Prupe.3G135700_v2.0.a1

Ankyrin repeats (many copies)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
OG0000494
Physical Location & Seq
Reverse (-)
14298914 .. 14304089
5176 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G135700.2

Sequence Viewer

Length: 2118 bp
ATGGCGGAGGGCCTCATCACAATCGTGCTGGCAAGAATTACTCGCATAATCTACTGGGGTTTGGGGTCGCCGCTCCTCTCGGATTACGAACACTTATGGATACAGTTGGCAGATGGATTTGCGAGGGTGTGGACAGGAGTATTGAAGAAAGAAGCACATAAACTCCAGAACCTTGACGAAATAGCAGACCCGTACCAGAAGCTGTACAAGTGTGCAACTGAGGGCAGGCTAGATCAATTTCTAGTGACTGTGGGCAAGCGTGAGAGTACAAATGATGCAAATGTTGACATCCAGCTACTCTGCGAACTAAGCCCCTTGAAAAACACATTTCTTCACATAGCTGTGAGCTTCGGCCATGAAGTTCTAGCATCTGAGATCGTAAAACTTCACAAGCCCCTTTTGTTCGAGAAAAACTTTCAAGGAGACACTGCGCTCCATCTTGCGGCCAGAGATGGGAATCTGGATATGGTAAAATATCTCTGCTCAAGTGAAGGAGAAGCAACAGATATTGAAAATTATATGTCATCAAGGAATCCAGGTTCAGGTGAAAGCAATGTCACAGATATTGAAAACGACCGCATGCGGTTGCTGAGGATGAAAAATGATGAGGAAAACATGGCTTTGCATGAAGCACTGATTAAAGGCCACAAAAAAGTGGCAACATATTTGATTGTGGCCGATCCGGATCATGACCATCCGGTTTCATTTTCTACAAATAAGGAAGGCAAATCACCTTTGTATCTGGCCATTCAAGCAGGGGATGTCCGAATTGTGAAGTGTATAAGTCAACGGTACCGGTCGCCTAGGAACTTGGCGGTGGAAGGGAAGTCCCCATTGCATGCTGCAATTCTGGCCAAGAACAAAGAGCTCCTAGAGATAATATCAACCATGGAATTTACCATCAACGTAAAAGATGAGAAAGGAAGGACCCCACTTCATTATGCAGCGTCAACTGGTTATCTCGAAGGGGTTCGCTTCTTCTTGGACAAATGTCCCTCTGACTCTAATCAAGCAGATACTAGTGGCTTCCTCCCGATCCATTCTGCATCAAGCAAAGGTTATGACAAGATTGTTGAAGAGCTGCTTCGACATTTTCCAGCTTCGAAGGAATTGCCAAACTCAGATGGCCAAAATATACTCCATCTTGCAGCAAAATTTGGAAAACATGCCCTTGTTAACTATTTTCTAAGACAAGGTAATGGGTTTCGGATGTTGATAAACCAACAGGATAAGGAGGGAAATACCCCTTTACATTTGGCAACAATTCATCGGCATCCAAGAGTTGTGAAATATTTCACATGGGAAAAAAAGACCAACTTAATGCTTTTGAACAATAAAGGCATGACAGCTCTTGACATTGCAGAGTCCACTATGGAAGCTGTTGCTTCATTTCATGGGAGACTAACATGGGTAGCACTGAAATCTGGCGGTGCGCAGCGAGCTCAGCCTCTGCATGTTCTCTCACGGACAAATGCGCAGAGTCCACAGCAAGACGATGTAGGAGACAAGGATGGACATGTCGCAACTATGAGTCAAGATGTCCGAGATGAAATTATAAATTCTTGTAGAGCAGACCGCATGGAGTTACAGTTTCCTAACAAGAAAAGTTACAAGGACAGGGTGAACACTCTATTGGTGGTAACTACACTTATAGCTACAGTGACATTTGCAGCCGGTTTCACAATGCCGGGTGGCTACAATAACTCCGGTCCTCATGAGGGCAAAGCAACCTTGCTAACCGAGGTTATGTTCCAAGTGTTTGTGATCAGTAACACCATAGCTATGTATAGCTCCATCTTTGTTGCAGTTACTCTCATTTGGGCACAAGTGGGAGACCTAATTTTGGTGTTCACAGCTCTTCGTTTGGTAATGCCTCTGCTGGGGGTTGCGCTTGGCATGCTGTCCTTAGCCTTTATGGCTGGCGTTTATGTGGTCGTAAGCAACCTTCGTTGGCTTTCAATCGTGGTGTTGATCATCGGAATATGCTTTCTTTACAGTGTCATAATATTTTTCAGCCCACTCTTCTTTCCAGATACAACACCTACTTTTCATTACATCACCTATTATCCCTTTTATTTGGCAGCGCTCAGTTACAGCAACGATCTAGAAGAAGAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04310 map04310
