AT4G05040

ankyrin repeat family protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
OG0000494
Physical Location & Seq
Forward (+)
2578594 .. 2582290
3697 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G05040.1

Sequence Viewer

Length: 1719 bp
ATGGACAGTTCTGAAGCACATCTAGATAGAATTGAGGCACAGAGGTCAACGGATGTGTCTCATGACCAACAGAAAAAAAGATACTTCCCAATGAATCTGATAAACAAAGTCGCAAGCAAACTCTGTTCACGAGGAGGAGATGGCGCCACGCCACCTATGGGAGACAATGAATCTGGGCTAGAGTTCCTCAACAACCTCAAATTATCGGATCTTTTCCATCTCCCGGGTGAAAATGTCCAGATGAATACGGAAGTTTTTAGCGGACTGAGTGATGGGGACAAAGAGTGTCTGGAGATGTTGAAAGGCGTTGGAACGCCAATGGCATGTCTCAAGAGCGATAGAGGAGATTCAGTTCTTCATCTTGCTGCTAGATGGGGTCATCTAGAACTAGTGAAGAACATTATCTCTGAATGCCCATGCCTTGTATTGGAGTTAAACTTCAAGGATCAGCTTCCGCTTCATGTGGCAGCTCATGCCGGTCATTCGGCTATTGTTGAGGCTCTTGTTGCGTCGGTAACATTTTTTTCAGATAGACTGGCTGAAGAAGATAGAGAGAGACTAAATCCATATGTTCTCAGAGACAAATATGGAAATACTGCTCTGCACTTGGCCATTGAAGGACGCTATATGGAGATGGCTGCCTCTCTGGTGAACGAGAACCAGAATGCTTCTTTTCTTGAAAATAATGAGGGAATATCTTCCTTGTACATGGCAGTAGAAGCTGGAGATGTGACTCTTGTGAAAGAAATTTTGAAAACCGCAGGTAACAATGACCTTGAAGGGAGGAACTCTAACTTAGATTCAAAGTTGGAAGGGAGAAAACATCTTGTACATGTTGCTTTGAATGCCAGAAGTATAGGTGTCCTTGATGTTATTCTTAACGAATATCCAAGTCTTGAGGACGAGCGAGATGAAGAAGGAAGGACTTGTCTATCCTTTGCAGCATCCATAGGGTTTTATAAAGGAGTATGCAACCTGTTAGACCGATCAACAAAGAATGTTTATGTCTGTGACGAAGATGGTTCTTTTCCAATACATACGGCTGCAGAGAACGGCCATATCAGAATTGTCAAAGAGATTCTAAAACGTTGTCCACATTCAAAACACATGCTCAACAAACTTGGCCAGAACGTTCTCCACATTGCAGCAAAGATTGGGGAACATAATCTTGTAAAATCGTTGATGCGAAGTGATGATACAAAACATTTGGGTGTTGGTCAAGATGTGGATGGTAATACACCTTTGCACCTTGCTGTCCTAAATTGGCGCTACCGATCAATTAGAACGCTAGCTTCGGATGTAAAGATACTGCAACTACGAAACGATAACGGCTTAACAGCTAGGGGTATTGCCGAGTCAGTGCTGAAACCCAACTACATCTTTCATGAGAGGTTGACACTGGCATTCTTATTAGACGCTCACGCGTTTAGGGGTTGTGGATCTGTTAAGTCGTTAACAAAACCATCAGAACCACTAGACCATGAAAAGAGCAGAGATTACGTCAACACTCTTCTACTGGTAGCAGCACTTGTAGCCACAATGACGTTTGCTGCAGGTTTTACAATACCAGGTGGCTTTAATAGCTCTGCTCCACACTTAGGAAGAGCAACTTTGACCACTGACCCAAATCTCTTCTTTTTTCTGCTATTTGACATATTGGCAATGCAAACATCAGTTGCATCAATATGTACTCTTATATATATGGGCGCAGTTGGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001101 GO:0002376 GO:0002831 GO:0002833 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0005886 GO:0005887 GO:0006464 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0008152 GO:0008219 GO:0009266 GO:0009314 GO:0009409 GO:0009416 GO:0009605 GO:0009607 GO:0009615 GO:0009617 GO:0009628 GO:0009719 GO:0009725 GO:0009751 GO:0009814 GO:0009816 GO:0009966 GO:0009987 GO:0010033 GO:0010646 GO:0012505 GO:0014070 GO:0016020 GO:0016021 GO:0016567 GO:0019538 GO:0023051 GO:0030176 GO:0031224 GO:0031226 GO:0031227 GO:0031347 GO:0031349 GO:0031984 GO:0032101 GO:0032103 GO:0032446 GO:0032870 GO:0035690 GO:0036211 GO:0042175 GO:0042221 GO:0042493 GO:0042742 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043900 GO:0043902 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044459 GO:0044464 GO:0045087 GO:0046677 GO:0048518 GO:0048583 GO:0048584 GO:0050789 GO:0050794 GO:0050826 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0065007 GO:0070647 GO:0070887 GO:0071229 GO:0071236 GO:0071310 GO:0071407 GO:0071446 GO:0071495 GO:0071704 GO:0071944 GO:0080134 GO:0098542 GO:0098827 GO:1900150 GO:1900424 GO:1900426 GO:1901564 GO:1901700 GO:1901701 GO:1902288 GO:1902290 GO:2000031 GO:2001023 GO:2001038
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank Ank_2 Ank_4 Ank_5 PGG

