MD03G1094600.v1.1

ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr03
OG0000494
Physical Location & Seq
Reverse (-)
7963246 .. 7965486
2241 bp
Loading structure...
UTR
Exon/CDS
Intron
MD03G1094600.v1.1.491

Sequence Viewer

Length: 1374 bp
ATGTTTTTGGTCGGCAAAGATGGATCTACGGCGCATTCTACAAATAACTCCAGTAAGACTCCCTTGTGCATGGCCGCTGAAACTGCCAATCTTGAACTCGTTAAAGCAATGGTAGCCAACACGCCAAATAGCATAGTAGATGCTAATTCTGGTAATTTTTGGCAAGGATCGAACGGCAACTTAATTCTTCGTAGTGCGATCATATGGAGGAAAAAGGATCTCCTAGAGACGATATTGAGCAAAATGGATTCAGCTGATCTAATCAATTCAACGGACCAAAAGTGGATGACTCCTCTTACTCTTGCGGCCTATATAGGTAACTTTGTGGCGGTACGCGTATTGTTACACAAATTTACTGGATTGGCATACAAAGGTGACGAAAATCAGTTCCTTCTCATACATGTGGCGTCCAAAAAAGGCCATTGCAGGGTTGTAGAAGAGTTTCTCAATCATTGCCCCGACTTGAGGGAGTCATGTGATGGTGAAGGCCGGAATATTCTTCATGTTGCGGCCGCGCATGGAAGAGTTAATGTTGTCCGATATATTATTGGAAAGCGCAATCTTCAAGTGCTTAGGAAGCAAAGAGATCAAAGTGGAAATACCCCTCTACATATAGCCGTCCGAAACTGGCATCCTAAGATTGTCATAATTCTTTCCCTCTTCCATGCGTATGAGAGAGCCAATTTAAATAGTTTGAACAATGCAGGTATGACGGCATTGGACCTTGTAGAGAAGACCGAGGTAGATAAAGAGATGTTCCTTCGGAGAAAACTGACACTTATGGCCTTGAACTTGGCTAATGCTCCACGATCTGAAGAGCTAACAGCCGCCAAAGCAAAGCTAGTGATAGAGGATTCTGTTCTGAAGTCCTTGCACAATTCTGATAACTTAATGTTTTCGAAAGAGAGTGTCAATACTCTCCTATTGGTGTCAACGTTGGTGGTTGGTATAACGTTTGTTCAAGGCTTCACAATACCAGGTGGATACAGTAGCTCTGGAAATGATGTGGGCACCCCAATTTTTCTTACGCATAGCCTATTCAAATTTTTCTTGATATGCAATACCGTGGCGATGTGCGGCTCCATTACTGCTTCAATTCCCCTTATGTGGGCACAAACGCATGACCCTAATATAATCTATGCTGCCATGAGATTTACCTTAAAGGTGCTAGGCGTAACGCTTACCATGATGTCCTCGTCATTCCTGGCTGGTGTTGCACTGACAGTGTATCACGTTTTATGGCTTCGCATCTTTGTTTATGCCATGGGATTTTTCTTCACCGTCTTCATAGTAGGGCTCCTTGCTCCTCTCATGGATGTTCCAGTTTCCTACGTACCTGGCCCAACACGTGCCTTCTTATTCTTTAGCTTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001101 GO:0002376 GO:0002831 GO:0002833 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0005886 GO:0005887 GO:0006464 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0008152 GO:0008219 GO:0009266 GO:0009314 GO:0009409 GO:0009416 GO:0009605 GO:0009607 GO:0009615 GO:0009617 GO:0009628 GO:0009719 GO:0009725 GO:0009751 GO:0009814 GO:0009816 GO:0009966 GO:0009987 GO:0010033 GO:0010646 GO:0012505 GO:0014070 GO:0016020 GO:0016021 GO:0016567 GO:0019538 GO:0023051 GO:0030176 GO:0031224 GO:0031226 GO:0031227 GO:0031347 GO:0031349 GO:0031984 GO:0032101 GO:0032103 GO:0032446 GO:0032870 GO:0035690 GO:0036211 GO:0042175 GO:0042221 GO:0042493 GO:0042742 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043900 GO:0043902 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044459 GO:0044464 GO:0045087 GO:0046677 GO:0048518 GO:0048583 GO:0048584 GO:0050789 GO:0050794 GO:0050826 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0065007 GO:0070647 GO:0070887 GO:0071229 GO:0071236 GO:0071310 GO:0071407 GO:0071446 GO:0071495 GO:0071704 GO:0071944 GO:0080134 GO:0098542 GO:0098827 GO:1900150 GO:1900424 GO:1900426 GO:1901564 GO:1901700 GO:1901701 GO:1902288 GO:1902290 GO:2000031 GO:2001023 GO:2001038
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank Ank_2 Ank_4 PGG

