Prupe.3G135100_v2.0.a1

Ankyrin repeats (many copies)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
OG0000494
Physical Location & Seq
Reverse (-)
14242453 .. 14246021
3569 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G135100.1

Sequence Viewer

Length: 2229 bp
ATGGCAGACAAAGAGCTGCGTGCAGCCACCAACGAGGACACAGCTGCAAGCATCAGCATAGCTGACGACGAAGATGACGGCGTGGACCTCCGAAGCTTGGCTAGTGATCGGCCTGTGTCCCGCAAAGAAGCAGTGGTCCTCGATCTGCCCATGCACCAAAAAGACGATGGAGGACTCCTTGAGCAAACAGATGGCGATGAAGATTCAAGTGGCTTGCACTTTGTGCGGACCGCTTCGGAAGATGTAGAATTCAGTGAGCAATATGCTAATGCTTTCCATGGGACAAGGGAGAATGCATCAAAGAAATTAACAAAGAAGAAGGTAGTCCACGAAAGGCCCGTTCTTGATGTACCCGTGTACAAAAGAACCGCTGTGGTAGATGTAAAATTCGCAGCGCAACATGTTAATTTTTACCATGGCACTAGGGAGGTACCAACTGCAACAAAACCATCAGAGGAATTCAATCGAGGACTCCTTGAGCAAACAGACGGCGATGAAGATTCTAGTAGCTTGCGCTTGTACCAGCAGTTGTACGGCTACGCAACTCAGGGCAAGATAGATAGCTTTAAGGACACCATTGAAAGGAAGCTTGAGGCAGATGAAGTACATGATCCCAATGCTCGCGTTCGGCTTCTGTCTCGAGTAAGCCCTCATAAGAACACATTCCTTCACATAGCTGCAAATTTCGGCCATGCGAAACTAGCAGCCGAGATCATACACCTTCACAAGCCCCTTTTGTTTGAGAAAAACTTTGAGGGCGACACTGCGCTCCATATTACGGCCAAAACAGGGGATTTAGATACAGCAAGCACTCTTCTCTGTGAAGCCCCAGGCGCTGAAAATGCTGATGAGGTATTCATGTTGCTGACCTCAATAAATGATGAGCAAAACACTCCCTTGCACGAGGCCCTGATTCATGGTCACCAATCAGTAGCAAAGTGTTTCATAGAGGCCTATCCTGCCTTTTCGTTTTATCTCAATAAGGAAGCAAAGTCCTCTTTGTATCTGGCCGCTGAGGAAGGGTTTGATGAGATCGTGAAACTAATAAACAAAAAAGCAGTTGAGAAAAAGCCAGAAGTTCGTGTTAATGGCAAGTCTCCGTTGCATGCTGCAATTCTAAGCCGCCGGAACAATGGTATAAGGGGTTCGCTTCTTATTAGGCAGACGCGCATCTGTGATTCTCATCAAATGGATCATGGCGGCAACTTTCCAATCCATTCAGCATCAAGCAAAGGTCATGTCAAGATTGTTAAAGAGCTGCTTCGACATTGTCCCGATTCAAAGGAACTGAAAAACTCTAATGGCGAAAATATACTCCATGTTGCAGCAAGATGCGGTAAAGACAATCTTGTCAAATATTTTCTCAAAAAGGGTGAGTTTCGAATGTTGGTAAACCAAAAAGACAGGAACGGAAATACTCCTTTACATTTGGCAACGATGCACCACCACCCCAAGGTTGTCTACAGATTGGCTTGGGATACAAGGACAAACTTAAAGCTCTTGAATGATAGGCACATGACAGCTCTTGACATTACAGAAAGCACTTTGGAAACTATTGCATCATATCATGGGAGGCTTACTTGGACGGTATTGAAATCTGCTTTCGCACAGCGAGCTCAGAGTTTGCATGTCCTCCAAAGAAAAAAACAGAGATCGCCACAAGTAGCAGACAATGGTGGAGGTTCGACTGACTTGAAGTTACCAAACGAGGAAAGCATTAGGGACAGGGTGAATACTCTATTGGTGGTTACCACACTTGTTGCCACAATGGCATTTGCAGCCGGTTTCACAATGCCAGGTGGAAACAACGGTGACGCCCCTCAAGAGGGCATGGCAATCTTGCTAACCAACGCTATGTTCCAAGCCTTTGTGATTTGTAACACCATAGCTATGTATACTGCCATCCTTGTTGCAGTCTGTCTCATTTGGGCGCAGTTGGGGGACTTAAATTTGGTGGATATAGCTCTCCGTCTGGCATTGCCGCTGTTGGGGATTGCGCTTACCATGATTTCCTTAGCCTTCATGGCTGGGGTTTATGTGGTAGTTAGCAATCTTCATTGGCTTGCCTATGTTGTATTGATCCTGGGAGTCCTTTTCATTTTCACTGTCTTAGTAGTTTTCACTCCACTCTTTTGCAAAACTACTTCTGGGTCCCGCATCTTTCGTTGGATCACTTATTTTCTCTTCTGTGTGGAAGTATGGGCTTCTGGAAGTCACAACGATGACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04310 map04310
Pfam Domains
Protein Families
Ank Ank_2 Ank_4 PGG

Protein Analysis

743

Amino Acids

82.45

Weight (kDa)

6.48

Isoelectric Point (pI)

33.35

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000494)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G03670 AT4G03440 AT4G03440 AT4G03440 AT4G03450 AT4G03450 AT4G03460 AT4G03460 AT4G03470 AT4G03480 AT4G03480 AT4G03490 AT4G03490 AT4G03490 AT4G03490 AT4G03490 AT4G03500 AT4G03500 AT4G03500 AT4G03505 AT4G05040 AT4G05040 AT4G05040 AT4G05040 AT4G05040 AT4G05040 AT4G05040 AT4G14390 AT4G14390 AT4G14390 AT4G14390 AT4G14400 AT4G14400 AT4G14400
fragaria_vesca FvH4_3g05910 FvH4_3g23320
malus_domestica MD03G1094000.v1.1 MD03G1094200.v1.1 MD03G1094600.v1.1 MD12G1218700.v1.1
prunus_persica Prupe.3G135100_v2.0.a1 Prupe.3G135200_v2.0.a1 Prupe.3G135700_v2.0.a1 Prupe.3G135700_v2.0.a1 Prupe.3G142400_v2.0.a1 Prupe.3G153800_v2.0.a1 Prupe.3G153800_v2.0.a1 Prupe.3G153800_v2.0.a1 Prupe.3G153800_v2.0.a1 Prupe.3G154000_v2.0.a1 Prupe.3G154200_v2.0.a1 Prupe.3G154200_v2.0.a1 Prupe.3G154600_v2.0.a1 Prupe.3G154700_v2.0.a1 Prupe.3G155200_v2.0.a1 Prupe.3G155300_v2.0.a1 Prupe.8G110300_v2.0.a1
pyrus_communis pycom03g07280 pycom03g07580 pycom03g07660 pycom03g07700 pycom03g07710
rosa_chinensis RchiOBHm_Chr3g0461161 RchiOBHm_Chr5g0041111
rosa_laevigata RLG00000023472 RLG00000023475 RLG00000034025
rosa_multiflora Rmu_co8126040.1_g000001 Rmu_co8268563.1_g000001 Rmu_sc0000964.1_g000014 Rmu_sc0028923.1_g000001 Rmu_sc0042194.1_g000001
rosa_roxburghii Rroxscaffold_1G00039610 Rroxscaffold_6G00401360
rosa_rugosa Rorug03G0048600 Rorug03G0048700 Rorug05G0190000
