RLG00000013680

Domain of unknown function (DUF3475)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
OG0000458
Physical Location & Seq
Forward (+)
35736140 .. 35747070
10931 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000013680

Sequence Viewer

Length: 1713 bp
ATGGGAATTCGCAACAAGGTCAAACGGGCACCCAAAGTAGAAGATGTCACTGTAGCTATAACTCCATCATTCATGAGTGATGGGTGTGATGAACTGCCCCCAAGAGCGAAAGGTATTACAACTCCATCCAATTGCTTCTCTAAGCAGGCAGCTGTTGCTAAGGTTTCAGCAGTAAGCTCTCTTTTGGGTAGAGCTAGCTCGATTGGATTTGGGAAGGCAATGGAAATTTTGGACAGTTTTGGCAGCAGCATCACAAATTGGGACCCCACTTTAAATTCTGAGGTGCAAATAAAAGGGAATACAATTTCAATTTTGGCTTTTGAAGTTGCAAACGCAGTTGTCAAGGGTGCGAAGCTAATGCAGTCCCTTTCAGAAGATGAGATCAGATATTTAAAAGACGTGCTCCTACCATCCAAAGGGGTGCAAAGTTTAATATCTACAGATATGGATGAGCTCCTCAGAATTGCCGCTGCTGACAAGAGAGAAGAGTTGAGAACTTTTTTGAGAGATGTTATACGTTTTGGAAATCGTACTTGTGATCCGACATGGCACAACTTGGATCGCTATTTTAGGAAGATTGGCTTGAAAGTTACTGAACAAACTCATTTAAAGAAGCAAGCAGAGAGAGGGATGGAACATTTGATAACTCTAGTTCAGTCAACAGCAGAACTATGTCATGTGTTGCATTCGTTGGATAGATTGGAACAAGAATATCGGCGTAAGCTTGAAGAAGATAGTTCAGTTACTGCTAGAAGAGGAGACAACCTTGCAATTTTAAACGCAGATATAAAGAATCAAATGAAGCTTGTAAACAGCTTAAAGAAAAAATCTCTGTGGTCAATGACTTTTGAAGAGGTTATGCCGAAGCTTGTAGACATTGTGCAATTATTACACATAAAAATTCATGAAGCTTTTGGAAGTACTGATGATGACGAACCAGTGGAACGTTCTCAGAGGAACTGTAAAAGGTTGGGGCCTGCTGGTACTTCATTACACTATGCGCATATTATTACACAAATTAACACACTTGTGTCTCGATCAAGGTCAGTGCCTCCAAGTTTGATAGATACTCTGTATGGGGCACTACCATGCAGTGTAAAGTCAACTCTGCGCTTAAAATTTCAGTTAGTTGAGCTCACCATTCCTCAAATCAATGCTGAAATGAAGCAAACTTTGGATTGGCTTGTTCCCATCGCCATTAACACAACCAAGGCTCTTCATGGCTTTGGATGGGTTGGAGAGTGGGCAAATACAGGGTTTGAGGCATGCTGGCATGCTGGCTTGACTAGCATTCCGAGGATTGGGACTCTACACCATGCCGATGAGAAAAAAACTGATGCTTATATATGTGAACTAGTAGTCTTGCTACATTATGTGATCAGCCAGGTGGGGGTTGGCCATCGTGGAATGCCATCGTCACCTGTTGAAACCTGCATCCAGAGGACGAATGAGTTGACAGCTGAAGATCAAGAGCTGCTTCAGGATGTGGGTACAAACAGCATCAGACCAGGAATGAGTAAAAGTCAGAATTTTGACGCAGGAAAGGCCAGCAGGTTGAGCAGACGCCATAGGCTGAGTAAGAGTAGCAGAGACTTCCTAGCAAAAGATAAACTTCCCATTGCGAATCTGTTGTCTAGGCCCATAGACTCTGATATAACCTGGACCAAGTTCTTGGATGCCATTGATGGAGTTGACACAATGCCCAGGGTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03013 ko03015 ko03040 ko05164 map03013 map03015 map03040 map05164
Pfam Domains
Protein Families
DUF3475 DUF668

