RchiOBHm_Chr5g0041111

ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0000494
Physical Location & Seq
Forward (+)
35786102 .. 35788502
2401 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ31955

Sequence Viewer

Length: 1998 bp
ATGCATCAAAATCAAATCCAGGACAGTCATCTAACCGATCACTCAAAATTGTACCATCAGTTGTACAGGTATGCTAGTGAGGGAAGGCAAACTGACTTTATCACAGCTATTCAGAAGGTTGCAAATTGTGATCAAAATGCTTCGATTCAGCTCCTGTCCCGACTGAGCCCGCTGAATAACTCATTTCTTCACACAGCAGTGACTTTCGGGCATGTAAGTCTAGCCATCAAGATCATGAAGCTTCACCCGCCACTTTTGTTGGTTAAAAACTTTGAAGGTGACACTGCACTCCACGTTGCGGCCAAAACCGGAGGGGGTGATGATAACCTGATAAGGTGCATTATGGAGCATGAGAATCTGGATTCTGGTGAAGGTCAAGCGACGGACATTGAAAAGGTTGATATATCAGTGTTCAGAATGAAAAATGATGAGGAAAATACTCCCTTGCATGAGGCCCTGATAAATGGTAATCACTTGGAGGCAAAGTATTTGATCAAGGCTGATCCTTCAGTTTCATTTTGTGCCAACGAGGAGAGAAAGTCCCCTTTGTATCTAGCTGCAGAAGCTGGGCTCGTTGAAATTGTGAAGCTAATATATGACACTACTGCAGTTCAGAATAACACAGGTGATCAAGGTAATGGCGTGCCGCCTATGAACTTGGTGATGGAGGGCAAGTCCCCGTTGCATGCTGCGATTCTCAGCCAGAAGGAAGATGTCCTAGGCATACTATCAAGAATGCGATTCACCGTAGAGCATTTAGAAGACGAGAAAGGGAGGACTCCACTTCATTGTGCAGCATCAACAGGTTATCTCGAAGGGCTTCGCTTCCTATTAAAAAGATGTTTATCCGATTCTCATCGAGCAGATAGTGGTGGCACCTTTCCAATCCATTCTGCATCAAGCAAAGGTCATGTTCCTATAGTTAAGCTGCTTCTTGAACATTATCCCGATTTAAAGGAATTGAGGAACTCGAGTGGAGAAAACATTCTTCATGTTGCAGCAAAGTGTGGCAGGGACAATCTTGTGAAATATTTTCTCGAGAAAGGTGAATTTAAGATGTTGATAAACCAAAAAAACAAAGCTGGAAATACTCCTTTACATTTGGCTACAATTTACCAACATCCAGCAGTTGTGAACATCCTGACTTGGGATAAAAGGACCAATTTGAAGCTCTTGAATGTAAGAGGCATGACAGCTCTTGATATTGCAGAAAATACTCTGGAAACTACTCCATCGTTCCACCGGAGGCTAGCATGGATAGCACTGAAATCAGCGGGTGCACAGCAAGCTCAAAGTTCGAATATATGGAAAACAGGACAGAATACACAGCAGGATTTGTTAGTTTCGGCAACTAAACCACTAGGAGGCAACGGTGGAGATGTCAGAACTAAAATTGAAGATGCTACGGACAGAGTTATAAATTCTTGTAACAATATTCAGCTAGTGTTACCAAACAAGCAAAGCAATAAGGACACAGTCAATACTCTTTTGGTGGTGACTACACTCATTGCCACAGTGTCGTTTGCAGCTGGTTTCACAATGCCAGGCGGCTACAATAACTCCGGCCCTCATGAGGGCACGGCAACTTTGCTAAATAAAGAAATGTTCCAAGTCTTCGTGATCTGCAACACACTTGCTATGTATAATTCTGTCCTTGTTGCAATCACTCTCATTTGGGCACAACTAGGGGATTTAAGCTTGGTGCCTCTTCGTATAGCATTGCCACTGTTGGGGCTCGCGCTTACAATGCTGTCCTTAGCATTCATGGCTGGAGTTTTTGTAGTAGTTAGTAGTCTTCAGTGGCTAGCTAGCGTTGTGATGATCATGGGTGTAGTTTTCCTTTTCACCGTGATAGCACTATTCACTCCACTCTTCTTCCCTTCCAAACTGTTCCCAACTTCCTCCACTTTCCGTGTACGTCGTTACATCATCTATTATCCTTTCCGTTTGGCAGTACTGGTTTCTGGAAGTCACAAAGACTTTGAAGAAGAAGACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04310 map04310
Pfam Domains
Protein Families
Ank Ank_2 Ank_4 PGG