rosa_samantha Rh3AG105900 Rh3BG110200 Rh3BG268400 Rh3CG111800 Rh3DG111900 Rh5AG275800 Rh5BG280500 Rh5CG312600 Rh5DG288800
rosa_wichuraiana Rw3G009080 Rw5G025920

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1349
Acc65I GGTACC 1 cut(s) 430
AccB1I GGYRCC 1 cut(s) 430
AccI GTMKAC 2 cut(s) 1461, 1895
AccII CGCG 2 cut(s) 624, 1168
AclWI GGATC 4 cut(s) 605, 1200, 2074, 2177
AcoI YGGCCR 3 cut(s) 688, 780, 1008
AcsI RAATTY 5 cut(s) 248, 386, 458, 682, 1948
AcyI GRCGYC 1 cut(s) 1815
AdeI CACNNNGTG 1 cut(s) 223
AfaI GTAC 6 cut(s) 351, 359, 432, 521, 533, 606
AfiI CCNNNNNNNGG 8 cut(s) 97, 582, 778, 789, 1453, 1825, 1826, 1988
AflIII ACRYGT 1 cut(s) 400
AgsI TTSAA 7 cut(s) 207, 463, 581, 1281, 1504, 1594, 1696
AjnI CCWGG 3 cut(s) 829, 1795, 2082
AjuI GAANNNNNNNTTGG 4 cut(s) 1724, 1756, 1841, 1873
Alw21I GWGCWC 1 cut(s) 1618
Alw26I GTCTC 3 cut(s) 642, 1101, 1925
AlwI GGATC 4 cut(s) 605, 1200, 2074, 2177
AlwNI CAGNNNCTG 1 cut(s) 836
Ama87I CYCGRG 1 cut(s) 639
AoxI GGCC 7 cut(s) 110, 335, 688, 780, 906, 951, 1008
ApoI RAATTY 5 cut(s) 248, 386, 458, 682, 1948
ArsI GACNNNNNNTTYG 2 cut(s) 1224, 1256
Asp700I GAANNNNTTC 1 cut(s) 662
Asp718I GGTACC 1 cut(s) 430
AspLEI GCGC 7 cut(s) 397, 516, 769, 836, 1170, 1933, 1999
AspS9I GGNCC 6 cut(s) 85, 136, 228, 336, 907, 2151
AsuHPI GGTGA 4 cut(s) 914, 1385, 1741, 1823
AsuII TTCGAA 1 cut(s) 1381
AvaI CYCGRG 1 cut(s) 639
AvaII GGWCC 4 cut(s) 85, 136, 228, 2151
BanI GGYRCC 1 cut(s) 430
BanII GRGCYC 1 cut(s) 1618
BauI CACGAG 1 cut(s) 902
Bbv12I GWGCWC 1 cut(s) 1618
BbvCI CCTCAGC 1 cut(s) 1014
BccI CCATC 4 cut(s) 161, 185, 457, 1910
BceAI ACGGC 4 cut(s) 94, 505, 550, 795
BciT130I CCWGG 3 cut(s) 831, 1797, 2084
BciVI GTATCC 1 cut(s) 1471
BcoDI GTCTC 3 cut(s) 642, 1101, 1925
BfaI CTAG 4 cut(s) 102, 423, 504, 701
BfmI CTRYAG 1 cut(s) 1462
BfoI RGCGCY 1 cut(s) 837
BfuI GTATCC 1 cut(s) 1471
BglI GCCNNNNNGGC 2 cut(s) 1769, 2024
Bme1390I CCNGG 3 cut(s) 831, 1797, 2084
Bme18I GGWCC 4 cut(s) 85, 136, 228, 2151
BmeT110I CYCGRG 1 cut(s) 639
BmgT120I GGNCC 6 cut(s) 85, 136, 228, 336, 907, 2151
BmiI GGNNCC 3 cut(s) 432, 2152, 2153
BmrFI CCNGG 3 cut(s) 831, 1797, 2084
BmsI GCATC 8 cut(s) 60, 305, 1179, 1232, 1322, 1428, 1568, 2166
