AT4G14400

ankyrin repeat family protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
OG0000494
Physical Location & Seq
Forward (+)
8294165 .. 8299195
5031 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G14400.1

Sequence Viewer

Length: 2013 bp
ATGGACAGTTCTGGAGCAGATCTAGATAGAATTGAGGCACAAAGGTCAATGTTAGTTTCTCATGATCAACGGAAAGATTTCTCTCACAGCGGAGGAGTTGGCACCACGTCACCTACGGGCGACACCGAACCTGTGCCAAAGTTCCGTACTAACCTTAAATTGTCGGATCTTTTCGCTCTCCCTGGTGAAGATGTCGAGATGACTCCGGAGATTTTTGGTGGAATGAGTAATGGGGAAAAAGAATGTCTGGAGAAGTTGAGAAGCAATGGAACGCCAATGGAACGTGTCAAGAGCAATACAGGAGATTCAATTCTTCATATTGCTGCTAAATGGGGTCATCTGGAACTAGTGAAGGAGATTATCTTTGAATGTCCATGCCTTCTATTCGAGCAAAACTCAAGCCGTCAGACACCGCTACATGTGGCTACTCATGGCGGTCATACCAAAGTTGTTGAGGCTCTTGTTGCATCGGTAACATCTGCTTTAGCTAGTCTGAGTACTGAAGAGAGTGAGGGACTGAATCCACATGTTCTTAAGGACGAAGATGGAAATACTGCTCTGTACTACGCCATTGAAGGACGCTATTTGGAGATGGCTACCTGTCTGGTGAACGCGGACAAGGATGCTCCTTTTCTTGGAAATAACAAGGGAATATCTTCCTTGTACGAAGCCGTAGACGCTGGAAATAAATTTGAAGACCTTGTGAAAGCAATTTTGAAAACCACAGACGACAACGTGGACCGTGAAGTGAGGAAGTTTAACTTAGATTCGAAATTACAAGGGAACAAACATCTTGCACATGTTGCTTTGAAGGCCAAAAGTATAGGTGTCCTTGATGTTATTCTTGATGAATATCCAAGTCTTATGGACGAGCAAGATGAAGATGGTAGGACTTGTCTTTCATACGGAGCATCCATTGGGTATTATAAAGGACTATGCAACATCTTAAACCGATCAACAAAGGGTGTTTATGTCTGCGACCAAGATGGTTCTTTTCCAATTCATTCGGCTGCAAAAAACGAACATTACGAAATTATTAAAGAGTTTATAAAACGTTGTCCAGCTTCAAAATACCTTCTTAACAGACTTGGTCAGAACATTCTCCACGTGGCGGCAAAAAATGAGGCCTCTCTTACTGCATATATGTTGATGCATGATAAAGATACGAAACATCTGGGTGTTGGGCAAGATGTGGACGGGAATACACCTTTGCACCTTGCCGTCATGAACTGGGACTTTGACTCCATTACTTGTCTTGCTAGCCGTAACCACGAGATACTGAAATTACGAAACAAAAGCGGCTTAAGAGCTAGGGATATTGCCGAGTCAGAGGTGAAACCCAACTACATCTTTCATGAGAGGTGGACACTGGCGCTCTTATTATACGCTATTCACTCAAGTGGTTTCGAATCTGTTAAGTCATTAACAATACAGTCAGTGCCACTAGACCCTAAGAAAAACAGACATTACGTCAACGCTCTTCTCGTGGTAGCGGCTCTTGTAGCCACAGTGACGTTTGCTGCAGGCTTTACAATACCAGGTGGTTATATCAGCGATAGCAAAAAACCAAACTTGGGCAGGGCAACTTTGGCCACTAACCCAACTCTCTTCATTTTTCTGCTTTTTGACATCTTGGCAATGCAAAGTTCTGTTGCAACAATATGTACTCTTATTTGGGCGCAGTTGGGTGATCTAGCACTCATCCTCAAATCCTTACATGTGGCCTTGCCCTTACTACTTTTTTCATTACTATGCATGCCCGTAGCATTCCTTTTTGGCGTGATCACTGCAATTGCCCATGTGAAATGGCTTTTAGTCACCATTAGCATTATATCTGGTGGATTCTTCCTTTTCGCAATCTTTATCCTTGGCCCTCACGTCATGCTACAGCGCTCACACCTTCCGCCCAGTTCTGGTATATTTCTCAAGACTTTTATGCTGACTATAGACATATCTGAGTTGTTTGTGATTTTGATCAAAGCTTGTTTTGGTTGTGTGGCGTGTTCCGAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001101 