MD03G1094000.v1.1

ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr03
OG0000494
Physical Location & Seq
Reverse (-)
7843826 .. 7846570
2745 bp
Loading structure...
UTR
Exon/CDS
Intron
MD03G1094000.v1.1.491

Sequence Viewer

Length: 1680 bp
ATGCGCACAAAGTATTTTGCCGGAGCCACATGTGCAATACTTATATGTAATATTCCTGATCAAATAGTATCGCTGGTCCTAAGTAGTGAAAACAAAGTAAGCATCCGTGGGAACACGGTGCTTCACCTTCCTGCAAATACAGGCCACGTGAAGCTTATCCAACTAATTACCGTAAATTTTCCGGGGCTTGTCCGCAAAAAAATTGATGATGGAGAACTTCCGCTTCATGTAGCTGCATCCGCTGGCCATCTATCCGCAGTTCATTGTTTGGTAGACACGGCTCAAGGTGATACGTTTAATGAAAAGGACAGGAGAGGAAACACTGCGTTGCATGTCGCTGTGGAAAATAATCATCAAGATGTGGCTATGTTTTTGGTCGGCAAAGATGGATCCACGTCGCATTCTACAAATAACTTCAGTAAGACTCCCTTGTGCATGGCTGCTGAAACTGCCAATTTTGAACTCGTTAAAGCAATGGTAGCCAACACGCCAAATAGCACAGCAGACGTTAATTCTGGTAATTTTTGGCAAGGATCGAACGGCAATTCAATTCTTCGTAGTGCGATCATATGGAGGAAACAGGGAAGAAGGGATCCAGAGAGGATCCCTTTCCATTTCTCTCTTCATAAATACTTATTCTTGACAGAGTTGCTTCTAAAATGCATATGCTACGTAGATCTCCTAGAGACGATATTGAGCAAAATGGATTCAGCTGACCTAATCAATTCAACGGAACAAGAGTGGATGATTCCTCTTACACTTGCGGCTTATATAAGTAACTTCGTGGCGGTACGCGTATTGTTACACAAATTTACTGGATTGGCATACAAAGGTGACGAAAATCAGTTCCTTCCCATACATGTGGCGTCCAAAAAAGGCCATTGCAGGATTGTTGAAGAGTTTCTCAATCATTGCCCCGACTTGAGGGAGTCATGTGACGGTGAAGGCCGGAATATTCTTCATGTTGCGGCCGCGCATGGAAGAGTTAATGTTGTCCAATATATTGTTGGAAAGCGCAATCTTCAAGTGCTTAGCAAGCAAAGAGATCAAAGTGGAAATACCCCTCTACACATAGCCGTCCAAAACTGGCATCCTAAGATTGTCAAAATTCTTTCCCCCTTCCATGCGCATGAGAGAGCCAATTTAAATAGTTTGAACAATGCAGGTATGACGGCATTGGACCTTGCAGAGAAGACCGAGGTAGATAAAGAGATGTTGTTTCGGAGAGTACCGAACAGCCACCAAAGCAAATCTAGTGATAGAGGATTCTGTTCTGAAGTCCTTGCACAATCTGATAGCCTAATGTTTTCGAAAGAGAGTGTCAATACTCTCCTATTGGTGTCAACGCTGGTGGCTGGTATAACGTTTGTTCAAGGCTTCACAATACCATGTGGATACAGTAGCTCTGGAAATGATGTGGGCACCCCAATTTTTCTTACGCATATCCTATTCAAAATTTTCTTGATATGCAATACCGTGGCGATGTGCGGCTCCATTACTGCTTCAATTGCCCTTATGTGGGCACAAACGCATGACCCTAGTATAATCTATGCTGCCTTGAGGTTTACCTTACCGGCGCCAGGTGTAACGCTTACCATGTTGTCCTCGTCATTCCTGGCTGGTGTTGCACTGACAGTGTATCACGTTTTATGGCTTCGCATCTTTTTTTATGCCATGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001101 GO:0002376 GO:0002831 GO:0002833 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0005886 GO:0005887 GO:0006464 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0008152 GO:0008219 GO:0009266 