Rmu_sc0002877.1_g000020

proline-rich receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002877.1
Physical Location & Seq
Reverse (-)
41855 .. 43738
1884 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002877.1_g000020.1.cds

Sequence Viewer

Length: 1884 bp
atggccagttatccatactattccccgccaccaccaccttcatcgtatccttactactcaccaccaccaccaccaccttcaccaccatgtaacgaaactactacaacactcccacctccccccccacccccaccaccaccctcaccaccatgtaacgacactactccaactatatcaccacctttgccgcctccgctagcaccaccaccaccaccgccacaaatgccactgccaccaccaccttcatcttactactccccaccacaaccttcaccaccgccgccaccaccacctccatcatactactccccaccactactttcaccaccaccaccatcacccccaccaccaacttcagttccaccacctccaccttcaataccaccaccttcacaaccaccatcaccaccaccaccaccaggaccaccaccttcacacccatccactaaacatccaccacacaaactaccaccaccaccatcaccttcaccatcaggaccaccacctacactaccgccaccctcacatccaccccacaaactgccgccaccaccttcttcaccaccaccaccgccatcatcacatcccacaccttcaccatcatcaccaccacctaaagcacctacactacagccaccatctcatccatcaccttcaatatcgccaccattacatccaccaccttcaccatcacctttaccgcctactatgttgccaccttcacacccaccaccttcattgccacctccaccttcagtgcagccaccaagtccaccacctccggtgcagccaccatcaagtccaccacctccggtgccgccaccagcaagtcccccaccttcattgccaccgccattaagtccaccacttaaaccattaccacctcctcatcccgctccttcagttccaccaccatcacatccaccactttcaccattgtcaccgtcaccatcaccacctacactgccaccatcatacacaccaccaccttctctgttgccgccatcatcctcacccaagtttcctccgatactccccccagagccaccaatttgccagtgtgtatgcccagcaccaagtccttattataattcaattgccccatcaccgcaaagttcaccatctcatagccatcgcactgtttatcttgccacttttgtctctcttggtggattgttctttcttgcattccttgcaattggtctcttttgcttgcataagaagaagaaaaagtcaagggcagcatacggagatcaaggtgtttctcatgcagaggagcaaggagaagttcacacctttcagagcatccccacagctaaccagagtgtagctgtcaatatagatgatcaaaatccgaatgttgaaccgaaatcttatggtgacggcggtgaggaagcagaagaaaatgatcctgacaaaagtcctagtcatcgtaaacgtcctattcgtcgtcgtactagagcacaaggaaaaagagactccaatcacggtgacaagataattgctgcaattggtgctgattcaaatgaggaattagactccgaagatgatgatgaagaatcagatcaacctaaagattcagataaaagttctcgtcgccggaaacgtggttctagtgatcgcacccaaaaaagagagcctaaaacaaatcggaaccgtgatcataatggtgaccaaagtgtgtctgtcacaattgatgatgatgatgaagatccagatgtggaactggaatcgcaagaagatgacaataaatcaaatggttcagataaagattcgcgtcgtcgtgataaacgtgagtctggtcgacgtagtcgtgctcgaggaagcaaacacaaagagccttccacgtccaaccgtgataccgatgaccgcaaaacttcataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

627

Amino Acids

66.46

Weight (kDa)

6.86

Isoelectric Point (pI)