Protein Analysis

458

Amino Acids

50.52

Weight (kDa)

9.19

Isoelectric Point (pI)

30.72

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 133 - 219 8.2e-14 Ankyrin repeats (3 copies)
Ank_4 PF13637 133 - 183 3.1e-06 Ankyrin repeats (many copies)
Ank_5 PF13857 160 - 206 7e-07 Ankyrin repeats (many copies)
PGG PF13962 301 - 407 1.3e-21 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000494)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G03670 AT4G03440 AT4G03440 AT4G03440 AT4G03450 AT4G03450 AT4G03460 AT4G03460 AT4G03470 AT4G03480 AT4G03480 AT4G03490 AT4G03490 AT4G03490 AT4G03490 AT4G03490 AT4G03500 AT4G03500 AT4G03500 AT4G03505 AT4G05040 AT4G05040 AT4G05040 AT4G05040 AT4G05040 AT4G05040 AT4G05040 AT4G14390 AT4G14390 AT4G14390 AT4G14390 AT4G14400 AT4G14400 AT4G14400
fragaria_vesca FvH4_3g05910 FvH4_3g23320
malus_domestica MD03G1094000.v1.1 MD03G1094200.v1.1 MD03G1094600.v1.1 MD12G1218700.v1.1
prunus_persica Prupe.3G135100_v2.0.a1 Prupe.3G135200_v2.0.a1 Prupe.3G135700_v2.0.a1 Prupe.3G135700_v2.0.a1 Prupe.3G142400_v2.0.a1 Prupe.3G153800_v2.0.a1 Prupe.3G153800_v2.0.a1 Prupe.3G153800_v2.0.a1 Prupe.3G153800_v2.0.a1 Prupe.3G154000_v2.0.a1 Prupe.3G154200_v2.0.a1 Prupe.3G154200_v2.0.a1 Prupe.3G154600_v2.0.a1 Prupe.3G154700_v2.0.a1 Prupe.3G155200_v2.0.a1 Prupe.3G155300_v2.0.a1 Prupe.8G110300_v2.0.a1
pyrus_communis pycom03g07280 pycom03g07580 pycom03g07660 pycom03g07700 pycom03g07710
rosa_chinensis RchiOBHm_Chr3g0461161 RchiOBHm_Chr5g0041111
rosa_laevigata RLG00000023472 RLG00000023475 RLG00000034025
rosa_multiflora Rmu_co8126040.1_g000001 Rmu_co8268563.1_g000001 Rmu_sc0000964.1_g000014 Rmu_sc0028923.1_g000001 Rmu_sc0042194.1_g000001
rosa_roxburghii Rroxscaffold_1G00039610 Rroxscaffold_6G00401360
rosa_rugosa Rorug03G0048600 Rorug03G0048700 Rorug05G0190000
rosa_samantha Rh3AG105900 Rh3BG110200 Rh3BG268400 Rh3CG111800 Rh3DG111900 Rh5AG275800 Rh5BG280500 Rh5CG312600 Rh5DG288800
rosa_wichuraiana Rw3G009080 Rw5G025920