Protein Analysis

572

Amino Acids

62.92

Weight (kDa)

5.91

Isoelectric Point (pI)

33.79

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 91 - 170 1.1e-08 Ankyrin repeats (3 copies)
Ank_2 PF12796 193 - 253 6.8e-06 Ankyrin repeats (3 copies)
Ank_2 PF12796 345 - 432 1.2e-13 Ankyrin repeats (3 copies)
PGG PF13962 496 - 568 1.7e-19 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000494)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G03670 AT4G03440 AT4G03440 AT4G03440 AT4G03450 AT4G03450 AT4G03460 AT4G03460 AT4G03470 AT4G03480 AT4G03480 AT4G03490 AT4G03490 AT4G03490 AT4G03490 AT4G03490 AT4G03500 AT4G03500 AT4G03500 AT4G03505 AT4G05040 AT4G05040 AT4G05040 AT4G05040 AT4G05040 AT4G05040 AT4G05040 AT4G14390 AT4G14390 AT4G14390 AT4G14390 AT4G14400 AT4G14400 AT4G14400
fragaria_vesca FvH4_3g05910 FvH4_3g23320
malus_domestica MD03G1094000.v1.1 MD03G1094200.v1.1 MD03G1094600.v1.1 MD12G1218700.v1.1
prunus_persica Prupe.3G135100_v2.0.a1 Prupe.3G135200_v2.0.a1 Prupe.3G135700_v2.0.a1 Prupe.3G135700_v2.0.a1 Prupe.3G142400_v2.0.a1 Prupe.3G153800_v2.0.a1 Prupe.3G153800_v2.0.a1 Prupe.3G153800_v2.0.a1 Prupe.3G153800_v2.0.a1 Prupe.3G154000_v2.0.a1 Prupe.3G154200_v2.0.a1 Prupe.3G154200_v2.0.a1 Prupe.3G154600_v2.0.a1 Prupe.3G154700_v2.0.a1 Prupe.3G155200_v2.0.a1 Prupe.3G155300_v2.0.a1 Prupe.8G110300_v2.0.a1
pyrus_communis pycom03g07280 pycom03g07580 pycom03g07660 pycom03g07700 pycom03g07710
rosa_chinensis RchiOBHm_Chr3g0461161 RchiOBHm_Chr5g0041111
rosa_laevigata RLG00000023472 RLG00000023475 RLG00000034025
rosa_multiflora Rmu_co8126040.1_g000001 Rmu_co8268563.1_g000001 Rmu_sc0000964.1_g000014 Rmu_sc0028923.1_g000001 Rmu_sc0042194.1_g000001
rosa_roxburghii Rroxscaffold_1G00039610 Rroxscaffold_6G00401360
rosa_rugosa Rorug03G0048600 Rorug03G0048700 Rorug05G0190000
rosa_samantha Rh3AG105900 Rh3BG110200 Rh3BG268400 Rh3CG111800 Rh3DG111900 Rh5AG275800 Rh5BG280500 Rh5CG312600 Rh5DG288800
rosa_wichuraiana Rw3G009080 Rw5G025920

