Rw5G025920

Ankyrin repeats (many copies)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
OG0000494
Physical Location & Seq
Forward (+)
37159411 .. 37161468
2058 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G025920.1

Sequence Viewer

Length: 1626 bp
ATGCATCAAAATCAAATCCAGGACAGTCATCTAACCGATCACTCAAAATTGTACCATCAGTTGTACAGGTATGCTAGTGAGGGAAGGCAAACTGACTTTATCACAGCTATTCAGAAGGTTGCAAATTGTGATCAAAATGCTTCGATTAAGCTCCTGTCCCGACTGAGCCCGCTGAATAACTCATTTCTTCACACAGCAGTGACTTTCGGGCATGTAAGTCTAGCCATCAAGATCATGAAGCTTCACCCGCCACTTTTGTTGGTTAAAAACTTTGAAGGTGACACTGCACTCCACGTTGCGGCCAAAACCGGAGGGGGTGATGATAACCTGATAAGATGTCCTAGGCATAATATCAAGAATGCGATTTACCGTAGAGCATTTAGAAGACGAGAAAGGGAGGACTCCACTTCATTGTGCAGCATCAACAGGTTATCTCGAAGGGCTTCGCTTTCTATTAAAATATGTTTATCCGATTCTCATCGAGCAGATAGTGGTGGCACCTTTCCAATCCATTCTGCATCAAGCAAAGGTCATGTTCCTATAGTTAAGCTGCTTCTTGAACATTATCCCGATTTAAAGGAATTGAGGAACTCGAGTGGAGAAAACATTCTTCATGTTGCAGCAAAGTGTGGCAGGGACAATCTTGTGAAATATTTTCTCGAGAAAGGTGAATTTAAGATGTTGATAAACCAAAAAAATAAAGCTGGAAATACTCCTTTACATTTGGCTACAATTTACCAACATCCAGCAGTTGTGAACATCCTGACTTGGGATAAAAGGACCAATTTGAAGCTCTTGAATGTAAGAGGCATGACAGCTCTTGATATTGCAGAAAATACTCTGGAAACTACTGCATCGTTCCACGGGAGGCTAGCATGGATAGCACTGAAATCAGCGGGTGCACAGCAAGCTCAACGTTATAATATTCCACTAAGGAAAACAGGACAGAATACAGAGCAAGAGTTGTTAGTTTCGGCAACTAAACCACTAGGAGGCAACGGTGGAGATGTCAGAACTAAAATTGAAGATGCTACGGACAGAGTTATAAATTCTTGTAACAATATTCAGTTAGTGTTACCAAACAAGCAAAGCAATAAGGACACAGTCAATACTCTTTTGGTGGTGACTACACTCATTGCCACAGTGTCGTTTGCAGCTGGTTTCACAATGCCAGGCGGCTACAATAACTCCGGCCCTCATGAGGGCACGGCAACTTTGCTAAATAAAGAAATGTTCCAAGTCTTCGTGATCTGCAACACACTTGCTATGTATAATTCTGTCCTTGTTGCAATCACTCTCATTTGGGCACAACTAGGGAATTTAAGCTTGGTGCCTCTTCGTATAGCATTGCCACTGTTGGGGCTCGCGCTTACAATGCTGTCCTTAGCATTCATGGCTGGAGTTTTTGTAGTAGTTAGTAGTCTTCAGTGGCTAGCTAGCGTTGTGATAATCATGGGTGTAGTTTTCCTTTTCACCGTGATAGTACTATTCACTCCACTCTTCTTCCCTTCCAAACTGTTCCCAACTACCTCCACTTTCCGTGTACGTCGTTACATCATCTATTATCCTTTCCGTTTGGCAGTACTGGTTTCTGGAAGTCACAAAGACTTTGAAGAAGAAGACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04310 map04310
Pfam Domains
Protein Families
Ank Ank_2 Ank_4 PGG

