pycom03g07660

ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr3
OG0000494
Physical Location & Seq
Reverse (-)
6074174 .. 6077063
2890 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom03g07660.1

Sequence Viewer

Length: 2136 bp
ATGGAGGATGTTGGCTGGCGTTCAAGACAAGATGATCAAATAACTGGCGAGGGTGCTCATGAGAACGCTGCAGGAGACACCGAGGCAGGCGACACGCGCATGGATCCTAAATTATACAGGTATGCAACGATGCCTAAATCAGGATGTCAAGAGTTTATATGGGCTATGTGCACAAAGTATTTTGCCGGAGCCACATGTGCAATACCTATATGTAATATTCCTGATCAAATAGTATCGCTGGTCCTAAGTAGTGAAAACAAAGTAAGCACCCGTGGGAACACGGTGCTTCACCTTGCTGCAAATACAGGCCACGTGCAGCTTATCCAACTAATTACCCTAAATTTCCCGGGGCTTCTCCGCAAACAAAATGATGATGGACAACTTCCGCTACATGTAGCCGCATCCGCTGGCCATCCATCCGCAGTTCGTTGTTTGGTAGACACGGCTCAAGGTAATACGTTTAATGAAAAGGACGGGAGAGGGAACACTGCGTTGCATGTCGCTGTGGAAAATAATCACCAAGATGTGGCTATGTTTTTGGTCGGCAAAGATGGATCCACGTCGCATTCTACAAATAACTCCAGTAAGACTCCCTTGTGCATGGCCGCTGAAACTGCCAATCTTGAACTCGTTAAAGCAATGGTAGCCAACACGCCAAATAGCACAGCAGACGCTAATTCTGGTAATTTTTGGCAAGGATCGAACGGCAACTCAATTCTTCGTAGTGCAATCATATGGAGGAAACAGGCAAAAGGTGGACTCAAGAAAAATAATGCAGTGTTCGTGTTGGTCATGCTCATGATATACCAACCCATCAGTCCATTCTTTTTGCTGGCGGGGGTTGTATGCTGGATGTATTTTAAGCATATAGTTTCTCAACGGTGGCTGCCCAGAACCAACAGAAAGAAGTATACAAATCTCCTAGAGACGATATTGAGCAAAATGGATTCAGCTGATCTAATCAATTCAACGGACCAAGAGTGGATGACTCCTCTTACACTTGCGGCCTATATAGGTAACTTTGTGGCGGTACGGGTATTGTTACACAAATTTACTGGATTGGCATACAAAGGTGACGAAAATCAGTTCCTTCCCATACATGTGGCGTCCAAAAAAGGCCATTGCAGGGTTGTTGAAGAGTTTCTCAATCTTTGCCCGGACTTGAGGGAGTCATGTGACCGTGAAGGCCGGAATATTCTTCATGTTGCGGCCGCGCATGGAAGAGTTAATGTTGTCCGATATATTATTGGAAAGCGCAATCTTCAAGTGCTTAGCAAGCAAAGAGATCAAAGTGGAAATACCCCTCTACATATAGCCGTCCAAAACTGGCATCCTAAGATTGTTAAAATTCTTTCCCTCTTCCATGCGTATGAGAGAGTCAATTTAAATAGTTTGAACAATGCAGGTATGACAGCATTGGACCTTGCAGAGAAGACGGAGGTAGATAAAGAGATGTTGTTTCGGAGAAAACTGACACTTATGGCCTTGAACTTGGCTAATGCTCCACGATCTGAAGAGCGAACAGCCGACAAAGCAAAGCTTGTGATAGAGGATTCTGTTATGAAGTCCTTGCACAATTCTGATAACCTAATGTTTTCGAAAGAGAGTGTCAATACTCTCCTATTAGTGTCAACGCTGGTGGTTGGTATAACGTTTGTTCAAGGCTTCACAATACCAGGTGGATACAGTAGCTCTGGAAATGATGTGGGCACCCCAATTTTTCTTACGCATAGCCTATTCAAAATTTTCTTGATATGCAATACCGTGGCGATGTGCGGCTCCATTACTACTTCAATTGCCCTTATGTGGGCACAAACGCATGACCCTAATATAATCTATGCTTGCATGAGATTTACCTTACCGGTGCTAGGCGTAACGCTTACCATGATGTCCTCGTCATTCCTGGCTGGTGTTGCACTGACAGTGTATCACGTTTTATGGCTTCGCATCTTTGTTTATGCCATGGGATTTTTCTTCACGGTCTTCATAATAGGGCTCCTTGCTCCTCTCATGGATGTTCCAGTTGCCTACGTACCTGCATCATTACGCGGCTTCTTATTCCTTAGCTTTAATCTATTGATGTTTGTAAGCGGATATAATTTCGACGATGATTGGTCTAATAGATGGAGTTTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001101 