GO:0002376 GO:0002831 GO:0002833 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0005886 GO:0005887 GO:0006464 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0008152 GO:0008219 GO:0009266 GO:0009314 GO:0009409 GO:0009416 GO:0009605 GO:0009607 GO:0009615 GO:0009617 GO:0009628 GO:0009719 GO:0009725 GO:0009751 GO:0009814 GO:0009816 GO:0009966 GO:0009987 GO:0010033 GO:0010646 GO:0012505 GO:0014070 GO:0016020 GO:0016021 GO:0016567 GO:0019538 GO:0023051 GO:0030176 GO:0031224 GO:0031226 GO:0031227 GO:0031347 GO:0031349 GO:0031984 GO:0032101 GO:0032103 GO:0032446 GO:0032870 GO:0035690 GO:0036211 GO:0042175 GO:0042221 GO:0042493 GO:0042742 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043900 GO:0043902 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044459 GO:0044464 GO:0045087 GO:0046677 GO:0048518 GO:0048583 GO:0048584 GO:0050789 GO:0050794 GO:0050826 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0065007 GO:0070647 GO:0070887 GO:0071229 GO:0071236 GO:0071310 GO:0071407 GO:0071446 GO:0071495 GO:0071704 GO:0071944 GO:0080134 GO:0098542 GO:0098827 GO:1900150 GO:1900424 GO:1900426 GO:1901564 GO:1901700 GO:1901701 GO:1902288 GO:1902290 GO:2000031 GO:2001023 GO:2001038
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank Ank_2 Ank_4 Ank_5 PGG

Protein Analysis

670

Amino Acids

73.53

Weight (kDa)

6.06

Isoelectric Point (pI)

43.6

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 77 - 156 1.7e-10 Ankyrin repeats (3 copies)
Ank_2 PF12796 312 - 387 7e-07 Ankyrin repeats (3 copies)
Ank_2 PF12796 334 - 424 4.9e-10 Ankyrin repeats (3 copies)
PGG PF13962 486 - 595 3.7e-27 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000494)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G03670 AT4G03440 AT4G03440 AT4G03440 AT4G03450 AT4G03450 AT4G03460 AT4G03460 AT4G03470 AT4G03480 AT4G03480 AT4G03490 AT4G03490 AT4G03490 AT4G03490 AT4G03490 AT4G03500 AT4G03500 AT4G03500 AT4G03505 AT4G05040 AT4G05040 AT4G05040 AT4G05040 AT4G05040 AT4G05040 AT4G05040 AT4G14390 AT4G14390 AT4G14390 AT4G14390 AT4G14400 AT4G14400 AT4G14400
fragaria_vesca FvH4_3g05910 FvH4_3g23320
malus_domestica MD03G1094000.v1.1 MD03G1094200.v1.1 MD03G1094600.v1.1 MD12G1218700.v1.1
