Prupe.8G052300_v2.0.a1

Domain of unknown function (DUF3475)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
OG0000458
Physical Location & Seq
Forward (+)
5742926 .. 5754062
11137 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G052300.4

Sequence Viewer

Length: 1989 bp
ATGAAATATACTTTGTGGCTTATCAACACAATGGGTGGGATGTGCTCCAAGTCGAGGAGATCCACTGTAGACGATGTCACTGTAAATAATGCTCCCAGCGGAAGCATTCCTACTGCTAATGGCCATTCAAGTAATGGGTCTCGTGGTCTGCCCCTAAAAGTGAATACGAATTCAACACCGTCTCCGGTTAGTGATGGCATGGATAAGAAATTGCGAGACCCGTTTATGTTGCCAGAGACAAATAGTATGGTTCCTTATGGGCTGATTACAGATGATGTCAATGATGGGATTCCTCACTTGTCCAGGGCCTTGTCGCAGAAAAATAGATCTACCAAATCTAAGCAGGCTGTTGCAAAGGTATCAGAAGTGAGCTCGCTTTTGGGTAGGGCTGGTACTGCTGGCCTTGGGAAAGCAGTGGAAGTATTGGACACCCTTGGTAGTAGTATGACAAATTTGAACCCAAGCAGTGGTTTTACCTCAGGGGTGACAACAAAAGGGATTAAAATTTCAATTTTGGCTTTTGAAGTTGCGAACACAGTTGTCAAGGGTTCAAACTTAATGCAATCCCTTTCAAAGGATAATATCAAACATTTGAAAGAGGTTGTGCTTCCATCAGAAGGGGTACAAAATTTAGTGTCGAGAGATATGGATGAACTCCTGAGAATTGCTGCAGCAGACAAGAGAGAAGAACTGAAAGTTTTCTCTGGAGAAGTAGTGCGTTTTGGAAATCGTTGTAAAGATCCTCAATGGCACAATTTGGATCGCTATTTTGAGAAGTTGGGTTCAGAAATTACACCCCAGAGGCAATTGAAGGATGATGCAGAGACAGTGATGCAGCAATTGATGACCTTAGTTCAAAATACAGCTGAATTATATCATGAGTTACATGCCTTGGACAGATTTGAACAAGATTATCGGCGTAAGCTTCAAGAGGAAGACAACTCAAATACCACCCAAAGAGGAGACAGCCTTGCAATCTTAAGAGCAGAGTTGAAGAGTCAAAGGAAGCATGTGAGAAGTTTGAAGAAAAAGTCACTCTGGTCCAGGATTTTGGAAGAGGTCATGGAGAAACTTGTCGACGTTGTGCATTTCTTACATTTGGAAATTCATGAAGCATTTGGTAATGCAGATACTGATAAACCTGTGAAAGGTGTTCAGAACAATCACAAAAAGTTGGGGTCTGCTGGTCTTGCATTGCATTATGCAAATATTATCTCTCAAATCGATACTCTTGTGTCTCGATCAAGTTCTGTGCCTCCAAACACACGGGATAATTTATATCAGGGGCTGCCACCTGGTGTAAAGTCAGCTTTGCGCTCAAAGCTACAGTCATTTCAGGTTAAGGAAGAGCATACAGTCCCTGAAATCAAAGCTGAAATGGAGAAAACATTGCAGTGGCTAGTTCCCATTGCCACTAACACAACCAAAGCTCATCATGGCTTTGGTTGGGTTGGAGAATGGGCAAACACTGGGTCTGAGATGAACCGAAAGCCTGCTGGTCAGACCGACTTGCTGAGGATTGAGACACTACACCATGCTGATAAAAGTAAAACTGAGTTTTACATTCTCGAACTGGTGGTGTGGCTTCATCATCTGGTCAGCCAAGTGAGGGTTGGAAACAGTGGAATTAGATCTCCCGTTAAATCCCCTCTTTGCTCCCCAAACCAGAAGGCAATTCAGTTATCGACGAACAAACCCAACTGTCCATCCCCCATATTAACAGTTGAGGACCAAGAAATGCTTCGATATGTAAGTAAGAGAAAACTTACGCCTGGCATTAGTAAGAGTCAGGAATTTGACACTGCAAAGAACAGATTCAGCAAGTATAATAGGCTGAGTAAGAGTAGTAATCACTCCCCAACAAGTGAACGGAGGAAGGATCCATTTCCCATAAGGAGGCCATCGTCCGTTCCGGTCATTGACTTTGATATCGACCGGATCAAAGCTTTAGATGTCATTGATCGAGTGGACACGATTCGAAGTATTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03013 ko03015 ko03040 ko05164 map03013 map03015 map03040 map05164