GO:0002376 GO:0002831 GO:0002833 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0005886 GO:0005887 GO:0006464 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0008152 GO:0008219 GO:0009266 GO:0009314 GO:0009409 GO:0009416 GO:0009605 GO:0009607 GO:0009615 GO:0009617 GO:0009628 GO:0009719 GO:0009725 GO:0009751 GO:0009814 GO:0009816 GO:0009966 GO:0009987 GO:0010033 GO:0010646 GO:0012505 GO:0014070 GO:0016020 GO:0016021 GO:0016567 GO:0019538 GO:0023051 GO:0030176 GO:0031224 GO:0031226 GO:0031227 GO:0031347 GO:0031349 GO:0031984 GO:0032101 GO:0032103 GO:0032446 GO:0032870 GO:0035690 GO:0036211 GO:0042175 GO:0042221 GO:0042493 GO:0042742 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043900 GO:0043902 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044459 GO:0044464 GO:0045087 GO:0046677 GO:0048518 GO:0048583 GO:0048584 GO:0050789 GO:0050794 GO:0050826 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0065007 GO:0070647 GO:0070887 GO:0071229 GO:0071236 GO:0071310 GO:0071407 GO:0071446 GO:0071495 GO:0071704 GO:0071944 GO:0080134 GO:0098542 GO:0098827 GO:1900150 GO:1900424 GO:1900426 GO:1901564 GO:1901700 GO:1901701 GO:1902288 GO:1902290 GO:2000031 GO:2001023 GO:2001038
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank Ank_2 Ank_4 PGG

Protein Analysis

712

Amino Acids

78.74

Weight (kDa)

8.65

Isoelectric Point (pI)

32.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 77 - 152 4.9e-09 Ankyrin repeats (3 copies)
Ank_2 PF12796 121 - 183 6.2e-12 Ankyrin repeats (3 copies)
Ank_2 PF12796 366 - 452 3.2e-14 Ankyrin repeats (3 copies)
Ank_5 PF13857 393 - 439 4.6e-06 Ankyrin repeats (many copies)
Ank_4 PF13637 400 - 451 5.4e-07 Ankyrin repeats (many copies)
PGG PF13962 534 - 640 2e-21 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000494)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G03670 AT4G03440 AT4G03440 AT4G03440 AT4G03450 AT4G03450 AT4G03460 AT4G03460 AT4G03470 AT4G03480 AT4G03480 AT4G03490 AT4G03490 AT4G03490 AT4G03490 AT4G03490 AT4G03500 AT4G03500 AT4G03500 AT4G03505 AT4G05040 AT4G05040 AT4G05040 AT4G05040 AT4G05040 AT4G05040 AT4G05040 AT4G14390 AT4G14390 AT4G14390 AT4G14390 AT4G14400 AT4G14400 AT4G14400
fragaria_vesca FvH4_3g05910 FvH4_3g23320
malus_domestica MD03G1094000.v1.1 MD03G1094200.v1.1 MD03G1094600.v1.1 MD12G1218700.v1.1