Bpu10I CCTNAGC 2 cut(s) 1014, 2014
Bpu14I TTCGAA 1 cut(s) 1381
BpuEI CTTGAG 4 cut(s) 200, 497, 611, 1806
BsaBI GATNNNNATC 1 cut(s) 1182
BsaHI GRCGYC 1 cut(s) 1815
BsaJI CCNNGG 5 cut(s) 277, 415, 829, 1452, 2083
Bsc4I CCNNNNNNNGG 8 cut(s) 97, 582, 778, 789, 1453, 1825, 1826, 1988
Bse118I RCCGGY 1 cut(s) 1781
Bse3DI GCAATG 1 cut(s) 1976
Bse8I GATNNNNATC 1 cut(s) 1182
BseBI CCWGG 3 cut(s) 831, 1797, 2084
BseDI CCNNGG 5 cut(s) 277, 415, 829, 1452, 2083
BseGI GGATG 1 cut(s) 1902
BseJI GATNNNNATC 1 cut(s) 1182
BseLI CCNNNNNNNGG 8 cut(s) 97, 582, 778, 789, 1453, 1825, 1826, 1988
BseMI GCAATG 1 cut(s) 1976
BseMII CTCAG 3 cut(s) 560, 1005, 1631
BseYI CCCAGC 1 cut(s) 2027
BsgI GTGCAG 1 cut(s) 42
Bsh1236I CGCG 2 cut(s) 624, 1168
BshFI GGCC 7 cut(s) 112, 337, 690, 782, 908, 953, 1010
BshNI GGYRCC 1 cut(s) 430
BsiHKAI GWGCWC 1 cut(s) 1618
BsiHKCI CYCGRG 1 cut(s) 639
BsiSI CCGG 2 cut(s) 1126, 1782
BslFI GGGAC 6 cut(s) 103, 295, 1257, 1736, 1955, 2137
BslI CCNNNNNNNGG 8 cut(s) 97, 582, 778, 789, 1453, 1825, 1826, 1988
BsmAI GTCTC 3 cut(s) 642, 1101, 1925
BsmFI GGGAC 6 cut(s) 103, 295, 1257, 1736, 1955, 2137
BsmI GAATGC 1 cut(s) 298
BsnI GGCC 7 cut(s) 112, 337, 690, 782, 908, 953, 1010
BsoBI CYCGRG 1 cut(s) 639
Bsp119I TTCGAA 1 cut(s) 1381
Bsp1286I GDGCHC 1 cut(s) 1618
Bsp1407I TGTACA 1 cut(s) 357
Bsp143I GATC 9 cut(s) 106, 142, 610, 711, 1032, 1192, 1652, 2079, 2169
Bsp19I CCATGG 2 cut(s) 277, 415
BspANI GGCC 7 cut(s) 112, 337, 690, 782, 908, 953, 1010
BspCNI CTCAG 3 cut(s) 559, 1006, 1630
BspFNI CGCG 2 cut(s) 624, 1168
BspLI GGNNCC 3 cut(s) 432, 2152, 2153
BspPI GGATC 4 cut(s) 605, 1200, 2074, 2177
BspT104I TTCGAA 1 cut(s) 1381
BspT107I GGYRCC 1 cut(s) 430
BsrDI GCAATG 1 cut(s) 1976
BsrFI RCCGGY 1 cut(s) 1781
BsrGI TGTACA 1 cut(s) 357
BssAI RCCGGY 1 cut(s) 1781
BssECI CCNNGG 5 cut(s) 277, 415, 829, 1452, 2083
BssMI GATC 9 cut(s) 106, 142, 610, 711, 1032, 1192, 1652, 2079, 2169
BssNAI GTATAC 1 cut(s) 1896
BssNI GRCGYC 1 cut(s) 1815
BssSI CACGAG 1 cut(s) 902
BssT1I CCWWGG 3 cut(s) 277, 415, 1452
Bst1107I GTATAC 1 cut(s) 1896
Bst2BI CACGAG 1 cut(s) 902
