Prupe.3G154600_v2.0.a1

ankyrin repeat-containing protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
Physical Location & Seq
Forward (+)
17057784 .. 17058459
676 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G154600.1

Sequence Viewer

Length: 489 bp
ATGGAAGAAAATATTTTGAACTCAAAAGATGAGAAAGGGAGGACTCCACTACATTGTGCAGCATCAATTGGCAAACGTCTCGTGGATTCTCATCGAAACGATCATTGTGAGAACTTTCCGATCCATTGTGCATCAAGCAAATGTCATGTCGACATTATTAAAGAGCTGCTTCAACATTGTCTCGATTCAATGGAATTGAGGAACTCAAGTGACCAAAATATACTCCATGTTGCAGCAAGATGTGGCGAGGACAATCTTGTCAAATATTTTCTCAAGAAGGTTGAGTTTCAAATGTTGATCAACCAAAAAGACAACAGAGGAAATACTCCTTTGCACTTGGCAAAGATGTACCATCATCCCAAGGTTGTCGAGCTTTTCACTTTCGATAGAAGGACCAACTTAAAGGTCTTGAATGATAGGGGCATGACATCTCTTGACATTAGAGAAAGAGCTTTGGAAACTAGTGCATCATATCATGGGGAACTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

163

Amino Acids

18.69

Weight (kDa)

7.17

Isoelectric Point (pI)

34.14

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000494)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G03670 AT4G03440 AT4G03440 AT4G03440 AT4G03450 AT4G03450 AT4G03460 AT4G03460 AT4G03470 AT4G03480 AT4G03480 AT4G03490 AT4G03490 AT4G03490 AT4G03490 AT4G03490 AT4G03500 AT4G03500 AT4G03500 AT4G03505 AT4G05040 AT4G05040 AT4G05040 AT4G05040 AT4G05040 AT4G05040 AT4G05040 AT4G14390 AT4G14390 AT4G14390 AT4G14390 AT4G14400 AT4G14400 AT4G14400
fragaria_vesca FvH4_3g05910 FvH4_3g23320
malus_domestica MD03G1094000.v1.1 MD03G1094200.v1.1 MD03G1094600.v1.1 MD12G1218700.v1.1
prunus_persica Prupe.3G135100_v2.0.a1 Prupe.3G135200_v2.0.a1 Prupe.3G135700_v2.0.a1 Prupe.3G135700_v2.0.a1 Prupe.3G142400_v2.0.a1 Prupe.3G153800_v2.0.a1 Prupe.3G153800_v2.0.a1 Prupe.3G153800_v2.0.a1 Prupe.3G153800_v2.0.a1 Prupe.3G154000_v2.0.a1 Prupe.3G154200_v2.0.a1 Prupe.3G154200_v2.0.a1 Prupe.3G154600_v2.0.a1 Prupe.3G154700_v2.0.a1 Prupe.3G155200_v2.0.a1 Prupe.3G155300_v2.0.a1 Prupe.8G110300_v2.0.a1
pyrus_communis pycom03g07280 pycom03g07580 pycom03g07660 pycom03g07700 pycom03g07710
rosa_chinensis RchiOBHm_Chr3g0461161 RchiOBHm_Chr5g0041111
rosa_laevigata RLG00000023472 RLG00000023475 RLG00000034025
rosa_multiflora Rmu_co8126040.1_g000001 Rmu_co8268563.1_g000001 Rmu_sc0000964.1_g000014 Rmu_sc0028923.1_g000001 Rmu_sc0042194.1_g000001
rosa_roxburghii Rroxscaffold_1G00039610 Rroxscaffold_6G00401360
rosa_rugosa Rorug03G0048600 Rorug03G0048700 Rorug05G0190000
rosa_samantha Rh3AG105900 Rh3BG110200 Rh3BG268400 Rh3CG111800 Rh3DG111900 Rh5AG275800 Rh5BG280500 Rh5CG312600 Rh5DG288800
rosa_wichuraiana Rw3G009080 Rw5G025920