prunus_persica Prupe.3G135100_v2.0.a1 Prupe.3G135200_v2.0.a1 Prupe.3G135700_v2.0.a1 Prupe.3G135700_v2.0.a1 Prupe.3G142400_v2.0.a1 Prupe.3G153800_v2.0.a1 Prupe.3G153800_v2.0.a1 Prupe.3G153800_v2.0.a1 Prupe.3G153800_v2.0.a1 Prupe.3G154000_v2.0.a1 Prupe.3G154200_v2.0.a1 Prupe.3G154200_v2.0.a1 Prupe.3G154600_v2.0.a1 Prupe.3G154700_v2.0.a1 Prupe.3G155200_v2.0.a1 Prupe.3G155300_v2.0.a1 Prupe.8G110300_v2.0.a1
pyrus_communis pycom03g07280 pycom03g07580 pycom03g07660 pycom03g07700 pycom03g07710
rosa_chinensis RchiOBHm_Chr3g0461161 RchiOBHm_Chr5g0041111
rosa_laevigata RLG00000023472 RLG00000023475 RLG00000034025
rosa_multiflora Rmu_co8126040.1_g000001 Rmu_co8268563.1_g000001 Rmu_sc0000964.1_g000014 Rmu_sc0028923.1_g000001 Rmu_sc0042194.1_g000001
rosa_roxburghii Rroxscaffold_1G00039610 Rroxscaffold_6G00401360
rosa_rugosa Rorug03G0048600 Rorug03G0048700 Rorug05G0190000
rosa_samantha Rh3AG105900 Rh3BG110200 Rh3BG268400 Rh3CG111800 Rh3DG111900 Rh5AG275800 Rh5BG280500 Rh5CG312600 Rh5DG288800
rosa_wichuraiana Rw3G009080 Rw5G025920

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 1394, 2044
AccB1I GGYRCC 1 cut(s) 1709
AccB7I CCANNNNNTGG 1 cut(s) 526
AccI GTMKAC 2 cut(s) 438, 911
AccII CGCG 3 cut(s) 97, 1214, 2049
AclI AACGTT 1 cut(s) 1652
AclWI GGATC 5 cut(s) 98, 111, 549, 562, 706
AcoI YGGCCR 3 cut(s) 409, 603, 1209
AcsI RAATTY 4 cut(s) 340, 1049, 1347, 1743
AcuI CTGAAG 1 cut(s) 1533
AcvI CACGTG 1 cut(s) 313
AcyI GRCGYC 1 cut(s) 1106
AfaI GTAC 2 cut(s) 1032, 2034
AfiI CCNNNNNNNGG 6 cut(s) 140, 526, 1126, 1806, 1807, 1868
AflIII ACRYGT 3 cut(s) 194, 391, 1099
AgeI ACCGGT 1 cut(s) 1861
AjiI CACGTC 1 cut(s) 561
AjnI CCWGG 2 cut(s) 1675, 1902
AluBI AGCT 5 cut(s) 319, 953, 1540, 1692, 2067
AluI AGCT 5 cut(s) 319, 953, 1540, 1692, 2067
Alw21I GWGCWC 2 cut(s) 58, 173
Alw26I GTCTC 2 cut(s) 69, 920
Alw44I GTGCAC 1 cut(s) 169
AlwI GGATC 5 cut(s) 98, 111, 549, 562, 706
Ama87I CYCGRG 1 cut(s) 346
AoxI GGCC 8 cut(s) 307, 409, 603, 1005, 1117, 1186, 1209, 1482
ApaLI GTGCAC 1 cut(s) 169
ApeKI GCWGC 4 cut(s) 68, 296, 316, 886
ApoI RAATTY 4 cut(s) 340, 1049, 1347, 1743
AsiGI ACCGGT 1 cut(s) 1861
Asp700I GAANNNNTTC 1 cut(s) 1140
AspLEI GCGC 3 cut(s) 99, 1216, 1257
AspS9I GGNCC 3 cut(s) 241, 973, 1420
AsuC2I CCSGG 3 cut(s) 347, 348, 1157
AsuHPI GGTGA 3 cut(s) 281, 509, 1085
AsuII TTCGAA 1 cut(s) 1598
AvaI CYCGRG 1 cut(s) 346
AvaII GGWCC 3 cut(s) 241, 973, 1420
BaeGI GKGCMC 3 cut(s) 173, 1712, 1813