Pfam Domains
Protein Families
Ank Ank_2 Ank_4 PGG

Protein Analysis

706

Amino Acids

78.78

Weight (kDa)

6.48

Isoelectric Point (pI)

33.57

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000494)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G03670 AT4G03440 AT4G03440 AT4G03440 AT4G03450 AT4G03450 AT4G03460 AT4G03460 AT4G03470 AT4G03480 AT4G03480 AT4G03490 AT4G03490 AT4G03490 AT4G03490 AT4G03490 AT4G03500 AT4G03500 AT4G03500 AT4G03505 AT4G05040 AT4G05040 AT4G05040 AT4G05040 AT4G05040 AT4G05040 AT4G05040 AT4G14390 AT4G14390 AT4G14390 AT4G14390 AT4G14400 AT4G14400 AT4G14400
fragaria_vesca FvH4_3g05910 FvH4_3g23320
malus_domestica MD03G1094000.v1.1 MD03G1094200.v1.1 MD03G1094600.v1.1 MD12G1218700.v1.1
prunus_persica Prupe.3G135100_v2.0.a1 Prupe.3G135200_v2.0.a1 Prupe.3G135700_v2.0.a1 Prupe.3G135700_v2.0.a1 Prupe.3G142400_v2.0.a1 Prupe.3G153800_v2.0.a1 Prupe.3G153800_v2.0.a1 Prupe.3G153800_v2.0.a1 Prupe.3G153800_v2.0.a1 Prupe.3G154000_v2.0.a1 Prupe.3G154200_v2.0.a1 Prupe.3G154200_v2.0.a1 Prupe.3G154600_v2.0.a1 Prupe.3G154700_v2.0.a1 Prupe.3G155200_v2.0.a1 Prupe.3G155300_v2.0.a1 Prupe.8G110300_v2.0.a1
pyrus_communis pycom03g07280 pycom03g07580 pycom03g07660 pycom03g07700 pycom03g07710
rosa_chinensis RchiOBHm_Chr3g0461161 RchiOBHm_Chr5g0041111
rosa_laevigata RLG00000023472 RLG00000023475 RLG00000034025
rosa_multiflora Rmu_co8126040.1_g000001 Rmu_co8268563.1_g000001 Rmu_sc0000964.1_g000014 Rmu_sc0028923.1_g000001 Rmu_sc0042194.1_g000001
rosa_roxburghii Rroxscaffold_1G00039610 Rroxscaffold_6G00401360
rosa_rugosa Rorug03G0048600 Rorug03G0048700 Rorug05G0190000
rosa_samantha Rh3AG105900 Rh3BG110200 Rh3BG268400 Rh3CG111800 Rh3DG111900 Rh5AG275800 Rh5BG280500 Rh5CG312600 Rh5DG288800
rosa_wichuraiana Rw3G009080 Rw5G025920

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1556
Acc16I TGCGCA 2 cut(s) 1434, 1476
Acc65I GGTACC 1 cut(s) 792
AccB1I GGYRCC 1 cut(s) 792
AccBSI CCGCTC 1 cut(s) 73
AccIII TCCGGA 1 cut(s) 682
AciI CCGC 8 cut(s) 5, 71, 443, 577, 583, 815, 1428, 1576
