Rmu_sc0001339.1_g000015

proline-rich receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001339.1
Physical Location & Seq
Reverse (-)
74475 .. 76400
1926 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001339.1_g000015.1.cds

Sequence Viewer

Length: 1926 bp
atggccagttatccatactattccccgccaccaccaccttcatcgtatccttactactcaccaccaccaccaccaccttcaccaccatgtaacgaaactactacaacactcccacctccacccccaccaccaccctcaccaccatgtaacgacactactcgaactatatcaccacctttgccgcctccgctagcaccaccaccaccaccgccacaaatgccactgccaccaccaccttcatcttactactccccaccacaaccttcaccaccgccgccaccaccacctccatcatactactccccaccactactttcaccaccaccaccatcacccccaccaccaacttcagttccaccacctccaccttcaataccaccgcccatatatccaccacataaacatccaccaccaccttcacaaccaccatcaccaccaccatcaccttcaccatcaggaccaccacctacactaccgccaccctcacacccaccccataaacatccaccacacaaactgccgccaccaccttcttcaccaccaccaccgccatcatcacatcccacaccttcaccatcatcaccaccacctaaaacacctacactaccgccaccatctcatccatcaccttcaatatcgccaccattacatccaccaccttcaccgtcacctttaccgcctactatgttgccaccttcacacccaccaccttcattgccacctccaccttcagtgcagccaccaagtccaccaccttcacctttaccacccgcactaaccccgcctgcagtgccgccaccatcaagtccaccacctccggtgcagccaccatcaagtccaccacctccggtgccgccaccagcaagtcccccaccttcattgccaccgccattaagtccaccacttacaccattaccacctcctcatcccgctccttcagttccaccaccatcacatccaccactttcaccattgtcaccgtcaccatcaccacctacactgccaccatcatacacaccaccaccttctctgttgccgccatcatcctcacccaagtttcctccgatactcaccccagagccaccaatttgccagtgtgtatgcccagcaccaagtccttattataattcaattgccccatcaccgcaaagttcaccatctcatagccatcgcactgtttatcttgccacttttgtctctcttggtggattgttctttcttgcattccttgcaattggtctcttttgcttgcataagaagaagaaaaagtcaagggcagcatacggagatcaaggtgtttctcatgcagagaagcaaggagaagttcacacctttcagagcatccccacagctaaccaaagtgtagctgtcaatatagatgatcaaaatccgaatgttgaaccgaaatcttatggtgacggcggtgaggaaggagaagaaaatgatcctgacagaagtcctagtcgtcgtaaacgtcctattcgtcgtcgtactagaggacaacgaaaaagagagtccaatcatggtgacaacataattgctgcaattggcgccgattcaaatgaggaattagactccgaagatgatgatgaagaatcagatcaacctaaagattcagataaaagttctcgtcgccggaaacgtggttctagtggtcgcacccaaaaaagagagcctaaaacaaatcggaaccgtgatcataatggtgaccaaagtgtatctgtcacaattgatgatgatgatgatgatgaagatccagatgtggaactggaatcgcaagaagatgacaataaatcaagtggttcagataaagattcgcgtcgtcgtgataaacgtgagtctggtcgacgtagtcgtacgggaggaagcaaacacaaagagccttccacgtccaaccgtgataccgatgaccgcaaaacttcataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

641

Amino Acids

67.97

Weight (kDa)

7.05

Isoelectric Point (pI)