Pfam Domains
Protein Families
DUF3475 DUF668

Protein Analysis

663

Amino Acids

73.82

Weight (kDa)

9.42

Isoelectric Point (pI)

44.28

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000458)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G34320 AT1G34320
fragaria_vesca FvH4_2g12340 FvH4_2g12350 FvH4_2g12350 FvH4_2g12350 FvH4_2g12350 FvH4_5g36070 FvH4_5g36100 FvH4_5g36130 FvH4_5g36140
malus_domestica MD05G1039900.v1.1 MD10G1045400.v1.1 MD10G1045600.v1.1 MD10G1045700.v1.1 MD10G1045800.v1.1 MD12G1057900.v1.1
prunus_persica Prupe.1G525500_v2.0.a1 Prupe.8G052300_v2.0.a1 Prupe.8G052300_v2.0.a1 Prupe.8G052300_v2.0.a1 Prupe.8G052300_v2.0.a1 Prupe.8G052300_v2.0.a1 Prupe.8G052300_v2.0.a1 Prupe.8G052600_v2.0.a1 Prupe.8G052600_v2.0.a1 Prupe.8G052600_v2.0.a1 Prupe.8G052600_v2.0.a1 Prupe.8G052600_v2.0.a1 Prupe.8G052600_v2.0.a1 Prupe.8G052600_v2.0.a1
pyrus_communis pycom05g03250 pycom10g03180 pycom10g03190 pycom15g33960
rosa_chinensis RchiOBHm_Chr3g0484671 RchiOBHm_Chr6g0272351 RchiOBHm_Chr6g0272361 RchiOBHm_Chr7g0237881
rosa_laevigata RLG00000000952 RLG00000000960 RLG00000001025 RLG00000008689 RLG00000010609 RLG00000013679 RLG00000013680
rosa_multiflora Rmu_sc0001339.1_g000015 Rmu_sc0002877.1_g000020 Rmu_sc0009379.1_g000003 Rmu_ssc0000199.1_g000001 Rmu_ssc0000321.1_g000001
rosa_roxburghii Rroxscaffold_1G00039160 Rroxscaffold_3G00223500 Rroxscaffold_3G00223670 Rroxscaffold_7G00196370 Rroxscaffold_7G00196380
rosa_rugosa Rorug06G0068200 Rorug06G0068300 Rorug06G0068400 Rorug07G0302100 Rorug07G0308600 Rorug07G0309200.1
rosa_samantha Rh3AG263300 Rh3DG292000 Rh6AG113700 Rh6AG184400 Rh6AG184500 Rh6BG187800 Rh6BG187900 Rh6CG185900 Rh6DG177600 Rh6DG177700 Rh7AG458500 Rh7AG464200 Rh7AG464500 Rh7BG429200 Rh7BG434200 Rh7CG476400 Rh7CG481600 Rh7CG482700 Rh7DG445700 Rh7DG450300 Rh7DG451400
