pycom03g07710

ankyrin repeat-containing protein

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr3
Physical Location & Seq
Reverse (-)
6116165 .. 6117490
1326 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom03g07710.1

Sequence Viewer

Length: 393 bp
ATGAAAAGGACGGGAGAGGGAACACTGCGTTGCATGTCGCTGTGGAAAATAATCACCCAGATGTGGCTACGTTTTTTATCGGCAAAGATGGATCGATCGTCGCATTCTACAAATAACTCCAGTAAGACTCCCTTGTGCATGGCCGCTGAAACTGCCAATCTTGAACTCGTTAAAGCAATGGTAGCCAACACGCCAAATAGCAAGCAGACGATAATTCTGGTAATTTTTGGCAAGGATCGAACAGCAACTTCATTCTTCGTAGTGCGATCATATGGAGATATAGCAAAAGGTGGACTCAAGAAAATTAATGCGGTGTTCGTGTTGGCCATGCTCATAAGTACTCTTGCTATCATCAACAGATCCTCCCCAGTCACTATCACAGAATCCGATTAG
Functional Annotation

Protein Analysis

131

Amino Acids

14.3

Weight (kDa)

10.09

Isoelectric Point (pI)

46.45

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000494)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G03670 AT4G03440 AT4G03440 AT4G03440 AT4G03450 AT4G03450 AT4G03460 AT4G03460 AT4G03470 AT4G03480 AT4G03480 AT4G03490 AT4G03490 AT4G03490 AT4G03490 AT4G03490 AT4G03500 AT4G03500 AT4G03500 AT4G03505 AT4G05040 AT4G05040 AT4G05040 AT4G05040 AT4G05040 AT4G05040 AT4G05040 AT4G14390 AT4G14390 AT4G14390 AT4G14390 AT4G14400 AT4G14400 AT4G14400
fragaria_vesca FvH4_3g05910 FvH4_3g23320
malus_domestica MD03G1094000.v1.1 MD03G1094200.v1.1 MD03G1094600.v1.1 MD12G1218700.v1.1
prunus_persica Prupe.3G135100_v2.0.a1 Prupe.3G135200_v2.0.a1 Prupe.3G135700_v2.0.a1 Prupe.3G135700_v2.0.a1 Prupe.3G142400_v2.0.a1 Prupe.3G153800_v2.0.a1 Prupe.3G153800_v2.0.a1 Prupe.3G153800_v2.0.a1 Prupe.3G153800_v2.0.a1 Prupe.3G154000_v2.0.a1 Prupe.3G154200_v2.0.a1 Prupe.3G154200_v2.0.a1 Prupe.3G154600_v2.0.a1 Prupe.3G154700_v2.0.a1 Prupe.3G155200_v2.0.a1 Prupe.3G155300_v2.0.a1 Prupe.8G110300_v2.0.a1
pyrus_communis pycom03g07280 pycom03g07580 pycom03g07660 pycom03g07700 pycom03g07710
rosa_chinensis RchiOBHm_Chr3g0461161 RchiOBHm_Chr5g0041111
rosa_laevigata RLG00000023472 RLG00000023475 RLG00000034025
rosa_multiflora Rmu_co8126040.1_g000001 Rmu_co8268563.1_g000001 Rmu_sc0000964.1_g000014 Rmu_sc0028923.1_g000001 Rmu_sc0042194.1_g000001
rosa_roxburghii Rroxscaffold_1G00039610 Rroxscaffold_6G00401360
rosa_rugosa Rorug03G0048600 Rorug03G0048700 Rorug05G0190000
rosa_samantha Rh3AG105900 Rh3BG110200 Rh3BG268400 Rh3CG111800 Rh3DG111900 Rh5AG275800 Rh5BG280500 Rh5CG312600 Rh5DG288800
rosa_wichuraiana Rw3G009080 Rw5G025920