AclWI GGATC 3 cut(s) 674, 693, 1030
AcoI YGGCCR 6 cut(s) 352, 444, 675, 744, 852, 1126
AcsI RAATTY 3 cut(s) 893, 1154, 1558
AfaI GTAC 4 cut(s) 194, 206, 268, 794
AfeI AGCGCT 1 cut(s) 2085
AfiI CCNNNNNNNGG 6 cut(s) 442, 453, 542, 1718, 1843, 1880
AflIII ACRYGT 1 cut(s) 1516
AgeI ACCGGT 1 cut(s) 795
AgsI TTSAA 9 cut(s) 145, 319, 419, 512, 569, 752, 1076, 1330, 1959
AhlI ACTAGT 1 cut(s) 1019
AjnI CCWGG 1 cut(s) 535
AjuI GAANNNNNNNTTGG 2 cut(s) 1616, 1648
AleI CACNNNNGTG 1 cut(s) 23
AloI GAACNNNNNNTCC 2 cut(s) 523, 555
Alw21I GWGCWC 2 cut(s) 870, 1444
Alw26I GTCTC 4 cut(s) 417, 1393, 1497, 1827
AlwI GGATC 3 cut(s) 674, 693, 1030
AlwNI CAGNNNCTG 2 cut(s) 202, 1450
Aor13HI TCCGGA 1 cut(s) 682
Aor51HI AGCGCT 1 cut(s) 2085
AoxI GGCC 8 cut(s) 10, 352, 444, 643, 675, 744, 852, 1126
ApeKI GCWGC 7 cut(s) 842, 944, 1081, 1148, 1435, 1670, 2081
ApoI RAATTY 3 cut(s) 893, 1154, 1558
AsiGI ACCGGT 1 cut(s) 795
Asp700I GAANNNNTTC 2 cut(s) 969, 1292
Asp718I GGTACC 1 cut(s) 792
AspA2I CCTAGG 1 cut(s) 803
AspLEI GCGC 5 cut(s) 433, 1435, 1477, 1891, 2086
AspS9I GGNCC 3 cut(s) 10, 927, 1709
AsuC2I CCSGG 1 cut(s) 1689
AsuHPI GGTGA 4 cut(s) 557, 723, 1633, 2050
AsuII TTCGAA 1 cut(s) 1103
AvaII GGWCC 2 cut(s) 927, 1709
AvrII CCTAGG 1 cut(s) 803
BaeGI GKGCMC 1 cut(s) 1825
BaeI ACNNNNGTAYC 2 cut(s) 722, 755
BalI TGGCCA 3 cut(s) 746, 854, 1128
BanI GGYRCC 1 cut(s) 792
BanII GRGCYC 2 cut(s) 870, 1444
BarI GAAGNNNNNNTAC 2 cut(s) 1929, 1961
Bbv12I GWGCWC 2 cut(s) 870, 1444
BbvCI CCTCAGC 1 cut(s) 590
BbvI GCAGC 7 cut(s) 829, 956, 1068, 1160, 1447, 1682, 2093
BccI CCATC 9 cut(s) 107, 444, 446, 702, 908, 1118, 1149, 1505, 1802
BcgI CGANNNNNNTGC 2 cut(s) 1093, 1127
BciT130I CCWGG 1 cut(s) 537
BciVI GTATCC 1 cut(s) 93
BclI TGATCA 2 cut(s) 1764, 1971
BcnI CCSGG 1 cut(s) 1689
BcoDI GTCTC 4 cut(s) 417, 1393, 1497, 1827
BcuI ACTAGT 1 cut(s) 1019
BfaI CTAG 7 cut(s) 230, 242, 365, 804, 872, 1020, 2105
BfmI CTRYAG 1 cut(s) 1656
BfoI RGCGCY 1 cut(s) 2087
BfuI GTATCC 1 cut(s) 93
BglI GCCNNNNNGGC 1 cut(s) 1916
BisI GCNGC 9 cut(s) 71, 444, 843, 945, 1082, 1149, 1436, 1671, 2082
BlnI CCTAGG 1 cut(s) 803
BlpI GCTNAGC 1 cut(s) 1443
BlsI GCNGC 9 cut(s) 72, 445, 844, 946, 1083, 1150, 1437, 1672, 2083
Bme1390I CCNGG 2 cut(s) 537, 1689