rosa_wichuraiana Rw0G019450 Rw6G015900 Rw6G015910 Rw6G015940 Rw6G015950 Rw7G037980 Rw7G038410 Rw7G038470

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 467
AccI GTMKAC 2 cut(s) 69, 1077
AciI CCGC 1 cut(s) 99
AclWI GGATC 6 cut(s) 54, 734, 768, 1874, 1887, 1946
AcoI YGGCCR 1 cut(s) 121
AcsI RAATTY 6 cut(s) 169, 451, 504, 628, 1104, 1793
AdeI CACNNNGTG 1 cut(s) 1298
AfaI GTAC 2 cut(s) 394, 624
AfiI CCNNNNNNNGG 7 cut(s) 54, 467, 574, 617, 1148, 1609, 1896
AflII CTTAAG 1 cut(s) 979
AjnI CCWGG 4 cut(s) 302, 1043, 1294, 1771
AjuI GAANNNNNNNTTGG 2 cut(s) 1725, 1757
AluBI AGCT 8 cut(s) 372, 866, 925, 1310, 1324, 1373, 1430, 1946
AluI AGCT 8 cut(s) 372, 866, 925, 1310, 1324, 1373, 1430, 1946
Alw21I GWGCWC 2 cut(s) 47, 374
Alw26I GTCTC 8 cut(s) 144, 186, 210, 230, 818, 957, 1242, 1517
AlwI GGATC 6 cut(s) 54, 734, 768, 1874, 1887, 1946
AlwNI CAGNNNCTG 3 cut(s) 1133, 1288, 1361
AoxI GGCC 4 cut(s) 121, 306, 400, 1898
ApeKI GCWGC 4 cut(s) 668, 671, 835, 1288
ApoI RAATTY 6 cut(s) 169, 451, 504, 628, 1104, 1793
ArsI GACNNNNNNTTYG 4 cut(s) 1313, 1345, 1457, 1489
Asp700I GAANNNNTTC 3 cut(s) 698, 1740, 1814
AspLEI GCGC 1 cut(s) 1317
AspS9I GGNCC 3 cut(s) 306, 1041, 1729
AsuHPI GGTGA 1 cut(s) 496
AsuII TTCGAA 1 cut(s) 1978
AvaII GGWCC 2 cut(s) 1041, 1729
AxyI CCTNAGG 1 cut(s) 478
BaeI ACNNNNGTAYC 2 cut(s) 1218, 1251
BalI TGGCCA 1 cut(s) 123
BamHI GGATCC 1 cut(s) 1879
BanII GRGCYC 1 cut(s) 374
BarI GAAGNNNNNNTAC 2 cut(s) 94, 126
BauI CACGAG 1 cut(s) 141
BbsI GAAGAC 1 cut(s) 942
Bbv12I GWGCWC 2 cut(s) 47, 374
BbvCI CCTCAGC 1 cut(s) 1514
BbvI GCAGC 4 cut(s) 655, 683, 847, 1275
BccI CCATC 5 cut(s) 188, 278, 619, 1714, 1909
BciT130I CCWGG 4 cut(s) 304, 1045, 1296, 1773
BcoDI GTCTC 8 cut(s) 144, 186, 210, 230, 818, 957, 1242, 1517
BfaI CTAG 1 cut(s) 1400
BfmI CTRYAG 3 cut(s) 66, 669, 1325
BfrI CTTAAG 1 cut(s) 979
BglII AGATCT 2 cut(s) 326, 1631
BisI GCNGC 4 cut(s) 669, 672, 836, 1289
BlsI GCNGC 4 cut(s) 670, 673, 837, 1290
Bme1390I CCNGG 4 cut(s) 304, 1045, 1296, 1773
Bme18I GGWCC 2 cut(s) 1041, 1729