121.14

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000458)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G34320 AT1G34320
fragaria_vesca FvH4_2g12340 FvH4_2g12350 FvH4_2g12350 FvH4_2g12350 FvH4_2g12350 FvH4_5g36070 FvH4_5g36100 FvH4_5g36130 FvH4_5g36140
malus_domestica MD05G1039900.v1.1 MD10G1045400.v1.1 MD10G1045600.v1.1 MD10G1045700.v1.1 MD10G1045800.v1.1 MD12G1057900.v1.1
prunus_persica Prupe.1G525500_v2.0.a1 Prupe.8G052300_v2.0.a1 Prupe.8G052300_v2.0.a1 Prupe.8G052300_v2.0.a1 Prupe.8G052300_v2.0.a1 Prupe.8G052300_v2.0.a1 Prupe.8G052300_v2.0.a1 Prupe.8G052600_v2.0.a1 Prupe.8G052600_v2.0.a1 Prupe.8G052600_v2.0.a1 Prupe.8G052600_v2.0.a1 Prupe.8G052600_v2.0.a1 Prupe.8G052600_v2.0.a1 Prupe.8G052600_v2.0.a1
pyrus_communis pycom05g03250 pycom10g03180 pycom10g03190 pycom15g33960
rosa_chinensis RchiOBHm_Chr3g0484671 RchiOBHm_Chr6g0272351 RchiOBHm_Chr6g0272361 RchiOBHm_Chr7g0237881
rosa_laevigata RLG00000000952 RLG00000000960 RLG00000001025 RLG00000008689 RLG00000010609 RLG00000013679 RLG00000013680
rosa_multiflora Rmu_sc0001339.1_g000015 Rmu_sc0002877.1_g000020 Rmu_sc0009379.1_g000003 Rmu_ssc0000199.1_g000001 Rmu_ssc0000321.1_g000001
rosa_roxburghii Rroxscaffold_1G00039160 Rroxscaffold_3G00223500 Rroxscaffold_3G00223670 Rroxscaffold_7G00196370 Rroxscaffold_7G00196380
rosa_rugosa Rorug06G0068200 Rorug06G0068300 Rorug06G0068400 Rorug07G0302100 Rorug07G0308600 Rorug07G0309200.1
rosa_samantha Rh3AG263300 Rh3DG292000 Rh6AG113700 Rh6AG184400 Rh6AG184500 Rh6BG187800 Rh6BG187900 Rh6CG185900 Rh6DG177600 Rh6DG177700 Rh7AG458500 Rh7AG464200 Rh7AG464500 Rh7BG429200 Rh7BG434200 Rh7CG476400 Rh7CG481600 Rh7CG482700 Rh7DG445700 Rh7DG450300 Rh7DG451400
rosa_wichuraiana Rw0G019450 Rw6G015900 Rw6G015910 Rw6G015940 Rw6G015950 Rw7G037980 Rw7G038410 Rw7G038470