Bme18I GGWCC 2 cut(s) 927, 1709
BmgT120I GGNCC 3 cut(s) 10, 927, 1709
BmiI GGNNCC 2 cut(s) 794, 929
BmrFI CCNGG 2 cut(s) 537, 1689
BmrI ACTGGG 1 cut(s) 64
BmsI GCATC 4 cut(s) 265, 377, 1055, 1282
BmuI ACTGGG 1 cut(s) 64
BoxI GACNNNNGTC 1 cut(s) 990
BpmI CTGGAG 1 cut(s) 149
Bpu10I CCTNAGC 2 cut(s) 590, 1906
Bpu1102I GCTNAGC 1 cut(s) 1443
Bpu14I TTCGAA 1 cut(s) 1103
BpuEI CTTGAG 1 cut(s) 469
BpuMI CCSGG 1 cut(s) 1689
BsaBI GATNNNNATC 2 cut(s) 456, 684
BsaI GGTCTC 1 cut(s) 1827
BsaJI CCNNGG 3 cut(s) 803, 888, 1740
BsaWI WCCGGW 4 cut(s) 682, 697, 795, 1706
BsaXI ACNNNNNCTCC 6 cut(s) 147, 177, 1574, 1604, 1688, 1718
Bsc4I CCNNNNNNNGG 6 cut(s) 442, 453, 542, 1718, 1843, 1880
Bse118I RCCGGY 2 cut(s) 795, 1673
Bse1I ACTGG 2 cut(s) 59, 958
Bse3DI GCAATG 3 cut(s) 559, 833, 1356
Bse8I GATNNNNATC 2 cut(s) 456, 684
BseAI TCCGGA 1 cut(s) 682
BseBI CCWGG 1 cut(s) 537
BseDI CCNNGG 3 cut(s) 803, 888, 1740
BseGI GGATG 7 cut(s) 288, 600, 694, 766, 1215, 1273, 1516
BseJI GATNNNNATC 2 cut(s) 456, 684
BseLI CCNNNNNNNGG 6 cut(s) 442, 453, 542, 1718, 1843, 1880
BseMI GCAATG 3 cut(s) 559, 833, 1356
BseMII CTCAG 6 cut(s) 210, 363, 581, 1134, 1457, 2101
BseNI ACTGG 2 cut(s) 59, 958
BseRI GAGGAG 1 cut(s) 65
BseSI GKGCMC 1 cut(s) 1825
BseXI GCAGC 7 cut(s) 829, 956, 1068, 1160, 1447, 1682, 2093
BseYI CCCAGC 1 cut(s) 1879
Bsh1285I CGRYCG 2 cut(s) 577, 800
BshFI GGCC 8 cut(s) 12, 354, 446, 645, 677, 746, 854, 1128
BshNI GGYRCC 1 cut(s) 792
BshTI ACCGGT 1 cut(s) 795
BsiEI CGRYCG 2 cut(s) 577, 800
BsiHKAI GWGCWC 2 cut(s) 870, 1444
BsiSI CCGG 6 cut(s) 683, 698, 796, 1674, 1688, 1707
BslFI GGGAC 2 cut(s) 814, 978
BslI CCNNNNNNNGG 6 cut(s) 442, 453, 542, 1718, 1843, 1880
BsmAI GTCTC 4 cut(s) 417, 1393, 1497, 1827
BsmFI GGGAC 2 cut(s) 814, 978
BsnI GGCC 8 cut(s) 12, 354, 446, 645, 677, 746, 854, 1128
Bso31I GGTCTC 1 cut(s) 1827
Bsp119I TTCGAA 1 cut(s) 1103
Bsp1286I GDGCHC 3 cut(s) 870, 1444, 1825
Bsp13I TCCGGA 1 cut(s) 682
Bsp1407I TGTACA 1 cut(s) 204
Bsp143I GATC 8 cut(s) 232, 375, 679, 685, 1035, 1764, 1971, 2101
Bsp1720I GCTNAGC 1 cut(s) 1443
Bsp19I CCATGG 1 cut(s) 888
BspACI CCGC 8 cut(s) 5, 71, 443, 577, 583, 815, 1428, 1576
BspANI GGCC 8 cut(s) 12, 354, 446, 645, 677, 746, 854, 1128
BspCNI CTCAG 6 cut(s) 211, 364, 582, 1133, 1456, 2100