prunus_persica Prupe.3G135100_v2.0.a1 Prupe.3G135200_v2.0.a1 Prupe.3G135700_v2.0.a1 Prupe.3G135700_v2.0.a1 Prupe.3G142400_v2.0.a1 Prupe.3G153800_v2.0.a1 Prupe.3G153800_v2.0.a1 Prupe.3G153800_v2.0.a1 Prupe.3G153800_v2.0.a1 Prupe.3G154000_v2.0.a1 Prupe.3G154200_v2.0.a1 Prupe.3G154200_v2.0.a1 Prupe.3G154600_v2.0.a1 Prupe.3G154700_v2.0.a1 Prupe.3G155200_v2.0.a1 Prupe.3G155300_v2.0.a1 Prupe.8G110300_v2.0.a1
pyrus_communis pycom03g07280 pycom03g07580 pycom03g07660 pycom03g07700 pycom03g07710
rosa_chinensis RchiOBHm_Chr3g0461161 RchiOBHm_Chr5g0041111
rosa_laevigata RLG00000023472 RLG00000023475 RLG00000034025
rosa_multiflora Rmu_co8126040.1_g000001 Rmu_co8268563.1_g000001 Rmu_sc0000964.1_g000014 Rmu_sc0028923.1_g000001 Rmu_sc0042194.1_g000001
rosa_roxburghii Rroxscaffold_1G00039610 Rroxscaffold_6G00401360
rosa_rugosa Rorug03G0048600 Rorug03G0048700 Rorug05G0190000
rosa_samantha Rh3AG105900 Rh3BG110200 Rh3BG268400 Rh3CG111800 Rh3DG111900 Rh5AG275800 Rh5BG280500 Rh5CG312600 Rh5DG288800
rosa_wichuraiana Rw3G009080 Rw5G025920

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 927, 1049
AccB1I GGYRCC 1 cut(s) 101
AccI GTMKAC 1 cut(s) 675
AccII CGCG 1 cut(s) 614
AccIII TCCGGA 1 cut(s) 205
AciI CCGC 8 cut(s) 90, 413, 435, 614, 1112, 1299, 1493, 1904
AclI AACGTT 1 cut(s) 1054
AclWI GGATC 1 cut(s) 174
AcoI YGGCCR 1 cut(s) 1590
AcsI RAATTY 1 cut(s) 689
AcuI CTGAAG 1 cut(s) 522
AcvI CACGTG 1 cut(s) 1108
AfaI GTAC 5 cut(s) 148, 499, 563, 665, 1666
AfeI AGCGCT 1 cut(s) 1892
AfiI CCNNNNNNNGG 4 cut(s) 635, 1111, 1574, 1913
AflII CTTAAG 2 cut(s) 533, 1303
AflIII ACRYGT 5 cut(s) 283, 418, 526, 799, 1717
AgsI TTSAA 7 cut(s) 309, 368, 575, 695, 718, 811, 1068
AhdI GACNNNNNGTC 1 cut(s) 1469
AhlI ACTAGT 1 cut(s) 346
AjiI CACGTC 2 cut(s) 108, 1879
AjnI CCWGG 2 cut(s) 181, 1537
AleI CACNNNNGTG 1 cut(s) 1398
AluBI AGCT 4 cut(s) 488, 1064, 1310, 1982
AluI AGCT 4 cut(s) 488, 1064, 1310, 1982
AlwI GGATC 1 cut(s) 174
Aor13HI TCCGGA 1 cut(s) 205
Aor51HI AGCGCT 1 cut(s) 1892
AoxI GGCC 5 cut(s) 813, 1125, 1590, 1722, 1870
ApeKI GCWGC 3 cut(s) 323, 1010, 1520
ApoI RAATTY 1 cut(s) 689
Asp700I GAANNNNTTC 2 cut(s) 77, 655
AspLEI GCGC 3 cut(s) 1375, 1681, 1893
AspS9I GGNCC 2 cut(s) 739, 1871
AsuHPI GGTGA 6 cut(s) 102, 197, 619, 1345, 1700, 1810