Bst2UI CCWGG 3 cut(s) 831, 1797, 2084
Bst4CI ACNGT 3 cut(s) 1588, 1811, 2107
Bst6I CTCTTC 2 cut(s) 819, 2189
BstACI GRCGYC 1 cut(s) 1815
BstAPI GCANNNNNTGC 1 cut(s) 223
BstAUI TGTACA 1 cut(s) 357
BstBI TTCGAA 1 cut(s) 1381
BstC8I GCNNGC 9 cut(s) 21, 49, 215, 512, 622, 808, 1107, 1614, 2064
BstDEI CTNAG 6 cut(s) 546, 1014, 1118, 1617, 2014, 2110
BstDSI CCRYGG 2 cut(s) 277, 415
BstEII GGTNACC 2 cut(s) 920, 1747
BstF5I GGATG 1 cut(s) 1902
BstFNI CGCG 2 cut(s) 624, 1168
BstH2I RGCGCY 1 cut(s) 837
BstHHI GCGC 7 cut(s) 397, 516, 769, 836, 1170, 1933, 1999
BstKTI GATC 9 cut(s) 109, 145, 613, 714, 1035, 1195, 1655, 2082, 2172
BstMAI GTCTC 3 cut(s) 642, 1101, 1925
BstMBI GATC 9 cut(s) 106, 142, 610, 711, 1032, 1192, 1652, 2079, 2169
BstMWI GCNNNNNNNGC 9 cut(s) 223, 701, 833, 842, 959, 1613, 1769, 1778, 2024
BstNI CCWGG 3 cut(s) 831, 1797, 2084
BstNSI RCATGY 3 cut(s) 404, 1109, 1631
BstPI GGTNACC 2 cut(s) 920, 1747
BstSCI CCNGG 3 cut(s) 829, 1795, 2082
BstSFI CTRYAG 1 cut(s) 1462
BstUI CGCG 2 cut(s) 624, 1168
BstZ17I GTATAC 1 cut(s) 1896
BsuI GTATCC 1 cut(s) 1471
BsuRI GGCC 7 cut(s) 112, 337, 690, 782, 908, 953, 1010
BtgI CCRYGG 2 cut(s) 277, 415
BtgZI GCGATG 2 cut(s) 210, 507
BtsCI GGATG 1 cut(s) 1902
BtsI GCAGTG 2 cut(s) 138, 762
BtsIMutI CAGTG 4 cut(s) 138, 259, 762, 2103
Cac8I GCNNGC 9 cut(s) 21, 49, 215, 512, 622, 808, 1107, 1614, 2064
CaiI CAGNNNCTG 1 cut(s) 836
CfoI GCGC 7 cut(s) 397, 516, 769, 836, 1170, 1933, 1999
Cfr10I RCCGGY 1 cut(s) 1781
Cfr13I GGNCC 6 cut(s) 85, 136, 228, 336, 907, 2151
CpoI CGGWCCG 1 cut(s) 228
CseI GACGC 2 cut(s) 1174, 1823
Csp6I GTAC 6 cut(s) 350, 358, 431, 520, 532, 605
CspCI CAANNNNNGTGG 2 cut(s) 1741, 1776
CspI CGGWCCG 1 cut(s) 228
CviQI GTAC 6 cut(s) 350, 358, 431, 520, 532, 605
DdeI CTNAG 6 cut(s) 546, 1014, 1118, 1617, 2014, 2110
DpnI GATC 9 cut(s) 108, 144, 612, 713, 1034, 1194, 1654, 2081, 2171
DpnII GATC 9 cut(s) 106, 142, 610, 711, 1032, 1192, 1652, 2079, 2169
DraIII CACNNNGTG 1 cut(s) 223
DrdI GACNNNNNNGTC 1 cut(s) 1349
DseDI GACNNNNNNGTC 1 cut(s) 1349
EaeI YGGCCR 3 cut(s) 688, 780, 1008
Eam1104I CTCTTC 2 cut(s) 819, 2189
EarI CTCTTC 2 cut(s) 819, 2189