Protein Analysis

665

Amino Acids

73.37

Weight (kDa)

6.93

Isoelectric Point (pI)

33.71

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 140 - 202 4.8e-08 Ankyrin repeats (3 copies)
Ank_2 PF12796 223 - 279 1.8e-07 Ankyrin repeats (3 copies)
Ank_2 PF12796 289 - 350 1.8e-10 Ankyrin repeats (3 copies)
Ank_2 PF12796 296 - 385 1.5e-14 Ankyrin repeats (3 copies)
Ank_4 PF13637 296 - 346 2.5e-06 Ankyrin repeats (many copies)
Ank_5 PF13857 322 - 369 3.9e-08 Ankyrin repeats (many copies)
PGG PF13962 488 - 595 3.4e-29 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000494)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G03670 AT4G03440 AT4G03440 AT4G03440 AT4G03450 AT4G03450 AT4G03460 AT4G03460 AT4G03470 AT4G03480 AT4G03480 AT4G03490 AT4G03490 AT4G03490 AT4G03490 AT4G03490 AT4G03500 AT4G03500 AT4G03500 AT4G03505 AT4G05040 AT4G05040 AT4G05040 AT4G05040 AT4G05040 AT4G05040 AT4G05040 AT4G14390 AT4G14390 AT4G14390 AT4G14390 AT4G14400 AT4G14400 AT4G14400
fragaria_vesca FvH4_3g05910 FvH4_3g23320
malus_domestica MD03G1094000.v1.1 MD03G1094200.v1.1 MD03G1094600.v1.1 MD12G1218700.v1.1
prunus_persica Prupe.3G135100_v2.0.a1 Prupe.3G135200_v2.0.a1 Prupe.3G135700_v2.0.a1 Prupe.3G135700_v2.0.a1 Prupe.3G142400_v2.0.a1 Prupe.3G153800_v2.0.a1 Prupe.3G153800_v2.0.a1 Prupe.3G153800_v2.0.a1 Prupe.3G153800_v2.0.a1 Prupe.3G154000_v2.0.a1 Prupe.3G154200_v2.0.a1 Prupe.3G154200_v2.0.a1 Prupe.3G154600_v2.0.a1 Prupe.3G154700_v2.0.a1 Prupe.3G155200_v2.0.a1 Prupe.3G155300_v2.0.a1 Prupe.8G110300_v2.0.a1
pyrus_communis pycom03g07280 pycom03g07580 pycom03g07660 pycom03g07700 pycom03g07710
rosa_chinensis RchiOBHm_Chr3g0461161 RchiOBHm_Chr5g0041111
rosa_laevigata RLG00000023472 RLG00000023475 RLG00000034025
rosa_multiflora Rmu_co8126040.1_g000001 Rmu_co8268563.1_g000001 Rmu_sc0000964.1_g000014 Rmu_sc0028923.1_g000001 Rmu_sc0042194.1_g000001
rosa_roxburghii Rroxscaffold_1G00039610 Rroxscaffold_6G00401360
rosa_rugosa Rorug03G0048600 Rorug03G0048700 Rorug05G0190000
rosa_samantha Rh3AG105900 Rh3BG110200 Rh3BG268400 Rh3CG111800 Rh3DG111900 Rh5AG275800 Rh5BG280500 Rh5CG312600 Rh5DG288800
rosa_wichuraiana Rw3G009080 Rw5G025920

