Domain of unknown function (DUF3475)
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 2 cut(s) | 181, 202 |
| AccI | GTMKAC | 1 cut(s) | 797 |
| AciI | CCGC | 2 cut(s) | 856, 1121 |
| AclWI | GGATC | 7 cut(s) | 24, 671, 705, 1036, 1721, 1811, 1896 |
| AcsI | RAATTY | 3 cut(s) | 441, 565, 1730 |
| AfaI | GTAC | 5 cut(s) | 331, 561, 721, 1763, 1848 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 24, 178, 404, 511, 554, 1546, 1833 |
| AflIII | ACRYGT | 1 cut(s) | 94 |
| AgeI | ACCGGT | 1 cut(s) | 145 |
| AjiI | CACGTC | 1 cut(s) | 314 |
| AjnI | CCWGG | 1 cut(s) | 1231 |
| AleI | CACNNNNGTG | 1 cut(s) | 476 |
| AluBI | AGCT | 9 cut(s) | 281, 309, 611, 803, 1009, 1079, 1310, 1367, 1510 |
| AluI | AGCT | 9 cut(s) | 281, 309, 611, 803, 1009, 1079, 1310, 1367, 1510 |
| Alw21I | GWGCWC | 2 cut(s) | 311, 1290 |
| Alw26I | GTCTC | 5 cut(s) | 103, 162, 182, 1179, 1454 |
| AlwI | GGATC | 7 cut(s) | 24, 671, 705, 1036, 1721, 1811, 1896 |
| AoxI | GGCC | 3 cut(s) | 783, 1632, 1835 |
| ApeKI | GCWGC | 5 cut(s) | 50, 605, 608, 1225, 1349 |
| ApoI | RAATTY | 3 cut(s) | 441, 565, 1730 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 1250, 1282, 1394, 1426 |
| AsiGI | ACCGGT | 1 cut(s) | 145 |
| AspLEI | GCGC | 1 cut(s) | 1254 |
| AspS9I | GGNCC | 1 cut(s) | 1836 |
| AsuC2I | CCSGG | 1 cut(s) | 1710 |
| AsuHPI | GGTGA | 1 cut(s) | 135 |
| AsuII | TTCGAA | 1 cut(s) | 1915 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1155, 1188 |
| BanI | GGYRCC | 2 cut(s) | 181, 202 |
| BanII | GRGCYC | 1 cut(s) | 311 |
| BauI | CACGAG | 2 cut(s) | 1169, 1203 |
| Bbv12I | GWGCWC | 2 cut(s) | 311, 1290 |
| BbvI | GCAGC | 5 cut(s) | 37, 592, 620, 1212, 1336 |
| BccI | CCATC | 3 cut(s) | 556, 1107, 1651 |
| BceAI | ACGGC | 1 cut(s) | 253 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 890, 924 |
| BciT130I | CCWGG | 1 cut(s) | 1233 |
| BclI | TGATCA | 1 cut(s) | 216 |
| BcnI | CCSGG | 1 cut(s) | 1710 |
| BcoDI | GTCTC | 5 cut(s) | 103, 162, 182, 1179, 1454 |
| BfaI | CTAG | 3 cut(s) | 255, 399, 981 |
| BfmI | CTRYAG | 3 cut(s) | 333, 606, 1262 |
| BglII | AGATCT | 1 cut(s) | 1568 |
| BisI | GCNGC | 5 cut(s) | 51, 606, 609, 1226, 1350 |
| BlsI | GCNGC | 5 cut(s) | 52, 607, 610, 1227, 1351 |
| Bme1390I | CCNGG | 2 cut(s) | 1233, 1710 |
| BmgBI | CACGTC | 1 cut(s) | 314 |
| BmgT120I | GGNCC | 1 cut(s) | 1836 |
| BmiI | GGNNCC | 2 cut(s) | 183, 204 |