BmgT120I GGNCC 3 cut(s) 306, 1041, 1729
BmiI GGNNCC 2 cut(s) 252, 1881
BmrFI CCNGG 4 cut(s) 304, 1045, 1296, 1773
BmrI ACTGGG 1 cut(s) 1479
BmsI GCATC 2 cut(s) 808, 822
BmuI ACTGGG 1 cut(s) 1479
BpiI GAAGAC 1 cut(s) 942
BpmI CTGGAG 1 cut(s) 726
Bpu10I CCTNAGC 1 cut(s) 1514
Bpu14I TTCGAA 1 cut(s) 1978
Bsa29I ATCGAT 1 cut(s) 1224
BsaI GGTCTC 2 cut(s) 144, 210
BsaJI CCNNGG 4 cut(s) 303, 403, 433, 891
BsaWI WCCGGW 3 cut(s) 184, 1912, 1935
BsaXI ACNNNNNCTCC 4 cut(s) 166, 196, 699, 729
Bsc4I CCNNNNNNNGG 7 cut(s) 54, 467, 574, 617, 1148, 1609, 1896
Bse1I ACTGG 2 cut(s) 1474, 1578
Bse21I CCTNAGG 1 cut(s) 478
Bse3DI GCAATG 3 cut(s) 1193, 1388, 1407
BseBI CCWGG 4 cut(s) 304, 1045, 1296, 1773
BseCI ATCGAT 1 cut(s) 1224
BseDI CCNNGG 4 cut(s) 303, 403, 433, 891
BseGI GGATG 4 cut(s) 45, 655, 820, 1706
BseLI CCNNNNNNNGG 7 cut(s) 54, 467, 574, 617, 1148, 1609, 1896
BseMI GCAATG 3 cut(s) 1193, 1388, 1407
BseMII CTCAG 6 cut(s) 492, 650, 1467, 1505, 1545, 1826
BseNI ACTGG 2 cut(s) 1474, 1578
BseRI GAGGAG 2 cut(s) 70, 975
BseXI GCAGC 4 cut(s) 655, 683, 847, 1275
BseYI CCCAGC 1 cut(s) 95
Bsh1285I CGRYCG 1 cut(s) 1936
BshFI GGCC 4 cut(s) 123, 308, 402, 1900
BshVI ATCGAT 1 cut(s) 1224
BsiEI CGRYCG 1 cut(s) 1936
BsiHKAI GWGCWC 2 cut(s) 47, 374
BsiSI CCGG 3 cut(s) 185, 1913, 1936
BslFI GGGAC 1 cut(s) 1343
BslI CCNNNNNNNGG 7 cut(s) 54, 467, 574, 617, 1148, 1609, 1896
BsmAI GTCTC 8 cut(s) 144, 186, 210, 230, 818, 957, 1242, 1517
BsmBI CGTCTC 1 cut(s) 186
BsmFI GGGAC 1 cut(s) 1343
BsmI GAATGC 1 cut(s) 105
BsnI GGCC 4 cut(s) 123, 308, 402, 1900
Bso31I GGTCTC 2 cut(s) 144, 210
Bsp119I TTCGAA 1 cut(s) 1978
Bsp1286I GDGCHC 2 cut(s) 47, 374
Bsp143I GATC 9 cut(s) 59, 326, 739, 760, 1241, 1631, 1879, 1938, 1960
BspACI CCGC 1 cut(s) 99
BspANI GGCC 4 cut(s) 123, 308, 402, 1900
BspCNI CTCAG 6 cut(s) 491, 651, 1468, 1506, 1546, 1827
BspDI ATCGAT 1 cut(s) 1224
BspHI TCATGA 2 cut(s) 877, 1108
BspLI GGNNCC 2 cut(s) 252, 1881
BspMAI CTGCAG 1 cut(s) 673
BspPI GGATC 6 cut(s) 54, 734, 768, 1874, 1887, 1946
BspQI GCTCTTC 1 cut(s) 1341
BspT104I TTCGAA 1 cut(s) 1978
BspTI CTTAAG 1 cut(s) 979