Protein Analysis

541

Amino Acids

60.07

Weight (kDa)

9.61

Isoelectric Point (pI)

37.8

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 158 - 224 1e-10 Ankyrin repeats (3 copies)
Ank_4 PF13637 170 - 220 1.9e-06 Ankyrin repeats (many copies)
Ank_KRIT1 PF24521 170 - 279 1e-05 KRIT1 ankyrin-repeats domain
Ank_5 PF13857 196 - 243 3.1e-08 Ankyrin repeats (many copies)
Ank_2 PF12796 200 - 259 2.9e-09 Ankyrin repeats (3 copies)
PGG PF13962 364 - 471 3.4e-29 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000494)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G03670 AT4G03440 AT4G03440 AT4G03440 AT4G03450 AT4G03450 AT4G03460 AT4G03460 AT4G03470 AT4G03480 AT4G03480 AT4G03490 AT4G03490 AT4G03490 AT4G03490 AT4G03490 AT4G03500 AT4G03500 AT4G03500 AT4G03505 AT4G05040 AT4G05040 AT4G05040 AT4G05040 AT4G05040 AT4G05040 AT4G05040 AT4G14390 AT4G14390 AT4G14390 AT4G14390 AT4G14400 AT4G14400 AT4G14400
fragaria_vesca FvH4_3g05910 FvH4_3g23320
malus_domestica MD03G1094000.v1.1 MD03G1094200.v1.1 MD03G1094600.v1.1 MD12G1218700.v1.1
prunus_persica Prupe.3G135100_v2.0.a1 Prupe.3G135200_v2.0.a1 Prupe.3G135700_v2.0.a1 Prupe.3G135700_v2.0.a1 Prupe.3G142400_v2.0.a1 Prupe.3G153800_v2.0.a1 Prupe.3G153800_v2.0.a1 Prupe.3G153800_v2.0.a1 Prupe.3G153800_v2.0.a1 Prupe.3G154000_v2.0.a1 Prupe.3G154200_v2.0.a1 Prupe.3G154200_v2.0.a1 Prupe.3G154600_v2.0.a1 Prupe.3G154700_v2.0.a1 Prupe.3G155200_v2.0.a1 Prupe.3G155300_v2.0.a1 Prupe.8G110300_v2.0.a1
pyrus_communis pycom03g07280 pycom03g07580 pycom03g07660 pycom03g07700 pycom03g07710
rosa_chinensis RchiOBHm_Chr3g0461161 RchiOBHm_Chr5g0041111
rosa_laevigata RLG00000023472 RLG00000023475 RLG00000034025
rosa_multiflora Rmu_co8126040.1_g000001 Rmu_co8268563.1_g000001 Rmu_sc0000964.1_g000014 Rmu_sc0028923.1_g000001 Rmu_sc0042194.1_g000001
rosa_roxburghii Rroxscaffold_1G00039610 Rroxscaffold_6G00401360
rosa_rugosa Rorug03G0048600 Rorug03G0048700 Rorug05G0190000
rosa_samantha Rh3AG105900 Rh3BG110200 Rh3BG268400 Rh3CG111800 Rh3DG111900 Rh5AG275800 Rh5BG280500 Rh5CG312600 Rh5DG288800
rosa_wichuraiana Rw3G009080 Rw5G025920