AsuII TTCGAA 2 cut(s) 770, 1407
AsuNHI GCTAGC 1 cut(s) 1259
AvaII GGWCC 1 cut(s) 739
BalI TGGCCA 1 cut(s) 1592
BanI GGYRCC 1 cut(s) 101
BauI CACGAG 2 cut(s) 1271, 1484
BbrPI CACGTG 1 cut(s) 1108
BbsI GAAGAC 1 cut(s) 702
BbvI GCAGC 3 cut(s) 310, 997, 1507
BccI CCATC 4 cut(s) 539, 586, 878, 980
BceAI ACGGC 4 cut(s) 387, 656, 1205, 1248
BciT130I CCWGG 2 cut(s) 183, 1539
BclI TGATCA 3 cut(s) 64, 1782, 1974
BcuI ACTAGT 1 cut(s) 346
BfaI CTAG 7 cut(s) 23, 347, 489, 1260, 1311, 1445, 1694
BfmI CTRYAG 3 cut(s) 1521, 1886, 1944
BfoI RGCGCY 2 cut(s) 1376, 1894
BfrI CTTAAG 2 cut(s) 533, 1303
BglII AGATCT 1 cut(s) 19
BisI GCNGC 6 cut(s) 324, 1011, 1113, 1300, 1494, 1521
BlsI GCNGC 6 cut(s) 325, 1012, 1114, 1301, 1495, 1522
BmcAI AGTACT 1 cut(s) 499
Bme1390I CCNGG 2 cut(s) 183, 1539
Bme18I GGWCC 1 cut(s) 739
BmeRI GACNNNNNGTC 1 cut(s) 1469
BmgBI CACGTC 2 cut(s) 108, 1879
BmgT120I GGNCC 2 cut(s) 739, 1871
BmiI GGNNCC 1 cut(s) 103
BmrFI CCNGG 2 cut(s) 183, 1539
BmrI ACTGGG 2 cut(s) 1240, 1902
BmsI GCATC 4 cut(s) 476, 613, 920, 1140
BmtI GCTAGC 1 cut(s) 1263
BmuI ACTGGG 2 cut(s) 1240, 1902
BpiI GAAGAC 1 cut(s) 702
BplI GAGNNNNNCTC 2 cut(s) 380, 412
BpmI CTGGAG 2 cut(s) 33, 269
Bpu14I TTCGAA 2 cut(s) 770, 1407
BpuEI CTTGAG 3 cut(s) 382, 1381, 1910
BsaAI YACGTR 1 cut(s) 1108
BsaBI GATNNNNATC 2 cut(s) 852, 1973
BsaJI CCNNGG 2 cut(s) 181, 1867
BsaWI WCCGGW 1 cut(s) 205
BsaXI ACNNNNNCTCC 2 cut(s) 1226, 1256
Bsc4I CCNNNNNNNGG 4 cut(s) 635, 1111, 1574, 1913
Bse1I ACTGG 3 cut(s) 1235, 1374, 1908
Bse3DI GCAATG 2 cut(s) 271, 1644
Bse8I GATNNNNATC 2 cut(s) 852, 1973
BseAI TCCGGA 1 cut(s) 205
BseBI CCWGG 2 cut(s) 183, 1539
BseDI CCNNGG 2 cut(s) 181, 1867
BseGI GGATG 3 cut(s) 628, 911, 1701
BseJI GATNNNNATC 2 cut(s) 852, 1973
BseLI CCNNNNNNNGG 4 cut(s) 635, 1111, 1574, 1913
BseMI GCAATG 2 cut(s) 271, 1644
BseMII CTCAG 2 cut(s) 485, 1947
BseNI ACTGG 3 cut(s) 1235, 1374, 1908
BseRI GAGGAG 1 cut(s) 108
BseXI GCAGC 3 cut(s) 310, 997, 1507
Bsh1236I CGCG 1 cut(s) 614
BshFI GGCC 5 cut(s) 815, 1127, 1592, 1724, 1872
BshNI GGYRCC 1 cut(s) 101
BsiSI CCGG 1 cut(s) 206
BslFI GGGAC 2 cut(s) 528, 1247
BslI CCNNNNNNNGG 4 cut(s) 635, 1111, 1574, 1913
BsmFI GGGAC 2 cut(s) 528, 1247
BsmI GAATGC 1 cut(s) 1766
BsnI GGCC 5 cut(s) 815, 1127, 1592, 1724, 1872