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 960
Acc36I ACCTGC 2 cut(s) 752, 1544
AccB1I GGYRCC 1 cut(s) 143
AccII CGCG 1 cut(s) 1424
AciI CCGC 3 cut(s) 261, 455, 759
AclI AACGTT 2 cut(s) 1087, 1131
AclWI GGATC 3 cut(s) 216, 453, 1447
AcoI YGGCCR 3 cut(s) 609, 1054, 1123
AcsI RAATTY 1 cut(s) 747
AcuI CTGAAG 2 cut(s) 33, 561
AcyI GRCGYC 1 cut(s) 144
AfaI GTAC 3 cut(s) 707, 831, 1690
AfiI CCNNNNNNNGG 4 cut(s) 158, 223, 427, 1598
AflIII ACRYGT 2 cut(s) 832, 1422
AgsI TTSAA 9 cut(s) 301, 442, 617, 680, 754, 779, 804, 844, 1101
AhlI ACTAGT 1 cut(s) 388
AjnI CCWGG 1 cut(s) 1567
AloI GAACNNNNNNTCC 2 cut(s) 336, 368
AluBI AGCT 6 cut(s) 451, 470, 722, 1292, 1340, 1584
AluI AGCT 6 cut(s) 451, 470, 722, 1292, 1340, 1584
Alw26I GTCTC 5 cut(s) 63, 156, 332, 550, 573
AlwI GGATC 3 cut(s) 216, 453, 1447
Ama87I CYCGRG 1 cut(s) 223
AoxI GGCC 3 cut(s) 609, 1054, 1123
ApeKI GCWGC 8 cut(s) 365, 467, 638, 941, 1043, 1145, 1523, 1550
ApoI RAATTY 1 cut(s) 747
Asp700I GAANNNNTTC 1 cut(s) 697
AspLEI GCGC 3 cut(s) 146, 1269, 1709
AsuC2I CCSGG 2 cut(s) 224, 225
AsuHPI GGTGA 2 cut(s) 239, 661
AsuNHI GCTAGC 1 cut(s) 1288
AvaI CYCGRG 1 cut(s) 223
BalI TGGCCA 2 cut(s) 611, 1125
BanI GGYRCC 1 cut(s) 143
BarI GAAGNNNNNNTAC 2 cut(s) 1180, 1212
BauI CACGAG 1 cut(s) 129
BbvI GCAGC 8 cut(s) 352, 479, 625, 953, 1030, 1157, 1535, 1537
BccI CCATC 8 cut(s) 134, 225, 266, 366, 628, 1013, 1223, 1471
BceAI ACGGC 3 cut(s) 1056, 1069, 1345
BciT130I CCWGG 1 cut(s) 1569
BcnI CCSGG 2 cut(s) 224, 225
BcoDI GTCTC 5 cut(s) 63, 156, 332, 550, 573
BcuI ACTAGT 1 cut(s) 388
BfaI CTAG 8 cut(s) 23, 179, 369, 383, 389, 1289, 1341, 1475
BfmI CTRYAG 2 cut(s) 1044, 1551
BfoI RGCGCY 2 cut(s) 147, 1270
BfuAI ACCTGC 2 cut(s) 752, 1544
BisI GCNGC 8 cut(s) 366, 468, 639, 942, 1044, 1146, 1524, 1551
BlsI GCNGC 8 cut(s) 367, 469, 640, 943, 1045, 1147, 1525, 1552
Bme1390I CCNGG 3 cut(s) 224, 225, 1569
BmeT110I CYCGRG 1 cut(s) 223
BmiI GGNNCC 1 cut(s) 145
BmrFI CCNGG 3 cut(s) 224, 225, 1569
BmsI GCATC 3 cut(s) 953, 1173, 1688
BmtI GCTAGC 1 cut(s) 1292
BpmI CTGGAG 2 cut(s) 311, 744
BpuEI CTTGAG 2 cut(s) 314, 917
BpuMI CCSGG 2 cut(s) 224, 225
BsaHI GRCGYC 1 cut(s) 144
BsaJI CCNNGG 1 cut(s) 223