Ecl136II GAGCTC 1 cut(s) 1616
Eco130I CCWWGG 3 cut(s) 277, 415, 1452
Eco147I AGGCCT 1 cut(s) 953
Eco24I GRGCYC 1 cut(s) 1618
Eco47I GGWCC 4 cut(s) 85, 136, 228, 2151
Eco53kI GAGCTC 1 cut(s) 1616
Eco88I CYCGRG 1 cut(s) 639
Eco91I GGTNACC 2 cut(s) 920, 1747
EcoICRI GAGCTC 1 cut(s) 1616
EcoO109I RGGNCCY 2 cut(s) 907, 2151
EcoO65I GGTNACC 2 cut(s) 920, 1747
EcoRI GAATTC 2 cut(s) 248, 458
EcoRII CCWGG 3 cut(s) 829, 1795, 2082
EcoT14I CCWWGG 3 cut(s) 277, 415, 1452
EcoT22I ATGCAT 1 cut(s) 298
EcoT38I GRGCYC 1 cut(s) 1618
ErhI CCWWGG 3 cut(s) 277, 415, 1452
FalI AAGNNNNNCTT 4 cut(s) 1245, 1277, 1332, 1364
FaqI GGGAC 6 cut(s) 103, 295, 1257, 1736, 1955, 2137
FauI CCCGC 2 cut(s) 128, 2162
FblI GTMKAC 2 cut(s) 1461, 1895
FokI GGATG 1 cut(s) 1889
FriOI GRGCYC 1 cut(s) 1618
FspBI CTAG 4 cut(s) 102, 423, 504, 701
GlaI GCGC 7 cut(s) 396, 515, 768, 835, 1169, 1932, 1998
GsaI CCCAGC 1 cut(s) 2031
HaeII RGCGCY 1 cut(s) 837
HaeIII GGCC 7 cut(s) 112, 337, 690, 782, 908, 953, 1010
HapII CCGG 2 cut(s) 1126, 1782
HgaI GACGC 2 cut(s) 1174, 1823
HhaI GCGC 7 cut(s) 397, 516, 769, 836, 1170, 1933, 1999
Hin1I GRCGYC 1 cut(s) 1815
Hin6I GCGC 7 cut(s) 395, 514, 767, 834, 1168, 1931, 1997
HinP1I GCGC 7 cut(s) 395, 514, 767, 834, 1168, 1931, 1997
HindIII AAGCTT 2 cut(s) 94, 587
HinfI GANTC 8 cut(s) 174, 203, 471, 500, 913, 1178, 1277, 2088
HpaII CCGG 2 cut(s) 1126, 1782
HphI GGTGA 4 cut(s) 914, 1385, 1741, 1823
Hpy166II GTNNAC 6 cut(s) 85, 328, 358, 1393, 1462, 1896
Hpy188I TCNGA 4 cut(s) 92, 238, 454, 1620
Hpy188III TCNNGA 9 cut(s) 344, 639, 1036, 1243, 1274, 1501, 1526, 1823, 2208
Hpy8I GTNNAC 6 cut(s) 85, 328, 358, 1393, 1462, 1896
Hpy99I CGWCG 1 cut(s) 71
HpyAV CCTTC 5 cut(s) 313, 677, 731, 1013, 2029
HpyCH4III ACNGT 3 cut(s) 1588, 1811, 2107
HpyF10VI GCNNNNNNNGC 9 cut(s) 223, 701, 833, 842, 959, 1613, 1769, 1778, 2024
HpyF3I CTNAG 6 cut(s) 546, 1014, 1118, 1617, 2014, 2110
Hsp92I GRCGYC 1 cut(s) 1815
HspAI GCGC 7 cut(s) 395, 514, 767, 834, 1168, 1931, 1997
KflI GGGWCCC 1 cut(s) 2151
KpnI GGTACC 1 cut(s) 434
Kzo9I GATC 9 cut(s) 106, 142, 610, 711, 1032, 1192, 1652, 2079, 2169
LmnI GCTCC 1 cut(s) 774