BspTNI GGTCTC 2 cut(s) 144, 210
BsrDI GCAATG 3 cut(s) 1193, 1388, 1407
BsrI ACTGG 2 cut(s) 1474, 1578
BssECI CCNNGG 4 cut(s) 303, 403, 433, 891
BssMI GATC 9 cut(s) 59, 326, 739, 760, 1241, 1631, 1879, 1938, 1960
BssSI CACGAG 1 cut(s) 141
BssT1I CCWWGG 3 cut(s) 403, 433, 891
Bst2BI CACGAG 1 cut(s) 141
Bst2UI CCWGG 4 cut(s) 304, 1045, 1296, 1773
Bst6I CTCTTC 3 cut(s) 989, 1050, 1341
BstAFI CTTAAG 1 cut(s) 979
BstBI TTCGAA 1 cut(s) 1978
BstC8I GCNNGC 4 cut(s) 345, 374, 400, 1494
BstDEI CTNAG 8 cut(s) 339, 478, 659, 850, 1476, 1514, 1554, 1835
BstENI CCTNNNNNAGG 2 cut(s) 572, 1146
BstF5I GGATG 4 cut(s) 45, 655, 820, 1706
BstHHI GCGC 1 cut(s) 1317
BstKTI GATC 9 cut(s) 62, 329, 742, 763, 1244, 1634, 1882, 1941, 1963
BstMAI GTCTC 8 cut(s) 144, 186, 210, 230, 818, 957, 1242, 1517
BstMBI GATC 9 cut(s) 59, 326, 739, 760, 1241, 1631, 1879, 1938, 1960
BstMCI CGRYCG 1 cut(s) 1936
BstMWI GCNNNNNNNGC 3 cut(s) 395, 1190, 1321
BstNI CCWGG 4 cut(s) 304, 1045, 1296, 1773
BstNSI RCATGY 2 cut(s) 890, 1013
BstSCI CCNGG 4 cut(s) 302, 1043, 1294, 1771
BstSFI CTRYAG 3 cut(s) 66, 669, 1325
BstV1I GCAGC 4 cut(s) 655, 683, 847, 1275
BstV2I GAAGAC 1 cut(s) 942
BstX2I RGATCY 5 cut(s) 59, 326, 739, 1631, 1879
BstXI CCANNNNNNTGG 1 cut(s) 1051
BstYI RGATCY 5 cut(s) 59, 326, 739, 1631, 1879
Bsu15I ATCGAT 1 cut(s) 1224
Bsu36I CCTNAGG 1 cut(s) 478
BsuRI GGCC 4 cut(s) 123, 308, 402, 1900
BsuTUI ATCGAT 1 cut(s) 1224
BtsCI GGATG 4 cut(s) 45, 655, 820, 1706
BtsI GCAGTG 4 cut(s) 420, 472, 1400, 1800
BtsIMutI CAGTG 9 cut(s) 63, 78, 420, 472, 834, 1400, 1467, 1627, 1800
Cac8I GCNNGC 4 cut(s) 345, 374, 400, 1494
CaiI CAGNNNCTG 3 cut(s) 1133, 1288, 1361
CciI TCATGA 2 cut(s) 877, 1108
CfoI GCGC 1 cut(s) 1317
Cfr13I GGNCC 3 cut(s) 306, 1041, 1729
ClaI ATCGAT 1 cut(s) 1224
CsiI ACCWGGT 1 cut(s) 1294
Csp6I GTAC 2 cut(s) 393, 623
CviAII CATG 8 cut(s) 199, 878, 887, 1010, 1063, 1109, 1436, 1535
CviQI GTAC 2 cut(s) 393, 623
DdeI CTNAG 8 cut(s) 339, 478, 659, 850, 1476, 1514, 1554, 1835
DpnI GATC 9 cut(s) 61, 328, 741, 762, 1243, 1633, 1881, 1940, 1962
DpnII GATC 9 cut(s) 59, 326, 739, 760, 1241, 1631, 1879, 1938, 1960