BsaXI ACNNNNNCTCC 2 cut(s) 336, 366
Bsc4I CCNNNNNNNGG 4 cut(s) 158, 223, 427, 1598
Bse118I RCCGGY 1 cut(s) 476
Bse1I ACTGG 3 cut(s) 540, 1404, 1521
Bse3DI GCAATG 2 cut(s) 1140, 1668
BseBI CCWGG 1 cut(s) 1569
BseDI CCNNGG 1 cut(s) 223
BseGI GGATG 4 cut(s) 58, 944, 1234, 1303
BseLI CCNNNNNNNGG 4 cut(s) 158, 223, 427, 1598
BseMI GCAATG 2 cut(s) 1140, 1668
BseMII CTCAG 2 cut(s) 257, 589
BseNI ACTGG 3 cut(s) 540, 1404, 1521
BseRI GAGGAG 3 cut(s) 147, 150, 357
BseXI GCAGC 8 cut(s) 352, 479, 625, 953, 1030, 1157, 1535, 1537
BsgI GTGCAG 1 cut(s) 587
Bsh1236I CGCG 1 cut(s) 1424
BshFI GGCC 3 cut(s) 611, 1056, 1125
BshNI GGYRCC 1 cut(s) 143
BsiHKCI CYCGRG 1 cut(s) 223
BsiSI CCGG 2 cut(s) 224, 477
BslFI GGGAC 1 cut(s) 290
BslI CCNNNNNNNGG 4 cut(s) 158, 223, 427, 1598
BsmAI GTCTC 5 cut(s) 63, 156, 332, 550, 573
BsmFI GGGAC 1 cut(s) 290
BsmI GAATGC 4 cut(s) 416, 670, 850, 1403
BsnI GGCC 3 cut(s) 611, 1056, 1125
BsoBI CYCGRG 1 cut(s) 223
Bsp1407I TGTACA 2 cut(s) 705, 829
Bsp143I GATC 5 cut(s) 208, 445, 986, 1274, 1439
BspACI CCGC 3 cut(s) 261, 455, 759
BspANI GGCC 3 cut(s) 611, 1056, 1125
BspCNI CTCAG 2 cut(s) 258, 588
BspFNI CGCG 1 cut(s) 1424
BspHI TCATGA 2 cut(s) 61, 1384
BspLI GGNNCC 1 cut(s) 145
BspMAI CTGCAG 2 cut(s) 1048, 1555
BspMI ACCTGC 2 cut(s) 752, 1544
BspOI GCTAGC 1 cut(s) 1292
BspPI GGATC 3 cut(s) 216, 453, 1447
BspQI GCTCTTC 1 cut(s) 1597
BspT107I GGYRCC 1 cut(s) 143
BsrDI GCAATG 2 cut(s) 1140, 1668
BsrFI RCCGGY 1 cut(s) 476
BsrGI TGTACA 2 cut(s) 705, 829
BsrI ACTGG 3 cut(s) 540, 1404, 1521
BssAI RCCGGY 1 cut(s) 476
BssECI CCNNGG 1 cut(s) 223
BssMI GATC 5 cut(s) 208, 445, 986, 1274, 1439
BssNI GRCGYC 1 cut(s) 144
BssSI CACGAG 1 cut(s) 129
Bst2BI CACGAG 1 cut(s) 129
Bst2UI CCWGG 1 cut(s) 1569
Bst4CI ACNGT 1 cut(s) 8
Bst6I CTCTTC 3 cut(s) 1515, 1597, 1637
BstACI GRCGYC 1 cut(s) 144
BstAPI GCANNNNNTGC 1 cut(s) 473
BstAUI TGTACA 2 cut(s) 705, 829
BstC8I GCNNGC 2 cut(s) 115, 1290
BstDEI CTNAG 4 cut(s) 266, 575, 796, 1597
BstF5I GGATG 4 cut(s) 58, 944, 1234, 1303
BstFNI CGCG 1 cut(s) 1424
BstH2I RGCGCY 2 cut(s) 147, 1270
BstHHI GCGC 3 cut(s) 146, 1269, 1709
BstKTI GATC 5 cut(s) 211, 448, 989, 1277, 1442
BstMAI GTCTC 5 cut(s) 63, 156, 332, 550, 573