BspEI TCCGGA 1 cut(s) 682
BspHI TCATGA 2 cut(s) 688, 1714
BspLI GGNNCC 2 cut(s) 794, 929
BspPI GGATC 3 cut(s) 674, 693, 1030
BspQI GCTCTTC 2 cut(s) 1071, 1863
BspT104I TTCGAA 1 cut(s) 1103
BspT107I GGYRCC 1 cut(s) 792
BspTNI GGTCTC 1 cut(s) 1827
BsrBI CCGCTC 1 cut(s) 73
BsrDI GCAATG 3 cut(s) 559, 833, 1356
BsrFI RCCGGY 2 cut(s) 795, 1673
BsrGI TGTACA 1 cut(s) 204
BsrI ACTGG 2 cut(s) 59, 958
BssAI RCCGGY 2 cut(s) 795, 1673
BssECI CCNNGG 3 cut(s) 803, 888, 1740
BssMI GATC 8 cut(s) 232, 375, 679, 685, 1035, 1764, 1971, 2101
BssT1I CCWWGG 2 cut(s) 803, 888
Bst2UI CCWGG 1 cut(s) 537
Bst4CI ACNGT 6 cut(s) 105, 250, 792, 1590, 1660, 1997
Bst6I CTCTTC 4 cut(s) 1071, 1863, 2027, 2106
BstAUI TGTACA 1 cut(s) 204
BstBI TTCGAA 1 cut(s) 1103
BstC8I GCNNGC 8 cut(s) 30, 227, 257, 581, 840, 1440, 1898, 1921
BstDEI CTNAG 9 cut(s) 219, 308, 372, 590, 1120, 1187, 1443, 1906, 2087
BstDSI CCRYGG 1 cut(s) 888
BstF5I GGATG 7 cut(s) 288, 600, 694, 766, 1215, 1273, 1516
BstH2I RGCGCY 1 cut(s) 2087
BstHHI GCGC 5 cut(s) 433, 1435, 1477, 1891, 2086
BstKTI GATC 8 cut(s) 235, 378, 682, 688, 1038, 1767, 1974, 2104
BstMAI GTCTC 4 cut(s) 417, 1393, 1497, 1827
BstMBI GATC 8 cut(s) 232, 375, 679, 685, 1035, 1764, 1971, 2101
BstMCI CGRYCG 2 cut(s) 577, 800
BstMWI GCNNNNNNNGC 7 cut(s) 309, 752, 851, 1439, 1444, 1897, 1916
BstNI CCWGG 1 cut(s) 537
BstNSI RCATGY 6 cut(s) 583, 842, 1169, 1457, 1520, 1900
BstPAI GACNNNNGTC 1 cut(s) 990
BstSCI CCNGG 2 cut(s) 535, 1687
BstSFI CTRYAG 1 cut(s) 1656
BstSLI GKGCMC 1 cut(s) 1825
BstV1I GCAGC 7 cut(s) 829, 956, 1068, 1160, 1447, 1682, 2093
BsuI GTATCC 1 cut(s) 93
BsuRI GGCC 8 cut(s) 12, 354, 446, 645, 677, 746, 854, 1128
BtgI CCRYGG 1 cut(s) 888
BtsCI GGATG 7 cut(s) 288, 600, 694, 766, 1215, 1273, 1516
BtsI GCAGTG 1 cut(s) 426
BtsIMutI CAGTG 5 cut(s) 426, 632, 1415, 1665, 2002
Cac8I GCNNGC 8 cut(s) 30, 227, 257, 581, 840, 1440, 1898, 1921
CaiI CAGNNNCTG 2 cut(s) 202, 1450
CciI TCATGA 2 cut(s) 688, 1714
CfoI GCGC 5 cut(s) 433, 1435, 1477, 1891, 2086
Cfr10I RCCGGY 2 cut(s) 795, 1673
Cfr13I GGNCC 3 cut(s) 10, 927, 1709
CseI GACGC 1 cut(s) 936
Csp6I GTAC 4 cut(s) 193, 205, 267, 793
CspAI ACCGGT 1 cut(s) 795
CviQI GTAC 4 cut(s) 193, 205, 267, 793
