5AG275800 Rh5BG280500 Rh5CG312600 Rh5DG288800
rosa_wichuraiana Rw3G009080 Rw5G025920

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 835
AccII CGCG 1 cut(s) 332
AciI CCGC 3 cut(s) 330, 344, 694
AclI AACGTT 1 cut(s) 411
AclWI GGATC 5 cut(s) 170, 527, 864, 871, 1157
AcoI YGGCCR 2 cut(s) 253, 345
AcsI RAATTY 1 cut(s) 654
AcyI GRCGYC 1 cut(s) 832
AfaI GTAC 3 cut(s) 101, 113, 1106
AfiI CCNNNNNNNGG 1 cut(s) 343
AhlI ACTAGT 1 cut(s) 1217
AluBI AGCT 9 cut(s) 109, 117, 169, 196, 242, 249, 619, 922, 1187
AluI AGCT 9 cut(s) 109, 117, 169, 196, 242, 249, 619, 922, 1187
Alw21I GWGCWC 2 cut(s) 251, 1128
Alw26I GTCTC 3 cut(s) 207, 672, 839
Alw44I GTGCAC 1 cut(s) 1124
AlwI GGATC 5 cut(s) 170, 527, 864, 871, 1157
AlwNI CAGNNNCTG 2 cut(s) 109, 199
Ama87I CYCGRG 2 cut(s) 126, 186
AoxI GGCC 3 cut(s) 253, 345, 691
ApaLI GTGCAC 1 cut(s) 1124
ApeKI GCWGC 6 cut(s) 106, 587, 680, 788, 922, 989
ApoI RAATTY 1 cut(s) 654
ArsI GACNNNNNNTTYG 2 cut(s) 888, 920
Asp700I GAANNNNTTC 1 cut(s) 813
AspLEI GCGC 2 cut(s) 96, 334
AsuHPI GGTGA 2 cut(s) 89, 491
AvaI CYCGRG 2 cut(s) 126, 186
BaeGI GKGCMC 1 cut(s) 1128
BanII GRGCYC 1 cut(s) 251
BauI CACGAG 1 cut(s) 396
Bbv12I GWGCWC 2 cut(s) 251, 1128
BbvCI CCTCAGC 1 cut(s) 443
BbvI GCAGC 6 cut(s) 118, 574, 667, 800, 909, 1001
BccI CCATC 2 cut(s) 31, 68
BceAI ACGGC 1 cut(s) 524
BcgI CGANNNNNNTGC 2 cut(s) 140, 174
BclI TGATCA 1 cut(s) 1276
BcoDI GTCTC 3 cut(s) 207, 672, 839
BcuI ACTAGT 1 cut(s) 1217
BfaI CTAG 3 cut(s) 266, 689, 1218
BglII AGATCT 1 cut(s) 276
BisI GCNGC 8 cut(s) 107, 345, 588, 681, 694, 789, 923, 990
BlsI GCNGC 8 cut(s) 108, 346, 589, 682, 695, 790, 924, 991
BmeT110I CYCGRG 2 cut(s) 126, 186
BmsI GCATC 4 cut(s) 70, 800, 896, 1232
Bpu10I CCTNAGC 1 cut(s) 443
BpuEI CTTGAG 4 cut(s) 821, 946, 1013, 1100
BsaBI GATNNNNATC 1 cut(s) 846
BsaHI GRCGYC 1 cut(s) 832
Bsc4I CCNNNNNNNGG 1 cut(s) 343
Bse3DI GCAATG 2 cut(s) 339, 437
Bse8I GATNNNNATC 1 cut(s) 846
BseGI GGATG 1 cut(s) 453
BseJI GATNNNNATC 1 cut(s) 846
BseLI CCNNNNNNNGG 1 cut(s) 343
BseMI GCAATG 2 cut(s) 339, 437
BseMII CTCAG 2 cut(s) 434, 765
BseSI GKGCMC 1 cut(s) 1128
BseXI GCAGC 6 cut(s) 118, 574, 667, 800, 909, 1001
BsgI GTGCAG 2 cut(s) 461, 807
Bsh1236I CGCG 1 cut(s) 332
BshFI GGCC 3 cut(s) 255, 347, 693