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 257
AccI GTMKAC 1 cut(s) 150
AclWI GGATC 1 cut(s) 115
AfaI GTAC 1 cut(s) 350
AgsI TTSAA 5 cut(s) 19, 173, 189, 290, 412
AhlI ACTAGT 1 cut(s) 461
AluBI AGCT 3 cut(s) 166, 373, 452
AluI AGCT 3 cut(s) 166, 373, 452
Alw26I GTCTC 2 cut(s) 83, 185
AlwI GGATC 1 cut(s) 115
ApeKI GCWGC 3 cut(s) 59, 166, 233
ArsI GACNNNNNNTTYG 2 cut(s) 132, 164
AspS9I GGNCC 1 cut(s) 393
AvaII GGWCC 1 cut(s) 393
BauI CACGAG 1 cut(s) 80
BbvI GCAGC 3 cut(s) 71, 153, 245
BccI CCATC 1 cut(s) 360
BcgI CGANNNNNNTGC 2 cut(s) 61, 95
BclI TGATCA 1 cut(s) 297
BcoDI GTCTC 2 cut(s) 83, 185
BcuI ACTAGT 1 cut(s) 461
BfaI CTAG 1 cut(s) 462
BisI GCNGC 3 cut(s) 60, 167, 234
BlsI GCNGC 3 cut(s) 61, 168, 235
Bme18I GGWCC 1 cut(s) 393
BmgT120I GGNCC 1 cut(s) 393
BmsI GCATC 3 cut(s) 71, 140, 476
BpuEI CTTGAG 2 cut(s) 190, 257
BsaBI GATNNNNATC 1 cut(s) 90
BsaJI CCNNGG 1 cut(s) 360
Bse8I GATNNNNATC 1 cut(s) 90
BseDI CCNNGG 1 cut(s) 360
BseGI GGATG 1 cut(s) 355
BseJI GATNNNNATC 1 cut(s) 90
BseXI GCAGC 3 cut(s) 71, 153, 245
BsgI GTGCAG 1 cut(s) 78
BsmAI GTCTC 2 cut(s) 83, 185
BsmBI CGTCTC 1 cut(s) 83
Bsp143I GATC 3 cut(s) 100, 120, 297
BspPI GGATC 1 cut(s) 115
BssECI CCNNGG 1 cut(s) 360
BssMI GATC 3 cut(s) 100, 120, 297
BssSI CACGAG 1 cut(s) 80
BssT1I CCWWGG 1 cut(s) 360
Bst2BI CACGAG 1 cut(s) 80
BstF5I GGATG 1 cut(s) 355
BstKTI GATC 3 cut(s) 103, 123, 300
BstMAI GTCTC 2 cut(s) 83, 185
BstMBI GATC 3 cut(s) 100, 120, 297
BstV1I GCAGC 3 cut(s) 71, 153, 245
BtsCI GGATG 1 cut(s) 355
Cfr13I GGNCC 1 cut(s) 393
Csp6I GTAC 1 cut(s) 349
CviAII CATG 4 cut(s) 146, 227, 424, 476
CviJI RGCY 3 cut(s) 166, 373, 452
CviKI_1 RGCY 3 cut(s) 166, 373, 452
CviQI GTAC 1 cut(s) 349
DpnI GATC 3 cut(s) 102, 122, 299
DpnII GATC 3 cut(s) 100, 120, 297
DrdI GACNNNNNNGTC 1 cut(s) 257
DseDI GACNNNNNNGTC 1 cut(s) 257
Eco130I CCWWGG 1 cut(s) 360
Eco47I GGWCC 1 cut(s) 393
EcoT14I CCWWGG 1 cut(s) 360
ErhI CCWWGG 1 cut(s) 360
Esp3I CGTCTC 1 cut(s) 83
FaeI CATG 4 cut(s) 149, 230, 427, 479
FaiI YATR 6 cut(s) 147, 221, 228, 425, 472, 477
FalI AAGNNNNNCTT 2 cut(s) 153, 185
FatI CATG 4 cut(s) 145, 226, 423, 475
FbaI TGATCA 1 cut(s) 297
FblI GTMKAC 1 cut(s) 150