DraIII CACNNNGTG 1 cut(s) 1298
EaeI YGGCCR 1 cut(s) 121
Eam1104I CTCTTC 3 cut(s) 989, 1050, 1341
EarI CTCTTC 3 cut(s) 989, 1050, 1341
Ecl136II GAGCTC 1 cut(s) 372
Eco130I CCWWGG 3 cut(s) 403, 433, 891
Eco24I GRGCYC 1 cut(s) 374
Eco31I GGTCTC 2 cut(s) 144, 210
Eco32I GATATC 1 cut(s) 1930
Eco47I GGWCC 2 cut(s) 1041, 1729
Eco53kI GAGCTC 1 cut(s) 372
Eco81I CCTNAGG 1 cut(s) 478
EcoICRI GAGCTC 1 cut(s) 372
EcoNI CCTNNNNNAGG 2 cut(s) 572, 1146
EcoO109I RGGNCCY 1 cut(s) 306
EcoRI GAATTC 1 cut(s) 169
EcoRII CCWGG 4 cut(s) 302, 1043, 1294, 1771
EcoRV GATATC 1 cut(s) 1930
EcoT14I CCWWGG 3 cut(s) 403, 433, 891
EcoT38I GRGCYC 1 cut(s) 374
ErhI CCWWGG 3 cut(s) 403, 433, 891
Esp3I CGTCTC 1 cut(s) 186
FaeI CATG 8 cut(s) 202, 881, 890, 1013, 1066, 1112, 1439, 1538
FalI AAGNNNNNCTT 2 cut(s) 1725, 1757
FaqI GGGAC 1 cut(s) 1343
FatI CATG 8 cut(s) 198, 877, 886, 1009, 1062, 1108, 1435, 1534
FblI GTMKAC 2 cut(s) 69, 1077
Fnu4HI GCNGC 4 cut(s) 669, 672, 836, 1289
FokI GGATG 4 cut(s) 52, 662, 827, 1693
FriOI GRGCYC 1 cut(s) 374
Fsp4HI GCNGC 4 cut(s) 669, 672, 836, 1289
FspBI CTAG 1 cut(s) 1400
GlaI GCGC 1 cut(s) 1316
GluI GCNGC 4 cut(s) 669, 672, 836, 1289
GsaI CCCAGC 1 cut(s) 99
GsuI CTGGAG 1 cut(s) 726
HaeIII GGCC 4 cut(s) 123, 308, 402, 1900
HapII CCGG 3 cut(s) 185, 1913, 1936
HhaI GCGC 1 cut(s) 1317
Hin1II CATG 8 cut(s) 202, 881, 890, 1013, 1066, 1112, 1439, 1538
Hin6I GCGC 1 cut(s) 1315
HinP1I GCGC 1 cut(s) 1315
HincII GTYRAC 1 cut(s) 1078
HindII GTYRAC 1 cut(s) 1078
HindIII AAGCTT 2 cut(s) 923, 1944
HinfI GANTC 5 cut(s) 289, 997, 1786, 1815, 1975
HpaII CCGG 3 cut(s) 185, 1913, 1936
HphI GGTGA 1 cut(s) 496
Hpy166II GTNNAC 4 cut(s) 70, 1078, 1868, 1969
Hpy188I TCNGA 6 cut(s) 364, 616, 787, 1158, 1477, 1503
Hpy188III TCNNGA 9 cut(s) 639, 658, 705, 878, 929, 1109, 1239, 1568, 1790
Hpy8I GTNNAC 4 cut(s) 70, 1078, 1868, 1969
Hpy99I CGWCG 2 cut(s) 1082, 1690
HpyAV CCTTC 4 cut(s) 611, 805, 1663, 1870
HpyCH4IV ACGT 1 cut(s) 1080
HpyF10VI GCNNNNNNNGC 3 cut(s) 395, 1190, 1321
HpyF3I CTNAG 8 cut(s) 339, 478, 659, 850, 1476, 1514, 1554, 1835