BsiHKAI GWGCWC 2 cut(s) 251, 1128
BsiHKCI CYCGRG 2 cut(s) 126, 186
BsiSI CCGG 1 cut(s) 252
BslFI GGGAC 2 cut(s) 556, 921
BslI CCNNNNNNNGG 1 cut(s) 343
BsmAI GTCTC 3 cut(s) 207, 672, 839
BsmBI CGTCTC 1 cut(s) 839
BsmFI GGGAC 2 cut(s) 556, 921
BsnI GGCC 3 cut(s) 255, 347, 693
BsoBI CYCGRG 2 cut(s) 126, 186
Bsp1286I GDGCHC 2 cut(s) 251, 1128
Bsp1407I TGTACA 1 cut(s) 111
Bsp143I GATC 8 cut(s) 175, 276, 532, 856, 876, 1108, 1149, 1276
BspACI CCGC 3 cut(s) 330, 344, 694
BspANI GGCC 3 cut(s) 255, 347, 693
BspCNI CTCAG 2 cut(s) 435, 764
BspFNI CGCG 1 cut(s) 332
BspHI TCATGA 3 cut(s) 172, 1231, 1279
BspPI GGATC 5 cut(s) 170, 527, 864, 871, 1157
BsrDI GCAATG 2 cut(s) 339, 437
BsrGI TGTACA 1 cut(s) 111
BssMI GATC 8 cut(s) 175, 276, 532, 856, 876, 1108, 1149, 1276
BssNI GRCGYC 1 cut(s) 832
BssSI CACGAG 1 cut(s) 396
Bst2BI CACGAG 1 cut(s) 396
Bst6I CTCTTC 1 cut(s) 387
BstACI GRCGYC 1 cut(s) 832
BstAUI TGTACA 1 cut(s) 111
BstDEI CTNAG 3 cut(s) 443, 751, 823
BstEII GGTNACC 1 cut(s) 497
BstF5I GGATG 1 cut(s) 453
BstFNI CGCG 1 cut(s) 332
BstHHI GCGC 2 cut(s) 96, 334
BstKTI GATC 8 cut(s) 178, 279, 535, 859, 879, 1111, 1152, 1279
BstMAI GTCTC 3 cut(s) 207, 672, 839
BstMBI GATC 8 cut(s) 175, 276, 532, 856, 876, 1108, 1149, 1276
BstMWI GCNNNNNNNGC 3 cut(s) 350, 536, 825
BstPI GGTNACC 1 cut(s) 497
BstSLI GKGCMC 1 cut(s) 1128
BstUI CGCG 1 cut(s) 332
BstV1I GCAGC 6 cut(s) 118, 574, 667, 800, 909, 1001
BstX2I RGATCY 1 cut(s) 276
BstYI RGATCY 1 cut(s) 276
BsuRI GGCC 3 cut(s) 255, 347, 693
BtsCI GGATG 1 cut(s) 453
BtsI GCAGTG 2 cut(s) 468, 776
BtsIMutI CAGTG 2 cut(s) 468, 776
CaiI CAGNNNCTG 2 cut(s) 109, 199
CciI TCATGA 3 cut(s) 172, 1231, 1279
CfoI GCGC 2 cut(s) 96, 334
Csp6I GTAC 3 cut(s) 100, 112, 1105
CviAII CATG 8 cut(s) 173, 257, 730, 902, 983, 1180, 1232, 1280
CviQI GTAC 3 cut(s) 100, 112, 1105
DdeI CTNAG 3 cut(s) 443, 751, 823
DpnI GATC 8 cut(s) 177, 278, 534, 858, 878, 1110, 1151, 1278
DpnII GATC 8 cut(s) 175, 276, 532, 856, 876, 1108, 1149, 1276
EaeI YGGCCR 2 cut(s) 253, 345
Eam1104I CTCTTC 1 cut(s) 387
EarI CTCTTC 1 cut(s) 387
Ecl136II GAGCTC 1 cut(s) 249
Eco24I GRGCYC 1 cut(s) 251
Eco53kI GAGCTC 1 cut(s) 249
Eco88I CYCGRG 2 cut(s) 126, 186
Eco91I GGTNACC 1 cut(s) 497
EcoICRI GAGCTC 1 cut(s) 249