Bsp119I TTCGAA 2 cut(s) 770, 1407
Bsp13I TCCGGA 1 cut(s) 205
Bsp143I GATC 7 cut(s) 19, 64, 166, 953, 1690, 1782, 1974
BspACI CCGC 8 cut(s) 90, 413, 435, 614, 1112, 1299, 1493, 1904
BspANI GGCC 5 cut(s) 815, 1127, 1592, 1724, 1872
BspCNI CTCAG 2 cut(s) 486, 1948
BspEI TCCGGA 1 cut(s) 205
BspFNI CGCG 1 cut(s) 614
BspHI TCATGA 3 cut(s) 61, 1224, 1354
BspLI GGNNCC 1 cut(s) 103
BspMAI CTGCAG 1 cut(s) 1525
BspOI GCTAGC 1 cut(s) 1263
BspPI GGATC 1 cut(s) 174
BspQI GCTCTTC 1 cut(s) 1485
BspT104I TTCGAA 2 cut(s) 770, 1407
BspT107I GGYRCC 1 cut(s) 101
BspTI CTTAAG 2 cut(s) 533, 1303
BsrDI GCAATG 2 cut(s) 271, 1644
BsrI ACTGG 3 cut(s) 1235, 1374, 1908
BssECI CCNNGG 2 cut(s) 181, 1867
BssMI GATC 7 cut(s) 19, 64, 166, 953, 1690, 1782, 1974
BssSI CACGAG 2 cut(s) 1271, 1484
BssT1I CCWWGG 1 cut(s) 1867
Bst2BI CACGAG 2 cut(s) 1271, 1484
Bst2UI CCWGG 2 cut(s) 183, 1539
Bst4CI ACNGT 4 cut(s) 8, 743, 1434, 1510
Bst6I CTCTTC 3 cut(s) 498, 1485, 1613
BstAFI CTTAAG 2 cut(s) 533, 1303
BstAPI GCANNNNNTGC 1 cut(s) 803
BstBAI YACGTR 1 cut(s) 1108
BstBI TTCGAA 2 cut(s) 770, 1407
BstC8I GCNNGC 3 cut(s) 1261, 1525, 1757
BstDEI CTNAG 4 cut(s) 494, 763, 1452, 1956
BstF5I GGATG 3 cut(s) 628, 911, 1701
BstFNI CGCG 1 cut(s) 614
BstH2I RGCGCY 2 cut(s) 1376, 1894
BstHHI GCGC 3 cut(s) 1375, 1681, 1893
BstKTI GATC 7 cut(s) 22, 67, 169, 956, 1693, 1785, 1977
BstMBI GATC 7 cut(s) 19, 64, 166, 953, 1690, 1782, 1974
BstMWI GCNNNNNNNGC 6 cut(s) 464, 677, 803, 812, 1502, 1589
BstNI CCWGG 2 cut(s) 183, 1539
BstNSI RCATGY 5 cut(s) 422, 530, 803, 1721, 1759
BstSCI CCNGG 2 cut(s) 181, 1537
BstSFI CTRYAG 3 cut(s) 1521, 1886, 1944
BstUI CGCG 1 cut(s) 614
BstV1I GCAGC 3 cut(s) 310, 997, 1507
BstV2I GAAGAC 1 cut(s) 702
BstX2I RGATCY 2 cut(s) 19, 166
BstYI RGATCY 2 cut(s) 19, 166
BsuRI GGCC 5 cut(s) 815, 1127, 1592, 1724, 1872
BtrI CACGTC 2 cut(s) 108, 1879
BtsCI GGATG 3 cut(s) 628, 911, 1701
BtsI GCAGTG 1 cut(s) 1785
BtsIMutI CAGTG 4 cut(s) 1367, 1443, 1515, 1785
Cac8I GCNNGC 3 cut(s) 1261, 1525, 1757
CciI TCATGA 3 cut(s) 61, 1224, 1354
CfoI GCGC 3 cut(s) 1375, 1681, 1893
Cfr13I GGNCC 2 cut(s) 739, 1871
CseI GACGC 2 cut(s) 588, 686
CsiI ACCWGGT 1 cut(s) 1537
Csp6I GTAC 5 cut(s) 147, 498, 562, 664, 1665
CviQI GTAC 5 cut(s) 147, 498, 562, 664, 1665