LweI GCATC 8 cut(s) 60, 305, 1179, 1232, 1322, 1428, 1568, 2166
MaeI CTAG 4 cut(s) 102, 423, 504, 701
MaeIII GTNAC 6 cut(s) 920, 1698, 1747, 1811, 1877, 2213
MalI GATC 9 cut(s) 108, 144, 612, 713, 1034, 1194, 1654, 2081, 2171
MboI GATC 9 cut(s) 106, 142, 610, 711, 1032, 1192, 1652, 2079, 2169
MboII GAAGA 8 cut(s) 83, 212, 251, 328, 509, 806, 2045, 2176
MhlI GDGCHC 1 cut(s) 1618
MluCI AATT 8 cut(s) 248, 305, 386, 406, 458, 682, 1113, 1948
MlyI GAGTC 3 cut(s) 168, 465, 2097
MmeI TCCRAC 1 cut(s) 2147
Mph1103I ATGCAT 1 cut(s) 298
MroXI GAANNNNTTC 1 cut(s) 662
MseI TTAA 7 cut(s) 308, 405, 567, 1086, 1251, 1493, 1946
MslI CAYNNNNRTG 2 cut(s) 1889, 2220
MspA1I CMGCKG 4 cut(s) 44, 371, 1013, 1984
MspI CCGG 2 cut(s) 1126, 1782
MspR9I CCNGG 3 cut(s) 831, 1797, 2084
Mva1269I GAATGC 1 cut(s) 298
MvaI CCWGG 3 cut(s) 831, 1797, 2084
MvnI CGCG 2 cut(s) 624, 1168
MwoI GCNNNNNNNGC 9 cut(s) 223, 701, 833, 842, 959, 1613, 1769, 1778, 2024
NcoI CCATGG 2 cut(s) 277, 415
NdeII GATC 9 cut(s) 106, 142, 610, 711, 1032, 1192, 1652, 2079, 2169
NlaIV GGNNCC 3 cut(s) 432, 2152, 2153
NmeAIII GCCGAG 1 cut(s) 733
NmuCI GTSAC 3 cut(s) 920, 1811, 2213
NsiI ATGCAT 1 cut(s) 298
NspI RCATGY 3 cut(s) 404, 1109, 1631
NspV TTCGAA 1 cut(s) 1381
PaeI GCATGC 1 cut(s) 1109
PaeR7I CTCGAG 1 cut(s) 639
PceI AGGCCT 1 cut(s) 953
PciI ACATGT 1 cut(s) 400
PcsI WCGNNNNNNNCGW 1 cut(s) 336
PctI GAATGC 1 cut(s) 298
PdmI GAANNNNTTC 1 cut(s) 662
PfeI GAWTC 5 cut(s) 203, 500, 913, 1178, 1277
PflFI GACNNNGTC 1 cut(s) 1269
PleI GAGTC 3 cut(s) 168, 465, 2096
PpsI GAGTC 3 cut(s) 168, 465, 2096
PpuMI RGGWCCY 1 cut(s) 2151
PscI ACATGT 1 cut(s) 400
Psp124BI GAGCTC 1 cut(s) 1618
Psp5II RGGWCCY 1 cut(s) 2151
Psp6I CCWGG 3 cut(s) 829, 1795, 2082
PspEI GGTNACC 2 cut(s) 920, 1747
PspFI CCCAGC 1 cut(s) 2027
PspGI CCWGG 3 cut(s) 829, 1795, 2082
PspN4I GGNNCC 3 cut(s) 432, 2152, 2153
PspPI GGNCC 6 cut(s) 85, 136, 228, 336, 907, 2151
PspPPI RGGWCCY 1 cut(s) 2151
PsrI GAACNNNNNNTAC 2 cut(s) 1129, 1161
PstNI CAGNNNCTG 1 cut(s) 836
PsyI GACNNNGTC 1 cut(s) 1269
PvuII CAGCTG 1 cut(s) 44
RsaI GTAC 6 cut(s) 351, 359, 432, 521, 533, 606