GO:0009314 GO:0009409 GO:0009416 GO:0009605 GO:0009607 GO:0009615 GO:0009617 GO:0009628 GO:0009719 GO:0009725 GO:0009751 GO:0009814 GO:0009816 GO:0009966 GO:0009987 GO:0010033 GO:0010646 GO:0012505 GO:0014070 GO:0016020 GO:0016021 GO:0016567 GO:0019538 GO:0023051 GO:0030176 GO:0031224 GO:0031226 GO:0031227 GO:0031347 GO:0031349 GO:0031984 GO:0032101 GO:0032103 GO:0032446 GO:0032870 GO:0035690 GO:0036211 GO:0042175 GO:0042221 GO:0042493 GO:0042742 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043900 GO:0043902 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044459 GO:0044464 GO:0045087 GO:0046677 GO:0048518 GO:0048583 GO:0048584 GO:0050789 GO:0050794 GO:0050826 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0065007 GO:0070647 GO:0070887 GO:0071229 GO:0071236 GO:0071310 GO:0071407 GO:0071446 GO:0071495 GO:0071704 GO:0071944 GO:0080134 GO:0098542 GO:0098827 GO:1900150 GO:1900424 GO:1900426 GO:1901564 GO:1901700 GO:1901701 GO:1902288 GO:1902290 GO:2000031 GO:2001023 GO:2001038
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank Ank_2 Ank_4 PGG

Protein Analysis

560

Amino Acids

61.61

Weight (kDa)

8.35

Isoelectric Point (pI)

31.55

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 67 - 128 2.8e-11 Ankyrin repeats (3 copies)
Ank_2 PF12796 253 - 338 7.1e-09 Ankyrin repeats (3 copies)
Ank_2 PF12796 286 - 372 1.3e-14 Ankyrin repeats (3 copies)
Ank_4 PF13637 286 - 334 3.8e-06 Ankyrin repeats (many copies)
Ank_4 PF13637 320 - 371 9.2e-07 Ankyrin repeats (many copies)
Ank_2 PF12796 347 - 396 5.7e-06 Ankyrin repeats (3 copies)
PGG PF13962 438 - 543 4.9e-19 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000494)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G03670 AT4G03440 AT4G03440 AT4G03440 AT4G03450 AT4G03450 AT4G03460 AT4G03460 AT4G03470 AT4G03480 AT4G03480 AT4G03490 AT4G03490 AT4G03490 AT4G03490 AT4G03490 AT4G03500 AT4G03500 AT4G03500 AT4G03505 AT4G05040 AT4G05040 AT4G05040 AT4G05040 AT4G05040 AT4G05040 AT4G05040 AT4G14390 AT4G14390 AT4G14390 AT4G14390 AT4G14400 AT4G14400 AT4G14400
fragaria_vesca FvH4_3g05910 FvH4_3g23320
malus_domestica MD03G1094000.v1.1 MD03G1094200.v1.1 MD03G1094600.v1.1 MD12G1218700.v1.1