DdeI CTNAG 4 cut(s) 494, 763, 1452, 1956
DpnI GATC 7 cut(s) 21, 66, 168, 955, 1692, 1784, 1976
DpnII GATC 7 cut(s) 19, 64, 166, 953, 1690, 1782, 1974
DriI GACNNNNNGTC 1 cut(s) 1469
EaeI YGGCCR 1 cut(s) 1590
Eam1104I CTCTTC 3 cut(s) 498, 1485, 1613
Eam1105I GACNNNNNGTC 1 cut(s) 1469
EarI CTCTTC 3 cut(s) 498, 1485, 1613
EciI GGCGGA 1 cut(s) 1893
Eco130I CCWWGG 1 cut(s) 1867
Eco147I AGGCCT 1 cut(s) 1127
Eco47I GGWCC 1 cut(s) 739
Eco47III AGCGCT 1 cut(s) 1892
Eco57I CTGAAG 1 cut(s) 522
Eco72I CACGTG 1 cut(s) 1108
EcoRII CCWGG 2 cut(s) 181, 1537
EcoT14I CCWWGG 1 cut(s) 1867
EcoT22I ATGCAT 2 cut(s) 1155, 1757
ErhI CCWWGG 1 cut(s) 1867
FalI AAGNNNNNCTT 2 cut(s) 746, 778
FaqI GGGAC 2 cut(s) 528, 1247
FbaI TGATCA 3 cut(s) 64, 1782, 1974
FblI GTMKAC 1 cut(s) 675
Fnu4HI GCNGC 6 cut(s) 324, 1011, 1113, 1300, 1494, 1521
FokI GGATG 3 cut(s) 635, 898, 1688
Fsp4HI GCNGC 6 cut(s) 324, 1011, 1113, 1300, 1494, 1521
FspBI CTAG 7 cut(s) 23, 347, 489, 1260, 1311, 1445, 1694
GlaI GCGC 3 cut(s) 1374, 1680, 1892
GluI GCNGC 6 cut(s) 324, 1011, 1113, 1300, 1494, 1521
GsuI CTGGAG 2 cut(s) 33, 269
HaeII RGCGCY 2 cut(s) 1376, 1894
HaeIII GGCC 5 cut(s) 815, 1127, 1592, 1724, 1872
HapII CCGG 1 cut(s) 206
HgaI GACGC 2 cut(s) 588, 686
HhaI GCGC 3 cut(s) 1375, 1681, 1893
Hin6I GCGC 3 cut(s) 1373, 1679, 1891
HinP1I GCGC 3 cut(s) 1373, 1679, 1891
HincII GTYRAC 1 cut(s) 1474
HindII GTYRAC 1 cut(s) 1474
HindIII AAGCTT 1 cut(s) 1980
HinfI GANTC 8 cut(s) 202, 305, 520, 767, 1241, 1325, 1409, 1842
HpaII CCGG 1 cut(s) 206
HphI GGTGA 6 cut(s) 102, 197, 619, 1345, 1700, 1810
Hpy166II GTNNAC 6 cut(s) 610, 676, 739, 1195, 1365, 1474
Hpy188I TCNGA 7 cut(s) 166, 408, 495, 1095, 1330, 1957, 2008
Hpy8I GTNNAC 6 cut(s) 610, 676, 739, 1195, 1365, 1474
HpyAV CCTTC 6 cut(s) 346, 389, 569, 805, 1085, 1910
HpyCH4III ACNGT 4 cut(s) 8, 743, 1434, 1510
HpyCH4IV ACGT 8 cut(s) 107, 283, 735, 1054, 1107, 1470, 1514, 1878
HpyF10VI GCNNNNNNNGC 6 cut(s) 464, 677, 803, 812, 1502, 1589
HpyF3I CTNAG 4 cut(s) 494, 763, 1452, 1956
HpySE526I ACGT 8 cut(s) 107, 283, 735, 1054, 1107, 1470, 1514, 1878
HspAI GCGC 3 cut(s) 1373, 1679, 1891
Kpn2I TCCGGA 1 cut(s) 205
Ksp22I TGATCA 3 cut(s) 64, 1782, 1974
Kzo9I GATC 7 cut(s) 19, 64, 166, 953, 1690, 1782, 1974
LguI GCTCTTC 1 cut(s) 1485