Protein Analysis

571

Amino Acids

63.54

Weight (kDa)

8.69

Isoelectric Point (pI)

42.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF3475 PF11961 104 - 160 1.3e-22 Domain of unknown function (DUF3475)
DUF668 PF05003 323 - 404 3.4e-20 Protein of unknown function (DUF668)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000458)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G34320 AT1G34320
fragaria_vesca FvH4_2g12340 FvH4_2g12350 FvH4_2g12350 FvH4_2g12350 FvH4_2g12350 FvH4_5g36070 FvH4_5g36100 FvH4_5g36130 FvH4_5g36140
malus_domestica MD05G1039900.v1.1 MD10G1045400.v1.1 MD10G1045600.v1.1 MD10G1045700.v1.1 MD10G1045800.v1.1 MD12G1057900.v1.1
prunus_persica Prupe.1G525500_v2.0.a1 Prupe.8G052300_v2.0.a1 Prupe.8G052300_v2.0.a1 Prupe.8G052300_v2.0.a1 Prupe.8G052300_v2.0.a1 Prupe.8G052300_v2.0.a1 Prupe.8G052300_v2.0.a1 Prupe.8G052600_v2.0.a1 Prupe.8G052600_v2.0.a1 Prupe.8G052600_v2.0.a1 Prupe.8G052600_v2.0.a1 Prupe.8G052600_v2.0.a1 Prupe.8G052600_v2.0.a1 Prupe.8G052600_v2.0.a1
pyrus_communis pycom05g03250 pycom10g03180 pycom10g03190 pycom15g33960
rosa_chinensis RchiOBHm_Chr3g0484671 RchiOBHm_Chr6g0272351 RchiOBHm_Chr6g0272361 RchiOBHm_Chr7g0237881
rosa_laevigata RLG00000000952 RLG00000000960 RLG00000001025 RLG00000008689 RLG00000010609 RLG00000013679 RLG00000013680
rosa_multiflora Rmu_sc0001339.1_g000015 Rmu_sc0002877.1_g000020 Rmu_sc0009379.1_g000003 Rmu_ssc0000199.1_g000001 Rmu_ssc0000321.1_g000001
rosa_roxburghii Rroxscaffold_1G00039160 Rroxscaffold_3G00223500 Rroxscaffold_3G00223670 Rroxscaffold_7G00196370 Rroxscaffold_7G00196380
rosa_rugosa Rorug06G0068200 Rorug06G0068300 Rorug06G0068400 Rorug07G0302100 Rorug07G0308600 Rorug07G0309200.1
rosa_samantha Rh3AG263300 Rh3DG292000 Rh6AG113700 Rh6AG184400 Rh6AG184500 Rh6BG187800 Rh6BG187900 Rh6CG185900 Rh6DG177600 Rh6DG177700 Rh7AG458500 Rh7AG464200 Rh7AG464500 Rh7BG429200 Rh7BG434200 Rh7CG476400 Rh7CG481600 Rh7CG482700 Rh7DG445700 Rh7DG450300 Rh7DG451400
rosa_wichuraiana Rw0G019450 Rw6G015900 Rw6G015910 Rw6G015940 Rw6G015950 Rw7G037980 Rw7G038410 Rw7G038470