prunus_persica Prupe.3G135100_v2.0.a1 Prupe.3G135200_v2.0.a1 Prupe.3G135700_v2.0.a1 Prupe.3G135700_v2.0.a1 Prupe.3G142400_v2.0.a1 Prupe.3G153800_v2.0.a1 Prupe.3G153800_v2.0.a1 Prupe.3G153800_v2.0.a1 Prupe.3G153800_v2.0.a1 Prupe.3G154000_v2.0.a1 Prupe.3G154200_v2.0.a1 Prupe.3G154200_v2.0.a1 Prupe.3G154600_v2.0.a1 Prupe.3G154700_v2.0.a1 Prupe.3G155200_v2.0.a1 Prupe.3G155300_v2.0.a1 Prupe.8G110300_v2.0.a1
pyrus_communis pycom03g07280 pycom03g07580 pycom03g07660 pycom03g07700 pycom03g07710
rosa_chinensis RchiOBHm_Chr3g0461161 RchiOBHm_Chr5g0041111
rosa_laevigata RLG00000023472 RLG00000023475 RLG00000034025
rosa_multiflora Rmu_co8126040.1_g000001 Rmu_co8268563.1_g000001 Rmu_sc0000964.1_g000014 Rmu_sc0028923.1_g000001 Rmu_sc0042194.1_g000001
rosa_roxburghii Rroxscaffold_1G00039610 Rroxscaffold_6G00401360
rosa_rugosa Rorug03G0048600 Rorug03G0048700 Rorug05G0190000
rosa_samantha Rh3AG105900 Rh3BG110200 Rh3BG268400 Rh3CG111800 Rh3DG111900 Rh5AG275800 Rh5BG280500 Rh5CG312600 Rh5DG288800
rosa_wichuraiana Rw3G009080 Rw5G025920

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 2 cut(s) 5, 1128
Acc36I ACCTGC 1 cut(s) 1154
AccB1I GGYRCC 2 cut(s) 1421, 1576
AccI GTMKAC 1 cut(s) 273
AccII CGCG 2 cut(s) 795, 974
AciI CCGC 9 cut(s) 193, 221, 240, 255, 764, 788, 968, 972, 1488
AclI AACGTT 1 cut(s) 1364
AclWI GGATC 7 cut(s) 384, 397, 541, 587, 598, 600, 611
AcoI YGGCCR 2 cut(s) 244, 969
AcsI RAATTY 4 cut(s) 175, 809, 1107, 1455
AcuI CTGAAG 2 cut(s) 400, 1296
AcvI CACGTG 1 cut(s) 148
AcyI GRCGYC 2 cut(s) 866, 1577
AfaI GTAC 2 cut(s) 792, 1230
AfiI CCNNNNNNNGG 4 cut(s) 924, 1518, 1519, 1580
AflIII ACRYGT 3 cut(s) 29, 793, 859
AgsI TTSAA 9 cut(s) 461, 549, 729, 896, 1025, 1156, 1373, 1453, 1506
AjiI CACGTC 1 cut(s) 396
AjnI CCWGG 2 cut(s) 1579, 1614
AluBI AGCT 4 cut(s) 154, 233, 713, 1404
AluI AGCT 4 cut(s) 154, 233, 713, 1404
Alw26I GTCTC 1 cut(s) 680
AlwI GGATC 7 cut(s) 384, 397, 541, 587, 598, 600, 611
AoxI GGCC 5 cut(s) 142, 244, 877, 946, 969
ApeKI GCWGC 3 cut(s) 233, 440, 1553
ApoI RAATTY 4 cut(s) 175, 809, 1107, 1455
Asp700I GAANNNNTTC 1 cut(s) 900
AspLEI GCGC 5 cut(s) 6, 976, 1017, 1129, 1579
AspS9I GGNCC 2 cut(s) 76, 1180
AsuC2I CCSGG 1 cut(s) 183