124.55

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000458)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G34320 AT1G34320
fragaria_vesca FvH4_2g12340 FvH4_2g12350 FvH4_2g12350 FvH4_2g12350 FvH4_2g12350 FvH4_5g36070 FvH4_5g36100 FvH4_5g36130 FvH4_5g36140
malus_domestica MD05G1039900.v1.1 MD10G1045400.v1.1 MD10G1045600.v1.1 MD10G1045700.v1.1 MD10G1045800.v1.1 MD12G1057900.v1.1
prunus_persica Prupe.1G525500_v2.0.a1 Prupe.8G052300_v2.0.a1 Prupe.8G052300_v2.0.a1 Prupe.8G052300_v2.0.a1 Prupe.8G052300_v2.0.a1 Prupe.8G052300_v2.0.a1 Prupe.8G052300_v2.0.a1 Prupe.8G052600_v2.0.a1 Prupe.8G052600_v2.0.a1 Prupe.8G052600_v2.0.a1 Prupe.8G052600_v2.0.a1 Prupe.8G052600_v2.0.a1 Prupe.8G052600_v2.0.a1 Prupe.8G052600_v2.0.a1
pyrus_communis pycom05g03250 pycom10g03180 pycom10g03190 pycom15g33960
rosa_chinensis RchiOBHm_Chr3g0484671 RchiOBHm_Chr6g0272351 RchiOBHm_Chr6g0272361 RchiOBHm_Chr7g0237881
rosa_laevigata RLG00000000952 RLG00000000960 RLG00000001025 RLG00000008689 RLG00000010609 RLG00000013679 RLG00000013680
rosa_multiflora Rmu_sc0001339.1_g000015 Rmu_sc0002877.1_g000020 Rmu_sc0009379.1_g000003 Rmu_ssc0000199.1_g000001 Rmu_ssc0000321.1_g000001
rosa_roxburghii Rroxscaffold_1G00039160 Rroxscaffold_3G00223500 Rroxscaffold_3G00223670 Rroxscaffold_7G00196370 Rroxscaffold_7G00196380
rosa_rugosa Rorug06G0068200 Rorug06G0068300 Rorug06G0068400 Rorug07G0302100 Rorug07G0308600 Rorug07G0309200.1
rosa_samantha Rh3AG263300 Rh3DG292000 Rh6AG113700 Rh6AG184400 Rh6AG184500 Rh6BG187800 Rh6BG187900 Rh6CG185900 Rh6DG177600 Rh6DG177700 Rh7AG458500 Rh7AG464200 Rh7AG464500 Rh7BG429200 Rh7BG434200 Rh7CG476400 Rh7CG481600 Rh7CG482700 Rh7DG445700 Rh7DG450300 Rh7DG451400
rosa_wichuraiana Rw0G019450 Rw6G015900 Rw6G015910 Rw6G015940 Rw6G015950 Rw7G037980 Rw7G038410 Rw7G038470