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 921, 1046
AccB1I GGYRCC 2 cut(s) 497, 1330
AccII CGCG 1 cut(s) 1367
AciI CCGC 5 cut(s) 170, 248, 299, 896, 1176
AclI AACGTT 1 cut(s) 916
AcoI YGGCCR 1 cut(s) 300
AcsI RAATTY 3 cut(s) 671, 1048, 1318
AcuI CTGAAG 1 cut(s) 1409
AfaI GTAC 5 cut(s) 53, 65, 1485, 1545, 1584
AfiI CCNNNNNNNGG 6 cut(s) 298, 769, 992, 1201, 1202, 1358
AgsI TTSAA 6 cut(s) 275, 560, 790, 799, 1025, 1613
AjnI CCWGG 2 cut(s) 18, 1171
AjuI GAANNNNNNNTTGG 2 cut(s) 1310, 1342
AleI CACNNNNGTG 1 cut(s) 197
Alw21I GWGCWC 1 cut(s) 904
Alw44I GTGCAC 1 cut(s) 900
Ama87I CYCGRG 2 cut(s) 592, 659
AoxI GGCC 2 cut(s) 300, 1192
ApaLI GTGCAC 1 cut(s) 900
ApeKI GCWGC 4 cut(s) 417, 550, 620, 1154
ApoI RAATTY 3 cut(s) 671, 1048, 1318
Asp700I GAANNNNTTC 2 cut(s) 442, 606
AspA2I CCTAGG 1 cut(s) 341
AspLEI GCGC 1 cut(s) 1369
AspS9I GGNCC 2 cut(s) 780, 1193
AsuHPI GGTGA 6 cut(s) 236, 290, 329, 680, 1135, 1465
AsuNHI GCTAGC 3 cut(s) 871, 1432, 1436
AvaI CYCGRG 2 cut(s) 592, 659
AvaII GGWCC 1 cut(s) 780
AvrII CCTAGG 1 cut(s) 341
BaeGI GKGCMC 3 cut(s) 904, 1208, 1309
BanI GGYRCC 2 cut(s) 497, 1330
BanII GRGCYC 2 cut(s) 170, 1365
BbsI GAAGAC 3 cut(s) 391, 1234, 1415
Bbv12I GWGCWC 1 cut(s) 904
BbvI GCAGC 4 cut(s) 429, 537, 632, 1166
BccI CCATC 2 cut(s) 63, 233
BceAI ACGGC 1 cut(s) 1224
BciT130I CCWGG 2 cut(s) 20, 1173
BclI TGATCA 1 cut(s) 130
BfaI CTAG 8 cut(s) 75, 221, 342, 872, 989, 1313, 1433, 1437
BfmI CTRYAG 1 cut(s) 540
BisI GCNGC 6 cut(s) 300, 418, 551, 621, 1155, 1177
BlnI CCTAGG 1 cut(s) 341
BlsI GCNGC 6 cut(s) 301, 419, 552, 622, 1156, 1178
BmcAI AGTACT 2 cut(s) 1485, 1584
Bme1390I CCNGG 2 cut(s) 20, 1173
Bme18I GGWCC 1 cut(s) 780
BmeT110I CYCGRG 2 cut(s) 592, 659
BmgT120I GGNCC 2 cut(s) 780, 1193
BmiI GGNNCC 2 cut(s) 499, 1332
BmrFI CCNGG 2 cut(s) 20, 1173
BmsI GCATC 5 cut(s) 13, 429, 527, 863, 1018
BmtI GCTAGC 3 cut(s) 875, 1436, 1440
BpiI GAAGAC 3 cut(s) 391, 1234, 1415
BpmI CTGGAG 1 cut(s) 1419
Bpu10I CCTNAGC 1 cut(s) 1384
BsaBI GATNNNNATC 1 cut(s) 477
BsaJI CCNNGG 2 cut(s) 341, 862
BsaWI WCCGGW 1 cut(s) 308
BsaXI ACNNNNNCTCC 4 cut(s) 1172, 1202, 1392, 1422