BalI TGGCCA 1 cut(s) 411
BamHI GGATCC 2 cut(s) 103, 554
BanI GGYRCC 1 cut(s) 1709
BanII GRGCYC 1 cut(s) 1998
BbrPI CACGTG 1 cut(s) 313
BbsI GAAGAC 2 cut(s) 1439, 1975
Bbv12I GWGCWC 2 cut(s) 58, 173
BbvI GCAGC 4 cut(s) 55, 283, 328, 873
BccI CCATC 6 cut(s) 368, 420, 424, 545, 821, 2118
BceAI ACGGC 3 cut(s) 459, 721, 1301
BciT130I CCWGG 2 cut(s) 1677, 1904
BciVI GTATCC 1 cut(s) 1676
BclI TGATCA 2 cut(s) 34, 223
BcnI CCSGG 3 cut(s) 347, 348, 1157
BcoDI GTCTC 2 cut(s) 69, 920
BfaI CTAG 2 cut(s) 923, 1868
BfmI CTRYAG 1 cut(s) 69
BfuAI ACCTGC 2 cut(s) 1394, 2044
BfuI GTATCC 1 cut(s) 1676
BlpI GCTNAGC 1 cut(s) 1271
Bme1390I CCNGG 5 cut(s) 347, 348, 1157, 1677, 1904
Bme18I GGWCC 3 cut(s) 241, 973, 1420
BmeT110I CYCGRG 1 cut(s) 346
BmgBI CACGTC 1 cut(s) 561
BmgT120I GGNCC 3 cut(s) 241, 973, 1420
BmiI GGNNCC 6 cut(s) 105, 190, 556, 1711, 1780, 1997
BmrFI CCNGG 5 cut(s) 347, 348, 1157, 1677, 1904
BmsI GCATC 5 cut(s) 120, 410, 1339, 1956, 2048
BpiI GAAGAC 2 cut(s) 1439, 1975
BpmI CTGGAG 1 cut(s) 565
Bpu10I CCTNAGC 1 cut(s) 2063
Bpu1102I GCTNAGC 1 cut(s) 1271
Bpu14I TTCGAA 1 cut(s) 1598
BpuEI CTTGAG 3 cut(s) 432, 746, 1183
BpuMI CCSGG 3 cut(s) 347, 348, 1157
BsaAI YACGTR 2 cut(s) 313, 2032
BsaHI GRCGYC 1 cut(s) 1106
BsaJI CCNNGG 6 cut(s) 81, 271, 346, 347, 1764, 1962
BsaWI WCCGGW 1 cut(s) 1861
Bsc4I CCNNNNNNNGG 6 cut(s) 140, 526, 1126, 1806, 1807, 1868
Bse118I RCCGGY 1 cut(s) 1861
Bse1I ACTGG 5 cut(s) 49, 582, 1060, 1331, 2021
Bse3DI GCAATG 2 cut(s) 645, 1120
BseBI CCWGG 2 cut(s) 1677, 1904
BseDI CCNNGG 6 cut(s) 81, 271, 346, 347, 1764, 1962
BseGI GGATG 9 cut(s) 13, 149, 401, 412, 416, 858, 990, 1330, 2020
BseLI CCNNNNNNNGG 6 cut(s) 140, 526, 1126, 1806, 1807, 1868
BseMI GCAATG 2 cut(s) 645, 1120
BseNI ACTGG 5 cut(s) 49, 582, 1060, 1331, 2021
BseRI GAGGAG 2 cut(s) 981, 1995
BseSI GKGCMC 3 cut(s) 173, 1712, 1813
BseX3I CGGCCG 1 cut(s) 1209
BseXI GCAGC 4 cut(s) 55, 283, 328, 873
BsgI GTGCAG 1 cut(s) 335
Bsh1236I CGCG 3 cut(s) 97, 1214, 2049
Bsh1285I CGRYCG 1 cut(s) 1212
BshFI GGCC 8 cut(s) 309, 411, 605, 1007, 1119, 1188, 1211, 1484
BshNI GGYRCC 1 cut(s) 1709
BshTI ACCGGT 1 cut(s) 1861
BsiEI CGRYCG 1 cut(s) 1212
BsiHKAI GWGCWC 2 cut(s) 58, 173
BsiHKCI CYCGRG 1 cut(s) 346
BsiSI CCGG 5 cut(s) 186, 347, 1157, 1189, 1862
BslI CCNNNNNNNGG 6 cut(s) 140, 526, 1126, 1806, 1807, 1868
BsmAI GTCTC 2 cut(s) 69, 920
BsmBI CGTCTC 1 cut(s) 920
BsmI GAATGC 1 cut(s) 565