AsuHPI GGTGA 4 cut(s) 116, 299, 845, 953
AsuII TTCGAA 1 cut(s) 1310
AvaII GGWCC 2 cut(s) 76, 1180
BaeGI GKGCMC 2 cut(s) 1424, 1525
BalI TGGCCA 1 cut(s) 246
BamHI GGATCC 3 cut(s) 389, 592, 603
BanI GGYRCC 2 cut(s) 1421, 1576
BbrPI CACGTG 1 cut(s) 148
BbsI GAAGAC 1 cut(s) 1199
BbvI GCAGC 3 cut(s) 220, 427, 1540
BccI CCATC 3 cut(s) 203, 255, 380
BceAI ACGGC 4 cut(s) 294, 556, 1061, 1188
BciT130I CCWGG 2 cut(s) 1581, 1616
BciVI GTATCC 1 cut(s) 1388
BclI TGATCA 1 cut(s) 58
BcnI CCSGG 1 cut(s) 183
BcoDI GTCTC 1 cut(s) 680
BfaI CTAG 3 cut(s) 683, 1254, 1539
BfoI RGCGCY 1 cut(s) 1580
BfuAI ACCTGC 1 cut(s) 1154
BfuI GTATCC 1 cut(s) 1388
BglII AGATCT 1 cut(s) 676
BisI GCNGC 7 cut(s) 234, 441, 765, 969, 972, 1489, 1554
BlpI GCTNAGC 1 cut(s) 1031
BlsI GCNGC 7 cut(s) 235, 442, 766, 970, 973, 1490, 1555
Bme1390I CCNGG 3 cut(s) 183, 1581, 1616
Bme18I GGWCC 2 cut(s) 76, 1180
BmgBI CACGTC 1 cut(s) 396
BmgT120I GGNCC 2 cut(s) 76, 1180
BmiI GGNNCC 7 cut(s) 25, 391, 594, 605, 1423, 1492, 1578
BmrFI CCNGG 3 cut(s) 183, 1581, 1616
BmsI GCATC 4 cut(s) 111, 245, 1099, 1668
BpiI GAAGAC 1 cut(s) 1199
Bpu1102I GCTNAGC 1 cut(s) 1031
Bpu14I TTCGAA 1 cut(s) 1310
BpuEI CTTGAG 3 cut(s) 267, 943, 1579
BpuMI CCSGG 1 cut(s) 183
BsaAI YACGTR 2 cut(s) 148, 673
BsaHI GRCGYC 2 cut(s) 866, 1577
BsaJI CCNNGG 4 cut(s) 106, 182, 1197, 1476
Bsc4I CCNNNNNNNGG 4 cut(s) 924, 1518, 1519, 1580
Bse118I RCCGGY 1 cut(s) 1573
Bse1I ACTGG 2 cut(s) 820, 1091
Bse3DI GCAATG 3 cut(s) 480, 880, 910
BseBI CCWGG 2 cut(s) 1581, 1616
BseDI CCNNGG 4 cut(s) 106, 182, 1197, 1476
BseGI GGATG 4 cut(s) 102, 236, 750, 1090
BseLI CCNNNNNNNGG 4 cut(s) 924, 1518, 1519, 1580
BseMI GCAATG 3 cut(s) 480, 880, 910
BseNI ACTGG 2 cut(s) 820, 1091
BseSI GKGCMC 2 cut(s) 1424, 1525
BseX3I CGGCCG 1 cut(s) 969
BseXI GCAGC 3 cut(s) 220, 427, 1540
Bsh1236I CGCG 2 cut(s) 795, 974
Bsh1285I CGRYCG 1 cut(s) 972
BshFI GGCC 5 cut(s) 144, 246, 879, 948, 971
BshNI GGYRCC 2 cut(s) 1421, 1576
BsiEI CGRYCG 1 cut(s) 972
BsiSI CCGG 4 cut(s) 21, 182, 949, 1574
BslI CCNNNNNNNGG 4 cut(s) 924, 1518, 1519, 1580
BsmAI GTCTC 1 cut(s) 680
BsmBI CGTCTC 1 cut(s) 680
BsmI GAATGC 1 cut(s) 400
BsnI GGCC 5 cut(s) 144, 246, 879, 948, 971
Bsp119I TTCGAA 1 cut(s) 1310