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1002
Acc36I ACCTGC 2 cut(s) 1439, 1542
AccB1I GGYRCC 1 cut(s) 28
AccI GTMKAC 1 cut(s) 873
AciI CCGC 1 cut(s) 468
AclI AACGTT 1 cut(s) 946
AclWI GGATC 2 cut(s) 533, 567
AcoI YGGCCR 1 cut(s) 1396
AcsI RAATTY 6 cut(s) 6, 225, 274, 900, 1118, 1528
AcuI CTGAAG 2 cut(s) 1463, 1482
AcyI GRCGYC 1 cut(s) 1564
AfaI GTAC 4 cut(s) 532, 922, 985, 1492
AfiI CCNNNNNNNGG 3 cut(s) 416, 1301, 1390
AgsI TTSAA 6 cut(s) 309, 323, 586, 728, 851, 1427
AhlI ACTAGT 1 cut(s) 1354
AjiI CACGTC 1 cut(s) 400
AjnI CCWGG 4 cut(s) 1383, 1507, 1658, 1703
AjuI GAANNNNNNNTTGG 2 cut(s) 1157, 1189
AleI CACNNNNGTG 1 cut(s) 1028
Alw21I GWGCWC 3 cut(s) 405, 456, 1137
Alw26I GTCTC 3 cut(s) 753, 1038, 1584
AlwI GGATC 2 cut(s) 533, 567
AlwNI CAGNNNCTG 1 cut(s) 746
AoxI GGCC 4 cut(s) 974, 1396, 1545, 1637
ApeKI GCWGC 5 cut(s) 149, 243, 246, 470, 1474
ApoI RAATTY 6 cut(s) 6, 225, 274, 900, 1118, 1528
ArsI GACNNNNNNTTYG 2 cut(s) 1616, 1648
AspLEI GCGC 2 cut(s) 1003, 1113
AspS9I GGNCC 4 cut(s) 262, 974, 1638, 1662
AsuHPI GGTGA 2 cut(s) 1129, 1410
AsuNHI GCTAGC 1 cut(s) 194
AvaII GGWCC 2 cut(s) 262, 1662
BaeGI GKGCMC 2 cut(s) 31, 1084
BalI TGGCCA 1 cut(s) 1398
BanI GGYRCC 1 cut(s) 28
BanII GRGCYC 2 cut(s) 456, 1137
Bbv12I GWGCWC 3 cut(s) 405, 456, 1137
BbvI GCAGC 5 cut(s) 161, 255, 258, 457, 1461
BcgI CGANNNNNNTGC 2 cut(s) 340, 374
BciT130I CCWGG 4 cut(s) 1385, 1509, 1660, 1705
BclI TGATCA 1 cut(s) 1377
BcoDI GTCTC 3 cut(s) 753, 1038, 1584
BcuI ACTAGT 1 cut(s) 1354
BfaI CTAG 7 cut(s) 195, 650, 750, 1287, 1355, 1598, 1635
BfmI CTRYAG 2 cut(s) 51, 438
BfuAI ACCTGC 2 cut(s) 1439, 1542
BisI GCNGC 6 cut(s) 150, 244, 247, 468, 471, 1475
BlsI GCNGC 6 cut(s) 151, 245, 248, 469, 472, 1476
BmcAI AGTACT 1 cut(s) 922
Bme1390I CCNGG 4 cut(s) 1385, 1509, 1660, 1705
Bme18I GGWCC 2 cut(s) 262, 1662
BmgBI CACGTC 1 cut(s) 400
BmgT120I GGNCC 4 cut(s) 262, 974, 1638, 1662
BmiI GGNNCC 4 cut(s) 30, 263, 264, 975
BmrFI CCNGG 4 cut(s) 1385, 1509, 1660, 1705
BmsI GCATC 5 cut(s) 258, 1327, 1443, 1509, 1666
BmtI GCTAGC 1 cut(s) 198
Bpu10I CCTNAGC 1 cut(s) 159
BsaHI GRCGYC 1 cut(s) 1564