Bsc4I CCNNNNNNNGG 6 cut(s) 298, 769, 992, 1201, 1202, 1358
Bse1I ACTGG 1 cut(s) 1590
Bse3DI GCAATG 2 cut(s) 1134, 1346
Bse8I GATNNNNATC 1 cut(s) 477
BseBI CCWGG 2 cut(s) 20, 1173
BseDI CCNNGG 2 cut(s) 341, 862
BseGI GGATG 2 cut(s) 742, 759
BseJI GATNNNNATC 1 cut(s) 477
BseLI CCNNNNNNNGG 6 cut(s) 298, 769, 992, 1201, 1202, 1358
BseMI GCAATG 2 cut(s) 1134, 1346
BseMII CTCAG 1 cut(s) 155
BseNI ACTGG 1 cut(s) 1590
BseSI GKGCMC 3 cut(s) 904, 1208, 1309
BseXI GCAGC 4 cut(s) 429, 537, 632, 1166
BsgI GTGCAG 2 cut(s) 270, 436
Bsh1236I CGCG 1 cut(s) 1367
BshFI GGCC 2 cut(s) 302, 1194
BshNI GGYRCC 2 cut(s) 497, 1330
BsiHKAI GWGCWC 1 cut(s) 904
BsiHKCI CYCGRG 2 cut(s) 592, 659
BsiSI CCGG 2 cut(s) 309, 1191
BslFI GGGAC 2 cut(s) 142, 650
BslI CCNNNNNNNGG 6 cut(s) 298, 769, 992, 1201, 1202, 1358
BsmFI GGGAC 2 cut(s) 142, 650
BsmI GAATGC 2 cut(s) 364, 1388
BsnI GGCC 2 cut(s) 302, 1194
BsoBI CYCGRG 2 cut(s) 592, 659
Bsp1286I GDGCHC 5 cut(s) 170, 904, 1208, 1309, 1365
Bsp1407I TGTACA 1 cut(s) 63
Bsp143I GATC 4 cut(s) 37, 130, 231, 1248
BspACI CCGC 5 cut(s) 170, 248, 299, 896, 1176
BspANI GGCC 2 cut(s) 302, 1194
BspCNI CTCAG 1 cut(s) 156
BspFNI CGCG 1 cut(s) 1367
BspHI TCATGA 2 cut(s) 234, 1198
BspLI GGNNCC 2 cut(s) 499, 1332
BspOI GCTAGC 3 cut(s) 875, 1436, 1440
BspT107I GGYRCC 2 cut(s) 497, 1330
BsrDI GCAATG 2 cut(s) 1134, 1346
BsrGI TGTACA 1 cut(s) 63
BsrI ACTGG 1 cut(s) 1590
BssECI CCNNGG 2 cut(s) 341, 862
BssMI GATC 4 cut(s) 37, 130, 231, 1248
BssT1I CCWWGG 1 cut(s) 341
Bst2UI CCWGG 2 cut(s) 20, 1173
Bst4CI ACNGT 8 cut(s) 26, 371, 1001, 1105, 1144, 1356, 1477, 1518
Bst6I CTCTTC 2 cut(s) 1341, 1505
BstAUI TGTACA 1 cut(s) 63
BstC8I GCNNGC 6 cut(s) 170, 873, 909, 1365, 1434, 1438
BstDEI CTNAG 3 cut(s) 164, 932, 1384
BstDSI CCRYGG 1 cut(s) 862
BstF5I GGATG 2 cut(s) 742, 759
BstFNI CGCG 1 cut(s) 1367
BstHHI GCGC 1 cut(s) 1369
BstKTI GATC 4 cut(s) 40, 133, 234, 1251
BstMBI GATC 4 cut(s) 37, 130, 231, 1248
BstMWI GCNNNNNNNGC 5 cut(s) 247, 881, 908, 1375, 1394
BstNI CCWGG 2 cut(s) 20, 1173
BstNSI RCATGY 1 cut(s) 215
BstSCI CCNGG 2 cut(s) 18, 1171
BstSFI CTRYAG 1 cut(s) 540