| BmrFI | CCNGG | 2 cut(s) | 1233, 1710 |
| BmrI | ACTGGG | 1 cut(s) | 1416 |
| BmsI | GCATC | 2 cut(s) | 745, 759 |
| BmuI | ACTGGG | 1 cut(s) | 1416 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 612, 644, 863, 895 |
| BpmI | CTGGAG | 1 cut(s) | 438 |
| Bpu14I | TTCGAA | 1 cut(s) | 1915 |
| BpuEI | CTTGAG | 1 cut(s) | 1526 |
| BpuMI | CCSGG | 1 cut(s) | 1710 |
| Bsa29I | ATCGAT | 1 cut(s) | 1161 |
| BsaI | GGTCTC | 2 cut(s) | 162, 182 |
| BsaJI | CCNNGG | 2 cut(s) | 370, 1709 |
| BsaWI | WCCGGW | 2 cut(s) | 68, 145 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 116, 146, 636, 666 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 24, 178, 404, 511, 554, 1546, 1833 |
| Bse118I | RCCGGY | 2 cut(s) | 104, 145 |
| Bse1I | ACTGG | 2 cut(s) | 1411, 1438 |
| BseBI | CCWGG | 1 cut(s) | 1233 |
| BseCI | ATCGAT | 1 cut(s) | 1161 |
| BseDI | CCNNGG | 2 cut(s) | 370, 1709 |
| BseGI | GGATG | 6 cut(s) | 49, 229, 548, 592, 760, 1643 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 24, 178, 404, 511, 554, 1546, 1833 |
| BseMII | CTCAG | 4 cut(s) | 643, 695, 749, 1404 |
| BseNI | ACTGG | 2 cut(s) | 1411, 1438 |
| BseRI | GAGGAG | 2 cut(s) | 40, 884 |
| BseXI | GCAGC | 5 cut(s) | 37, 592, 620, 1212, 1336 |
| BshFI | GGCC | 3 cut(s) | 785, 1634, 1837 |
| BshNI | GGYRCC | 2 cut(s) | 181, 202 |
| BshTI | ACCGGT | 1 cut(s) | 145 |
| BshVI | ATCGAT | 1 cut(s) | 1161 |
| BsiHKAI | GWGCWC | 2 cut(s) | 311, 1290 |
| BsiSI | CCGG | 5 cut(s) | 69, 105, 146, 185, 1709 |
| BslFI | GGGAC | 1 cut(s) | 1280 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 24, 178, 404, 511, 554, 1546, 1833 |
| BsmAI | GTCTC | 5 cut(s) | 103, 162, 182, 1179, 1454 |
| BsmFI | GGGAC | 1 cut(s) | 1280 |
| BsmI | GAATGC | 1 cut(s) | 240 |
| BsnI | GGCC | 3 cut(s) | 785, 1634, 1837 |
| Bso31I | GGTCTC | 2 cut(s) | 162, 182 |
| Bsp119I | TTCGAA | 1 cut(s) | 1915 |
| Bsp1286I | GDGCHC | 2 cut(s) | 311, 1290 |
| BspACI | CCGC | 2 cut(s) | 856, 1121 |
| BspANI | GGCC | 3 cut(s) | 785, 1634, 1837 |
| BspCNI | CTCAG | 4 cut(s) | 642, 694, 748, 1405 |
| BspDI | ATCGAT | 1 cut(s) | 1161 |
| BspHI | TCATGA | 1 cut(s) | 814 |
| BspLI | GGNNCC | 2 cut(s) | 183, 204 |
| BspMAI | CTGCAG | 2 cut(s) | 337, 610 |
| BspPI | GGATC | 7 cut(s) | 24, 671, 705, 1036, 1721, 1811, 1896 |
| BspQI | GCTCTTC | 1 cut(s) | 1278 |
| BspT104I | TTCGAA | 1 cut(s) | 1915 |