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1089
AccB1I GGYRCC 1 cut(s) 814
AccBSI CCGCTC 1 cut(s) 896
AccI GTMKAC 1 cut(s) 1804
AccII CGCG 1 cut(s) 1777
AclWI GGATC 2 cut(s) 1403, 1706
AcoI YGGCCR 1 cut(s) 3
AcuI CTGAAG 3 cut(s) 339, 738, 885
AfaI GTAC 1 cut(s) 1456
AfiI CCNNNNNNNGG 1 cut(s) 419
AgsI TTSAA 5 cut(s) 378, 657, 1095, 1364, 1524
AjiI CACGTC 1 cut(s) 1848
AjnI CCWGG 1 cut(s) 418
AloI GAACNNNNNNTCC 2 cut(s) 1594, 1626
AluBI AGCT 2 cut(s) 1316, 1331
AluI AGCT 2 cut(s) 1316, 1331
Alw21I GWGCWC 2 cut(s) 1465, 1819
Alw26I GTCTC 3 cut(s) 1165, 1208, 1470
AlwI GGATC 2 cut(s) 1403, 1706
Ama87I CYCGRG 1 cut(s) 1818
AoxI GGCC 1 cut(s) 3
ApeKI GCWGC 4 cut(s) 760, 787, 1241, 1505
AspS9I GGNCC 2 cut(s) 422, 497
AsuNHI GCTAGC 1 cut(s) 196
AvaI CYCGRG 1 cut(s) 1818
AvaII GGWCC 2 cut(s) 422, 497
BalI TGGCCA 1 cut(s) 5
BanI GGYRCC 1 cut(s) 814
Bbv12I GWGCWC 2 cut(s) 1465, 1819
BbvI GCAGC 4 cut(s) 772, 799, 1253, 1492
BceAI ACGGC 1 cut(s) 1399
BciT130I CCWGG 1 cut(s) 420
BciVI GTATCC 1 cut(s) 57
BclI TGATCA 2 cut(s) 1345, 1660
BcoDI GTCTC 3 cut(s) 1165, 1208, 1470
BfaI CTAG 4 cut(s) 197, 1425, 1458, 1614
BfmI CTRYAG 1 cut(s) 629
BfuI GTATCC 1 cut(s) 57
BisI GCNGC 9 cut(s) 188, 281, 545, 761, 788, 818, 1001, 1242, 1506
BlsI GCNGC 9 cut(s) 189, 282, 546, 762, 789, 819, 1002, 1243, 1507
Bme1390I CCNGG 1 cut(s) 420
Bme18I GGWCC 2 cut(s) 422, 497
BmeT110I CYCGRG 1 cut(s) 1818
BmgBI CACGTC 1 cut(s) 1848
BmgT120I GGNCC 2 cut(s) 422, 497
BmiI GGNNCC 2 cut(s) 816, 1655
BmrFI CCNGG 1 cut(s) 420
BmsI GCATC 1 cut(s) 1314
BmtI GCTAGC 1 cut(s) 200
BoxI GACNNNNGTC 1 cut(s) 1419
BsaBI GATNNNNATC 2 cut(s) 1350, 1710
BsaI GGTCTC 1 cut(s) 1208
BsaWI WCCGGW 2 cut(s) 781, 811
Bsc4I CCNNNNNNNGG 1 cut(s) 419
Bse1I ACTGG 3 cut(s) 6, 1057, 1731
Bse3DI GCAATG 2 cut(s) 737, 842
Bse8I GATNNNNATC 2 cut(s) 1350, 1710
BseBI CCWGG 1 cut(s) 420
BseJI GATNNNNATC 2 cut(s) 1350, 1710
BseLI CCNNNNNNNGG 1 cut(s) 419
BseMI GCAATG 2 cut(s) 737, 842
BseNI ACTGG 3 cut(s) 6, 1057, 1731
BseRI GAGGAG 2 cut(s) 876, 1289
BseXI GCAGC 4 cut(s) 772, 799, 1253, 1492
BseYI CCCAGC 1 cut(s) 1069
BsgI GTGCAG 2 cut(s) 779, 806
Bsh1236I CGCG 1 cut(s) 1777
BshFI GGCC 1 cut(s) 5
BshNI GGYRCC 1 cut(s) 814
BsiHKAI GWGCWC 2 cut(s) 1465, 1819
BsiHKCI CYCGRG 1 cut(s) 1818
BsiSI CCGG 3 cut(s) 782, 812, 1600
BslFI GGGAC 1 cut(s) 816
BslI CCNNNNNNNGG 1 cut(s) 419