LmnI GCTCC 3 cut(s) 14, 631, 908
Lsp1109I GCAGC 3 cut(s) 310, 997, 1507
LweI GCATC 4 cut(s) 476, 613, 920, 1140
MabI ACCWGGT 1 cut(s) 1537
MaeI CTAG 7 cut(s) 23, 347, 489, 1260, 1311, 1445, 1694
MaeII ACGT 8 cut(s) 107, 283, 735, 1054, 1107, 1470, 1514, 1878
MaeIII GTNAC 5 cut(s) 108, 472, 1265, 1510, 1816
MalI GATC 7 cut(s) 21, 66, 168, 955, 1692, 1784, 1976
MboI GATC 7 cut(s) 19, 64, 166, 953, 1690, 1782, 1974
MfeI CAATTG 1 cut(s) 1791
MflI RGATCY 2 cut(s) 19, 166
MlsI TGGCCA 1 cut(s) 1592
MluNI TGGCCA 1 cut(s) 1592
MlyI GAGTC 3 cut(s) 196, 1235, 1334
MmeI TCCRAC 1 cut(s) 144
Mox20I TGGCCA 1 cut(s) 1592
Mph1103I ATGCAT 2 cut(s) 1155, 1757
MroI TCCGGA 1 cut(s) 205
MroXI GAANNNNTTC 2 cut(s) 77, 655
MscI TGGCCA 1 cut(s) 1592
MseI TTAA 9 cut(s) 156, 534, 759, 947, 1038, 1080, 1304, 1416, 1424
MslI CAYNNNNRTG 3 cut(s) 1176, 1398, 1750
Msp20I TGGCCA 1 cut(s) 1592
MspA1I CMGCKG 1 cut(s) 90
MspCI CTTAAG 2 cut(s) 533, 1303
MspI CCGG 1 cut(s) 206
MspR9I CCNGG 2 cut(s) 183, 1539
MunI CAATTG 1 cut(s) 1791
Mva1269I GAATGC 1 cut(s) 1766
MvaI CCWGG 2 cut(s) 183, 1539
MvnI CGCG 1 cut(s) 614
MwoI GCNNNNNNNGC 6 cut(s) 464, 677, 803, 812, 1502, 1589
NdeII GATC 7 cut(s) 19, 64, 166, 953, 1690, 1782, 1974
NheI GCTAGC 1 cut(s) 1259
NlaIV GGNNCC 1 cut(s) 103
NmeAIII GCCGAG 1 cut(s) 1348
NmuCI GTSAC 3 cut(s) 108, 1510, 1816
NsiI ATGCAT 2 cut(s) 1155, 1757
NspI RCATGY 5 cut(s) 422, 530, 803, 1721, 1759
NspV TTCGAA 2 cut(s) 770, 1407
OliI CACNNNNGTG 1 cut(s) 1398
PaeI GCATGC 1 cut(s) 1759
PagI TCATGA 3 cut(s) 61, 1224, 1354
PceI AGGCCT 1 cut(s) 1127
PciI ACATGT 4 cut(s) 418, 526, 799, 1717
PciSI GCTCTTC 1 cut(s) 1485
PcsI WCGNNNNNNNCGW 2 cut(s) 1026, 1482
PctI GAATGC 1 cut(s) 1766
PdmI GAANNNNTTC 2 cut(s) 77, 655
PfeI GAWTC 5 cut(s) 305, 520, 767, 1409, 1842
PflFI GACNNNGTC 1 cut(s) 1089
PkrI GCNGC 6 cut(s) 325, 1012, 1114, 1301, 1495, 1522
PleI GAGTC 3 cut(s) 196, 1235, 1333
PmaCI CACGTG 1 cut(s) 1108
PmlI CACGTG 1 cut(s) 1108
PpsI GAGTC 3 cut(s) 196, 1235, 1333
Ppu21I YACGTR 1 cut(s) 1108
PscI ACATGT 4 cut(s) 418, 526, 799, 1717
PsiI TTATAA 2 cut(s) 927, 1049
Psp1406I AACGTT 1 cut(s) 1054
Psp6I CCWGG 2 cut(s) 181, 1537
PspCI CACGTG 1 cut(s) 1108
PspGI CCWGG 2 cut(s) 181, 1537
PspN4I GGNNCC 1 cut(s) 103
PspPI GGNCC 2 cut(s) 739, 1871