Bsp1286I GDGCHC 2 cut(s) 1424, 1525
Bsp143I GATC 8 cut(s) 58, 389, 533, 564, 592, 603, 676, 1045
Bsp1720I GCTNAGC 1 cut(s) 1031
BspACI CCGC 9 cut(s) 193, 221, 240, 255, 764, 788, 968, 972, 1488
BspANI GGCC 5 cut(s) 144, 246, 879, 948, 971
BspFNI CGCG 2 cut(s) 795, 974
BspLI GGNNCC 7 cut(s) 25, 391, 594, 605, 1423, 1492, 1578
BspMI ACCTGC 1 cut(s) 1154
BspPI GGATC 7 cut(s) 384, 397, 541, 587, 598, 600, 611
BspT104I TTCGAA 1 cut(s) 1310
BspT107I GGYRCC 2 cut(s) 1421, 1576
BsrDI GCAATG 3 cut(s) 480, 880, 910
BsrFI RCCGGY 1 cut(s) 1573
BsrI ACTGG 2 cut(s) 820, 1091
BssAI RCCGGY 1 cut(s) 1573
BssECI CCNNGG 4 cut(s) 106, 182, 1197, 1476
BssMI GATC 8 cut(s) 58, 389, 533, 564, 592, 603, 676, 1045
BssNI GRCGYC 2 cut(s) 866, 1577
Bst2UI CCWGG 2 cut(s) 1581, 1616
Bst4CI ACNGT 6 cut(s) 118, 172, 941, 1400, 1477, 1636
Bst6I CTCTTC 3 cut(s) 627, 891, 976
BstACI GRCGYC 2 cut(s) 866, 1577
BstBAI YACGTR 2 cut(s) 148, 673
BstBI TTCGAA 1 cut(s) 1310
BstC8I GCNNGC 2 cut(s) 244, 1037
BstDEI CTNAG 3 cut(s) 80, 1031, 1095
BstDSI CCRYGG 2 cut(s) 106, 1476
BstF5I GGATG 4 cut(s) 102, 236, 750, 1090
BstFNI CGCG 2 cut(s) 795, 974
BstH2I RGCGCY 1 cut(s) 1580
BstHHI GCGC 5 cut(s) 6, 976, 1017, 1129, 1579
BstKTI GATC 8 cut(s) 61, 392, 536, 567, 595, 606, 679, 1048
BstMAI GTCTC 1 cut(s) 680
BstMBI GATC 8 cut(s) 58, 389, 533, 564, 592, 603, 676, 1045
BstMCI CGRYCG 1 cut(s) 972
BstMWI GCNNNNNNNGC 8 cut(s) 32, 239, 449, 479, 1036, 1245, 1508, 1625
BstNI CCWGG 2 cut(s) 1581, 1616
BstNSI RCATGY 3 cut(s) 33, 335, 863
BstSCI CCNGG 3 cut(s) 181, 1579, 1614
BstSLI GKGCMC 2 cut(s) 1424, 1525
BstSNI TACGTA 1 cut(s) 673
BstUI CGCG 2 cut(s) 795, 974
BstV1I GCAGC 3 cut(s) 220, 427, 1540
BstV2I GAAGAC 1 cut(s) 1199
BstX2I RGATCY 4 cut(s) 389, 592, 603, 676
BstXI CCANNNNNNTGG 1 cut(s) 862
BstYI RGATCY 4 cut(s) 389, 592, 603, 676
BstZI CGGCCG 1 cut(s) 969
BsuI GTATCC 1 cut(s) 1388
BsuRI GGCC 5 cut(s) 144, 246, 879, 948, 971
BtgI CCRYGG 2 cut(s) 106, 1476
BtgZI GCGATG 1 cut(s) 1496
BtrI CACGTC 1 cut(s) 396
BtsCI GGATG 4 cut(s) 102, 236, 750, 1090
BtsI GCAGTG 1 cut(s) 321
BtsIMutI CAGTG 3 cut(s) 321, 1628, 1641
BveI ACCTGC 1 cut(s) 1154
Cac8I GCNNGC 2 cut(s) 244, 1037
CciNI GCGGCCGC 1 cut(s) 969