HpySE526I ACGT 1 cut(s) 1080
Hsp92II CATG 8 cut(s) 202, 881, 890, 1013, 1066, 1112, 1439, 1538
HspAI GCGC 1 cut(s) 1315
Kzo9I GATC 9 cut(s) 59, 326, 739, 760, 1241, 1631, 1879, 1938, 1960
LguI GCTCTTC 1 cut(s) 1341
LmnI GCTCC 3 cut(s) 50, 97, 1661
Lsp1109I GCAGC 4 cut(s) 655, 683, 847, 1275
LweI GCATC 2 cut(s) 808, 822
MabI ACCWGGT 1 cut(s) 1294
MaeI CTAG 1 cut(s) 1400
MaeII ACGT 1 cut(s) 1080
MaeIII GTNAC 4 cut(s) 76, 484, 882, 1032
MalI GATC 9 cut(s) 61, 328, 741, 762, 1243, 1633, 1881, 1940, 1962
MboI GATC 9 cut(s) 59, 326, 739, 760, 1241, 1631, 1879, 1938, 1960
MboII GAAGA 6 cut(s) 698, 947, 1006, 1036, 1067, 1358
MfeI CAATTG 2 cut(s) 806, 839
MflI RGATCY 5 cut(s) 59, 326, 739, 1631, 1879
MhlI GDGCHC 2 cut(s) 47, 374
MlsI TGGCCA 1 cut(s) 123
MluNI TGGCCA 1 cut(s) 123
MlyI GAGTC 2 cut(s) 1006, 1795
MmeI TCCRAC 2 cut(s) 1432, 1594
Mox20I TGGCCA 1 cut(s) 123
MroXI GAANNNNTTC 3 cut(s) 698, 1740, 1814
MscI TGGCCA 1 cut(s) 123
MseI TTAA 7 cut(s) 501, 557, 980, 1341, 1641, 1718, 1987
MslI CAYNNNNRTG 1 cut(s) 1393
Msp20I TGGCCA 1 cut(s) 123
MspA1I CMGCKG 2 cut(s) 99, 866
MspCI CTTAAG 1 cut(s) 979
MspI CCGG 3 cut(s) 185, 1913, 1936
MspR9I CCNGG 4 cut(s) 304, 1045, 1296, 1773
MunI CAATTG 2 cut(s) 806, 839
Mva1269I GAATGC 1 cut(s) 105
MvaI CCWGG 4 cut(s) 304, 1045, 1296, 1773
MwoI GCNNNNNNNGC 3 cut(s) 395, 1190, 1321
NdeII GATC 9 cut(s) 59, 326, 739, 760, 1241, 1631, 1879, 1938, 1960
NlaIII CATG 8 cut(s) 202, 881, 890, 1013, 1066, 1112, 1439, 1538
NlaIV GGNNCC 2 cut(s) 252, 1881
NmuCI GTSAC 3 cut(s) 76, 484, 1032
NspI RCATGY 2 cut(s) 890, 1013
NspV TTCGAA 1 cut(s) 1978
PagI TCATGA 2 cut(s) 877, 1108
PciSI GCTCTTC 1 cut(s) 1341
PctI GAATGC 1 cut(s) 105
PdmI GAANNNNTTC 3 cut(s) 698, 1740, 1814
PfeI GAWTC 3 cut(s) 289, 1815, 1975
PflFI GACNNNGTC 1 cut(s) 74
PflMI CCANNNNNTGG 1 cut(s) 467
PfoI TCCNGGA 1 cut(s) 1043
PkrI GCNGC 4 cut(s) 670, 673, 837, 1290
PleI GAGTC 2 cut(s) 1005, 1794
PpsI GAGTC 2 cut(s) 1005, 1794
Psp124BI GAGCTC 1 cut(s) 374
Psp6I CCWGG 4 cut(s) 302, 1043, 1294, 1771
PspFI CCCAGC 1 cut(s) 95
PspGI CCWGG 4 cut(s) 302, 1043, 1294, 1771