PstI CTGCAG 1 cut(s) 1525
PsuI RGATCY 2 cut(s) 19, 166
PsyI GACNNNGTC 1 cut(s) 1089
RsaI GTAC 5 cut(s) 148, 499, 563, 665, 1666
RsaNI GTAC 5 cut(s) 147, 498, 562, 664, 1665
RseI CAYNNNNRTG 3 cut(s) 1176, 1398, 1750
SapI GCTCTTC 1 cut(s) 1485
SaqAI TTAA 9 cut(s) 156, 534, 759, 947, 1038, 1080, 1304, 1416, 1424
SatI GCNGC 6 cut(s) 324, 1011, 1113, 1300, 1494, 1521
Sau3AI GATC 7 cut(s) 19, 64, 166, 953, 1690, 1782, 1974
Sau96I GGNCC 2 cut(s) 739, 1871
ScaI AGTACT 1 cut(s) 499
SchI GAGTC 3 cut(s) 196, 1235, 1334
ScrFI CCNGG 2 cut(s) 183, 1539
SexAI ACCWGGT 1 cut(s) 1537
SfaNI GCATC 4 cut(s) 476, 613, 920, 1140
SfcI CTRYAG 3 cut(s) 1521, 1886, 1944
SfuI TTCGAA 2 cut(s) 770, 1407
SinI GGWCC 1 cut(s) 739
SmiMI CAYNNNNRTG 3 cut(s) 1176, 1398, 1750
SmlI CTYRAG 5 cut(s) 397, 533, 1303, 1396, 1925
SmoI CTYRAG 5 cut(s) 397, 533, 1303, 1396, 1925
SpeI ACTAGT 1 cut(s) 346
SphI GCATGC 1 cut(s) 1759
SseBI AGGCCT 1 cut(s) 1127
SsiI CCGC 8 cut(s) 90, 413, 435, 614, 1112, 1299, 1493, 1904
SspMI CTAG 7 cut(s) 23, 347, 489, 1260, 1311, 1445, 1694
StuI AGGCCT 1 cut(s) 1127
StyD4I CCNGG 2 cut(s) 181, 1537
StyI CCWWGG 1 cut(s) 1867
TaaI ACNGT 4 cut(s) 8, 743, 1434, 1510
TaiI ACGT 8 cut(s) 110, 286, 738, 1057, 1110, 1473, 1517, 1881
TaqI TCGA 4 cut(s) 195, 387, 770, 1407
TatI WGTACW 3 cut(s) 497, 561, 1664
TauI GCSGC 3 cut(s) 1115, 1302, 1496
TfiI GAWTC 5 cut(s) 305, 520, 767, 1409, 1842
Tru1I TTAA 9 cut(s) 156, 534, 759, 947, 1038, 1080, 1304, 1416, 1424
Tru9I TTAA 9 cut(s) 156, 534, 759, 947, 1038, 1080, 1304, 1416, 1424
TscAI CASTG 4 cut(s) 1374, 1443, 1515, 1792
TseFI GTSAC 3 cut(s) 108, 1510, 1816
TseI GCWGC 3 cut(s) 323, 1010, 1520
Tsp45I GTSAC 3 cut(s) 108, 1510, 1816
TspDTI ATGAA 9 cut(s) 305, 864, 891, 894, 992, 1241, 1343, 1600, 1734
TspGWI ACGGA 3 cut(s) 85, 134, 921
TspRI CASTG 4 cut(s) 1374, 1443, 1515, 1792
Tth111I GACNNNGTC 1 cut(s) 1089
Vha464I CTTAAG 2 cut(s) 533, 1303
VpaK11BI GGWCC 1 cut(s) 739
XapI RAATTY 1 cut(s) 689
XbaI TCTAGA 1 cut(s) 22
XceI RCATGY 5 cut(s) 422, 530, 803, 1721, 1759
XmiI GTMKAC 1 cut(s) 675
XmnI GAANNNNTTC 2 cut(s) 77, 655
XspI CTAG 7 cut(s) 23, 347, 489, 1260, 1311, 1445, 1694
ZrmI AGTACT 1 cut(s) 499
Zsp2I ATGCAT 2 cut(s) 1155, 1757
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.