| BspT107I | GGYRCC | 2 cut(s) | 181, 202 |
| BspTNI | GGTCTC | 2 cut(s) | 162, 182 |
| BsrFI | RCCGGY | 2 cut(s) | 104, 145 |
| BsrI | ACTGG | 2 cut(s) | 1411, 1438 |
| BssAI | RCCGGY | 2 cut(s) | 104, 145 |
| BssECI | CCNNGG | 2 cut(s) | 370, 1709 |
| BssNAI | GTATAC | 1 cut(s) | 798 |
| BssSI | CACGAG | 2 cut(s) | 1169, 1203 |
| BssT1I | CCWWGG | 1 cut(s) | 370 |
| Bst1107I | GTATAC | 1 cut(s) | 798 |
| Bst2BI | CACGAG | 2 cut(s) | 1169, 1203 |
| Bst2UI | CCWGG | 1 cut(s) | 1233 |
| Bst4CI | ACNGT | 6 cut(s) | 37, 141, 1266, 1294, 1640, 1660 |
| Bst6I | CTCTTC | 4 cut(s) | 926, 987, 1278, 1846 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1030 |
| BstBI | TTCGAA | 1 cut(s) | 1915 |
| BstC8I | GCNNGC | 4 cut(s) | 106, 110, 114, 825 |
| BstDEI | CTNAG | 7 cut(s) | 291, 629, 681, 735, 787, 1413, 1679 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 509 |
| BstF5I | GGATG | 6 cut(s) | 49, 229, 548, 592, 760, 1643 |
| BstHHI | GCGC | 1 cut(s) | 1254 |
| BstMAI | GTCTC | 5 cut(s) | 103, 162, 182, 1179, 1454 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 59, 332, 1030, 1127 |
| BstNI | CCWGG | 1 cut(s) | 1233 |
| BstNSI | RCATGY | 2 cut(s) | 98, 950 |
| BstSCI | CCNGG | 2 cut(s) | 1231, 1708 |
| BstSFI | CTRYAG | 3 cut(s) | 333, 606, 1262 |
| BstV1I | GCAGC | 5 cut(s) | 37, 592, 620, 1212, 1336 |
| BstX2I | RGATCY | 6 cut(s) | 29, 676, 1041, 1568, 1816, 1888 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 199 |
| BstYI | RGATCY | 6 cut(s) | 29, 676, 1041, 1568, 1816, 1888 |
| BstZ17I | GTATAC | 1 cut(s) | 798 |
| Bsu15I | ATCGAT | 1 cut(s) | 1161 |
| BsuRI | GGCC | 3 cut(s) | 785, 1634, 1837 |
| BsuTUI | ATCGAT | 1 cut(s) | 1161 |
| BtrI | CACGTC | 1 cut(s) | 314 |
| BtsCI | GGATG | 6 cut(s) | 49, 229, 548, 592, 760, 1643 |
| BtsI | GCAGTG | 2 cut(s) | 1337, 1737 |
| BtsIMutI | CAGTG | 6 cut(s) | 33, 637, 689, 1337, 1404, 1737 |
| Cac8I | GCNNGC | 4 cut(s) | 106, 110, 114, 825 |
| CciI | TCATGA | 1 cut(s) | 814 |
| CfoI | GCGC | 1 cut(s) | 1254 |
| Cfr10I | RCCGGY | 2 cut(s) | 104, 145 |
| Cfr13I | GGNCC | 1 cut(s) | 1836 |
| ClaI | ATCGAT | 1 cut(s) | 1161 |
| Csp6I | GTAC | 5 cut(s) | 330, 560, 720, 1762, 1847 |
| CspAI | ACCGGT | 1 cut(s) | 145 |
| CviAII | CATG | 9 cut(s) | 95, 178, 382, 815, 947, 1000, 1046, 1373, 1472 |
| CviQI | GTAC | 5 cut(s) | 330, 560, 720, 1762, 1847 |