EcoO65I GGTNACC 1 cut(s) 497
EcoT38I GRGCYC 1 cut(s) 251
Esp3I CGTCTC 1 cut(s) 839
FaeI CATG 8 cut(s) 176, 260, 733, 905, 986, 1183, 1235, 1283
FalI AAGNNNNNCTT 2 cut(s) 909, 941
FaqI GGGAC 2 cut(s) 556, 921
FatI CATG 8 cut(s) 172, 256, 729, 901, 982, 1179, 1231, 1279
FbaI TGATCA 1 cut(s) 1276
Fnu4HI GCNGC 8 cut(s) 107, 345, 588, 681, 694, 789, 923, 990
FokI GGATG 1 cut(s) 460
FriOI GRGCYC 1 cut(s) 251
Fsp4HI GCNGC 8 cut(s) 107, 345, 588, 681, 694, 789, 923, 990
FspBI CTAG 3 cut(s) 266, 689, 1218
GlaI GCGC 2 cut(s) 95, 333
GluI GCNGC 8 cut(s) 107, 345, 588, 681, 694, 789, 923, 990
HaeIII GGCC 3 cut(s) 255, 347, 693
HapII CCGG 1 cut(s) 252
HhaI GCGC 2 cut(s) 96, 334
Hin1I GRCGYC 1 cut(s) 832
Hin1II CATG 8 cut(s) 176, 260, 733, 905, 986, 1183, 1235, 1283
Hin6I GCGC 2 cut(s) 94, 332
HinP1I GCGC 2 cut(s) 94, 332
HinfI GANTC 4 cut(s) 490, 772, 842, 941
HpaII CCGG 1 cut(s) 252
HphI GGTGA 2 cut(s) 89, 491
Hpy166II GTNNAC 3 cut(s) 235, 907, 1126
Hpy188I TCNGA 2 cut(s) 754, 1201
Hpy188III TCNNGA 8 cut(s) 173, 204, 874, 938, 1030, 1165, 1232, 1280
Hpy8I GTNNAC 3 cut(s) 235, 907, 1126
Hpy99I CGWCG 1 cut(s) 210
HpyAV CCTTC 4 cut(s) 314, 637, 803, 1027
HpyCH4IV ACGT 2 cut(s) 411, 832
HpyF10VI GCNNNNNNNGC 3 cut(s) 350, 536, 825
HpyF3I CTNAG 3 cut(s) 443, 751, 823
HpySE526I ACGT 2 cut(s) 411, 832
Hsp92I GRCGYC 1 cut(s) 832
Hsp92II CATG 8 cut(s) 176, 260, 733, 905, 986, 1183, 1235, 1283
HspAI GCGC 2 cut(s) 94, 332
Ksp22I TGATCA 1 cut(s) 1276
Kzo9I GATC 8 cut(s) 175, 276, 532, 856, 876, 1108, 1149, 1276
LmnI GCTCC 2 cut(s) 254, 339
Lsp1109I GCAGC 6 cut(s) 118, 574, 667, 800, 909, 1001
LweI GCATC 4 cut(s) 70, 800, 896, 1232
MaeI CTAG 3 cut(s) 266, 689, 1218
MaeII ACGT 2 cut(s) 411, 832
MaeIII GTNAC 3 cut(s) 497, 866, 965
MalI GATC 8 cut(s) 177, 278, 534, 858, 878, 1110, 1151, 1278
MboI GATC 8 cut(s) 175, 276, 532, 856, 876, 1108, 1149, 1276
MboII GAAGA 5 cut(s) 20, 77, 368, 374, 767
MfeI CAATTG 1 cut(s) 795
MflI RGATCY 1 cut(s) 276
MhlI GDGCHC 2 cut(s) 251, 1128
MluCI AATT 5 cut(s) 503, 654, 684, 795, 950
MlyI GAGTC 1 cut(s) 766
MroXI GAANNNNTTC 1 cut(s) 813
MseI TTAA 2 cut(s) 147, 915
MslI CAYNNNNRTG 1 cut(s) 242
MspA1I CMGCKG 1 cut(s) 109
MspI CCGG 1 cut(s) 252
MunI CAATTG 1 cut(s) 795
MvnI CGCG 1 cut(s) 332