RsaNI GTAC 6 cut(s) 350, 358, 431, 520, 532, 605
RseI CAYNNNNRTG 2 cut(s) 1889, 2220
Rsr2I CGGWCCG 1 cut(s) 228
RsrII CGGWCCG 1 cut(s) 228
SacI GAGCTC 1 cut(s) 1618
SaqAI TTAA 7 cut(s) 308, 405, 567, 1086, 1251, 1493, 1946
Sau3AI GATC 9 cut(s) 106, 142, 610, 711, 1032, 1192, 1652, 2079, 2169
Sau96I GGNCC 6 cut(s) 85, 136, 228, 336, 907, 2151
SchI GAGTC 3 cut(s) 168, 465, 2097
ScrFI CCNGG 3 cut(s) 831, 1797, 2084
SduI GDGCHC 1 cut(s) 1618
SfaNI GCATC 8 cut(s) 60, 305, 1179, 1232, 1322, 1428, 1568, 2166
SfcI CTRYAG 1 cut(s) 1462
Sfr274I CTCGAG 1 cut(s) 639
SfuI TTCGAA 1 cut(s) 1381
SinI GGWCC 4 cut(s) 85, 136, 228, 2151
SlaI CTCGAG 1 cut(s) 639
SmiMI CAYNNNNRTG 2 cut(s) 1889, 2220
SmlI CTYRAG 5 cut(s) 179, 476, 590, 639, 1821
SmoI CTYRAG 5 cut(s) 179, 476, 590, 639, 1821
SphI GCATGC 1 cut(s) 1109
Sse9I AATT 8 cut(s) 248, 305, 386, 406, 458, 682, 1113, 1948
SseBI AGGCCT 1 cut(s) 953
SspI AATATT 1 cut(s) 1358
SspMI CTAG 4 cut(s) 102, 423, 504, 701
SstI GAGCTC 1 cut(s) 1618
StuI AGGCCT 1 cut(s) 953
StyD4I CCNGG 3 cut(s) 829, 1795, 2082
StyI CCWWGG 3 cut(s) 277, 415, 1452
TaaI ACNGT 3 cut(s) 1588, 1811, 2107
TaqI TCGA 6 cut(s) 141, 466, 640, 1264, 1381, 1685
TasI AATT 8 cut(s) 248, 305, 386, 406, 458, 682, 1113, 1948
TatI WGTACW 2 cut(s) 357, 604
TauI GCSGC 4 cut(s) 1013, 1125, 1203, 1984
TfiI GAWTC 5 cut(s) 203, 500, 913, 1178, 1277
Tru1I TTAA 7 cut(s) 308, 405, 567, 1086, 1251, 1493, 1946
Tru9I TTAA 7 cut(s) 308, 405, 567, 1086, 1251, 1493, 1946
TscAI CASTG 4 cut(s) 138, 259, 769, 2110
TseFI GTSAC 3 cut(s) 920, 1811, 2213
Tsp45I GTSAC 3 cut(s) 920, 1811, 2213
TspDTI ATGAA 9 cut(s) 213, 510, 615, 847, 905, 934, 2011, 2045, 2086
TspGWI ACGGA 3 cut(s) 1089, 1425, 1958
TspRI CASTG 4 cut(s) 138, 259, 769, 2110
Tth111I GACNNNGTC 1 cut(s) 1269
VpaK11BI GGWCC 4 cut(s) 85, 136, 228, 2151
XapI RAATTY 5 cut(s) 248, 386, 458, 682, 1948
XceI RCATGY 3 cut(s) 404, 1109, 1631
XcmI CCANNNNNNNNNTGG 1 cut(s) 164
XhoI CTCGAG 1 cut(s) 639
XmiI GTMKAC 2 cut(s) 1461, 1895
XmnI GAANNNNTTC 1 cut(s) 662
XspI CTAG 4 cut(s) 102, 423, 504, 701
Zsp2I ATGCAT 1 cut(s) 298
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.