BstMBI GATC 5 cut(s) 208, 445, 986, 1274, 1439
BstMWI GCNNNNNNNGC 6 cut(s) 473, 506, 719, 845, 1532, 1581
BstNI CCWGG 1 cut(s) 1569
BstNSI RCATGY 3 cut(s) 327, 836, 1111
BstSCI CCNGG 3 cut(s) 222, 223, 1567
BstSFI CTRYAG 2 cut(s) 1044, 1551
BstUI CGCG 1 cut(s) 1424
BstV1I GCAGC 8 cut(s) 352, 479, 625, 953, 1030, 1157, 1535, 1537
BstX2I RGATCY 2 cut(s) 208, 1439
BstYI RGATCY 2 cut(s) 208, 1439
BsuRI GGCC 3 cut(s) 611, 1056, 1125
BtsCI GGATG 4 cut(s) 58, 944, 1234, 1303
BtsIMutI CAGTG 3 cut(s) 1365, 1397, 1617
BveI ACCTGC 2 cut(s) 752, 1544
Cac8I GCNNGC 2 cut(s) 115, 1290
CciI TCATGA 2 cut(s) 61, 1384
CfoI GCGC 3 cut(s) 146, 1269, 1709
Cfr10I RCCGGY 1 cut(s) 476
Cfr9I CCCGGG 1 cut(s) 223
CseI GACGC 3 cut(s) 498, 630, 1424
CsiI ACCWGGT 1 cut(s) 1567
Csp6I GTAC 3 cut(s) 706, 830, 1689
CviQI GTAC 3 cut(s) 706, 830, 1689
DdeI CTNAG 4 cut(s) 266, 575, 796, 1597
DinI GGCGCC 1 cut(s) 145
DpnI GATC 5 cut(s) 210, 447, 988, 1276, 1441
DpnII GATC 5 cut(s) 208, 445, 986, 1274, 1439
EaeI YGGCCR 3 cut(s) 609, 1054, 1123
Eam1104I CTCTTC 3 cut(s) 1515, 1597, 1637
EarI CTCTTC 3 cut(s) 1515, 1597, 1637
Eco57I CTGAAG 2 cut(s) 33, 561
Eco88I CYCGRG 1 cut(s) 223
EcoRII CCWGG 1 cut(s) 1567
EgeI GGCGCC 1 cut(s) 145
EheI GGCGCC 1 cut(s) 145
FalI AAGNNNNNCTT 2 cut(s) 1594, 1626
FaqI GGGAC 1 cut(s) 290
FauNDI CATATG 1 cut(s) 568
Fnu4HI GCNGC 8 cut(s) 366, 468, 639, 942, 1044, 1146, 1524, 1551
FokI GGATG 4 cut(s) 65, 931, 1241, 1310
Fsp4HI GCNGC 8 cut(s) 366, 468, 639, 942, 1044, 1146, 1524, 1551
FspBI CTAG 8 cut(s) 23, 179, 369, 383, 389, 1289, 1341, 1475
GlaI GCGC 3 cut(s) 145, 1268, 1708
GluI GCNGC 8 cut(s) 366, 468, 639, 942, 1044, 1146, 1524, 1551
GsuI CTGGAG 2 cut(s) 311, 744
HaeII RGCGCY 2 cut(s) 147, 1270
HaeIII GGCC 3 cut(s) 611, 1056, 1125
HapII CCGG 2 cut(s) 224, 477
HgaI GACGC 3 cut(s) 498, 630, 1424
HhaI GCGC 3 cut(s) 146, 1269, 1709
Hin1I GRCGYC 1 cut(s) 144
Hin6I GCGC 3 cut(s) 144, 1267, 1707
HinP1I GCGC 3 cut(s) 144, 1267, 1707
HincII GTYRAC 4 cut(s) 48, 1395, 1455, 1504
HindII GTYRAC 4 cut(s) 48, 1395, 1455, 1504
HinfI GANTC 7 cut(s) 94, 170, 347, 733, 800, 1078, 1355
HpaI GTTAAC 1 cut(s) 1455
HpaII CCGG 2 cut(s) 224, 477
HphI GGTGA 2 cut(s) 239, 661