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 144, 311
AclWI GGATC 3 cut(s) 99, 243, 354
AcoI YGGCCR 2 cut(s) 141, 324
AfaI GTAC 1 cut(s) 340
AfiI CCNNNNNNNGG 1 cut(s) 63
AgsI TTSAA 1 cut(s) 164
AlwI GGATC 3 cut(s) 99, 243, 354
AoxI GGCC 2 cut(s) 141, 324
AseI ATTAAT 1 cut(s) 306
AsuHPI GGTGA 1 cut(s) 46
BalI TGGCCA 1 cut(s) 326
BccI CCATC 1 cut(s) 82
BisI GCNGC 1 cut(s) 144
BlsI GCNGC 1 cut(s) 145
BmcAI AGTACT 1 cut(s) 340
BmrI ACTGGG 1 cut(s) 362
BmuI ACTGGG 1 cut(s) 362
BpmI CTGGAG 1 cut(s) 103
BpuEI CTTGAG 1 cut(s) 281
Bsa29I ATCGAT 1 cut(s) 94
BsaXI ACNNNNNCTCC 2 cut(s) 347, 377
Bsc4I CCNNNNNNNGG 1 cut(s) 63
Bse1I ACTGG 2 cut(s) 120, 368
Bse3DI GCAATG 1 cut(s) 183
BseCI ATCGAT 1 cut(s) 94
BseLI CCNNNNNNNGG 1 cut(s) 63
BseMI GCAATG 1 cut(s) 183
BseNI ACTGG 2 cut(s) 120, 368
Bsh1285I CGRYCG 1 cut(s) 98
BshFI GGCC 2 cut(s) 143, 326
BshVI ATCGAT 1 cut(s) 94
BsiEI CGRYCG 1 cut(s) 98
BslI CCNNNNNNNGG 1 cut(s) 63
BsmI GAATGC 1 cut(s) 103
BsnI GGCC 2 cut(s) 143, 326
Bsp143I GATC 5 cut(s) 91, 95, 235, 266, 359
BspACI CCGC 2 cut(s) 144, 311
BspANI GGCC 2 cut(s) 143, 326
BspDI ATCGAT 1 cut(s) 94
BspPI GGATC 3 cut(s) 99, 243, 354
BsrDI GCAATG 1 cut(s) 183
BsrI ACTGG 2 cut(s) 120, 368
BssMI GATC 5 cut(s) 91, 95, 235, 266, 359
BstC8I GCNNGC 1 cut(s) 203
BstKTI GATC 5 cut(s) 94, 98, 238, 269, 362
BstMBI GATC 5 cut(s) 91, 95, 235, 266, 359
BstMCI CGRYCG 1 cut(s) 98
BstMWI GCNNNNNNNGC 2 cut(s) 152, 182
BstNSI RCATGY 1 cut(s) 37
BstX2I RGATCY 1 cut(s) 359
BstYI RGATCY 1 cut(s) 359
Bsu15I ATCGAT 1 cut(s) 94
BsuRI GGCC 2 cut(s) 143, 326
BsuTUI ATCGAT 1 cut(s) 94
BtsI GCAGTG 1 cut(s) 23
BtsIMutI CAGTG 1 cut(s) 23
Cac8I GCNNGC 1 cut(s) 203
ClaI ATCGAT 1 cut(s) 94
Csp6I GTAC 1 cut(s) 339
CviAII CATG 3 cut(s) 34, 139, 328
CviJI RGCY 4 cut(s) 67, 143, 185, 326
CviKI_1 RGCY 4 cut(s) 67, 143, 185, 326
CviQI GTAC 1 cut(s) 339
DpnI GATC 5 cut(s) 93, 97, 237, 268, 361
DpnII GATC 5 cut(s) 91, 95, 235, 266, 359
EaeI YGGCCR 2 cut(s) 141, 324
FaeI CATG 3 cut(s) 37, 142, 331
FaiI YATR 7 cut(s) 35, 140, 271, 273, 281, 329, 335
FalI AAGNNNNNCTT 2 cut(s) 116, 148
FatI CATG 3 cut(s) 33, 138, 327
FauNDI CATATG 1 cut(s) 271
Fnu4HI GCNGC 1 cut(s) 144
Fsp4HI GCNGC 1 cut(s) 144
GluI GCNGC 1 cut(s) 144
GsuI CTGGAG 1 cut(s) 103
HaeIII GGCC 2 cut(s) 143, 326