BsaJI CCNNGG 4 cut(s) 1209, 1295, 1703, 1704
Bsc4I CCNNNNNNNGG 3 cut(s) 416, 1301, 1390
Bse1I ACTGG 1 cut(s) 938
Bse3DI GCAATG 2 cut(s) 225, 1617
BseBI CCWGG 4 cut(s) 1385, 1509, 1660, 1705
BseDI CCNNGG 4 cut(s) 1209, 1295, 1703, 1704
BseGI GGATG 8 cut(s) 125, 410, 454, 636, 1235, 1434, 1489, 1681
BseLI CCNNNNNNNGG 3 cut(s) 416, 1301, 1390
BseMI GCAATG 2 cut(s) 225, 1617
BseMII CTCAG 4 cut(s) 270, 472, 965, 1565
BseNI ACTGG 1 cut(s) 938
BseRI GAGGAG 2 cut(s) 446, 771
BseSI GKGCMC 2 cut(s) 31, 1084
BseXI GCAGC 5 cut(s) 161, 255, 258, 457, 1461
BshFI GGCC 4 cut(s) 976, 1398, 1547, 1639
BshNI GGYRCC 1 cut(s) 28
BsiHKAI GWGCWC 3 cut(s) 405, 456, 1137
BslFI GGGAC 3 cut(s) 275, 349, 1318
BslI CCNNNNNNNGG 3 cut(s) 416, 1301, 1390
BsmAI GTCTC 3 cut(s) 753, 1038, 1584
BsmFI GGGAC 3 cut(s) 275, 349, 1318
BsmI GAATGC 3 cut(s) 685, 1290, 1413
BsnI GGCC 4 cut(s) 976, 1398, 1547, 1639
Bsp1286I GDGCHC 5 cut(s) 31, 405, 456, 1084, 1137
Bsp143I GATC 6 cut(s) 381, 538, 559, 1037, 1377, 1465
BspACI CCGC 1 cut(s) 468
BspANI GGCC 4 cut(s) 976, 1398, 1547, 1639
BspCNI CTCAG 4 cut(s) 271, 471, 964, 1566
BspHI TCATGA 2 cut(s) 72, 904
BspLI GGNNCC 4 cut(s) 30, 263, 264, 975
BspMI ACCTGC 2 cut(s) 1439, 1542
BspOI GCTAGC 1 cut(s) 198
BspPI GGATC 2 cut(s) 533, 567
BspQI GCTCTTC 1 cut(s) 1221
BspT107I GGYRCC 1 cut(s) 28
BsrDI GCAATG 2 cut(s) 225, 1617
BsrI ACTGG 1 cut(s) 938
BssECI CCNNGG 4 cut(s) 1209, 1295, 1703, 1704
BssMI GATC 6 cut(s) 381, 538, 559, 1037, 1377, 1465
BssNI GRCGYC 1 cut(s) 1564
BssT1I CCWWGG 1 cut(s) 1209
Bst2UI CCWGG 4 cut(s) 1385, 1509, 1660, 1705
Bst4CI ACNGT 3 cut(s) 52, 236, 962
Bst6I CTCTTC 4 cut(s) 480, 748, 846, 1221
BstACI GRCGYC 1 cut(s) 1564
BstAPI GCANNNNNTGC 1 cut(s) 155
BstC8I GCNNGC 9 cut(s) 147, 196, 618, 978, 1267, 1271, 1275, 1279, 1549
BstDEI CTNAG 6 cut(s) 141, 159, 279, 458, 951, 1574
BstF5I GGATG 8 cut(s) 125, 410, 454, 636, 1235, 1434, 1489, 1681
BstHHI GCGC 2 cut(s) 1003, 1113
BstKTI GATC 6 cut(s) 384, 541, 562, 1040, 1380, 1468
BstMAI GTCTC 3 cut(s) 753, 1038, 1584
BstMBI GATC 6 cut(s) 381, 538, 559, 1037, 1377, 1465
BstMWI GCNNNNNNNGC 4 cut(s) 155, 1287, 1544, 1557