BstSLI GKGCMC 3 cut(s) 904, 1208, 1309
BstUI CGCG 1 cut(s) 1367
BstV1I GCAGC 4 cut(s) 429, 537, 632, 1166
BstV2I GAAGAC 3 cut(s) 391, 1234, 1415
BsuRI GGCC 2 cut(s) 302, 1194
BtgI CCRYGG 1 cut(s) 862
BtsCI GGATG 2 cut(s) 742, 759
BtsI GCAGTG 2 cut(s) 204, 282
BtsIMutI CAGTG 6 cut(s) 204, 282, 884, 1149, 1352, 1433
Cac8I GCNNGC 6 cut(s) 170, 873, 909, 1365, 1434, 1438
CciI TCATGA 2 cut(s) 234, 1198
CfoI GCGC 1 cut(s) 1369
Cfr13I GGNCC 2 cut(s) 780, 1193
Csp6I GTAC 5 cut(s) 52, 64, 1484, 1544, 1583
CspCI CAANNNNNGTGG 2 cut(s) 240, 275
CviAII CATG 9 cut(s) 212, 235, 533, 614, 811, 876, 1199, 1393, 1453
CviQI GTAC 5 cut(s) 52, 64, 1484, 1544, 1583
DdeI CTNAG 3 cut(s) 164, 932, 1384
DpnI GATC 4 cut(s) 39, 132, 233, 1250
DpnII GATC 4 cut(s) 37, 130, 231, 1248
DraI TTTAAA 1 cut(s) 576
EaeI YGGCCR 1 cut(s) 300
Eam1104I CTCTTC 2 cut(s) 1341, 1505
EarI CTCTTC 2 cut(s) 1341, 1505
Eco130I CCWWGG 1 cut(s) 341
Eco24I GRGCYC 2 cut(s) 170, 1365
Eco47I GGWCC 1 cut(s) 780
Eco57I CTGAAG 1 cut(s) 1409
Eco88I CYCGRG 2 cut(s) 592, 659
EcoRII CCWGG 2 cut(s) 18, 1171
EcoT14I CCWWGG 1 cut(s) 341
EcoT22I ATGCAT 1 cut(s) 6
EcoT38I GRGCYC 2 cut(s) 170, 1365
ErhI CCWWGG 1 cut(s) 341
FaeI CATG 9 cut(s) 215, 238, 536, 617, 814, 879, 1202, 1396, 1456
FaqI GGGAC 2 cut(s) 142, 650
FatI CATG 9 cut(s) 211, 234, 532, 613, 810, 875, 1198, 1392, 1452
FauI CCCGC 3 cut(s) 177, 255, 889
FbaI TGATCA 1 cut(s) 130
Fnu4HI GCNGC 6 cut(s) 300, 418, 551, 621, 1155, 1177
FokI GGATG 2 cut(s) 729, 746
FriOI GRGCYC 2 cut(s) 170, 1365
Fsp4HI GCNGC 6 cut(s) 300, 418, 551, 621, 1155, 1177
FspBI CTAG 8 cut(s) 75, 221, 342, 872, 989, 1313, 1433, 1437
GlaI GCGC 1 cut(s) 1368
GluI GCNGC 6 cut(s) 300, 418, 551, 621, 1155, 1177
GsuI CTGGAG 1 cut(s) 1419
HaeIII GGCC 2 cut(s) 302, 1194
HapII CCGG 2 cut(s) 309, 1191
HhaI GCGC 1 cut(s) 1369
Hin1II CATG 9 cut(s) 215, 238, 536, 617, 814, 879, 1202, 1396, 1456
Hin6I GCGC 1 cut(s) 1367
HinP1I GCGC 1 cut(s) 1367
HindIII AAGCTT 2 cut(s) 239, 1324
HinfI GANTC 2 cut(s) 401, 473
HpaII CCGG 2 cut(s) 309, 1191
HphI GGTGA 6 cut(s) 236, 290, 329, 680, 1135, 1465