Hin1II CATG 3 cut(s) 37, 142, 331
HinfI GANTC 3 cut(s) 127, 294, 383
HphI GGTGA 1 cut(s) 46
Hpy166II GTNNAC 1 cut(s) 293
Hpy188I TCNGA 1 cut(s) 388
Hpy188III TCNNGA 2 cut(s) 161, 298
Hpy8I GTNNAC 1 cut(s) 293
Hpy99I CGWCG 1 cut(s) 103
HpyCH4IV ACGT 1 cut(s) 70
HpyCH4V TGCA 2 cut(s) 33, 138
HpyF10VI GCNNNNNNNGC 2 cut(s) 152, 182
HpySE526I ACGT 1 cut(s) 70
Hsp92II CATG 3 cut(s) 37, 142, 331
Kzo9I GATC 5 cut(s) 91, 95, 235, 266, 359
LpnPI CCDG 4 cut(s) 71, 133, 203, 381
MaeII ACGT 1 cut(s) 70
MaeIII GTNAC 1 cut(s) 370
MalI GATC 5 cut(s) 93, 97, 237, 268, 361
MboI GATC 5 cut(s) 91, 95, 235, 266, 359
MboII GAAGA 1 cut(s) 247
MflI RGATCY 1 cut(s) 359
MlsI TGGCCA 1 cut(s) 326
MluCI AATT 3 cut(s) 213, 222, 303
MluNI TGGCCA 1 cut(s) 326
MlyI GAGTC 2 cut(s) 121, 288
MnlI CCTC 2 cut(s) 10, 373
Mox20I TGGCCA 1 cut(s) 326
MscI TGGCCA 1 cut(s) 326
MseI TTAA 2 cut(s) 171, 306
MslI CAYNNNNRTG 1 cut(s) 59
Msp20I TGGCCA 1 cut(s) 326
MspA1I CMGCKG 1 cut(s) 146
Mva1269I GAATGC 1 cut(s) 103
MwoI GCNNNNNNNGC 2 cut(s) 152, 182
NdeI CATATG 1 cut(s) 271
NdeII GATC 5 cut(s) 91, 95, 235, 266, 359
NlaIII CATG 3 cut(s) 37, 142, 331
NmuCI GTSAC 1 cut(s) 370
NspI RCATGY 1 cut(s) 37
PctI GAATGC 1 cut(s) 103
PfeI GAWTC 1 cut(s) 383
PkrI GCNGC 1 cut(s) 145
Ple19I CGATCG 1 cut(s) 98
PleI GAGTC 2 cut(s) 121, 288
PpsI GAGTC 2 cut(s) 121, 288
PshBI ATTAAT 1 cut(s) 306
PsuI RGATCY 1 cut(s) 359
PvuI CGATCG 1 cut(s) 98
RsaI GTAC 1 cut(s) 340
RsaNI GTAC 1 cut(s) 339
RseI CAYNNNNRTG 1 cut(s) 59
SaqAI TTAA 2 cut(s) 171, 306
SatI GCNGC 1 cut(s) 144
Sau3AI GATC 5 cut(s) 91, 95, 235, 266, 359
ScaI AGTACT 1 cut(s) 340
SchI GAGTC 2 cut(s) 121, 288
SetI ASST 2 cut(s) 73, 292
SmiMI CAYNNNNRTG 1 cut(s) 59
SmlI CTYRAG 1 cut(s) 296
SmoI CTYRAG 1 cut(s) 296
Sse9I AATT 3 cut(s) 213, 222, 303
SsiI CCGC 2 cut(s) 144, 311
TaiI ACGT 1 cut(s) 73
TaqI TCGA 2 cut(s) 94, 238
TasI AATT 3 cut(s) 213, 222, 303
TatI WGTACW 1 cut(s) 338
TauI GCSGC 1 cut(s) 146
TfiI GAWTC 1 cut(s) 383
Tru1I TTAA 2 cut(s) 171, 306
Tru9I TTAA 2 cut(s) 171, 306
TscAI CASTG 1 cut(s) 30
TseFI GTSAC 1 cut(s) 370
Tsp45I GTSAC 1 cut(s) 370
TspDTI ATGAA 2 cut(s) 17, 240
TspRI CASTG 1 cut(s) 30
VspI ATTAAT 1 cut(s) 306
XceI RCATGY 1 cut(s) 37
ZrmI AGTACT 1 cut(s) 340
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.