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1125
AccB1I GGYRCC 2 cut(s) 850, 1550
AccBSI CCGCTC 1 cut(s) 932
AccI GTMKAC 1 cut(s) 1846
AccII CGCG 1 cut(s) 1819
AclWI GGATC 2 cut(s) 1439, 1748
AcoI YGGCCR 1 cut(s) 3
AcuI CTGAAG 3 cut(s) 333, 714, 921
AcyI GRCGYC 1 cut(s) 1551
AfaI GTAC 2 cut(s) 1492, 1858
AgsI TTSAA 5 cut(s) 372, 633, 1131, 1400, 1560
AjiI CACGTC 1 cut(s) 1890
AloI GAACNNNNNNTCC 2 cut(s) 1630, 1662
AluBI AGCT 2 cut(s) 1352, 1367
AluI AGCT 2 cut(s) 1352, 1367
Alw26I GTCTC 2 cut(s) 1201, 1244
AlwI GGATC 2 cut(s) 1439, 1748
AoxI GGCC 1 cut(s) 3
ApeKI GCWGC 4 cut(s) 736, 823, 1277, 1541
AspLEI GCGC 1 cut(s) 1553
AspS9I GGNCC 1 cut(s) 458
AsuNHI GCTAGC 1 cut(s) 190
AvaII GGWCC 1 cut(s) 458
BalI TGGCCA 1 cut(s) 5
BanI GGYRCC 2 cut(s) 850, 1550
BbvI GCAGC 4 cut(s) 748, 835, 1289, 1528
BceAI ACGGC 1 cut(s) 1435
BciVI GTATCC 1 cut(s) 57
BclI TGATCA 2 cut(s) 1381, 1696
BcoDI GTCTC 2 cut(s) 1201, 1244
BfaI CTAG 4 cut(s) 191, 1461, 1494, 1650
BfmI CTRYAG 1 cut(s) 786
BfoI RGCGCY 1 cut(s) 1554
BfuI GTATCC 1 cut(s) 57
Bme18I GGWCC 1 cut(s) 458
BmgBI CACGTC 1 cut(s) 1890
BmgT120I GGNCC 1 cut(s) 458
BmiI GGNNCC 3 cut(s) 852, 1552, 1691
BmsI GCATC 1 cut(s) 1350
BmtI GCTAGC 1 cut(s) 194
BoxI GACNNNNGTC 1 cut(s) 1455
BsaBI GATNNNNATC 2 cut(s) 1386, 1752
BsaHI GRCGYC 1 cut(s) 1551
BsaI GGTCTC 1 cut(s) 1244
BsaWI WCCGGW 2 cut(s) 817, 847
Bse1I ACTGG 3 cut(s) 6, 1093, 1773
Bse3DI GCAATG 2 cut(s) 713, 878
Bse8I GATNNNNATC 2 cut(s) 1386, 1752
BseGI GGATG 9 cut(s) 403, 502, 559, 619, 649, 925, 955, 1043, 1341
BseJI GATNNNNATC 2 cut(s) 1386, 1752
BseMI GCAATG 2 cut(s) 713, 878
BseNI ACTGG 3 cut(s) 6, 1093, 1773
BseRI GAGGAG 1 cut(s) 912
BseXI GCAGC 4 cut(s) 748, 835, 1289, 1528
BseYI CCCAGC 1 cut(s) 1105
BsgI GTGCAG 2 cut(s) 755, 842
Bsh1236I CGCG 1 cut(s) 1819
BshFI GGCC 1 cut(s) 5
BshNI GGYRCC 2 cut(s) 850, 1550
BsiSI CCGG 3 cut(s) 818, 848, 1636
BsiWI CGTACG 1 cut(s) 1856
BslFI GGGAC 1 cut(s) 852
BsmAI GTCTC 2 cut(s) 1201, 1244
BsmFI GGGAC 1 cut(s) 852
BsmI GAATGC 1 cut(s) 1223
BsnI GGCC 1 cut(s) 5
Bso31I GGTCTC 1 cut(s) 1244
Bsp143I GATC 6 cut(s) 1288, 1381, 1444, 1600, 1696, 1753
BspANI GGCC 1 cut(s) 5
BspFNI CGCG 1 cut(s) 1819
BspLI GGNNCC 3 cut(s) 852, 1552, 1691
BspMAI CTGCAG 1 cut(s) 790
BspOI GCTAGC 1 cut(s) 194
BspPI GGATC 2 cut(s) 1439, 1748