BsmAI GTCTC 3 cut(s) 1165, 1208, 1470
BsmFI GGGAC 1 cut(s) 816
BsmI GAATGC 1 cut(s) 1187
BsnI GGCC 1 cut(s) 5
Bso31I GGTCTC 1 cut(s) 1208
BsoBI CYCGRG 1 cut(s) 1818
Bsp1286I GDGCHC 2 cut(s) 1465, 1819
Bsp143I GATC 7 cut(s) 1252, 1345, 1408, 1564, 1618, 1660, 1711
BspANI GGCC 1 cut(s) 5
BspFNI CGCG 1 cut(s) 1777
BspLI GGNNCC 2 cut(s) 816, 1655
BspOI GCTAGC 1 cut(s) 200
BspPI GGATC 2 cut(s) 1403, 1706
BspT107I GGYRCC 1 cut(s) 814
BspTNI GGTCTC 1 cut(s) 1208
BsrBI CCGCTC 1 cut(s) 896
BsrDI GCAATG 2 cut(s) 737, 842
BsrI ACTGG 3 cut(s) 6, 1057, 1731
BssMI GATC 7 cut(s) 1252, 1345, 1408, 1564, 1618, 1660, 1711
Bst2UI CCWGG 1 cut(s) 420
Bst4CI ACNGT 5 cut(s) 945, 1141, 1490, 1658, 1856
BstAPI GCANNNNNTGC 2 cut(s) 1193, 1514
BstC8I GCNNGC 2 cut(s) 198, 1214
BstEII GGTNACC 1 cut(s) 1670
BstFNI CGCG 1 cut(s) 1777
BstKTI GATC 7 cut(s) 1255, 1348, 1411, 1567, 1621, 1663, 1714
BstMAI GTCTC 3 cut(s) 1165, 1208, 1470
BstMBI GATC 7 cut(s) 1252, 1345, 1408, 1564, 1618, 1660, 1711
BstMWI GCNNNNNNNGC 4 cut(s) 193, 223, 1193, 1514
BstNI CCWGG 1 cut(s) 420
BstPAI GACNNNNGTC 1 cut(s) 1419
BstPI GGTNACC 1 cut(s) 1670
BstSCI CCNGG 1 cut(s) 418
BstSFI CTRYAG 1 cut(s) 629
BstUI CGCG 1 cut(s) 1777
BstV1I GCAGC 4 cut(s) 772, 799, 1253, 1492
BstX2I RGATCY 1 cut(s) 1711
BstYI RGATCY 1 cut(s) 1711
BsuI GTATCC 1 cut(s) 57
BsuRI GGCC 1 cut(s) 5
BtgZI GCGATG 1 cut(s) 1118
BtrI CACGTC 1 cut(s) 1848
BtsI GCAGTG 2 cut(s) 227, 962
BtsIMutI CAGTG 5 cut(s) 227, 762, 962, 1064, 1137
Cac8I GCNNGC 2 cut(s) 198, 1214
Cfr13I GGNCC 2 cut(s) 422, 497
CseI GACGC 1 cut(s) 1766
Csp6I GTAC 1 cut(s) 1455
CspCI CAANNNNNGTGG 4 cut(s) 720, 755, 825, 860
CviAII CATG 3 cut(s) 87, 150, 1268
CviQI GTAC 1 cut(s) 1455
DpnI GATC 7 cut(s) 1254, 1347, 1410, 1566, 1620, 1662, 1713
DpnII GATC 7 cut(s) 1252, 1345, 1408, 1564, 1618, 1660, 1711
EaeI YGGCCR 1 cut(s) 3
Eco31I GGTCTC 1 cut(s) 1208
Eco47I GGWCC 2 cut(s) 422, 497
Eco57I CTGAAG 3 cut(s) 339, 738, 885
Eco88I CYCGRG 1 cut(s) 1818
Eco91I GGTNACC 1 cut(s) 1670
EcoO65I GGTNACC 1 cut(s) 1670
EcoRII CCWGG 1 cut(s) 418
FaeI CATG 3 cut(s) 90, 153, 1271
FaqI GGGAC 1 cut(s) 816
FatI CATG 3 cut(s) 86, 149, 1267
FauI CCCGC 2 cut(s) 33, 901
FbaI TGATCA 2 cut(s) 1345, 1660
FblI GTMKAC 1 cut(s) 1804
Fnu4HI GCNGC 9 cut(s) 188, 281, 545, 761, 788, 818, 1001, 1242, 1506
Fsp4HI GCNGC 9 cut(s) 188, 281, 545, 761, 788, 818, 1001, 1242, 1506