DdeI CTNAG 9 cut(s) 219, 308, 372, 590, 1120, 1187, 1443, 1906, 2087
DpnI GATC 8 cut(s) 234, 377, 681, 687, 1037, 1766, 1973, 2103
DpnII GATC 8 cut(s) 232, 375, 679, 685, 1035, 1764, 1971, 2101
EaeI YGGCCR 6 cut(s) 352, 444, 675, 744, 852, 1126
Eam1104I CTCTTC 4 cut(s) 1071, 1863, 2027, 2106
EarI CTCTTC 4 cut(s) 1071, 1863, 2027, 2106
EciI GGCGGA 1 cut(s) 20
Ecl136II GAGCTC 2 cut(s) 868, 1442
Eco130I CCWWGG 2 cut(s) 803, 888
Eco24I GRGCYC 2 cut(s) 870, 1444
Eco31I GGTCTC 1 cut(s) 1827
Eco47I GGWCC 2 cut(s) 927, 1709
Eco47III AGCGCT 1 cut(s) 2085
Eco53kI GAGCTC 2 cut(s) 868, 1442
EcoICRI GAGCTC 2 cut(s) 868, 1442
EcoO109I RGGNCCY 2 cut(s) 10, 927
EcoRII CCWGG 1 cut(s) 535
EcoT14I CCWWGG 2 cut(s) 803, 888
EcoT38I GRGCYC 2 cut(s) 870, 1444
ErhI CCWWGG 2 cut(s) 803, 888
FalI AAGNNNNNCTT 4 cut(s) 1068, 1100, 1301, 1333
FaqI GGGAC 2 cut(s) 814, 978
FbaI TGATCA 2 cut(s) 1764, 1971
Fnu4HI GCNGC 9 cut(s) 71, 444, 843, 945, 1082, 1149, 1436, 1671, 2082
FokI GGATG 7 cut(s) 275, 607, 681, 773, 1222, 1260, 1523
FriOI GRGCYC 2 cut(s) 870, 1444
Fsp4HI GCNGC 9 cut(s) 71, 444, 843, 945, 1082, 1149, 1436, 1671, 2082
FspBI CTAG 7 cut(s) 230, 242, 365, 804, 872, 1020, 2105
FspI TGCGCA 2 cut(s) 1434, 1476
GlaI GCGC 5 cut(s) 432, 1434, 1476, 1890, 2085
GluI GCNGC 9 cut(s) 71, 444, 843, 945, 1082, 1149, 1436, 1671, 2082
GsaI CCCAGC 1 cut(s) 1883
GsuI CTGGAG 1 cut(s) 149
HaeII RGCGCY 1 cut(s) 2087
HaeIII GGCC 8 cut(s) 12, 354, 446, 645, 677, 746, 854, 1128
HapII CCGG 6 cut(s) 683, 698, 796, 1674, 1688, 1707
HgaI GACGC 1 cut(s) 936
HhaI GCGC 5 cut(s) 433, 1435, 1477, 1891, 2086
Hin6I GCGC 5 cut(s) 431, 1433, 1475, 1889, 2084
HinP1I GCGC 5 cut(s) 431, 1433, 1475, 1889, 2084
HincII GTYRAC 4 cut(s) 286, 788, 951, 1177
HindII GTYRAC 4 cut(s) 286, 788, 951, 1177
HinfI GANTC 6 cut(s) 457, 532, 1001, 1364, 1480, 1531
HpaI GTTAAC 1 cut(s) 1177
HpaII CCGG 6 cut(s) 683, 698, 796, 1674, 1688, 1707
HphI GGTGA 4 cut(s) 557, 723, 1633, 2050
Hpy166II GTNNAC 9 cut(s) 132, 286, 788, 951, 1177, 1368, 1484, 1624, 1851
Hpy188I TCNGA 8 cut(s) 82, 373, 767, 1000, 1123, 1209, 1544, 1979
Hpy8I GTNNAC 9 cut(s) 132, 286, 788, 951, 1177, 1368, 1484, 1624, 1851
HpyAV CCTTC 7 cut(s) 485, 716, 815, 918, 959, 1099, 1955
HpyCH4III ACNGT 6 cut(s) 105, 250, 792, 1590, 1660, 1997