BspT107I GGYRCC 2 cut(s) 850, 1550
BspTNI GGTCTC 1 cut(s) 1244
BsrBI CCGCTC 1 cut(s) 932
BsrDI GCAATG 2 cut(s) 713, 878
BsrI ACTGG 3 cut(s) 6, 1093, 1773
BssMI GATC 6 cut(s) 1288, 1381, 1444, 1600, 1696, 1753
BssNI GRCGYC 1 cut(s) 1551
Bst4CI ACNGT 5 cut(s) 666, 981, 1177, 1694, 1898
BstACI GRCGYC 1 cut(s) 1551
BstAPI GCANNNNNTGC 1 cut(s) 1229
BstC8I GCNNGC 3 cut(s) 192, 786, 1250
BstEII GGTNACC 1 cut(s) 1706
BstF5I GGATG 9 cut(s) 403, 502, 559, 619, 649, 925, 955, 1043, 1341
BstFNI CGCG 1 cut(s) 1819
BstH2I RGCGCY 1 cut(s) 1554
BstHHI GCGC 1 cut(s) 1553
BstKTI GATC 6 cut(s) 1291, 1384, 1447, 1603, 1699, 1756
BstMAI GTCTC 2 cut(s) 1201, 1244
BstMBI GATC 6 cut(s) 1288, 1381, 1444, 1600, 1696, 1753
BstMWI GCNNNNNNNGC 5 cut(s) 187, 217, 790, 1229, 1550
BstPAI GACNNNNGTC 1 cut(s) 1455
BstPI GGTNACC 1 cut(s) 1706
BstSFI CTRYAG 1 cut(s) 786
BstUI CGCG 1 cut(s) 1819
BstV1I GCAGC 4 cut(s) 748, 835, 1289, 1528
BstX2I RGATCY 1 cut(s) 1753
BstYI RGATCY 1 cut(s) 1753
BsuI GTATCC 1 cut(s) 57
BsuRI GGCC 1 cut(s) 5
BtgZI GCGATG 1 cut(s) 1154
BtrI CACGTC 1 cut(s) 1890
BtsCI GGATG 9 cut(s) 403, 502, 559, 619, 649, 925, 955, 1043, 1341
BtsI GCAGTG 3 cut(s) 221, 795, 998
BtsIMutI CAGTG 6 cut(s) 221, 738, 795, 998, 1100, 1173
Cac8I GCNNGC 3 cut(s) 192, 786, 1250
CfoI GCGC 1 cut(s) 1553
Cfr13I GGNCC 1 cut(s) 458
CseI GACGC 1 cut(s) 1808
Csp6I GTAC 2 cut(s) 1491, 1857
CspCI CAANNNNNGTGG 4 cut(s) 696, 731, 861, 896
CviAII CATG 4 cut(s) 87, 144, 1304, 1523
CviJI RGCY 9 cut(s) 5, 739, 826, 1081, 1167, 1352, 1367, 1675, 1882
CviKI_1 RGCY 9 cut(s) 5, 739, 826, 1081, 1167, 1352, 1367, 1675, 1882
CviQI GTAC 2 cut(s) 1491, 1857
DinI GGCGCC 1 cut(s) 1552
DpnI GATC 6 cut(s) 1290, 1383, 1446, 1602, 1698, 1755
DpnII GATC 6 cut(s) 1288, 1381, 1444, 1600, 1696, 1753
EaeI YGGCCR 1 cut(s) 3
Eco31I GGTCTC 1 cut(s) 1244
Eco47I GGWCC 1 cut(s) 458
Eco57I CTGAAG 3 cut(s) 333, 714, 921
Eco91I GGTNACC 1 cut(s) 1706
EcoO65I GGTNACC 1 cut(s) 1706
EgeI GGCGCC 1 cut(s) 1552
EheI GGCGCC 1 cut(s) 1552
FaeI CATG 4 cut(s) 90, 147, 1307, 1526
FaqI GGGAC 1 cut(s) 852
FatI CATG 4 cut(s) 86, 143, 1303, 1522
FauI CCCGC 4 cut(s) 33, 778, 789, 937
FbaI TGATCA 2 cut(s) 1381, 1696
FblI GTMKAC 1 cut(s) 1846
FokI GGATG 9 cut(s) 390, 489, 546, 606, 636, 912, 942, 1030, 1328
FspBI CTAG 4 cut(s) 191, 1461, 1494, 1650