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 695
AccB1I GGYRCC 1 cut(s) 1010
AccII CGCG 2 cut(s) 336, 515
AciI CCGC 7 cut(s) 75, 305, 329, 509, 513, 828, 1077
AclI AACGTT 2 cut(s) 935, 953
AclWI GGATC 3 cut(s) 31, 175, 225
AcoI YGGCCR 2 cut(s) 72, 510
AcsI RAATTY 2 cut(s) 350, 1043
AcuI CTGAAG 2 cut(s) 834, 884
AcvI CACGTG 1 cut(s) 1349
AcyI GRCGYC 1 cut(s) 407
AfaI GTAC 2 cut(s) 333, 1335
AfiI CCNNNNNNNGG 4 cut(s) 427, 465, 1107, 1108
AflIII ACRYGT 3 cut(s) 334, 400, 1346
AgsI TTSAA 8 cut(s) 95, 270, 566, 697, 790, 962, 1042, 1095
AjnI CCWGG 3 cut(s) 976, 1203, 1336
AluBI AGCT 5 cut(s) 254, 820, 841, 993, 1368
AluI AGCT 5 cut(s) 254, 820, 841, 993, 1368
Alw26I GTCTC 1 cut(s) 221
AlwI GGATC 3 cut(s) 31, 175, 225
AoxI GGCC 7 cut(s) 72, 306, 418, 487, 510, 783, 1339
ApeKI GCWGC 1 cut(s) 1142
ApoI RAATTY 2 cut(s) 350, 1043
Asp700I GAANNNNTTC 1 cut(s) 441
AspLEI GCGC 3 cut(s) 34, 517, 558
AspS9I GGNCC 3 cut(s) 274, 721, 1340
AsuHPI GGTGA 3 cut(s) 386, 494, 1270
AsuII TTCGAA 1 cut(s) 899
AvaII GGWCC 2 cut(s) 274, 721
BaeGI GKGCMC 2 cut(s) 1013, 1114
BanI GGYRCC 1 cut(s) 1010
BanII GRGCYC 1 cut(s) 1299
BbrPI CACGTG 1 cut(s) 1349
BbsI GAAGAC 2 cut(s) 740, 1276
BbvI GCAGC 1 cut(s) 1129
BccI CCATC 2 cut(s) 14, 473
BceAI ACGGC 4 cut(s) 45, 190, 602, 729
BciT130I CCWGG 3 cut(s) 978, 1205, 1338
BciVI GTATCC 1 cut(s) 977
BcoDI GTCTC 1 cut(s) 221
BfaI CTAG 3 cut(s) 224, 842, 1169
BfuAI ACCTGC 1 cut(s) 695
BfuI GTATCC 1 cut(s) 977
BisI GCNGC 7 cut(s) 75, 306, 510, 513, 828, 1078, 1143
BlsI GCNGC 7 cut(s) 76, 307, 511, 514, 829, 1079, 1144
Bme1390I CCNGG 3 cut(s) 978, 1205, 1338
Bme18I GGWCC 2 cut(s) 274, 721
BmgT120I GGNCC 3 cut(s) 274, 721, 1340
BmiI GGNNCC 3 cut(s) 1012, 1081, 1298
BmrFI CCNGG 3 cut(s) 978, 1205, 1338
BmsI GCATC 3 cut(s) 130, 640, 1257
BpiI GAAGAC 2 cut(s) 740, 1276
BpmI CTGGAG 1 cut(s) 34
Bpu10I CCTNAGC 1 cut(s) 572
Bpu14I TTCGAA 1 cut(s) 899
BpuEI CTTGAG 1 cut(s) 484
BsaAI YACGTR 2 cut(s) 1333, 1349
BsaHI GRCGYC 1 cut(s) 407
BsaJI CCNNGG 3 cut(s) 738, 1065, 1263
Bsc4I CCNNNNNNNGG 4 cut(s) 427, 465, 1107, 1108