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1418
AccB1I GGYRCC 2 cut(s) 875, 1702
AccII CGCG 1 cut(s) 1739
AciI CCGC 6 cut(s) 170, 248, 299, 647, 1274, 1548
AclWI GGATC 1 cut(s) 497
AcoI YGGCCR 1 cut(s) 300
AcsI RAATTY 2 cut(s) 1049, 1420
AcuI CTGAAG 2 cut(s) 492, 1781
AfaI GTAC 4 cut(s) 53, 65, 1917, 1956
AfiI CCNNNNNNNGG 6 cut(s) 298, 1147, 1364, 1573, 1574, 1730
AgsI TTSAA 8 cut(s) 275, 392, 578, 938, 1168, 1177, 1397, 1985
AjnI CCWGG 2 cut(s) 18, 1543
AleI CACNNNNGTG 1 cut(s) 197
Alw21I GWGCWC 1 cut(s) 1282
Alw44I GTGCAC 1 cut(s) 1278
AlwI GGATC 1 cut(s) 497
AlwNI CAGNNNCTG 2 cut(s) 154, 566
Ama87I CYCGRG 2 cut(s) 970, 1037
AoxI GGCC 3 cut(s) 300, 453, 1564
ApaLI GTGCAC 1 cut(s) 1278
ApeKI GCWGC 6 cut(s) 557, 689, 794, 928, 998, 1526
ApoI RAATTY 2 cut(s) 1049, 1420
Asp700I GAANNNNTTC 2 cut(s) 819, 984
AspA2I CCTAGG 1 cut(s) 718
AspLEI GCGC 1 cut(s) 1741
AspS9I GGNCC 3 cut(s) 454, 1158, 1565
AsuII TTCGAA 1 cut(s) 1298
AsuNHI GCTAGC 3 cut(s) 1249, 1804, 1808
AvaI CYCGRG 2 cut(s) 970, 1037
AvaII GGWCC 1 cut(s) 1158
AvrII CCTAGG 1 cut(s) 718
BaeGI GKGCMC 3 cut(s) 1282, 1580, 1681
BanI GGYRCC 2 cut(s) 875, 1702
BanII GRGCYC 3 cut(s) 170, 573, 1737
BbsI GAAGAC 3 cut(s) 768, 1606, 1787
Bbv12I GWGCWC 1 cut(s) 1282
BbvI GCAGC 6 cut(s) 544, 676, 806, 915, 1010, 1538
BccI CCATC 4 cut(s) 63, 233, 658, 1240
BceAI ACGGC 1 cut(s) 1596
BciT130I CCWGG 2 cut(s) 20, 1545
BclI TGATCA 4 cut(s) 130, 492, 628, 1821
BfmI CTRYAG 3 cut(s) 558, 606, 918
BisI GCNGC 9 cut(s) 300, 558, 647, 690, 795, 929, 999, 1527, 1549
BlnI CCTAGG 1 cut(s) 718
BlsI GCNGC 9 cut(s) 301, 559, 648, 691, 796, 930, 1000, 1528, 1550
BmcAI AGTACT 1 cut(s) 1956
Bme1390I CCNGG 2 cut(s) 20, 1545
Bme18I GGWCC 1 cut(s) 1158
BmeT110I CYCGRG 2 cut(s) 970, 1037
BmgT120I GGNCC 3 cut(s) 454, 1158, 1565
BmiI GGNNCC 2 cut(s) 877, 1704
BmrFI CCNGG 2 cut(s) 20, 1545
BmsI GCATC 4 cut(s) 13, 806, 905, 1390
BmtI GCTAGC 3 cut(s) 1253, 1808, 1812
BpiI GAAGAC 3 cut(s) 768, 1606, 1787
BpmI CTGGAG 1 cut(s) 1791
Bpu10I CCTNAGC 1 cut(s) 1756
Bpu14I TTCGAA 1 cut(s) 1298
BsaBI GATNNNNATC 2 cut(s) 844, 855
BsaJI CCNNGG 1 cut(s) 718
BsaWI WCCGGW 2 cut(s) 308, 1242
Bsc4I CCNNNNNNNGG 6 cut(s) 298, 1147, 1364, 1573, 1574, 1730