BsnI GGCC 8 cut(s) 309, 411, 605, 1007, 1119, 1188, 1211, 1484
BsoBI CYCGRG 1 cut(s) 346
Bsp119I TTCGAA 1 cut(s) 1598
Bsp1286I GDGCHC 5 cut(s) 58, 173, 1712, 1813, 1998
Bsp143I GATC 8 cut(s) 34, 103, 223, 554, 698, 955, 1285, 1508
Bsp1720I GCTNAGC 1 cut(s) 1271
Bsp19I CCATGG 1 cut(s) 1962
BspANI GGCC 8 cut(s) 309, 411, 605, 1007, 1119, 1188, 1211, 1484
BspFNI CGCG 3 cut(s) 97, 1214, 2049
BspHI TCATGA 2 cut(s) 58, 798
BspLI GGNNCC 6 cut(s) 105, 190, 556, 1711, 1780, 1997
BspMAI CTGCAG 1 cut(s) 73
BspMI ACCTGC 2 cut(s) 1394, 2044
BspPI GGATC 5 cut(s) 98, 111, 549, 562, 706
BspQI GCTCTTC 1 cut(s) 1509
BspT104I TTCGAA 1 cut(s) 1598
BspT107I GGYRCC 1 cut(s) 1709
BsrDI GCAATG 2 cut(s) 645, 1120
BsrFI RCCGGY 1 cut(s) 1861
BsrI ACTGG 5 cut(s) 49, 582, 1060, 1331, 2021
BssAI RCCGGY 1 cut(s) 1861
BssECI CCNNGG 6 cut(s) 81, 271, 346, 347, 1764, 1962
BssMI GATC 8 cut(s) 34, 103, 223, 554, 698, 955, 1285, 1508
BssNAI GTATAC 1 cut(s) 912
BssNI GRCGYC 1 cut(s) 1106
BssT1I CCWWGG 1 cut(s) 1962
Bst1107I GTATAC 1 cut(s) 912
Bst2UI CCWGG 2 cut(s) 1677, 1904
Bst4CI ACNGT 7 cut(s) 283, 882, 1181, 1688, 1765, 1924, 1981
Bst6I CTCTTC 4 cut(s) 1131, 1216, 1364, 1509
BstACI GRCGYC 1 cut(s) 1106
BstBAI YACGTR 2 cut(s) 313, 2032
BstBI TTCGAA 1 cut(s) 1598
BstC8I GCNNGC 6 cut(s) 17, 88, 409, 834, 1277, 1843
BstDEI CTNAG 4 cut(s) 245, 1271, 1335, 2063
BstDSI CCRYGG 3 cut(s) 271, 1764, 1962
BstENI CCTNNNNNAGG 1 cut(s) 138
BstF5I GGATG 9 cut(s) 13, 149, 401, 412, 416, 858, 990, 1330, 2020
BstFNI CGCG 3 cut(s) 97, 1214, 2049
BstHHI GCGC 3 cut(s) 99, 1216, 1257
BstKTI GATC 8 cut(s) 37, 106, 226, 557, 701, 958, 1288, 1511
BstMAI GTCTC 2 cut(s) 69, 920
BstMBI GATC 8 cut(s) 34, 103, 223, 554, 698, 955, 1285, 1508
BstMCI CGRYCG 1 cut(s) 1212
BstMWI GCNNNNNNNGC 8 cut(s) 96, 197, 404, 614, 644, 1276, 1532, 1913
BstNI CCWGG 2 cut(s) 1677, 1904
BstNSI RCATGY 4 cut(s) 198, 395, 500, 1103
BstSCI CCNGG 5 cut(s) 345, 346, 1155, 1675, 1902
BstSFI CTRYAG 1 cut(s) 69
BstSLI GKGCMC 3 cut(s) 173, 1712, 1813
BstSNI TACGTA 1 cut(s) 2032
BstUI CGCG 3 cut(s) 97, 1214, 2049
BstV1I GCAGC 4 cut(s) 55, 283, 328, 873
BstV2I GAAGAC 2 cut(s) 1439, 1975
BstX2I RGATCY 2 cut(s) 103, 554
BstXI CCANNNNNNTGG 1 cut(s) 1102
BstYI RGATCY 2 cut(s) 103, 554
BstZ17I GTATAC 1 cut(s) 912
BstZI CGGCCG 1 cut(s) 1209
BsuI GTATCC 1 cut(s) 1676
BsuRI GGCC 8 cut(s) 309, 411, 605, 1007, 1119, 1188, 1211, 1484
BtgI CCRYGG 3 cut(s) 271, 1764, 1962