FspBI CTAG 4 cut(s) 197, 1425, 1458, 1614
GluI GCNGC 9 cut(s) 188, 281, 545, 761, 788, 818, 1001, 1242, 1506
GsaI CCCAGC 1 cut(s) 1073
HaeIII GGCC 1 cut(s) 5
HapII CCGG 3 cut(s) 782, 812, 1600
HgaI GACGC 1 cut(s) 1766
Hin1II CATG 3 cut(s) 90, 153, 1271
HincII GTYRAC 1 cut(s) 1805
HindII GTYRAC 1 cut(s) 1805
HinfI GANTC 8 cut(s) 1478, 1520, 1538, 1559, 1577, 1730, 1772, 1796
HpaII CCGG 3 cut(s) 782, 812, 1600
Hpy166II GTNNAC 7 cut(s) 773, 803, 863, 1118, 1291, 1436, 1805
Hpy188I TCNGA 8 cut(s) 1029, 1302, 1356, 1543, 1564, 1582, 1653, 1765
Hpy188III TCNNGA 4 cut(s) 495, 1412, 1715, 1784
Hpy8I GTNNAC 7 cut(s) 773, 803, 863, 1118, 1291, 1436, 1805
Hpy99I CGWCG 6 cut(s) 1452, 1455, 1599, 1782, 1785, 1809
HpyCH4III ACNGT 5 cut(s) 945, 1141, 1490, 1658, 1856
HpyCH4IV ACGT 5 cut(s) 1438, 1606, 1792, 1807, 1847
HpyCH4V TGCA 7 cut(s) 760, 787, 1187, 1196, 1216, 1271, 1508
HpyF10VI GCNNNNNNNGC 4 cut(s) 193, 223, 1193, 1514
HpySE526I ACGT 5 cut(s) 1438, 1606, 1792, 1807, 1847
Hsp92II CATG 3 cut(s) 90, 153, 1271
Ksp22I TGATCA 2 cut(s) 1345, 1660
Kzo9I GATC 7 cut(s) 1252, 1345, 1408, 1564, 1618, 1660, 1711
LmnI GCTCC 2 cut(s) 901, 1276
Lsp1109I GCAGC 4 cut(s) 772, 799, 1253, 1492
LweI GCATC 1 cut(s) 1314
MaeI CTAG 4 cut(s) 197, 1425, 1458, 1614
MaeII ACGT 5 cut(s) 1438, 1606, 1792, 1807, 1847
MaeIII GTNAC 8 cut(s) 89, 152, 939, 945, 1379, 1490, 1670, 1687
MalI GATC 7 cut(s) 1254, 1347, 1410, 1566, 1620, 1662, 1713
MbiI CCGCTC 1 cut(s) 896
MboI GATC 7 cut(s) 1252, 1345, 1408, 1564, 1618, 1660, 1711
MboII GAAGA 8 cut(s) 549, 1234, 1237, 1412, 1556, 1568, 1721, 1751
MfeI CAATTG 4 cut(s) 1095, 1197, 1509, 1692
MflI RGATCY 1 cut(s) 1711
MhlI GDGCHC 2 cut(s) 1465, 1819
MlsI TGGCCA 1 cut(s) 5
MluCI AATT 8 cut(s) 1050, 1090, 1095, 1197, 1500, 1509, 1532, 1692
MluNI TGGCCA 1 cut(s) 5
MlyI GAGTC 3 cut(s) 1472, 1532, 1805
MmeI TCCRAC 2 cut(s) 191, 1875
Mox20I TGGCCA 1 cut(s) 5
MscI TGGCCA 1 cut(s) 5
MseI TTAA 2 cut(s) 857, 870
MslI CAYNNNNRTG 3 cut(s) 85, 148, 1668
Msp20I TGGCCA 1 cut(s) 5
MspI CCGG 3 cut(s) 782, 812, 1600
MspR9I CCNGG 1 cut(s) 420
MunI CAATTG 4 cut(s) 1095, 1197, 1509, 1692
Mva1269I GAATGC 1 cut(s) 1187
MvaI CCWGG 1 cut(s) 420
MvnI CGCG 1 cut(s) 1777
MwoI GCNNNNNNNGC 4 cut(s) 193, 223, 1193, 1514
NdeII GATC 7 cut(s) 1252, 1345, 1408, 1564, 1618, 1660, 1711
NheI GCTAGC 1 cut(s) 196
NlaIII CATG 3 cut(s) 90, 153, 1271