Bse1I ACTGG 1 cut(s) 1962
Bse3DI GCAATG 2 cut(s) 1506, 1718
Bse8I GATNNNNATC 2 cut(s) 844, 855
BseBI CCWGG 2 cut(s) 20, 1545
BseDI CCNNGG 1 cut(s) 718
BseGI GGATG 2 cut(s) 1120, 1137
BseJI GATNNNNATC 2 cut(s) 844, 855
BseLI CCNNNNNNNGG 6 cut(s) 298, 1147, 1364, 1573, 1574, 1730
BseMI GCAATG 2 cut(s) 1506, 1718
BseMII CTCAG 2 cut(s) 155, 712
BseNI ACTGG 1 cut(s) 1962
BseRI GAGGAG 1 cut(s) 545
BseSI GKGCMC 3 cut(s) 1282, 1580, 1681
BseXI GCAGC 6 cut(s) 544, 676, 806, 915, 1010, 1538
BseYI CCCAGC 1 cut(s) 566
BsgI GTGCAG 2 cut(s) 270, 813
Bsh1236I CGCG 1 cut(s) 1739
BshFI GGCC 3 cut(s) 302, 455, 1566
BshNI GGYRCC 2 cut(s) 875, 1702
BsiHKAI GWGCWC 1 cut(s) 1282
BsiHKCI CYCGRG 2 cut(s) 970, 1037
BsiSI CCGG 3 cut(s) 309, 1243, 1563
BslFI GGGAC 4 cut(s) 142, 526, 661, 1028
BslI CCNNNNNNNGG 6 cut(s) 298, 1147, 1364, 1573, 1574, 1730
BsmFI GGGAC 4 cut(s) 142, 526, 661, 1028
BsmI GAATGC 2 cut(s) 741, 1760
BsnI GGCC 3 cut(s) 302, 455, 1566
BsoBI CYCGRG 2 cut(s) 970, 1037
Bsp119I TTCGAA 1 cut(s) 1298
Bsp1286I GDGCHC 6 cut(s) 170, 573, 1282, 1580, 1681, 1737
Bsp1407I TGTACA 1 cut(s) 63
Bsp143I GATC 8 cut(s) 37, 130, 231, 492, 502, 628, 1620, 1821
BspACI CCGC 6 cut(s) 170, 248, 299, 647, 1274, 1548
BspANI GGCC 3 cut(s) 302, 455, 1566
BspCNI CTCAG 2 cut(s) 156, 711
BspFNI CGCG 1 cut(s) 1739
BspHI TCATGA 2 cut(s) 234, 1570
BspLI GGNNCC 2 cut(s) 877, 1704
BspMAI CTGCAG 2 cut(s) 562, 610
BspOI GCTAGC 3 cut(s) 1253, 1808, 1812
BspPI GGATC 1 cut(s) 497
BspT104I TTCGAA 1 cut(s) 1298
BspT107I GGYRCC 2 cut(s) 875, 1702
BsrDI GCAATG 2 cut(s) 1506, 1718
BsrGI TGTACA 1 cut(s) 63
BsrI ACTGG 1 cut(s) 1962
BssECI CCNNGG 1 cut(s) 718
BssMI GATC 8 cut(s) 37, 130, 231, 492, 502, 628, 1620, 1821
BssT1I CCWWGG 1 cut(s) 718
Bst2UI CCWGG 2 cut(s) 20, 1545
Bst4CI ACNGT 8 cut(s) 26, 748, 1373, 1477, 1516, 1728, 1849, 1890
Bst6I CTCTTC 2 cut(s) 1713, 1877
BstAUI TGTACA 1 cut(s) 63
BstBI TTCGAA 1 cut(s) 1298
BstC8I GCNNGC 8 cut(s) 170, 644, 687, 1251, 1287, 1737, 1806, 1810
BstDEI CTNAG 3 cut(s) 164, 698, 1756
BstF5I GGATG 2 cut(s) 1120, 1137
BstFNI CGCG 1 cut(s) 1739
BstHHI GCGC 1 cut(s) 1741
BstKTI GATC 8 cut(s) 40, 133, 234, 495, 505, 631, 1623, 1824