CfoI GCGC 5 cut(s) 6, 976, 1017, 1129, 1579
Cfr10I RCCGGY 1 cut(s) 1573
Cfr13I GGNCC 2 cut(s) 76, 1180
CseI GACGC 1 cut(s) 855
Csp6I GTAC 2 cut(s) 791, 1229
CspCI CAANNNNNGTGG 2 cut(s) 1332, 1367
CviQI GTAC 2 cut(s) 791, 1229
DdeI CTNAG 3 cut(s) 80, 1031, 1095
DinI GGCGCC 1 cut(s) 1578
DpnI GATC 8 cut(s) 60, 391, 535, 566, 594, 605, 678, 1047
DpnII GATC 8 cut(s) 58, 389, 533, 564, 592, 603, 676, 1045
DraI TTTAAA 1 cut(s) 1146
EaeI YGGCCR 2 cut(s) 244, 969
EagI CGGCCG 1 cut(s) 969
Eam1104I CTCTTC 3 cut(s) 627, 891, 976
EarI CTCTTC 3 cut(s) 627, 891, 976
EclXI CGGCCG 1 cut(s) 969
Eco105I TACGTA 1 cut(s) 673
Eco47I GGWCC 2 cut(s) 76, 1180
Eco52I CGGCCG 1 cut(s) 969
Eco57I CTGAAG 2 cut(s) 400, 1296
Eco72I CACGTG 1 cut(s) 148
EcoRII CCWGG 2 cut(s) 1579, 1614
EcoT22I ATGCAT 1 cut(s) 665
EgeI GGCGCC 1 cut(s) 1578
EheI GGCGCC 1 cut(s) 1578
Esp3I CGTCTC 1 cut(s) 680
FalI AAGNNNNNCTT 2 cut(s) 413, 445
FauNDI CATATG 2 cut(s) 569, 665
FbaI TGATCA 1 cut(s) 58
FblI GTMKAC 1 cut(s) 273
Fnu4HI GCNGC 7 cut(s) 234, 441, 765, 969, 972, 1489, 1554
FokI GGATG 4 cut(s) 89, 223, 757, 1077
Fsp4HI GCNGC 7 cut(s) 234, 441, 765, 969, 972, 1489, 1554
FspAI RTGCGCAY 2 cut(s) 5, 1128
FspBI CTAG 3 cut(s) 683, 1254, 1539
FspI TGCGCA 2 cut(s) 5, 1128
GlaI GCGC 5 cut(s) 5, 975, 1016, 1128, 1578
GluI GCNGC 7 cut(s) 234, 441, 765, 969, 972, 1489, 1554
HaeII RGCGCY 1 cut(s) 1580
HaeIII GGCC 5 cut(s) 144, 246, 879, 948, 971
HapII CCGG 4 cut(s) 21, 182, 949, 1574
HgaI GACGC 1 cut(s) 855
HhaI GCGC 5 cut(s) 6, 976, 1017, 1129, 1579
Hin1I GRCGYC 2 cut(s) 866, 1577
Hin6I GCGC 5 cut(s) 4, 974, 1015, 1127, 1577
HinP1I GCGC 5 cut(s) 4, 974, 1015, 1127, 1577
HincII GTYRAC 1 cut(s) 1344
HindII GTYRAC 1 cut(s) 1344
HindIII AAGCTT 1 cut(s) 152
HinfI GANTC 5 cut(s) 424, 707, 748, 929, 1266
HpaII CCGG 4 cut(s) 21, 182, 949, 1574
HphI GGTGA 4 cut(s) 116, 299, 845, 953
Hpy166II GTNNAC 3 cut(s) 274, 1344, 1566
Hpy188I TCNGA 3 cut(s) 1224, 1276, 1294
Hpy188III TCNNGA 6 cut(s) 56, 356, 596, 640, 1407, 1462
Hpy8I GTNNAC 3 cut(s) 274, 1344, 1566
Hpy99I CGWCG 1 cut(s) 400
HpyAV CCTTC 5 cut(s) 137, 582, 860, 938, 1129
HpyCH4III ACNGT 6 cut(s) 118, 172, 941, 1400, 1477, 1636
HpyCH4IV ACGT 7 cut(s) 147, 293, 395, 507, 672, 1364, 1644