Bse1I ACTGG 4 cut(s) 51, 361, 632, 1322
Bse3DI GCAATG 3 cut(s) 114, 421, 451
BseBI CCWGG 3 cut(s) 978, 1205, 1338
BseDI CCNNGG 3 cut(s) 738, 1065, 1263
BseGI GGATG 3 cut(s) 291, 631, 1321
BseLI CCNNNNNNNGG 4 cut(s) 427, 465, 1107, 1108
BseMI GCAATG 3 cut(s) 114, 421, 451
BseNI ACTGG 4 cut(s) 51, 361, 632, 1322
BseRI GAGGAG 2 cut(s) 282, 1296
BseSI GKGCMC 2 cut(s) 1013, 1114
BseX3I CGGCCG 1 cut(s) 510
BseXI GCAGC 1 cut(s) 1129
Bsh1236I CGCG 2 cut(s) 336, 515
Bsh1285I CGRYCG 1 cut(s) 513
BshFI GGCC 7 cut(s) 74, 308, 420, 489, 512, 785, 1341
BshNI GGYRCC 1 cut(s) 1010
BsiEI CGRYCG 1 cut(s) 513
BsiSI CCGG 1 cut(s) 490
BslI CCNNNNNNNGG 4 cut(s) 427, 465, 1107, 1108
BsmAI GTCTC 1 cut(s) 221
BsmBI CGTCTC 1 cut(s) 221
BsmI GAATGC 1 cut(s) 34
BsnI GGCC 7 cut(s) 74, 308, 420, 489, 512, 785, 1341
Bsp119I TTCGAA 1 cut(s) 899
Bsp1286I GDGCHC 3 cut(s) 1013, 1114, 1299
Bsp143I GATC 7 cut(s) 23, 167, 198, 217, 256, 586, 809
Bsp19I CCATGG 1 cut(s) 1263
BspACI CCGC 7 cut(s) 75, 305, 329, 509, 513, 828, 1077
BspANI GGCC 7 cut(s) 74, 308, 420, 489, 512, 785, 1341
BspFNI CGCG 2 cut(s) 336, 515
BspLI GGNNCC 3 cut(s) 1012, 1081, 1298
BspMI ACCTGC 1 cut(s) 695
BspPI GGATC 3 cut(s) 31, 175, 225
BspQI GCTCTTC 1 cut(s) 810
BspT104I TTCGAA 1 cut(s) 899
BspT107I GGYRCC 1 cut(s) 1010
BsrDI GCAATG 3 cut(s) 114, 421, 451
BsrI ACTGG 4 cut(s) 51, 361, 632, 1322
BssECI CCNNGG 3 cut(s) 738, 1065, 1263
BssMI GATC 7 cut(s) 23, 167, 198, 217, 256, 586, 809
BssNI GRCGYC 1 cut(s) 407
BssT1I CCWWGG 1 cut(s) 1263
Bst2UI CCWGG 3 cut(s) 978, 1205, 1338
Bst4CI ACNGT 4 cut(s) 989, 1066, 1225, 1282
Bst6I CTCTTC 4 cut(s) 432, 517, 665, 810
BstACI GRCGYC 1 cut(s) 407
BstBAI YACGTR 2 cut(s) 1333, 1349
BstBI TTCGAA 1 cut(s) 899
BstDEI CTNAG 2 cut(s) 572, 636
BstDSI CCRYGG 2 cut(s) 1065, 1263
BstF5I GGATG 3 cut(s) 291, 631, 1321
BstFNI CGCG 2 cut(s) 336, 515
BstHHI GCGC 3 cut(s) 34, 517, 558
BstKTI GATC 7 cut(s) 26, 170, 201, 220, 259, 589, 812
BstMAI GTCTC 1 cut(s) 221
BstMBI GATC 7 cut(s) 23, 167, 198, 217, 256, 586, 809
BstMCI CGRYCG 1 cut(s) 513
BstMWI GCNNNNNNNGC 5 cut(s) 83, 113, 577, 833, 1214