PspN4I GGNNCC 2 cut(s) 252, 1881
PspPI GGNCC 3 cut(s) 306, 1041, 1729
PstI CTGCAG 1 cut(s) 673
PstNI CAGNNNCTG 3 cut(s) 1133, 1288, 1361
PsuI RGATCY 5 cut(s) 59, 326, 739, 1631, 1879
PsyI GACNNNGTC 1 cut(s) 74
PvuII CAGCTG 1 cut(s) 866
RsaI GTAC 2 cut(s) 394, 624
RsaNI GTAC 2 cut(s) 393, 623
RseI CAYNNNNRTG 1 cut(s) 1393
SacI GAGCTC 1 cut(s) 374
SalI GTCGAC 1 cut(s) 1076
SapI GCTCTTC 1 cut(s) 1341
SaqAI TTAA 7 cut(s) 501, 557, 980, 1341, 1641, 1718, 1987
SatI GCNGC 4 cut(s) 669, 672, 836, 1289
Sau3AI GATC 9 cut(s) 59, 326, 739, 760, 1241, 1631, 1879, 1938, 1960
Sau96I GGNCC 3 cut(s) 306, 1041, 1729
SchI GAGTC 2 cut(s) 1006, 1795
ScrFI CCNGG 4 cut(s) 304, 1045, 1296, 1773
SduI GDGCHC 2 cut(s) 47, 374
SexAI ACCWGGT 1 cut(s) 1294
SfaNI GCATC 2 cut(s) 808, 822
SfcI CTRYAG 3 cut(s) 66, 669, 1325
SfuI TTCGAA 1 cut(s) 1978
SinI GGWCC 2 cut(s) 1041, 1729
SmiMI CAYNNNNRTG 1 cut(s) 1393
SmlI CTYRAG 1 cut(s) 979
SmoI CTYRAG 1 cut(s) 979
SsiI CCGC 1 cut(s) 99
SspI AATATT 1 cut(s) 1210
SspMI CTAG 1 cut(s) 1400
SstI GAGCTC 1 cut(s) 374
StyD4I CCNGG 4 cut(s) 302, 1043, 1294, 1771
StyI CCWWGG 3 cut(s) 403, 433, 891
TaiI ACGT 1 cut(s) 1083
TaqII GACCGA 1 cut(s) 1520
TfiI GAWTC 3 cut(s) 289, 1815, 1975
Tru1I TTAA 7 cut(s) 501, 557, 980, 1341, 1641, 1718, 1987
Tru9I TTAA 7 cut(s) 501, 557, 980, 1341, 1641, 1718, 1987
TscAI CASTG 9 cut(s) 70, 85, 420, 472, 834, 1400, 1474, 1627, 1807
TseFI GTSAC 3 cut(s) 76, 484, 1032
TseI GCWGC 4 cut(s) 668, 671, 835, 1288
Tsp45I GTSAC 3 cut(s) 76, 484, 1032
TspDTI ATGAA 6 cut(s) 17, 666, 1097, 1125, 1496, 1577
TspGWI ACGGA 2 cut(s) 1885, 1897
TspRI CASTG 9 cut(s) 70, 85, 420, 472, 834, 1400, 1474, 1627, 1807
Tth111I GACNNNGTC 1 cut(s) 74
Van91I CCANNNNNTGG 1 cut(s) 467
Vha464I CTTAAG 1 cut(s) 979
VpaK11BI GGWCC 2 cut(s) 1041, 1729
XagI CCTNNNNNAGG 2 cut(s) 572, 1146
XapI RAATTY 6 cut(s) 169, 451, 504, 628, 1104, 1793
XceI RCATGY 2 cut(s) 890, 1013
XcmI CCANNNNNNNNNTGG 2 cut(s) 131, 1610
XmiI GTMKAC 2 cut(s) 69, 1077
XmnI GAANNNNTTC 3 cut(s) 698, 1740, 1814
XspI CTAG 1 cut(s) 1400
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.