Hpy166II GTNNAC 3 cut(s) 757, 902, 1544
Hpy188I TCNGA 3 cut(s) 114, 472, 1013
Hpy8I GTNNAC 3 cut(s) 757, 902, 1544
Hpy99I CGWCG 1 cut(s) 1551
HpyAV CCTTC 5 cut(s) 78, 109, 269, 432, 1518
HpyCH4III ACNGT 8 cut(s) 26, 371, 1001, 1105, 1144, 1356, 1477, 1518
HpyCH4IV ACGT 3 cut(s) 294, 916, 1546
HpyF10VI GCNNNNNNNGC 5 cut(s) 247, 881, 908, 1375, 1394
HpyF3I CTNAG 3 cut(s) 164, 932, 1384
HpySE526I ACGT 3 cut(s) 294, 916, 1546
Hsp92II CATG 9 cut(s) 215, 238, 536, 617, 814, 879, 1202, 1396, 1456
HspAI GCGC 1 cut(s) 1367
Ksp22I TGATCA 1 cut(s) 130
Kzo9I GATC 4 cut(s) 37, 130, 231, 1248
LmnI GCTCC 1 cut(s) 156
Lsp1109I GCAGC 4 cut(s) 429, 537, 632, 1166
LweI GCATC 5 cut(s) 13, 429, 527, 863, 1018
MaeI CTAG 8 cut(s) 75, 221, 342, 872, 989, 1313, 1433, 1437
MaeII ACGT 3 cut(s) 294, 916, 1546
MaeIII GTNAC 7 cut(s) 199, 278, 1055, 1074, 1123, 1550, 1598
MalI GATC 4 cut(s) 39, 132, 233, 1250
MboI GATC 4 cut(s) 37, 130, 231, 1248
MhlI GDGCHC 5 cut(s) 170, 904, 1208, 1309, 1365
MlyI GAGTC 1 cut(s) 395
Mph1103I ATGCAT 1 cut(s) 6
MroXI GAANNNNTTC 2 cut(s) 442, 606
MseI TTAA 7 cut(s) 147, 264, 456, 546, 575, 675, 1322
MslI CAYNNNNRTG 1 cut(s) 197
MspA1I CMGCKG 3 cut(s) 172, 896, 1157
MspI CCGG 2 cut(s) 309, 1191
MspR9I CCNGG 2 cut(s) 20, 1173
Mva1269I GAATGC 2 cut(s) 364, 1388
MvaI CCWGG 2 cut(s) 20, 1173
MvnI CGCG 1 cut(s) 1367
MwoI GCNNNNNNNGC 5 cut(s) 247, 881, 908, 1375, 1394
NdeII GATC 4 cut(s) 37, 130, 231, 1248
NheI GCTAGC 3 cut(s) 871, 1432, 1436
NlaIII CATG 9 cut(s) 215, 238, 536, 617, 814, 879, 1202, 1396, 1456
NlaIV GGNNCC 2 cut(s) 499, 1332
NmuCI GTSAC 4 cut(s) 199, 278, 1123, 1598
NsiI ATGCAT 1 cut(s) 6
NspI RCATGY 1 cut(s) 215
OliI CACNNNNGTG 1 cut(s) 197
PaeR7I CTCGAG 2 cut(s) 592, 659
PagI TCATGA 2 cut(s) 234, 1198
PctI GAATGC 2 cut(s) 364, 1388
PdmI GAANNNNTTC 2 cut(s) 442, 606
PfeI GAWTC 1 cut(s) 473
PflFI GACNNNGTC 1 cut(s) 1103
PfoI TCCNGGA 1 cut(s) 18
PkrI GCNGC 6 cut(s) 301, 419, 552, 622, 1156, 1178
PleI GAGTC 1 cut(s) 395
PpsI GAGTC 1 cut(s) 395
PsiI TTATAA 2 cut(s) 921, 1046
Psp1406I AACGTT 1 cut(s) 916
Psp6I CCWGG 2 cut(s) 18, 1171
PspGI CCWGG 2 cut(s) 18, 1171