BstNI CCWGG 3 cut(s) 978, 1205, 1338
BstNSI RCATGY 1 cut(s) 404
BstSCI CCNGG 3 cut(s) 976, 1203, 1336
BstSLI GKGCMC 2 cut(s) 1013, 1114
BstSNI TACGTA 1 cut(s) 1333
BstUI CGCG 2 cut(s) 336, 515
BstV1I GCAGC 1 cut(s) 1129
BstV2I GAAGAC 2 cut(s) 740, 1276
BstX2I RGATCY 2 cut(s) 23, 217
BstYI RGATCY 2 cut(s) 23, 217
BstZI CGGCCG 1 cut(s) 510
BsuI GTATCC 1 cut(s) 977
BsuRI GGCC 7 cut(s) 74, 308, 420, 489, 512, 785, 1341
BtgI CCRYGG 2 cut(s) 1065, 1263
BtgZI GCGATG 1 cut(s) 1085
BtsCI GGATG 3 cut(s) 291, 631, 1321
BtsIMutI CAGTG 2 cut(s) 1217, 1230
BveI ACCTGC 1 cut(s) 695
CciNI GCGGCCGC 1 cut(s) 510
CfoI GCGC 3 cut(s) 34, 517, 558
Cfr13I GGNCC 3 cut(s) 274, 721, 1340
CseI GACGC 1 cut(s) 396
CsiI ACCWGGT 1 cut(s) 976
Csp6I GTAC 2 cut(s) 332, 1334
CspCI CAANNNNNGTGG 2 cut(s) 921, 956
CviQI GTAC 2 cut(s) 332, 1334
DdeI CTNAG 2 cut(s) 572, 636
DpnI GATC 7 cut(s) 25, 169, 200, 219, 258, 588, 811
DpnII GATC 7 cut(s) 23, 167, 198, 217, 256, 586, 809
DraI TTTAAA 1 cut(s) 687
EaeI YGGCCR 2 cut(s) 72, 510
EagI CGGCCG 1 cut(s) 510
Eam1104I CTCTTC 4 cut(s) 432, 517, 665, 810
EarI CTCTTC 4 cut(s) 432, 517, 665, 810
EclXI CGGCCG 1 cut(s) 510
Eco105I TACGTA 1 cut(s) 1333
Eco130I CCWWGG 1 cut(s) 1263
Eco24I GRGCYC 1 cut(s) 1299
Eco47I GGWCC 2 cut(s) 274, 721
Eco52I CGGCCG 1 cut(s) 510
Eco57I CTGAAG 2 cut(s) 834, 884
Eco72I CACGTG 1 cut(s) 1349
EcoRII CCWGG 3 cut(s) 976, 1203, 1336
EcoT14I CCWWGG 1 cut(s) 1263
EcoT38I GRGCYC 1 cut(s) 1299
ErhI CCWWGG 1 cut(s) 1263
Esp3I CGTCTC 1 cut(s) 221
FalI AAGNNNNNCTT 2 cut(s) 47, 79
FauNDI CATATG 1 cut(s) 203
Fnu4HI GCNGC 7 cut(s) 75, 306, 510, 513, 828, 1078, 1143
FokI GGATG 3 cut(s) 298, 618, 1328
FriOI GRGCYC 1 cut(s) 1299
Fsp4HI GCNGC 7 cut(s) 75, 306, 510, 513, 828, 1078, 1143
FspBI CTAG 3 cut(s) 224, 842, 1169
GlaI GCGC 3 cut(s) 33, 516, 557
GluI GCNGC 7 cut(s) 75, 306, 510, 513, 828, 1078, 1143
GsuI CTGGAG 1 cut(s) 34
HaeIII GGCC 7 cut(s) 74, 308, 420, 489, 512, 785, 1341
HapII CCGG 1 cut(s) 490
HgaI GACGC 1 cut(s) 396
HhaI GCGC 3 cut(s) 34, 517, 558
Hin1I GRCGYC 1 cut(s) 407
Hin6I GCGC 3 cut(s) 32, 515, 556
HinP1I GCGC 3 cut(s) 32, 515, 556