BstMBI GATC 8 cut(s) 37, 130, 231, 492, 502, 628, 1620, 1821
BstMWI GCNNNNNNNGC 6 cut(s) 247, 563, 1259, 1286, 1747, 1766
BstNI CCWGG 2 cut(s) 20, 1545
BstNSI RCATGY 2 cut(s) 215, 689
BstSCI CCNGG 2 cut(s) 18, 1543
BstSFI CTRYAG 3 cut(s) 558, 606, 918
BstSLI GKGCMC 3 cut(s) 1282, 1580, 1681
BstUI CGCG 1 cut(s) 1739
BstV1I GCAGC 6 cut(s) 544, 676, 806, 915, 1010, 1538
BstV2I GAAGAC 3 cut(s) 768, 1606, 1787
BsuRI GGCC 3 cut(s) 302, 455, 1566
BtsCI GGATG 2 cut(s) 1120, 1137
BtsI GCAGTG 2 cut(s) 204, 282
BtsIMutI CAGTG 7 cut(s) 204, 282, 414, 1262, 1521, 1724, 1805
Cac8I GCNNGC 8 cut(s) 170, 644, 687, 1251, 1287, 1737, 1806, 1810
CaiI CAGNNNCTG 2 cut(s) 154, 566
CciI TCATGA 2 cut(s) 234, 1570
CfoI GCGC 1 cut(s) 1741
Cfr13I GGNCC 3 cut(s) 454, 1158, 1565
Csp6I GTAC 4 cut(s) 52, 64, 1916, 1955
CspCI CAANNNNNGTGG 2 cut(s) 240, 275
CviQI GTAC 4 cut(s) 52, 64, 1916, 1955
DdeI CTNAG 3 cut(s) 164, 698, 1756
DpnI GATC 8 cut(s) 39, 132, 233, 494, 504, 630, 1622, 1823
DpnII GATC 8 cut(s) 37, 130, 231, 492, 502, 628, 1620, 1821
DraI TTTAAA 1 cut(s) 954
EaeI YGGCCR 1 cut(s) 300
Eam1104I CTCTTC 2 cut(s) 1713, 1877
EarI CTCTTC 2 cut(s) 1713, 1877
Eco130I CCWWGG 1 cut(s) 718
Eco24I GRGCYC 3 cut(s) 170, 573, 1737
Eco47I GGWCC 1 cut(s) 1158
Eco57I CTGAAG 2 cut(s) 492, 1781
Eco88I CYCGRG 2 cut(s) 970, 1037
EcoO109I RGGNCCY 1 cut(s) 454
EcoRII CCWGG 2 cut(s) 18, 1543
EcoT14I CCWWGG 1 cut(s) 718
EcoT22I ATGCAT 1 cut(s) 6
EcoT38I GRGCYC 3 cut(s) 170, 573, 1737
ErhI CCWWGG 1 cut(s) 718
FaqI GGGAC 4 cut(s) 142, 526, 661, 1028
FauI CCCGC 3 cut(s) 177, 255, 1267
FbaI TGATCA 4 cut(s) 130, 492, 628, 1821
Fnu4HI GCNGC 9 cut(s) 300, 558, 647, 690, 795, 929, 999, 1527, 1549
FokI GGATG 2 cut(s) 1107, 1124
FriOI GRGCYC 3 cut(s) 170, 573, 1737
Fsp4HI GCNGC 9 cut(s) 300, 558, 647, 690, 795, 929, 999, 1527, 1549
GlaI GCGC 1 cut(s) 1740
GluI GCNGC 9 cut(s) 300, 558, 647, 690, 795, 929, 999, 1527, 1549
GsaI CCCAGC 1 cut(s) 570
GsuI CTGGAG 1 cut(s) 1791
HaeIII GGCC 3 cut(s) 302, 455, 1566
HapII CCGG 3 cut(s) 309, 1243, 1563
HhaI GCGC 1 cut(s) 1741
Hin6I GCGC 1 cut(s) 1739
HinP1I GCGC 1 cut(s) 1739
HindIII AAGCTT 2 cut(s) 239, 1696
HinfI GANTC 7 cut(s) 145, 355, 362, 694, 741, 778, 851