PspN4I GGNNCC 2 cut(s) 499, 1332
PspPI GGNCC 2 cut(s) 780, 1193
PspXI VCTCGAGB 1 cut(s) 592
PsyI GACNNNGTC 1 cut(s) 1103
PvuII CAGCTG 1 cut(s) 1157
RsaI GTAC 5 cut(s) 53, 65, 1485, 1545, 1584
RsaNI GTAC 5 cut(s) 52, 64, 1484, 1544, 1583
RseI CAYNNNNRTG 1 cut(s) 197
SaqAI TTAA 7 cut(s) 147, 264, 456, 546, 575, 675, 1322
SatI GCNGC 6 cut(s) 300, 418, 551, 621, 1155, 1177
Sau3AI GATC 4 cut(s) 37, 130, 231, 1248
Sau96I GGNCC 2 cut(s) 780, 1193
ScaI AGTACT 2 cut(s) 1485, 1584
SchI GAGTC 1 cut(s) 395
ScrFI CCNGG 2 cut(s) 20, 1173
SduI GDGCHC 5 cut(s) 170, 904, 1208, 1309, 1365
SfaNI GCATC 5 cut(s) 13, 429, 527, 863, 1018
SfcI CTRYAG 1 cut(s) 540
Sfr274I CTCGAG 2 cut(s) 592, 659
SinI GGWCC 1 cut(s) 780
SlaI CTCGAG 2 cut(s) 592, 659
SmiMI CAYNNNNRTG 1 cut(s) 197
SmlI CTYRAG 2 cut(s) 592, 659
SmoI CTYRAG 2 cut(s) 592, 659
SsiI CCGC 5 cut(s) 170, 248, 299, 896, 1176
SspI AATATT 3 cut(s) 653, 925, 1063
SspMI CTAG 8 cut(s) 75, 221, 342, 872, 989, 1313, 1433, 1437
StyD4I CCNGG 2 cut(s) 18, 1171
StyI CCWWGG 1 cut(s) 341
TaaI ACNGT 8 cut(s) 26, 371, 1001, 1105, 1144, 1356, 1477, 1518
TaiI ACGT 3 cut(s) 297, 919, 1549
TaqI TCGA 5 cut(s) 143, 436, 481, 593, 660
TatI WGTACW 3 cut(s) 63, 1483, 1582
TauI GCSGC 2 cut(s) 302, 1179
TfiI GAWTC 1 cut(s) 473
Tru1I TTAA 7 cut(s) 147, 264, 456, 546, 575, 675, 1322
Tru9I TTAA 7 cut(s) 147, 264, 456, 546, 575, 675, 1322
TscAI CASTG 6 cut(s) 204, 289, 891, 1149, 1359, 1433
TseFI GTSAC 4 cut(s) 199, 278, 1123, 1598
TseI GCWGC 4 cut(s) 417, 550, 620, 1154
Tsp45I GTSAC 4 cut(s) 199, 278, 1123, 1598
TspDTI ATGAA 4 cut(s) 251, 399, 602, 1381
TspGWI ACGGA 3 cut(s) 1049, 1529, 1562
TspRI CASTG 6 cut(s) 204, 289, 891, 1149, 1359, 1433
Tth111I GACNNNGTC 1 cut(s) 1103
VneI GTGCAC 1 cut(s) 900
VpaK11BI GGWCC 1 cut(s) 780
XapI RAATTY 3 cut(s) 671, 1048, 1318
XceI RCATGY 1 cut(s) 215
XhoI CTCGAG 2 cut(s) 592, 659
XmaJI CCTAGG 1 cut(s) 341
XmnI GAANNNNTTC 2 cut(s) 442, 606
XspI CTAG 8 cut(s) 75, 221, 342, 872, 989, 1313, 1433, 1437
ZrmI AGTACT 2 cut(s) 1485, 1584
Zsp2I ATGCAT 1 cut(s) 6
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.