NlaIV GGNNCC 2 cut(s) 816, 1655
NmuCI GTSAC 6 cut(s) 939, 945, 1379, 1490, 1670, 1687
PaeR7I CTCGAG 1 cut(s) 1818
PcsI WCGNNNNNNNCGW 4 cut(s) 1444, 1603, 1789, 1810
PctI GAATGC 1 cut(s) 1187
PfeI GAWTC 5 cut(s) 1520, 1559, 1577, 1730, 1772
PflFI GACNNNGTC 1 cut(s) 1809
PkrI GCNGC 9 cut(s) 189, 282, 546, 762, 789, 819, 1002, 1243, 1507
PleI GAGTC 3 cut(s) 1472, 1532, 1804
PpsI GAGTC 3 cut(s) 1472, 1532, 1804
PshAI GACNNNNGTC 1 cut(s) 1419
PsiI TTATAA 1 cut(s) 1089
Psp6I CCWGG 1 cut(s) 418
PspEI GGTNACC 1 cut(s) 1670
PspFI CCCAGC 1 cut(s) 1069
PspGI CCWGG 1 cut(s) 418
PspN4I GGNNCC 2 cut(s) 816, 1655
PspPI GGNCC 2 cut(s) 422, 497
PspXI VCTCGAGB 1 cut(s) 1818
PsuI RGATCY 1 cut(s) 1711
PsyI GACNNNGTC 1 cut(s) 1809
RsaI GTAC 1 cut(s) 1456
RsaNI GTAC 1 cut(s) 1455
RseI CAYNNNNRTG 3 cut(s) 85, 148, 1668
SalI GTCGAC 1 cut(s) 1803
SaqAI TTAA 2 cut(s) 857, 870
SatI GCNGC 9 cut(s) 188, 281, 545, 761, 788, 818, 1001, 1242, 1506
Sau3AI GATC 7 cut(s) 1252, 1345, 1408, 1564, 1618, 1660, 1711
Sau96I GGNCC 2 cut(s) 422, 497
SchI GAGTC 3 cut(s) 1472, 1532, 1805
ScrFI CCNGG 1 cut(s) 420
SduI GDGCHC 2 cut(s) 1465, 1819
SfaNI GCATC 1 cut(s) 1314
SfcI CTRYAG 1 cut(s) 629
Sfr274I CTCGAG 1 cut(s) 1818
SinI GGWCC 2 cut(s) 422, 497
SlaI CTCGAG 1 cut(s) 1818
SmiMI CAYNNNNRTG 3 cut(s) 85, 148, 1668
SmlI CTYRAG 1 cut(s) 1818
SmoI CTYRAG 1 cut(s) 1818
Sse9I AATT 8 cut(s) 1050, 1090, 1095, 1197, 1500, 1509, 1532, 1692
SspMI CTAG 4 cut(s) 197, 1425, 1458, 1614
StyD4I CCNGG 1 cut(s) 418
TaaI ACNGT 5 cut(s) 945, 1141, 1490, 1658, 1856
TaiI ACGT 5 cut(s) 1441, 1609, 1795, 1810, 1850
TaqI TCGA 2 cut(s) 1804, 1819
TasI AATT 8 cut(s) 1050, 1090, 1095, 1197, 1500, 1509, 1532, 1692
TauI GCSGC 5 cut(s) 190, 283, 547, 820, 1003
TfiI GAWTC 5 cut(s) 1520, 1559, 1577, 1730, 1772
Tru1I TTAA 2 cut(s) 857, 870
Tru9I TTAA 2 cut(s) 857, 870
TscAI CASTG 5 cut(s) 234, 762, 969, 1064, 1144
TseFI GTSAC 6 cut(s) 939, 945, 1379, 1490, 1670, 1687
TseI GCWGC 4 cut(s) 760, 787, 1241, 1505
Tsp45I GTSAC 6 cut(s) 939, 945, 1379, 1490, 1670, 1687
TspDTI ATGAA 7 cut(s) 30, 234, 726, 831, 1569, 1722, 1869
TspGWI ACGGA 1 cut(s) 1263
TspRI CASTG 5 cut(s) 234, 762, 969, 1064, 1144
Tth111I GACNNNGTC 1 cut(s) 1809
VpaK11BI GGWCC 2 cut(s) 422, 497
XhoI CTCGAG 1 cut(s) 1818
XmiI GTMKAC 1 cut(s) 1804
XspI CTAG 4 cut(s) 197, 1425, 1458, 1614
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.