GlaI GCGC 1 cut(s) 1552
GsaI CCCAGC 1 cut(s) 1109
HaeII RGCGCY 1 cut(s) 1554
HaeIII GGCC 1 cut(s) 5
HapII CCGG 3 cut(s) 818, 848, 1636
HgaI GACGC 1 cut(s) 1808
HhaI GCGC 1 cut(s) 1553
Hin1I GRCGYC 1 cut(s) 1551
Hin1II CATG 4 cut(s) 90, 147, 1307, 1526
Hin6I GCGC 1 cut(s) 1551
HinP1I GCGC 1 cut(s) 1551
HincII GTYRAC 1 cut(s) 1847
HindII GTYRAC 1 cut(s) 1847
HinfI GANTC 8 cut(s) 1514, 1556, 1574, 1595, 1613, 1772, 1814, 1838
HpaII CCGG 3 cut(s) 818, 848, 1636
Hpy166II GTNNAC 8 cut(s) 749, 809, 839, 899, 1154, 1327, 1472, 1847
Hpy188I TCNGA 8 cut(s) 1065, 1338, 1392, 1579, 1600, 1618, 1689, 1807
Hpy188III TCNNGA 4 cut(s) 456, 1448, 1757, 1826
Hpy8I GTNNAC 8 cut(s) 749, 809, 839, 899, 1154, 1327, 1472, 1847
Hpy99I CGWCG 7 cut(s) 1470, 1488, 1491, 1635, 1824, 1827, 1851
HpyCH4III ACNGT 5 cut(s) 666, 981, 1177, 1694, 1898
HpyCH4IV ACGT 5 cut(s) 1474, 1642, 1834, 1849, 1889
HpyCH4V TGCA 8 cut(s) 736, 788, 823, 1223, 1232, 1252, 1307, 1544
HpyF10VI GCNNNNNNNGC 5 cut(s) 187, 217, 790, 1229, 1550
HpySE526I ACGT 5 cut(s) 1474, 1642, 1834, 1849, 1889
Hsp92I GRCGYC 1 cut(s) 1551
Hsp92II CATG 4 cut(s) 90, 147, 1307, 1526
HspAI GCGC 1 cut(s) 1551
KasI GGCGCC 1 cut(s) 1550
Ksp22I TGATCA 2 cut(s) 1381, 1696
Kzo9I GATC 6 cut(s) 1288, 1381, 1444, 1600, 1696, 1753
LmnI GCTCC 1 cut(s) 937
Lsp1109I GCAGC 4 cut(s) 748, 835, 1289, 1528
LweI GCATC 1 cut(s) 1350
MaeI CTAG 4 cut(s) 191, 1461, 1494, 1650
MaeII ACGT 5 cut(s) 1474, 1642, 1834, 1849, 1889
MaeIII GTNAC 9 cut(s) 89, 146, 666, 975, 981, 1415, 1526, 1706, 1723
MalI GATC 6 cut(s) 1290, 1383, 1446, 1602, 1698, 1755
MbiI CCGCTC 1 cut(s) 932
MboI GATC 6 cut(s) 1288, 1381, 1444, 1600, 1696, 1753
MboII GAAGA 8 cut(s) 525, 1270, 1273, 1448, 1592, 1604, 1763, 1793
MfeI CAATTG 4 cut(s) 1131, 1233, 1545, 1728
MflI RGATCY 1 cut(s) 1753
MlsI TGGCCA 1 cut(s) 5
MluCI AATT 8 cut(s) 1086, 1126, 1131, 1233, 1536, 1545, 1568, 1728
MluNI TGGCCA 1 cut(s) 5
Mly113I GGCGCC 1 cut(s) 1551
MlyI GAGTC 3 cut(s) 1523, 1568, 1847
MmeI TCCRAC 1 cut(s) 1917
Mox20I TGGCCA 1 cut(s) 5
MscI TGGCCA 1 cut(s) 5
MseI TTAA 1 cut(s) 893
MslI CAYNNNNRTG 3 cut(s) 85, 142, 1704
Msp20I TGGCCA 1 cut(s) 5
MspI CCGG 3 cut(s) 818, 848, 1636
MunI CAATTG 4 cut(s) 1131, 1233, 1545, 1728
Mva1269I GAATGC 1 cut(s) 1223
MvnI CGCG 1 cut(s) 1819