HpyCH4IV ACGT 1 cut(s) 906
HpyF10VI GCNNNNNNNGC 7 cut(s) 309, 752, 851, 1439, 1444, 1897, 1916
HpyF3I CTNAG 9 cut(s) 219, 308, 372, 590, 1120, 1187, 1443, 1906, 2087
HpySE526I ACGT 1 cut(s) 906
HspAI GCGC 5 cut(s) 431, 1433, 1475, 1889, 2084
Kpn2I TCCGGA 1 cut(s) 682
KpnI GGTACC 1 cut(s) 796
Ksp22I TGATCA 2 cut(s) 1764, 1971
KspAI GTTAAC 1 cut(s) 1177
Kzo9I GATC 8 cut(s) 232, 375, 679, 685, 1035, 1764, 1971, 2101
LguI GCTCTTC 2 cut(s) 1071, 1863
LmnI GCTCC 4 cut(s) 78, 438, 873, 1796
Lsp1109I GCAGC 7 cut(s) 829, 956, 1068, 1160, 1447, 1682, 2093
LweI GCATC 4 cut(s) 265, 377, 1055, 1282
MaeI CTAG 7 cut(s) 230, 242, 365, 804, 872, 1020, 2105
MaeII ACGT 1 cut(s) 906
MaeIII GTNAC 9 cut(s) 244, 556, 1584, 1607, 1639, 1660, 1769, 1807, 2090
MalI GATC 8 cut(s) 234, 377, 681, 687, 1037, 1766, 1973, 2103
MbiI CCGCTC 1 cut(s) 73
MboI GATC 8 cut(s) 232, 375, 679, 685, 1035, 1764, 1971, 2101
MboII GAAGA 6 cut(s) 157, 323, 970, 1088, 1850, 2014
MhlI GDGCHC 3 cut(s) 870, 1444, 1825
MlsI TGGCCA 3 cut(s) 746, 854, 1128
MluNI TGGCCA 3 cut(s) 746, 854, 1128
MlyI GAGTC 4 cut(s) 995, 1373, 1489, 1540
Mox20I TGGCCA 3 cut(s) 746, 854, 1128
MroI TCCGGA 1 cut(s) 682
MroXI GAANNNNTTC 2 cut(s) 969, 1292
MscI TGGCCA 3 cut(s) 746, 854, 1128
MseI TTAA 3 cut(s) 639, 1176, 1319
MslI CAYNNNNRTG 3 cut(s) 23, 341, 1781
Msp20I TGGCCA 3 cut(s) 746, 854, 1128
MspI CCGG 6 cut(s) 683, 698, 796, 1674, 1688, 1707
MspR9I CCNGG 2 cut(s) 537, 1689
MvaI CCWGG 1 cut(s) 537
MwoI GCNNNNNNNGC 7 cut(s) 309, 752, 851, 1439, 1444, 1897, 1916
NciI CCSGG 1 cut(s) 1689
NcoI CCATGG 1 cut(s) 888
NdeII GATC 8 cut(s) 232, 375, 679, 685, 1035, 1764, 1971, 2101
NlaIV GGNNCC 2 cut(s) 794, 929
NmuCI GTSAC 3 cut(s) 244, 556, 1660
NsbI TGCGCA 2 cut(s) 1434, 1476
NspI RCATGY 6 cut(s) 583, 842, 1169, 1457, 1520, 1900
NspV TTCGAA 1 cut(s) 1103
OliI CACNNNNGTG 1 cut(s) 23
PaeI GCATGC 3 cut(s) 583, 842, 1900
PagI TCATGA 2 cut(s) 688, 1714
PciI ACATGT 1 cut(s) 1516
PciSI GCTCTTC 2 cut(s) 1071, 1863
PdmI GAANNNNTTC 2 cut(s) 969, 1292
PfeI GAWTC 2 cut(s) 457, 532
PinAI ACCGGT 1 cut(s) 795
PkrI GCNGC 9 cut(s) 72, 445, 844, 946, 1083, 1150, 1437, 1672, 2083
PleI GAGTC 4 cut(s) 995, 1372, 1488, 1539
PpsI GAGTC 4 cut(s) 995, 1372, 1488, 1539