HincII GTYRAC 1 cut(s) 933
HindII GTYRAC 1 cut(s) 933
HinfI GANTC 5 cut(s) 58, 248, 289, 470, 854
HpaII CCGG 1 cut(s) 490
HphI GGTGA 3 cut(s) 386, 494, 1270
Hpy166II GTNNAC 1 cut(s) 933
Hpy188I TCNGA 6 cut(s) 539, 623, 765, 814, 864, 883
Hpy188III TCNNGA 3 cut(s) 92, 996, 1051
Hpy8I GTNNAC 1 cut(s) 933
HpyAV CCTTC 4 cut(s) 401, 479, 770, 1363
HpyCH4III ACNGT 4 cut(s) 989, 1066, 1225, 1282
HpyCH4IV ACGT 5 cut(s) 935, 953, 1233, 1332, 1348
HpyCH4V TGCA 6 cut(s) 69, 426, 704, 874, 1059, 1217
HpyF10VI GCNNNNNNNGC 5 cut(s) 83, 113, 577, 833, 1214
HpyF3I CTNAG 2 cut(s) 572, 636
HpySE526I ACGT 5 cut(s) 935, 953, 1233, 1332, 1348
Hsp92I GRCGYC 1 cut(s) 407
HspAI GCGC 3 cut(s) 32, 515, 556
Kzo9I GATC 7 cut(s) 23, 167, 198, 217, 256, 586, 809
LguI GCTCTTC 1 cut(s) 810
LmnI GCTCC 4 cut(s) 808, 1085, 1302, 1309
Lsp1109I GCAGC 1 cut(s) 1129
LweI GCATC 3 cut(s) 130, 640, 1257
MabI ACCWGGT 1 cut(s) 976
MaeI CTAG 3 cut(s) 224, 842, 1169
MaeII ACGT 5 cut(s) 935, 953, 1233, 1332, 1348
MaeIII GTNAC 4 cut(s) 317, 342, 374, 1174
MalI GATC 7 cut(s) 25, 169, 200, 219, 258, 588, 811
MboI GATC 7 cut(s) 23, 167, 198, 217, 256, 586, 809
MflI RGATCY 2 cut(s) 23, 217
MhlI GDGCHC 3 cut(s) 1013, 1114, 1299
MluI ACGCGT 1 cut(s) 334
MlyI GAGTC 3 cut(s) 52, 283, 479
MnlI CCTC 9 cut(s) 201, 303, 459, 615, 668, 733, 844, 1204, 1317
MroXI GAANNNNTTC 1 cut(s) 441
MseI TTAA 6 cut(s) 102, 182, 528, 686, 890, 1160
MslI CAYNNNNRTG 2 cut(s) 401, 669
MspA1I CMGCKG 2 cut(s) 77, 254
MspI CCGG 1 cut(s) 490
MspR9I CCNGG 3 cut(s) 978, 1205, 1338
Mva1269I GAATGC 1 cut(s) 34
MvaI CCWGG 3 cut(s) 978, 1205, 1338
MvnI CGCG 2 cut(s) 336, 515
MwoI GCNNNNNNNGC 5 cut(s) 83, 113, 577, 833, 1214
NcoI CCATGG 1 cut(s) 1263
NdeI CATATG 1 cut(s) 203
NdeII GATC 7 cut(s) 23, 167, 198, 217, 256, 586, 809
NlaIV GGNNCC 3 cut(s) 1012, 1081, 1298
NmuCI GTSAC 1 cut(s) 374
NotI GCGGCCGC 1 cut(s) 510
NspI RCATGY 1 cut(s) 404
NspV TTCGAA 1 cut(s) 899
PciI ACATGT 1 cut(s) 400
PciSI GCTCTTC 1 cut(s) 810
PctI GAATGC 1 cut(s) 34
PdmI GAANNNNTTC 1 cut(s) 441
PfeI GAWTC 2 cut(s) 248, 854