| DdeI | CTNAG | 7 cut(s) | 291, 629, 681, 735, 787, 1413, 1679 |
| Eam1104I | CTCTTC | 4 cut(s) | 926, 987, 1278, 1846 |
| EarI | CTCTTC | 4 cut(s) | 926, 987, 1278, 1846 |
| EciI | GGCGGA | 1 cut(s) | 871 |
| Ecl136II | GAGCTC | 1 cut(s) | 309 |
| Eco130I | CCWWGG | 1 cut(s) | 370 |
| Eco24I | GRGCYC | 1 cut(s) | 311 |
| Eco31I | GGTCTC | 2 cut(s) | 162, 182 |
| Eco53kI | GAGCTC | 1 cut(s) | 309 |
| EcoICRI | GAGCTC | 1 cut(s) | 309 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 509 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1836 |
| EcoRII | CCWGG | 1 cut(s) | 1231 |
| EcoT14I | CCWWGG | 1 cut(s) | 370 |
| EcoT38I | GRGCYC | 1 cut(s) | 311 |
| ErhI | CCWWGG | 1 cut(s) | 370 |
| FaeI | CATG | 9 cut(s) | 98, 181, 385, 818, 950, 1003, 1049, 1376, 1475 |
| FaqI | GGGAC | 1 cut(s) | 1280 |
| FatI | CATG | 9 cut(s) | 94, 177, 381, 814, 946, 999, 1045, 1372, 1471 |
| FauI | CCCGC | 1 cut(s) | 1114 |
| FbaI | TGATCA | 1 cut(s) | 216 |
| FblI | GTMKAC | 1 cut(s) | 797 |
| Fnu4HI | GCNGC | 5 cut(s) | 51, 606, 609, 1226, 1350 |
| FokI | GGATG | 6 cut(s) | 56, 236, 535, 599, 767, 1630 |
| FriOI | GRGCYC | 1 cut(s) | 311 |
| Fsp4HI | GCNGC | 5 cut(s) | 51, 606, 609, 1226, 1350 |
| FspBI | CTAG | 3 cut(s) | 255, 399, 981 |
| GlaI | GCGC | 1 cut(s) | 1253 |
| GluI | GCNGC | 5 cut(s) | 51, 606, 609, 1226, 1350 |
| GsuI | CTGGAG | 1 cut(s) | 438 |
| HaeIII | GGCC | 3 cut(s) | 785, 1634, 1837 |
| HapII | CCGG | 5 cut(s) | 69, 105, 146, 185, 1709 |
| HhaI | GCGC | 1 cut(s) | 1254 |
| Hin1II | CATG | 9 cut(s) | 98, 181, 385, 818, 950, 1003, 1049, 1376, 1475 |
| Hin6I | GCGC | 1 cut(s) | 1252 |
| HinP1I | GCGC | 1 cut(s) | 1252 |
| HincII | GTYRAC | 1 cut(s) | 1537 |
| HindII | GTYRAC | 1 cut(s) | 1537 |
| HindIII | AAGCTT | 1 cut(s) | 1007 |
| HinfI | GANTC | 7 cut(s) | 72, 394, 536, 934, 985, 1493, 1563 |
| HpaII | CCGG | 5 cut(s) | 69, 105, 146, 185, 1709 |
| HphI | GGTGA | 1 cut(s) | 135 |
| Hpy166II | GTNNAC | 5 cut(s) | 124, 798, 1015, 1537, 1906 |
| Hpy188I | TCNGA | 9 cut(s) | 301, 393, 553, 662, 738, 1391, 1414, 1440, 1568 |
| Hpy8I | GTNNAC | 5 cut(s) | 124, 798, 1015, 1537, 1906 |
| HpyAV | CCTTC | 6 cut(s) | 86, 340, 475, 548, 742, 1803 |
| HpyCH4III | ACNGT | 6 cut(s) | 37, 141, 1266, 1294, 1640, 1660 |
| HpyCH4IV | ACGT | 2 cut(s) | 313, 1211 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 59, 332, 1030, 1127 |