BtgZI GCGATG 1 cut(s) 1784
BtrI CACGTC 1 cut(s) 561
BtsCI GGATG 9 cut(s) 13, 149, 401, 412, 416, 858, 990, 1330, 2020
BtsI GCAGTG 2 cut(s) 486, 783
BtsIMutI CAGTG 4 cut(s) 486, 783, 1916, 1929
BveI ACCTGC 2 cut(s) 1394, 2044
Cac8I GCNNGC 6 cut(s) 17, 88, 409, 834, 1277, 1843
CciI TCATGA 2 cut(s) 58, 798
CciNI GCGGCCGC 1 cut(s) 1209
CfoI GCGC 3 cut(s) 99, 1216, 1257
Cfr10I RCCGGY 1 cut(s) 1861
Cfr13I GGNCC 3 cut(s) 241, 973, 1420
Cfr9I CCCGGG 1 cut(s) 346
CseI GACGC 2 cut(s) 680, 1095
CsiI ACCWGGT 1 cut(s) 1675
Csp6I GTAC 2 cut(s) 1031, 2033
CspAI ACCGGT 1 cut(s) 1861
CspCI CAANNNNNGTGG 2 cut(s) 1620, 1655
CviQI GTAC 2 cut(s) 1031, 2033
DdeI CTNAG 4 cut(s) 245, 1271, 1335, 2063
DpnI GATC 8 cut(s) 36, 105, 225, 556, 700, 957, 1287, 1510
DpnII GATC 8 cut(s) 34, 103, 223, 554, 698, 955, 1285, 1508
DraI TTTAAA 1 cut(s) 1386
EaeI YGGCCR 3 cut(s) 409, 603, 1209
EagI CGGCCG 1 cut(s) 1209
Eam1104I CTCTTC 4 cut(s) 1131, 1216, 1364, 1509
EarI CTCTTC 4 cut(s) 1131, 1216, 1364, 1509
EclXI CGGCCG 1 cut(s) 1209
Eco105I TACGTA 1 cut(s) 2032
Eco130I CCWWGG 1 cut(s) 1962
Eco24I GRGCYC 1 cut(s) 1998
Eco47I GGWCC 3 cut(s) 241, 973, 1420
Eco52I CGGCCG 1 cut(s) 1209
Eco57I CTGAAG 1 cut(s) 1533
Eco72I CACGTG 1 cut(s) 313
Eco88I CYCGRG 1 cut(s) 346
EcoNI CCTNNNNNAGG 1 cut(s) 138
EcoRII CCWGG 2 cut(s) 1675, 1902
EcoT14I CCWWGG 1 cut(s) 1962
EcoT38I GRGCYC 1 cut(s) 1998
ErhI CCWWGG 1 cut(s) 1962
Esp3I CGTCTC 1 cut(s) 920
FalI AAGNNNNNCTT 4 cut(s) 578, 610, 1524, 1556
FauI CCCGC 1 cut(s) 829
FauNDI CATATG 1 cut(s) 734
FbaI TGATCA 2 cut(s) 34, 223
FblI GTMKAC 2 cut(s) 438, 911
FokI GGATG 9 cut(s) 20, 156, 388, 399, 403, 865, 997, 1317, 2027
FriOI GRGCYC 1 cut(s) 1998
FspBI CTAG 2 cut(s) 923, 1868
GlaI GCGC 3 cut(s) 98, 1215, 1256
GsuI CTGGAG 1 cut(s) 565
HaeIII GGCC 8 cut(s) 309, 411, 605, 1007, 1119, 1188, 1211, 1484
HapII CCGG 5 cut(s) 186, 347, 1157, 1189, 1862
HgaI GACGC 2 cut(s) 680, 1095
HhaI GCGC 3 cut(s) 99, 1216, 1257
Hin1I GRCGYC 1 cut(s) 1106
Hin6I GCGC 3 cut(s) 97, 1214, 1255
HinP1I GCGC 3 cut(s) 97, 1214, 1255
HincII GTYRAC 1 cut(s) 1632
HindII GTYRAC 1 cut(s) 1632
HindIII AAGCTT 1 cut(s) 1538
HinfI GANTC 7 cut(s) 589, 759, 947, 988, 1169, 1377, 1553
HpaII CCGG 5 cut(s) 186, 347, 1157, 1189, 1862
HphI GGTGA 3 cut(s) 281, 509, 1085
Hpy166II GTNNAC 5 cut(s) 171, 439, 758, 912, 1632
Hpy188I TCNGA 4 cut(s) 1238, 1464, 1513, 1582
Hpy8I GTNNAC 5 cut(s) 171, 439, 758, 912, 1632