MwoI GCNNNNNNNGC 3 cut(s) 350, 536, 825
NdeII GATC 8 cut(s) 175, 276, 532, 856, 876, 1108, 1149, 1276
NlaIII CATG 8 cut(s) 176, 260, 733, 905, 986, 1183, 1235, 1283
NmuCI GTSAC 2 cut(s) 497, 965
PaeR7I CTCGAG 2 cut(s) 126, 186
PagI TCATGA 3 cut(s) 172, 1231, 1279
PdmI GAANNNNTTC 1 cut(s) 813
PfeI GAWTC 3 cut(s) 490, 842, 941
PflFI GACNNNGTC 1 cut(s) 933
PkrI GCNGC 8 cut(s) 108, 346, 589, 682, 695, 790, 924, 991
PleI GAGTC 1 cut(s) 766
PpsI GAGTC 1 cut(s) 766
Psp124BI GAGCTC 1 cut(s) 251
Psp1406I AACGTT 1 cut(s) 411
PspEI GGTNACC 1 cut(s) 497
PspXI VCTCGAGB 2 cut(s) 126, 186
PstNI CAGNNNCTG 2 cut(s) 109, 199
PsuI RGATCY 1 cut(s) 276
PsyI GACNNNGTC 1 cut(s) 933
PvuII CAGCTG 1 cut(s) 109
RsaI GTAC 3 cut(s) 101, 113, 1106
RsaNI GTAC 3 cut(s) 100, 112, 1105
RseI CAYNNNNRTG 1 cut(s) 242
SacI GAGCTC 1 cut(s) 251
SaqAI TTAA 2 cut(s) 147, 915
SatI GCNGC 8 cut(s) 107, 345, 588, 681, 694, 789, 923, 990
Sau3AI GATC 8 cut(s) 175, 276, 532, 856, 876, 1108, 1149, 1276
SchI GAGTC 1 cut(s) 766
SduI GDGCHC 2 cut(s) 251, 1128
SfaNI GCATC 4 cut(s) 70, 800, 896, 1232
Sfr274I CTCGAG 2 cut(s) 126, 186
SlaI CTCGAG 2 cut(s) 126, 186
SmiMI CAYNNNNRTG 1 cut(s) 242
SmlI CTYRAG 6 cut(s) 126, 186, 836, 961, 1028, 1115
SmoI CTYRAG 6 cut(s) 126, 186, 836, 961, 1028, 1115
SpeI ACTAGT 1 cut(s) 1217
Sse9I AATT 5 cut(s) 503, 654, 684, 795, 950
SsiI CCGC 3 cut(s) 330, 344, 694
SspI AATATT 2 cut(s) 742, 1022
SspMI CTAG 3 cut(s) 266, 689, 1218
SstI GAGCTC 1 cut(s) 251
TaiI ACGT 2 cut(s) 414, 835
TaqI TCGA 6 cut(s) 49, 127, 187, 205, 261, 928
TasI AATT 5 cut(s) 503, 654, 684, 795, 950
TatI WGTACW 1 cut(s) 111
TauI GCSGC 2 cut(s) 347, 696
TfiI GAWTC 3 cut(s) 490, 842, 941
Tru1I TTAA 2 cut(s) 147, 915
Tru9I TTAA 2 cut(s) 147, 915
TscAI CASTG 2 cut(s) 475, 783
TseFI GTSAC 2 cut(s) 497, 965
TseI GCWGC 6 cut(s) 106, 587, 680, 788, 922, 989
Tsp45I GTSAC 2 cut(s) 497, 965
TspDTI ATGAA 3 cut(s) 161, 464, 1123
TspGWI ACGGA 2 cut(s) 377, 660
TspRI CASTG 2 cut(s) 475, 783
Tth111I GACNNNGTC 1 cut(s) 933
VneI GTGCAC 1 cut(s) 1124
XapI RAATTY 1 cut(s) 654
XhoI CTCGAG 2 cut(s) 126, 186
XmnI GAANNNNTTC 1 cut(s) 813
XspI CTAG 3 cut(s) 266, 689, 1218
ZraI GACGTC 1 cut(s) 833
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.