HpaII CCGG 3 cut(s) 309, 1243, 1563
Hpy166II GTNNAC 3 cut(s) 1135, 1280, 1916
Hpy188I TCNGA 5 cut(s) 114, 416, 615, 850, 1385
Hpy8I GTNNAC 3 cut(s) 1135, 1280, 1916
Hpy99I CGWCG 2 cut(s) 385, 1923
HpyAV CCTTC 8 cut(s) 78, 109, 269, 365, 516, 700, 809, 1890
HpyCH4III ACNGT 8 cut(s) 26, 748, 1373, 1477, 1516, 1728, 1849, 1890
HpyCH4IV ACGT 2 cut(s) 294, 1918
HpyF10VI GCNNNNNNNGC 6 cut(s) 247, 563, 1259, 1286, 1747, 1766
HpyF3I CTNAG 3 cut(s) 164, 698, 1756
HpySE526I ACGT 2 cut(s) 294, 1918
HspAI GCGC 1 cut(s) 1739
Ksp22I TGATCA 4 cut(s) 130, 492, 628, 1821
Kzo9I GATC 8 cut(s) 37, 130, 231, 492, 502, 628, 1620, 1821
LmnI GCTCC 2 cut(s) 156, 346
Lsp1109I GCAGC 6 cut(s) 544, 676, 806, 915, 1010, 1538
LweI GCATC 4 cut(s) 13, 806, 905, 1390
MaeII ACGT 2 cut(s) 294, 1918
MaeIII GTNAC 7 cut(s) 199, 278, 1427, 1446, 1495, 1922, 1970
MalI GATC 8 cut(s) 39, 132, 233, 494, 504, 630, 1622, 1823
MboI GATC 8 cut(s) 37, 130, 231, 492, 502, 628, 1620, 1821
MhlI GDGCHC 6 cut(s) 170, 573, 1282, 1580, 1681, 1737
MlyI GAGTC 1 cut(s) 772
Mph1103I ATGCAT 1 cut(s) 6
MroXI GAANNNNTTC 2 cut(s) 819, 984
MseI TTAA 6 cut(s) 264, 833, 924, 953, 1053, 1694
MslI CAYNNNNRTG 1 cut(s) 197
MspA1I CMGCKG 3 cut(s) 172, 1274, 1529
MspI CCGG 3 cut(s) 309, 1243, 1563
MspR9I CCNGG 2 cut(s) 20, 1545
Mva1269I GAATGC 2 cut(s) 741, 1760
MvaI CCWGG 2 cut(s) 20, 1545
MvnI CGCG 1 cut(s) 1739
MwoI GCNNNNNNNGC 6 cut(s) 247, 563, 1259, 1286, 1747, 1766
NdeII GATC 8 cut(s) 37, 130, 231, 492, 502, 628, 1620, 1821
NheI GCTAGC 3 cut(s) 1249, 1804, 1808
NlaIV GGNNCC 2 cut(s) 877, 1704
NmuCI GTSAC 4 cut(s) 199, 278, 1495, 1970
NsiI ATGCAT 1 cut(s) 6
NspI RCATGY 2 cut(s) 215, 689
NspV TTCGAA 1 cut(s) 1298
OliI CACNNNNGTG 1 cut(s) 197
PaeI GCATGC 1 cut(s) 689
PaeR7I CTCGAG 2 cut(s) 970, 1037
PagI TCATGA 2 cut(s) 234, 1570
PctI GAATGC 2 cut(s) 741, 1760
PdmI GAANNNNTTC 2 cut(s) 819, 984
PfeI GAWTC 6 cut(s) 145, 355, 362, 694, 741, 851
PflFI GACNNNGTC 1 cut(s) 1475
PfoI TCCNGGA 1 cut(s) 18
PkrI GCNGC 9 cut(s) 301, 559, 648, 691, 796, 930, 1000, 1528, 1550
PleI GAGTC 1 cut(s) 772
PpsI GAGTC 1 cut(s) 772
PsiI TTATAA 1 cut(s) 1418
Psp6I CCWGG 2 cut(s) 18, 1543
PspFI CCCAGC 1 cut(s) 566
PspGI CCWGG 2 cut(s) 18, 1543