Hpy99I CGWCG 2 cut(s) 565, 2108
HpyAV CCTTC 2 cut(s) 1100, 1178
HpyCH4III ACNGT 7 cut(s) 283, 882, 1181, 1688, 1765, 1924, 1981
HpyCH4IV ACGT 6 cut(s) 312, 458, 560, 1652, 1932, 2031
HpyF10VI GCNNNNNNNGC 8 cut(s) 96, 197, 404, 614, 644, 1276, 1532, 1913
HpyF3I CTNAG 4 cut(s) 245, 1271, 1335, 2063
HpySE526I ACGT 6 cut(s) 312, 458, 560, 1652, 1932, 2031
Hsp92I GRCGYC 1 cut(s) 1106
HspAI GCGC 3 cut(s) 97, 1214, 1255
Ksp22I TGATCA 2 cut(s) 34, 223
Kzo9I GATC 8 cut(s) 34, 103, 223, 554, 698, 955, 1285, 1508
LguI GCTCTTC 1 cut(s) 1509
LmnI GCTCC 5 cut(s) 188, 1507, 1784, 2001, 2008
Lsp1109I GCAGC 4 cut(s) 55, 283, 328, 873
LweI GCATC 5 cut(s) 120, 410, 1339, 1956, 2048
MabI ACCWGGT 1 cut(s) 1675
MaeI CTAG 2 cut(s) 923, 1868
MaeII ACGT 6 cut(s) 312, 458, 560, 1652, 1932, 2031
MaeIII GTNAC 5 cut(s) 1016, 1041, 1073, 1175, 1873
MalI GATC 8 cut(s) 36, 105, 225, 556, 700, 957, 1287, 1510
MboI GATC 8 cut(s) 34, 103, 223, 554, 698, 955, 1285, 1508
MfeI CAATTG 1 cut(s) 1794
MflI RGATCY 2 cut(s) 103, 554
MhlI GDGCHC 5 cut(s) 58, 173, 1712, 1813, 1998
MlsI TGGCCA 1 cut(s) 411
MluNI TGGCCA 1 cut(s) 411
MlyI GAGTC 5 cut(s) 583, 753, 982, 1178, 1386
MmeI TCCRAC 1 cut(s) 349
Mox20I TGGCCA 1 cut(s) 411
MroXI GAANNNNTTC 1 cut(s) 1140
MscI TGGCCA 1 cut(s) 411
MseI TTAA 7 cut(s) 462, 633, 861, 1227, 1344, 1385, 2070
MslI CAYNNNNRTG 5 cut(s) 98, 522, 797, 1100, 1368
Msp20I TGGCCA 1 cut(s) 411
MspA1I CMGCKG 3 cut(s) 407, 608, 953
MspI CCGG 5 cut(s) 186, 347, 1157, 1189, 1862
MspR9I CCNGG 5 cut(s) 347, 348, 1157, 1677, 1904
MunI CAATTG 1 cut(s) 1794
Mva1269I GAATGC 1 cut(s) 565
MvaI CCWGG 2 cut(s) 1677, 1904
MvnI CGCG 3 cut(s) 97, 1214, 2049
MwoI GCNNNNNNNGC 8 cut(s) 96, 197, 404, 614, 644, 1276, 1532, 1913
NciI CCSGG 3 cut(s) 347, 348, 1157
NcoI CCATGG 1 cut(s) 1962
NdeI CATATG 1 cut(s) 734
NdeII GATC 8 cut(s) 34, 103, 223, 554, 698, 955, 1285, 1508
NlaIV GGNNCC 6 cut(s) 105, 190, 556, 1711, 1780, 1997
NmuCI GTSAC 2 cut(s) 1073, 1175
NotI GCGGCCGC 1 cut(s) 1209
NspI RCATGY 4 cut(s) 198, 395, 500, 1103
NspV TTCGAA 1 cut(s) 1598
PagI TCATGA 2 cut(s) 58, 798
PciI ACATGT 3 cut(s) 194, 391, 1099
PciSI GCTCTTC 1 cut(s) 1509
PctI GAATGC 1 cut(s) 565
PdmI GAANNNNTTC 1 cut(s) 1140
PfeI GAWTC 2 cut(s) 947, 1553
PflMI CCANNNNNTGG 1 cut(s) 526
PinAI ACCGGT 1 cut(s) 1861
PleI GAGTC 5 cut(s) 583, 753, 982, 1177, 1385
PmaCI CACGTG 1 cut(s) 313
PmlI CACGTG 1 cut(s) 313