Hpy166II GTNNAC 7 cut(s) 48, 128, 652, 1094, 1395, 1455, 1504
Hpy188I TCNGA 9 cut(s) 13, 99, 208, 409, 529, 578, 1064, 1297, 1468
Hpy8I GTNNAC 7 cut(s) 48, 128, 652, 1094, 1395, 1455, 1504
Hpy99I CGWCG 1 cut(s) 514
HpyAV CCTTC 5 cut(s) 611, 773, 806, 911, 915
HpyCH4III ACNGT 1 cut(s) 8
HpyCH4IV ACGT 4 cut(s) 1087, 1131, 1500, 1544
HpyF10VI GCNNNNNNNGC 6 cut(s) 473, 506, 719, 845, 1532, 1581
HpyF3I CTNAG 4 cut(s) 266, 575, 796, 1597
HpySE526I ACGT 4 cut(s) 1087, 1131, 1500, 1544
Hsp92I GRCGYC 1 cut(s) 144
HspAI GCGC 3 cut(s) 144, 1267, 1707
KasI GGCGCC 1 cut(s) 143
KspAI GTTAAC 1 cut(s) 1455
Kzo9I GATC 5 cut(s) 208, 445, 986, 1274, 1439
LguI GCTCTTC 1 cut(s) 1597
LmnI GCTCC 1 cut(s) 1594
Lsp1109I GCAGC 8 cut(s) 352, 479, 625, 953, 1030, 1157, 1535, 1537
LweI GCATC 3 cut(s) 953, 1173, 1688
MabI ACCWGGT 1 cut(s) 1567
MaeI CTAG 8 cut(s) 23, 179, 369, 383, 389, 1289, 1341, 1475
MaeII ACGT 4 cut(s) 1087, 1131, 1500, 1544
MaeIII GTNAC 4 cut(s) 514, 730, 764, 1010
MalI GATC 5 cut(s) 210, 447, 988, 1276, 1441
MboI GATC 5 cut(s) 208, 445, 986, 1274, 1439
MflI RGATCY 2 cut(s) 208, 1439
MlsI TGGCCA 2 cut(s) 611, 1125
MluCI AATT 6 cut(s) 30, 200, 747, 1065, 1261, 1278
MluI ACGCGT 1 cut(s) 1422
MluNI TGGCCA 2 cut(s) 611, 1125
Mly113I GGCGCC 1 cut(s) 144
MlyI GAGTC 2 cut(s) 727, 1364
MmeI TCCRAC 2 cut(s) 289, 789
Mox20I TGGCCA 2 cut(s) 611, 1125
MroXI GAANNNNTTC 1 cut(s) 697
MscI TGGCCA 2 cut(s) 611, 1125
MseI TTAA 6 cut(s) 434, 879, 1334, 1446, 1454, 1578
MslI CAYNNNNRTG 2 cut(s) 1209, 1684
Msp20I TGGCCA 2 cut(s) 611, 1125
MspI CCGG 2 cut(s) 224, 477
MspR9I CCNGG 3 cut(s) 224, 225, 1569
Mva1269I GAATGC 4 cut(s) 416, 670, 850, 1403
MvaI CCWGG 1 cut(s) 1569
MvnI CGCG 1 cut(s) 1424
MwoI GCNNNNNNNGC 6 cut(s) 473, 506, 719, 845, 1532, 1581
NarI GGCGCC 1 cut(s) 144
NciI CCSGG 2 cut(s) 224, 225
NdeI CATATG 1 cut(s) 568
NdeII GATC 5 cut(s) 208, 445, 986, 1274, 1439
NheI GCTAGC 1 cut(s) 1288
NlaIV GGNNCC 1 cut(s) 145
NmeAIII GCCGAG 1 cut(s) 1378
NmuCI GTSAC 2 cut(s) 730, 1010
NspI RCATGY 3 cut(s) 327, 836, 1111
PagI TCATGA 2 cut(s) 61, 1384
PciI ACATGT 1 cut(s) 832
PciSI GCTCTTC 1 cut(s) 1597
PctI GAATGC 4 cut(s) 416, 670, 850, 1403
PdmI GAANNNNTTC 1 cut(s) 697