| HpyF3I | CTNAG | 7 cut(s) | 291, 629, 681, 735, 787, 1413, 1679 |
| HpySE526I | ACGT | 2 cut(s) | 313, 1211 |
| Hsp92II | CATG | 9 cut(s) | 98, 181, 385, 818, 950, 1003, 1049, 1376, 1475 |
| HspAI | GCGC | 1 cut(s) | 1252 |
| KroI | GCCGGC | 1 cut(s) | 104 |
| KroNI | GCCGGC | 1 cut(s) | 106 |
| Ksp22I | TGATCA | 1 cut(s) | 216 |
| LguI | GCTCTTC | 1 cut(s) | 1278 |
| LmnI | GCTCC | 2 cut(s) | 20, 1875 |
| Lsp1109I | GCAGC | 5 cut(s) | 37, 592, 620, 1212, 1336 |
| LweI | GCATC | 2 cut(s) | 745, 759 |
| MaeI | CTAG | 3 cut(s) | 255, 399, 981 |
| MaeII | ACGT | 2 cut(s) | 313, 1211 |
| MaeIII | GTNAC | 3 cut(s) | 141, 148, 421 |
| MboII | GAAGA | 7 cut(s) | 635, 943, 973, 1004, 1295, 1676, 1833 |
| MfeI | CAATTG | 3 cut(s) | 474, 743, 1344 |
| MflI | RGATCY | 6 cut(s) | 29, 676, 1041, 1568, 1816, 1888 |
| MhlI | GDGCHC | 2 cut(s) | 311, 1290 |
| MlyI | GAGTC | 3 cut(s) | 545, 943, 1502 |
| MmeI | TCCRAC | 4 cut(s) | 342, 1369, 1531, 1820 |
| MroNI | GCCGGC | 1 cut(s) | 104 |
| MseI | TTAA | 7 cut(s) | 87, 569, 917, 1278, 1578, 1655, 1772 |
| MslI | CAYNNNNRTG | 1 cut(s) | 476 |
| MspA1I | CMGCKG | 2 cut(s) | 611, 803 |
| MspI | CCGG | 5 cut(s) | 69, 105, 146, 185, 1709 |
| MspR9I | CCNGG | 2 cut(s) | 1233, 1710 |
| MunI | CAATTG | 3 cut(s) | 474, 743, 1344 |
| Mva1269I | GAATGC | 1 cut(s) | 240 |
| MvaI | CCWGG | 1 cut(s) | 1233 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 59, 332, 1030, 1127 |
| NaeI | GCCGGC | 1 cut(s) | 106 |
| NciI | CCSGG | 1 cut(s) | 1710 |
| NgoMIV | GCCGGC | 1 cut(s) | 104 |
| NlaIII | CATG | 9 cut(s) | 98, 181, 385, 818, 950, 1003, 1049, 1376, 1475 |
| NlaIV | GGNNCC | 2 cut(s) | 183, 204 |
| NmeAIII | GCCGAG | 1 cut(s) | 949 |
| NmuCI | GTSAC | 2 cut(s) | 141, 421 |
| NspI | RCATGY | 2 cut(s) | 98, 950 |
| NspV | TTCGAA | 1 cut(s) | 1915 |
| OliI | CACNNNNGTG | 1 cut(s) | 476 |
| PagI | TCATGA | 1 cut(s) | 814 |
| PciI | ACATGT | 1 cut(s) | 94 |
| PciSI | GCTCTTC | 1 cut(s) | 1278 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1167 |
| PctI | GAATGC | 1 cut(s) | 240 |
| PdiI | GCCGGC | 1 cut(s) | 106 |
| PfeI | GAWTC | 4 cut(s) | 72, 394, 985, 1563 |
| PinAI | ACCGGT | 1 cut(s) | 145 |
| PkrI | GCNGC | 5 cut(s) | 52, 607, 610, 1227, 1351 |
| PleI | GAGTC | 3 cut(s) | 544, 942, 1501 |
| PpsI | GAGTC | 3 cut(s) | 544, 942, 1501 |
| PscI | ACATGT | 1 cut(s) | 94 |