MwoI GCNNNNNNNGC 5 cut(s) 187, 217, 790, 1229, 1550
NarI GGCGCC 1 cut(s) 1551
NdeII GATC 6 cut(s) 1288, 1381, 1444, 1600, 1696, 1753
NheI GCTAGC 1 cut(s) 190
NlaIII CATG 4 cut(s) 90, 147, 1307, 1526
NlaIV GGNNCC 3 cut(s) 852, 1552, 1691
NmuCI GTSAC 7 cut(s) 666, 975, 981, 1415, 1526, 1706, 1723
PcsI WCGNNNNNNNCGW 5 cut(s) 1471, 1480, 1639, 1831, 1852
PctI GAATGC 1 cut(s) 1223
PfeI GAWTC 5 cut(s) 1556, 1595, 1613, 1772, 1814
Pfl23II CGTACG 1 cut(s) 1856
PflFI GACNNNGTC 1 cut(s) 1851
PleI GAGTC 3 cut(s) 1522, 1568, 1846
PluTI GGCGCC 1 cut(s) 1554
PpsI GAGTC 3 cut(s) 1522, 1568, 1846
PshAI GACNNNNGTC 1 cut(s) 1455
PsiI TTATAA 1 cut(s) 1125
PspEI GGTNACC 1 cut(s) 1706
PspFI CCCAGC 1 cut(s) 1105
PspLI CGTACG 1 cut(s) 1856
PspN4I GGNNCC 3 cut(s) 852, 1552, 1691
PspPI GGNCC 1 cut(s) 458
PstI CTGCAG 1 cut(s) 790
PsuI RGATCY 1 cut(s) 1753
PsyI GACNNNGTC 1 cut(s) 1851
RsaI GTAC 2 cut(s) 1492, 1858
RsaNI GTAC 2 cut(s) 1491, 1857
RseI CAYNNNNRTG 3 cut(s) 85, 142, 1704
SalI GTCGAC 1 cut(s) 1845
SaqAI TTAA 1 cut(s) 893
Sau3AI GATC 6 cut(s) 1288, 1381, 1444, 1600, 1696, 1753
Sau96I GGNCC 1 cut(s) 458
SchI GAGTC 3 cut(s) 1523, 1568, 1847
SfaNI GCATC 1 cut(s) 1350
SfcI CTRYAG 1 cut(s) 786
SfoI GGCGCC 1 cut(s) 1552
SinI GGWCC 1 cut(s) 458
SmiMI CAYNNNNRTG 3 cut(s) 85, 142, 1704
Sse9I AATT 8 cut(s) 1086, 1126, 1131, 1233, 1536, 1545, 1568, 1728
SspDI GGCGCC 1 cut(s) 1550
SspMI CTAG 4 cut(s) 191, 1461, 1494, 1650
TaaI ACNGT 5 cut(s) 666, 981, 1177, 1694, 1898
TaiI ACGT 5 cut(s) 1477, 1645, 1837, 1852, 1892
TaqI TCGA 2 cut(s) 160, 1846
TasI AATT 8 cut(s) 1086, 1126, 1131, 1233, 1536, 1545, 1568, 1728
TauI GCSGC 6 cut(s) 184, 277, 523, 796, 856, 1039
TfiI GAWTC 5 cut(s) 1556, 1595, 1613, 1772, 1814
Tru1I TTAA 1 cut(s) 893
Tru9I TTAA 1 cut(s) 893
TscAI CASTG 6 cut(s) 228, 738, 795, 1005, 1100, 1180
TseFI GTSAC 7 cut(s) 666, 975, 981, 1415, 1526, 1706, 1723
TseI GCWGC 4 cut(s) 736, 823, 1277, 1541
Tsp45I GTSAC 7 cut(s) 666, 975, 981, 1415, 1526, 1706, 1723
TspDTI ATGAA 7 cut(s) 30, 228, 702, 867, 1605, 1764, 1911
TspGWI ACGGA 1 cut(s) 1299
TspRI CASTG 6 cut(s) 228, 738, 795, 1005, 1100, 1180
Tth111I GACNNNGTC 1 cut(s) 1851
VpaK11BI GGWCC 1 cut(s) 458
XmiI GTMKAC 1 cut(s) 1846
XspI CTAG 4 cut(s) 191, 1461, 1494, 1650
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.