HpyF10VI GCNNNNNNNGC 8 cut(s) 32, 239, 449, 479, 1036, 1245, 1508, 1625
HpyF3I CTNAG 3 cut(s) 80, 1031, 1095
HpySE526I ACGT 7 cut(s) 147, 293, 395, 507, 672, 1364, 1644
Hsp92I GRCGYC 2 cut(s) 866, 1577
HspAI GCGC 5 cut(s) 4, 974, 1015, 1127, 1577
KasI GGCGCC 1 cut(s) 1576
Ksp22I TGATCA 1 cut(s) 58
Kzo9I GATC 8 cut(s) 58, 389, 533, 564, 592, 603, 676, 1045
LmnI GCTCC 2 cut(s) 23, 1496
Lsp1109I GCAGC 3 cut(s) 220, 427, 1540
LweI GCATC 4 cut(s) 111, 245, 1099, 1668
MaeI CTAG 3 cut(s) 683, 1254, 1539
MaeII ACGT 7 cut(s) 147, 293, 395, 507, 672, 1364, 1644
MaeIII GTNAC 5 cut(s) 776, 801, 833, 935, 1585
MalI GATC 8 cut(s) 60, 391, 535, 566, 594, 605, 678, 1047
MboI GATC 8 cut(s) 58, 389, 533, 564, 592, 603, 676, 1045
MboII GAAGA 8 cut(s) 545, 597, 614, 908, 950, 993, 1013, 1204
MfeI CAATTG 1 cut(s) 1506
MflI RGATCY 4 cut(s) 389, 592, 603, 676
MhlI GDGCHC 2 cut(s) 1424, 1525
MlsI TGGCCA 1 cut(s) 246
MluI ACGCGT 1 cut(s) 793
MluNI TGGCCA 1 cut(s) 246
Mly113I GGCGCC 1 cut(s) 1577
MlyI GAGTC 2 cut(s) 418, 938
MmeI TCCRAC 2 cut(s) 184, 988
Mox20I TGGCCA 1 cut(s) 246
Mph1103I ATGCAT 1 cut(s) 665
MroXI GAANNNNTTC 1 cut(s) 900
MscI TGGCCA 1 cut(s) 246
MseI TTAA 5 cut(s) 297, 468, 510, 987, 1145
MslI CAYNNNNRTG 3 cut(s) 357, 860, 1128
Msp20I TGGCCA 1 cut(s) 246
MspA1I CMGCKG 2 cut(s) 242, 713
MspI CCGG 4 cut(s) 21, 182, 949, 1574
MspR9I CCNGG 3 cut(s) 183, 1581, 1616
MunI CAATTG 1 cut(s) 1506
Mva1269I GAATGC 1 cut(s) 400
MvaI CCWGG 2 cut(s) 1581, 1616
MvnI CGCG 2 cut(s) 795, 974
MwoI GCNNNNNNNGC 8 cut(s) 32, 239, 449, 479, 1036, 1245, 1508, 1625
NarI GGCGCC 1 cut(s) 1577
NciI CCSGG 1 cut(s) 183
NdeI CATATG 2 cut(s) 569, 665
NdeII GATC 8 cut(s) 58, 389, 533, 564, 592, 603, 676, 1045
NlaIV GGNNCC 7 cut(s) 25, 391, 594, 605, 1423, 1492, 1578
NmuCI GTSAC 2 cut(s) 833, 935
NotI GCGGCCGC 1 cut(s) 969
NsbI TGCGCA 2 cut(s) 5, 1128
NsiI ATGCAT 1 cut(s) 665
NspI RCATGY 3 cut(s) 33, 335, 863
NspV TTCGAA 1 cut(s) 1310
PciI ACATGT 2 cut(s) 29, 859
PctI GAATGC 1 cut(s) 400
PdmI GAANNNNTTC 1 cut(s) 900
PfeI GAWTC 3 cut(s) 707, 748, 1266
PkrI GCNGC 7 cut(s) 235, 442, 766, 970, 973, 1490, 1555
PleI GAGTC 2 cut(s) 418, 937
PluTI GGCGCC 1 cut(s) 1580
PmaCI CACGTG 1 cut(s) 148