PspN4I GGNNCC 2 cut(s) 877, 1704
PspPI GGNCC 3 cut(s) 454, 1158, 1565
PspXI VCTCGAGB 1 cut(s) 970
PstI CTGCAG 2 cut(s) 562, 610
PstNI CAGNNNCTG 2 cut(s) 154, 566
PsyI GACNNNGTC 1 cut(s) 1475
PvuII CAGCTG 1 cut(s) 1529
RsaI GTAC 4 cut(s) 53, 65, 1917, 1956
RsaNI GTAC 4 cut(s) 52, 64, 1916, 1955
RseI CAYNNNNRTG 1 cut(s) 197
SaqAI TTAA 6 cut(s) 264, 833, 924, 953, 1053, 1694
SatI GCNGC 9 cut(s) 300, 558, 647, 690, 795, 929, 999, 1527, 1549
Sau3AI GATC 8 cut(s) 37, 130, 231, 492, 502, 628, 1620, 1821
Sau96I GGNCC 3 cut(s) 454, 1158, 1565
ScaI AGTACT 1 cut(s) 1956
SchI GAGTC 1 cut(s) 772
ScrFI CCNGG 2 cut(s) 20, 1545
SduI GDGCHC 6 cut(s) 170, 573, 1282, 1580, 1681, 1737
SfaNI GCATC 4 cut(s) 13, 806, 905, 1390
SfcI CTRYAG 3 cut(s) 558, 606, 918
Sfr274I CTCGAG 2 cut(s) 970, 1037
SfuI TTCGAA 1 cut(s) 1298
SinI GGWCC 1 cut(s) 1158
SlaI CTCGAG 2 cut(s) 970, 1037
SmiMI CAYNNNNRTG 1 cut(s) 197
SmlI CTYRAG 2 cut(s) 970, 1037
SmoI CTYRAG 2 cut(s) 970, 1037
SphI GCATGC 1 cut(s) 689
SsiI CCGC 6 cut(s) 170, 248, 299, 647, 1274, 1548
SspI AATATT 2 cut(s) 1031, 1435
StyD4I CCNGG 2 cut(s) 18, 1543
StyI CCWWGG 1 cut(s) 718
TaaI ACNGT 8 cut(s) 26, 748, 1373, 1477, 1516, 1728, 1849, 1890
TaiI ACGT 2 cut(s) 297, 1921
TaqI TCGA 6 cut(s) 143, 813, 859, 971, 1038, 1298
TatI WGTACW 2 cut(s) 63, 1954
TauI GCSGC 3 cut(s) 302, 649, 1551
TfiI GAWTC 6 cut(s) 145, 355, 362, 694, 741, 851
Tru1I TTAA 6 cut(s) 264, 833, 924, 953, 1053, 1694
Tru9I TTAA 6 cut(s) 264, 833, 924, 953, 1053, 1694
TscAI CASTG 7 cut(s) 204, 289, 414, 1269, 1521, 1731, 1805
TseFI GTSAC 4 cut(s) 199, 278, 1495, 1970
TseI GCWGC 6 cut(s) 557, 689, 794, 928, 998, 1526
Tsp45I GTSAC 4 cut(s) 199, 278, 1495, 1970
TspDTI ATGAA 7 cut(s) 251, 434, 504, 668, 776, 980, 1753
TspGWI ACGGA 4 cut(s) 398, 1421, 1901, 1934
TspRI CASTG 7 cut(s) 204, 289, 414, 1269, 1521, 1731, 1805
Tth111I GACNNNGTC 1 cut(s) 1475
VneI GTGCAC 1 cut(s) 1278
VpaK11BI GGWCC 1 cut(s) 1158
XapI RAATTY 2 cut(s) 1049, 1420
XceI RCATGY 2 cut(s) 215, 689
XhoI CTCGAG 2 cut(s) 970, 1037
XmaJI CCTAGG 1 cut(s) 718
XmnI GAANNNNTTC 2 cut(s) 819, 984
ZrmI AGTACT 1 cut(s) 1956
Zsp2I ATGCAT 1 cut(s) 6
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.