PkrI GCNGC 7 cut(s) 76, 307, 511, 514, 829, 1079, 1144
PleI GAGTC 3 cut(s) 52, 283, 478
PmaCI CACGTG 1 cut(s) 1349
PmlI CACGTG 1 cut(s) 1349
PpsI GAGTC 3 cut(s) 52, 283, 478
Ppu21I YACGTR 2 cut(s) 1333, 1349
PscI ACATGT 1 cut(s) 400
Psp1406I AACGTT 2 cut(s) 935, 953
Psp6I CCWGG 3 cut(s) 976, 1203, 1336
PspCI CACGTG 1 cut(s) 1349
PspGI CCWGG 3 cut(s) 976, 1203, 1336
PspN4I GGNNCC 3 cut(s) 1012, 1081, 1298
PspPI GGNCC 3 cut(s) 274, 721, 1340
PsuI RGATCY 2 cut(s) 23, 217
PvuII CAGCTG 1 cut(s) 254
RsaI GTAC 2 cut(s) 333, 1335
RsaNI GTAC 2 cut(s) 332, 1334
RseI CAYNNNNRTG 2 cut(s) 401, 669
SapI GCTCTTC 1 cut(s) 810
SaqAI TTAA 6 cut(s) 102, 182, 528, 686, 890, 1160
SatI GCNGC 7 cut(s) 75, 306, 510, 513, 828, 1078, 1143
Sau3AI GATC 7 cut(s) 23, 167, 198, 217, 256, 586, 809
Sau96I GGNCC 3 cut(s) 274, 721, 1340
SchI GAGTC 3 cut(s) 52, 283, 479
ScrFI CCNGG 3 cut(s) 978, 1205, 1338
SduI GDGCHC 3 cut(s) 1013, 1114, 1299
SexAI ACCWGGT 1 cut(s) 976
SfaNI GCATC 3 cut(s) 130, 640, 1257
SfuI TTCGAA 1 cut(s) 899
SinI GGWCC 2 cut(s) 274, 721
SmiI ATTTAAAT 1 cut(s) 687
SmiMI CAYNNNNRTG 2 cut(s) 401, 669
SmlI CTYRAG 1 cut(s) 463
SmoI CTYRAG 1 cut(s) 463
SnaBI TACGTA 1 cut(s) 1333
SsiI CCGC 7 cut(s) 75, 305, 329, 509, 513, 828, 1077
SspI AATATT 1 cut(s) 496
SspMI CTAG 3 cut(s) 224, 842, 1169
StyD4I CCNGG 3 cut(s) 976, 1203, 1336
StyI CCWWGG 1 cut(s) 1263
SwaI ATTTAAAT 1 cut(s) 687
TaaI ACNGT 4 cut(s) 989, 1066, 1225, 1282
TaiI ACGT 5 cut(s) 938, 956, 1236, 1335, 1351
TaqI TCGA 2 cut(s) 170, 899
TaqII GACCGA 1 cut(s) 752
TauI GCSGC 6 cut(s) 77, 308, 512, 515, 830, 1080
TfiI GAWTC 2 cut(s) 248, 854
Tru1I TTAA 6 cut(s) 102, 182, 528, 686, 890, 1160
Tru9I TTAA 6 cut(s) 102, 182, 528, 686, 890, 1160
TscAI CASTG 2 cut(s) 1224, 1230
TseFI GTSAC 1 cut(s) 374
TseI GCWGC 1 cut(s) 1142
Tsp45I GTSAC 1 cut(s) 374
TspDTI ATGAA 2 cut(s) 491, 1276
TspGWI ACGGA 1 cut(s) 287
TspRI CASTG 2 cut(s) 1224, 1230
VpaK11BI GGWCC 2 cut(s) 274, 721
XapI RAATTY 2 cut(s) 350, 1043
XceI RCATGY 1 cut(s) 404
XmnI GAANNNNTTC 1 cut(s) 441
XspI CTAG 3 cut(s) 224, 842, 1169
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.