PpsI GAGTC 5 cut(s) 583, 753, 982, 1177, 1385
Ppu21I YACGTR 2 cut(s) 313, 2032
PscI ACATGT 3 cut(s) 194, 391, 1099
Psp1406I AACGTT 1 cut(s) 1652
Psp6I CCWGG 2 cut(s) 1675, 1902
PspCI CACGTG 1 cut(s) 313
PspGI CCWGG 2 cut(s) 1675, 1902
PspN4I GGNNCC 6 cut(s) 105, 190, 556, 1711, 1780, 1997
PspPI GGNCC 3 cut(s) 241, 973, 1420
PstI CTGCAG 1 cut(s) 73
PsuI RGATCY 2 cut(s) 103, 554
PvuII CAGCTG 1 cut(s) 953
RsaI GTAC 2 cut(s) 1032, 2034
RsaNI GTAC 2 cut(s) 1031, 2033
RseI CAYNNNNRTG 5 cut(s) 98, 522, 797, 1100, 1368
SapI GCTCTTC 1 cut(s) 1509
SaqAI TTAA 7 cut(s) 462, 633, 861, 1227, 1344, 1385, 2070
Sau3AI GATC 8 cut(s) 34, 103, 223, 554, 698, 955, 1285, 1508
Sau96I GGNCC 3 cut(s) 241, 973, 1420
SchI GAGTC 5 cut(s) 583, 753, 982, 1178, 1386
ScrFI CCNGG 5 cut(s) 347, 348, 1157, 1677, 1904
SduI GDGCHC 5 cut(s) 58, 173, 1712, 1813, 1998
SexAI ACCWGGT 1 cut(s) 1675
SfaNI GCATC 5 cut(s) 120, 410, 1339, 1956, 2048
SfcI CTRYAG 1 cut(s) 69
SfuI TTCGAA 1 cut(s) 1598
SinI GGWCC 3 cut(s) 241, 973, 1420
SmaI CCCGGG 1 cut(s) 348
SmiI ATTTAAAT 1 cut(s) 1386
SmiMI CAYNNNNRTG 5 cut(s) 98, 522, 797, 1100, 1368
SmlI CTYRAG 3 cut(s) 447, 761, 1162
SmoI CTYRAG 3 cut(s) 447, 761, 1162
SnaBI TACGTA 1 cut(s) 2032
SspI AATATT 2 cut(s) 217, 1195
SspMI CTAG 2 cut(s) 923, 1868
StyD4I CCNGG 5 cut(s) 345, 346, 1155, 1675, 1902
StyI CCWWGG 1 cut(s) 1962
SwaI ATTTAAAT 1 cut(s) 1386
TaaI ACNGT 7 cut(s) 283, 882, 1181, 1688, 1765, 1924, 1981
TaiI ACGT 6 cut(s) 315, 461, 563, 1655, 1935, 2034
TaqI TCGA 3 cut(s) 701, 1598, 2103
TauI GCSGC 7 cut(s) 401, 608, 1007, 1211, 1214, 1779, 2052
TfiI GAWTC 2 cut(s) 947, 1553
Tru1I TTAA 7 cut(s) 462, 633, 861, 1227, 1344, 1385, 2070
Tru9I TTAA 7 cut(s) 462, 633, 861, 1227, 1344, 1385, 2070
TscAI CASTG 4 cut(s) 493, 783, 1923, 1929
TseFI GTSAC 2 cut(s) 1073, 1175
TseI GCWGC 4 cut(s) 68, 296, 316, 886
Tsp45I GTSAC 2 cut(s) 1073, 1175
TspDTI ATGAA 4 cut(s) 480, 1190, 1577, 1975
TspGWI ACGGA 2 cut(s) 986, 1451
TspMI CCCGGG 1 cut(s) 346
TspRI CASTG 4 cut(s) 493, 783, 1923, 1929
Van91I CCANNNNNTGG 1 cut(s) 526
VneI GTGCAC 1 cut(s) 169
VpaK11BI GGWCC 3 cut(s) 241, 973, 1420
XagI CCTNNNNNAGG 1 cut(s) 138
XapI RAATTY 4 cut(s) 340, 1049, 1347, 1743
XceI RCATGY 4 cut(s) 198, 395, 500, 1103
XmaI CCCGGG 1 cut(s) 346
XmiI GTMKAC 2 cut(s) 438, 911
XmnI GAANNNNTTC 1 cut(s) 1140
XspI CTAG 2 cut(s) 923, 1868
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.