PfeI GAWTC 5 cut(s) 94, 170, 347, 800, 1078
PkrI GCNGC 8 cut(s) 367, 469, 640, 943, 1045, 1147, 1525, 1552
PleI GAGTC 2 cut(s) 727, 1363
PluTI GGCGCC 1 cut(s) 147
PpsI GAGTC 2 cut(s) 727, 1363
PscI ACATGT 1 cut(s) 832
PsiI TTATAA 1 cut(s) 960
Psp1406I AACGTT 2 cut(s) 1087, 1131
Psp6I CCWGG 1 cut(s) 1567
PspGI CCWGG 1 cut(s) 1567
PspN4I GGNNCC 1 cut(s) 145
PstI CTGCAG 2 cut(s) 1048, 1555
PsuI RGATCY 2 cut(s) 208, 1439
RsaI GTAC 3 cut(s) 707, 831, 1690
RsaNI GTAC 3 cut(s) 706, 830, 1689
RseI CAYNNNNRTG 2 cut(s) 1209, 1684
SapI GCTCTTC 1 cut(s) 1597
SaqAI TTAA 6 cut(s) 434, 879, 1334, 1446, 1454, 1578
SatI GCNGC 8 cut(s) 366, 468, 639, 942, 1044, 1146, 1524, 1551
Sau3AI GATC 5 cut(s) 208, 445, 986, 1274, 1439
SchI GAGTC 2 cut(s) 727, 1364
ScrFI CCNGG 3 cut(s) 224, 225, 1569
SexAI ACCWGGT 1 cut(s) 1567
SfaNI GCATC 3 cut(s) 953, 1173, 1688
SfcI CTRYAG 2 cut(s) 1044, 1551
SfoI GGCGCC 1 cut(s) 145
SmaI CCCGGG 1 cut(s) 225
SmiMI CAYNNNNRTG 2 cut(s) 1209, 1684
SmlI CTYRAG 2 cut(s) 329, 896
SmoI CTYRAG 2 cut(s) 329, 896
SpeI ACTAGT 1 cut(s) 388
Sse9I AATT 6 cut(s) 30, 200, 747, 1065, 1261, 1278
SsiI CCGC 3 cut(s) 261, 455, 759
SspDI GGCGCC 1 cut(s) 143
SspMI CTAG 8 cut(s) 23, 179, 369, 383, 389, 1289, 1341, 1475
StyD4I CCNGG 3 cut(s) 222, 223, 1567
TaaI ACNGT 1 cut(s) 8
TaiI ACGT 4 cut(s) 1090, 1134, 1503, 1547
TaqII GACCGA 1 cut(s) 999
TasI AATT 6 cut(s) 30, 200, 747, 1065, 1261, 1278
TatI WGTACW 3 cut(s) 705, 829, 1688
TfiI GAWTC 5 cut(s) 94, 170, 347, 800, 1078
Tru1I TTAA 6 cut(s) 434, 879, 1334, 1446, 1454, 1578
Tru9I TTAA 6 cut(s) 434, 879, 1334, 1446, 1454, 1578
TscAI CASTG 3 cut(s) 1365, 1404, 1624
TseFI GTSAC 2 cut(s) 730, 1010
TseI GCWGC 8 cut(s) 365, 467, 638, 941, 1043, 1145, 1523, 1550
Tsp45I GTSAC 2 cut(s) 730, 1010
TspDTI ATGAA 8 cut(s) 107, 183, 257, 347, 449, 927, 1373, 1497
TspGWI ACGGA 2 cut(s) 65, 263
TspMI CCCGGG 1 cut(s) 223
TspRI CASTG 3 cut(s) 1365, 1404, 1624
XapI RAATTY 1 cut(s) 747
XbaI TCTAGA 2 cut(s) 22, 382
XceI RCATGY 3 cut(s) 327, 836, 1111
XcmI CCANNNNNNNNNTGG 1 cut(s) 154
XmaI CCCGGG 1 cut(s) 223
XmnI GAANNNNTTC 1 cut(s) 697
XspI CTAG 8 cut(s) 23, 179, 369, 383, 389, 1289, 1341, 1475
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.