PmlI CACGTG 1 cut(s) 148
PpsI GAGTC 2 cut(s) 418, 937
Ppu21I YACGTR 2 cut(s) 148, 673
PscI ACATGT 2 cut(s) 29, 859
Psp1406I AACGTT 1 cut(s) 1364
Psp6I CCWGG 2 cut(s) 1579, 1614
PspCI CACGTG 1 cut(s) 148
PspGI CCWGG 2 cut(s) 1579, 1614
PspN4I GGNNCC 7 cut(s) 25, 391, 594, 605, 1423, 1492, 1578
PspPI GGNCC 2 cut(s) 76, 1180
PsuI RGATCY 4 cut(s) 389, 592, 603, 676
PvuII CAGCTG 1 cut(s) 713
RsaI GTAC 2 cut(s) 792, 1230
RsaNI GTAC 2 cut(s) 791, 1229
RseI CAYNNNNRTG 3 cut(s) 357, 860, 1128
SaqAI TTAA 5 cut(s) 297, 468, 510, 987, 1145
SatI GCNGC 7 cut(s) 234, 441, 765, 969, 972, 1489, 1554
Sau3AI GATC 8 cut(s) 58, 389, 533, 564, 592, 603, 676, 1045
Sau96I GGNCC 2 cut(s) 76, 1180
SchI GAGTC 2 cut(s) 418, 938
ScrFI CCNGG 3 cut(s) 183, 1581, 1616
SduI GDGCHC 2 cut(s) 1424, 1525
SfaNI GCATC 4 cut(s) 111, 245, 1099, 1668
SfoI GGCGCC 1 cut(s) 1578
SfuI TTCGAA 1 cut(s) 1310
SinI GGWCC 2 cut(s) 76, 1180
SmiI ATTTAAAT 1 cut(s) 1146
SmiMI CAYNNNNRTG 3 cut(s) 357, 860, 1128
SmlI CTYRAG 3 cut(s) 282, 922, 1558
SmoI CTYRAG 3 cut(s) 282, 922, 1558
SnaBI TACGTA 1 cut(s) 673
SsiI CCGC 9 cut(s) 193, 221, 240, 255, 764, 788, 968, 972, 1488
SspDI GGCGCC 1 cut(s) 1576
SspI AATATT 2 cut(s) 52, 955
SspMI CTAG 3 cut(s) 683, 1254, 1539
StyD4I CCNGG 3 cut(s) 181, 1579, 1614
SwaI ATTTAAAT 1 cut(s) 1146
TaaI ACNGT 6 cut(s) 118, 172, 941, 1400, 1477, 1636
TaiI ACGT 7 cut(s) 150, 296, 398, 510, 675, 1367, 1647
TaqI TCGA 2 cut(s) 536, 1310
TaqII GACCGA 1 cut(s) 1211
TauI GCSGC 4 cut(s) 767, 971, 974, 1491
TfiI GAWTC 3 cut(s) 707, 748, 1266
Tru1I TTAA 5 cut(s) 297, 468, 510, 987, 1145
Tru9I TTAA 5 cut(s) 297, 468, 510, 987, 1145
TscAI CASTG 3 cut(s) 328, 1635, 1641
TseFI GTSAC 2 cut(s) 833, 935
TseI GCWGC 3 cut(s) 233, 440, 1553
Tsp45I GTSAC 2 cut(s) 833, 935
TspDTI ATGAA 5 cut(s) 215, 251, 315, 614, 950
TspGWI ACGGA 2 cut(s) 95, 746
TspRI CASTG 3 cut(s) 328, 1635, 1641
VpaK11BI GGWCC 2 cut(s) 76, 1180
XapI RAATTY 4 cut(s) 175, 809, 1107, 1455
XceI RCATGY 3 cut(s) 33, 335, 863
XcmI CCANNNNNNNNNTGG 1 cut(s) 1004
XmiI GTMKAC 1 cut(s) 273
XmnI GAANNNNTTC 1 cut(s) 900
XspI CTAG 3 cut(s) 683, 1254, 1539
Zsp2I ATGCAT 1 cut(s) 665
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.