| Psp124BI | GAGCTC | 1 cut(s) | 311 |
| Psp6I | CCWGG | 1 cut(s) | 1231 |
| PspGI | CCWGG | 1 cut(s) | 1231 |
| PspN4I | GGNNCC | 2 cut(s) | 183, 204 |
| PspPI | GGNCC | 1 cut(s) | 1836 |
| PstI | CTGCAG | 2 cut(s) | 337, 610 |
| PsuI | RGATCY | 6 cut(s) | 29, 676, 1041, 1568, 1816, 1888 |
| PvuII | CAGCTG | 2 cut(s) | 611, 803 |
| RsaI | GTAC | 5 cut(s) | 331, 561, 721, 1763, 1848 |
| RsaNI | GTAC | 5 cut(s) | 330, 560, 720, 1762, 1847 |
| RseI | CAYNNNNRTG | 1 cut(s) | 476 |
| SacI | GAGCTC | 1 cut(s) | 311 |
| SapI | GCTCTTC | 1 cut(s) | 1278 |
| SaqAI | TTAA | 7 cut(s) | 87, 569, 917, 1278, 1578, 1655, 1772 |
| SatI | GCNGC | 5 cut(s) | 51, 606, 609, 1226, 1350 |
| Sau96I | GGNCC | 1 cut(s) | 1836 |
| SchI | GAGTC | 3 cut(s) | 545, 943, 1502 |
| ScrFI | CCNGG | 2 cut(s) | 1233, 1710 |
| SduI | GDGCHC | 2 cut(s) | 311, 1290 |
| SfaNI | GCATC | 2 cut(s) | 745, 759 |
| SfcI | CTRYAG | 3 cut(s) | 333, 606, 1262 |
| SfuI | TTCGAA | 1 cut(s) | 1915 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 476 |
| SmlI | CTYRAG | 1 cut(s) | 1505 |
| SmoI | CTYRAG | 1 cut(s) | 1505 |
| SsiI | CCGC | 2 cut(s) | 856, 1121 |
| SspI | AATATT | 2 cut(s) | 58, 1147 |
| SspMI | CTAG | 3 cut(s) | 255, 399, 981 |
| SstI | GAGCTC | 1 cut(s) | 311 |
| StyD4I | CCNGG | 2 cut(s) | 1231, 1708 |
| StyI | CCWWGG | 1 cut(s) | 370 |
| TaaI | ACNGT | 6 cut(s) | 37, 141, 1266, 1294, 1640, 1660 |
| TaiI | ACGT | 2 cut(s) | 316, 1214 |
| TaqI | TCGA | 5 cut(s) | 23, 575, 1161, 1900, 1915 |
| TaqII | GACCGA | 1 cut(s) | 1167 |
| TfiI | GAWTC | 4 cut(s) | 72, 394, 985, 1563 |
| Tru1I | TTAA | 7 cut(s) | 87, 569, 917, 1278, 1578, 1655, 1772 |
| Tru9I | TTAA | 7 cut(s) | 87, 569, 917, 1278, 1578, 1655, 1772 |
| TscAI | CASTG | 6 cut(s) | 40, 637, 689, 1337, 1411, 1744 |
| TseFI | GTSAC | 2 cut(s) | 141, 421 |
| TseI | GCWGC | 5 cut(s) | 50, 605, 608, 1225, 1349 |
| Tsp45I | GTSAC | 2 cut(s) | 141, 421 |
| TspDTI | ATGAA | 4 cut(s) | 166, 603, 1062, 1433 |
| TspGWI | ACGGA | 2 cut(s) | 236, 1834 |
| TspRI | CASTG | 6 cut(s) | 40, 637, 689, 1337, 1411, 1744 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 509 |
| XapI | RAATTY | 3 cut(s) | 441, 565, 1730 |
| XbaI | TCTAGA | 1 cut(s) | 254 |
| XceI | RCATGY | 2 cut(s) | 98, 950 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 1052, 1547 |
| XmiI | GTMKAC | 1 cut(s) | 797 |
| XspI | CTAG | 3 cut(s) | 255, 399, 981 |