PpuMI RGGWCCY 1 cut(s) 927
PscI ACATGT 1 cut(s) 1516
PshAI GACNNNNGTC 1 cut(s) 990
PsiI TTATAA 1 cut(s) 1556
Psp124BI GAGCTC 2 cut(s) 870, 1444
Psp5II RGGWCCY 1 cut(s) 927
Psp6I CCWGG 1 cut(s) 535
PspFI CCCAGC 1 cut(s) 1879
PspGI CCWGG 1 cut(s) 535
PspN4I GGNNCC 2 cut(s) 794, 929
PspPI GGNCC 3 cut(s) 10, 927, 1709
PspPPI RGGWCCY 1 cut(s) 927
PstNI CAGNNNCTG 2 cut(s) 202, 1450
RsaI GTAC 4 cut(s) 194, 206, 268, 794
RsaNI GTAC 4 cut(s) 193, 205, 267, 793
RseI CAYNNNNRTG 3 cut(s) 23, 341, 1781
SacI GAGCTC 2 cut(s) 870, 1444
SapI GCTCTTC 2 cut(s) 1071, 1863
SaqAI TTAA 3 cut(s) 639, 1176, 1319
SatI GCNGC 9 cut(s) 71, 444, 843, 945, 1082, 1149, 1436, 1671, 2082
Sau3AI GATC 8 cut(s) 232, 375, 679, 685, 1035, 1764, 1971, 2101
Sau96I GGNCC 3 cut(s) 10, 927, 1709
SchI GAGTC 4 cut(s) 995, 1373, 1489, 1540
ScrFI CCNGG 2 cut(s) 537, 1689
SduI GDGCHC 3 cut(s) 870, 1444, 1825
SfaNI GCATC 4 cut(s) 265, 377, 1055, 1282
SfcI CTRYAG 1 cut(s) 1656
SfuI TTCGAA 1 cut(s) 1103
SinI GGWCC 2 cut(s) 927, 1709
SmiMI CAYNNNNRTG 3 cut(s) 23, 341, 1781
SmlI CTYRAG 1 cut(s) 484
SmoI CTYRAG 1 cut(s) 484
SpeI ACTAGT 1 cut(s) 1019
SphI GCATGC 3 cut(s) 583, 842, 1900
SsiI CCGC 8 cut(s) 5, 71, 443, 577, 583, 815, 1428, 1576
SspI AATATT 2 cut(s) 1292, 2007
SspMI CTAG 7 cut(s) 230, 242, 365, 804, 872, 1020, 2105
SstI GAGCTC 2 cut(s) 870, 1444
StyD4I CCNGG 2 cut(s) 535, 1687
StyI CCWWGG 2 cut(s) 803, 888
TaaI ACNGT 6 cut(s) 105, 250, 792, 1590, 1660, 1997
TaiI ACGT 1 cut(s) 909
TaqI TCGA 4 cut(s) 405, 963, 1087, 1103
TatI WGTACW 2 cut(s) 204, 266
TauI GCSGC 2 cut(s) 73, 446
TfiI GAWTC 2 cut(s) 457, 532
Tru1I TTAA 3 cut(s) 639, 1176, 1319
Tru9I TTAA 3 cut(s) 639, 1176, 1319
TscAI CASTG 5 cut(s) 433, 639, 1422, 1665, 2002
TseFI GTSAC 3 cut(s) 244, 556, 1660
TseI GCWGC 7 cut(s) 842, 944, 1081, 1148, 1435, 1670, 2081
Tsp45I GTSAC 3 cut(s) 244, 556, 1660
TspGWI ACGGA 1 cut(s) 1480
TspRI CASTG 5 cut(s) 433, 639, 1422, 1665, 2002
VpaK11BI GGWCC 2 cut(s) 927, 1709
XapI RAATTY 3 cut(s) 893, 1154, 1558
XbaI TCTAGA 1 cut(s) 2104
XceI RCATGY 6 cut(s) 583, 842, 1169, 1457, 1520, 1900
XmaJI CCTAGG 1 cut(s) 803
XmnI GAANNNNTTC 2 cut(s) 969, 1292
XspI CTAG 7 cut(s) 230, 242, 365, 804, 872, 1020, 2105
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.