Fnu4HI GCNGC 3 cut(s) 60, 167, 234
FokI GGATG 1 cut(s) 342
Fsp4HI GCNGC 3 cut(s) 60, 167, 234
FspBI CTAG 1 cut(s) 462
GluI GCNGC 3 cut(s) 60, 167, 234
Hin1II CATG 4 cut(s) 149, 230, 427, 479
HincII GTYRAC 1 cut(s) 151
HindII GTYRAC 1 cut(s) 151
HinfI GANTC 3 cut(s) 43, 86, 185
Hpy166II GTNNAC 1 cut(s) 151
Hpy188I TCNGA 1 cut(s) 120
Hpy188III TCNNGA 4 cut(s) 182, 274, 409, 434
Hpy8I GTNNAC 1 cut(s) 151
HpyAV CCTTC 2 cut(s) 271, 384
HpyCH4IV ACGT 1 cut(s) 76
HpyCH4V TGCA 5 cut(s) 59, 131, 233, 334, 467
HpySE526I ACGT 1 cut(s) 76
Hsp92II CATG 4 cut(s) 149, 230, 427, 479
Ksp22I TGATCA 1 cut(s) 297
Kzo9I GATC 3 cut(s) 100, 120, 297
Lsp1109I GCAGC 3 cut(s) 71, 153, 245
LweI GCATC 3 cut(s) 71, 140, 476
MaeI CTAG 1 cut(s) 462
MaeII ACGT 1 cut(s) 76
MaeIII GTNAC 1 cut(s) 209
MalI GATC 3 cut(s) 102, 122, 299
MboI GATC 3 cut(s) 100, 120, 297
MboII GAAGA 1 cut(s) 17
MfeI CAATTG 1 cut(s) 66
MluCI AATT 2 cut(s) 66, 194
MlyI GAGTC 1 cut(s) 37
MnlI CCTC 4 cut(s) 33, 192, 241, 311
MseI TTAA 2 cut(s) 159, 401
MunI CAATTG 1 cut(s) 66
NdeII GATC 3 cut(s) 100, 120, 297
NlaIII CATG 4 cut(s) 149, 230, 427, 479
NmuCI GTSAC 1 cut(s) 209
PfeI GAWTC 2 cut(s) 86, 185
PkrI GCNGC 3 cut(s) 61, 168, 235
PleI GAGTC 1 cut(s) 37
PpsI GAGTC 1 cut(s) 37
PspPI GGNCC 1 cut(s) 393
RsaI GTAC 1 cut(s) 350
RsaNI GTAC 1 cut(s) 349
SalI GTCGAC 1 cut(s) 149
SaqAI TTAA 2 cut(s) 159, 401
SatI GCNGC 3 cut(s) 60, 167, 234
Sau3AI GATC 3 cut(s) 100, 120, 297
Sau96I GGNCC 1 cut(s) 393
SchI GAGTC 1 cut(s) 37
SetI ASST 7 cut(s) 79, 168, 282, 366, 375, 408, 454
SfaNI GCATC 3 cut(s) 71, 140, 476
SinI GGWCC 1 cut(s) 393
SmlI CTYRAG 2 cut(s) 205, 272
SmoI CTYRAG 2 cut(s) 205, 272
SpeI ACTAGT 1 cut(s) 461
Sse9I AATT 2 cut(s) 66, 194
SspI AATATT 2 cut(s) 13, 266
SspMI CTAG 1 cut(s) 462
StyI CCWWGG 1 cut(s) 360
TaiI ACGT 1 cut(s) 79
TaqI TCGA 5 cut(s) 94, 150, 183, 369, 384
TasI AATT 2 cut(s) 66, 194
TfiI GAWTC 2 cut(s) 86, 185
Tru1I TTAA 2 cut(s) 159, 401
Tru9I TTAA 2 cut(s) 159, 401
TseFI GTSAC 1 cut(s) 209
TseI GCWGC 3 cut(s) 59, 166, 233
Tsp45I GTSAC 1 cut(s) 209
VpaK11BI GGWCC 1 cut(s) 393
XmiI GTMKAC 1 cut(s) 150
XspI CTAG 1 cut(s) 462
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.