BstNI CCWGG 4 cut(s) 1385, 1509, 1660, 1705
BstNSI RCATGY 2 cut(s) 1269, 1277
BstSCI CCNGG 4 cut(s) 1383, 1507, 1658, 1703
BstSFI CTRYAG 2 cut(s) 51, 438
BstSLI GKGCMC 2 cut(s) 31, 1084
BstV1I GCAGC 5 cut(s) 161, 255, 258, 457, 1461
BstXI CCANNNNNNTGG 1 cut(s) 1672
BsuRI GGCC 4 cut(s) 976, 1398, 1547, 1639
BtgZI GCGATG 1 cut(s) 1177
BtrI CACGTC 1 cut(s) 400
BtsCI GGATG 8 cut(s) 125, 410, 454, 636, 1235, 1434, 1489, 1681
BtsI GCAGTG 1 cut(s) 1099
BtsIMutI CAGTG 4 cut(s) 48, 945, 1053, 1099
BveI ACCTGC 2 cut(s) 1439, 1542
Cac8I GCNNGC 9 cut(s) 147, 196, 618, 978, 1267, 1271, 1275, 1279, 1549
CaiI CAGNNNCTG 1 cut(s) 746
CciI TCATGA 2 cut(s) 72, 904
CfoI GCGC 2 cut(s) 1003, 1113
Cfr13I GGNCC 4 cut(s) 262, 974, 1638, 1662
CseI GACGC 2 cut(s) 1544, 1572
Csp6I GTAC 4 cut(s) 531, 921, 984, 1491
CviAII CATG 9 cut(s) 73, 546, 677, 905, 1089, 1220, 1266, 1274, 1316
CviQI GTAC 4 cut(s) 531, 921, 984, 1491
DdeI CTNAG 6 cut(s) 141, 159, 279, 458, 951, 1574
DpnI GATC 6 cut(s) 383, 540, 561, 1039, 1379, 1467
DpnII GATC 6 cut(s) 381, 538, 559, 1037, 1377, 1465
DraI TTTAAA 4 cut(s) 273, 393, 609, 777
EaeI YGGCCR 1 cut(s) 1396
Eam1104I CTCTTC 4 cut(s) 480, 748, 846, 1221
EarI CTCTTC 4 cut(s) 480, 748, 846, 1221
Ecl136II GAGCTC 2 cut(s) 454, 1135
Eco130I CCWWGG 1 cut(s) 1209
Eco24I GRGCYC 2 cut(s) 456, 1137
Eco47I GGWCC 2 cut(s) 262, 1662
Eco53kI GAGCTC 2 cut(s) 454, 1135
Eco57I CTGAAG 2 cut(s) 1463, 1482
EcoICRI GAGCTC 2 cut(s) 454, 1135
EcoO109I RGGNCCY 2 cut(s) 262, 974
EcoRI GAATTC 1 cut(s) 6
EcoRII CCWGG 4 cut(s) 1383, 1507, 1658, 1703
EcoT14I CCWWGG 1 cut(s) 1209
EcoT38I GRGCYC 2 cut(s) 456, 1137
ErhI CCWWGG 1 cut(s) 1209
FaeI CATG 9 cut(s) 76, 549, 680, 908, 1092, 1223, 1269, 1277, 1319
FalI AAGNNNNNCTT 6 cut(s) 566, 598, 1461, 1493, 1596, 1628
FaqI GGGAC 3 cut(s) 275, 349, 1318
FatI CATG 9 cut(s) 72, 545, 676, 904, 1088, 1219, 1265, 1273, 1315
FbaI TGATCA 1 cut(s) 1377
FblI GTMKAC 1 cut(s) 873
Fnu4HI GCNGC 6 cut(s) 150, 244, 247, 468, 471, 1475
FokI GGATG 8 cut(s) 112, 397, 461, 643, 1242, 1421, 1496, 1688
FriOI GRGCYC 2 cut(s) 456, 1137
Fsp4HI GCNGC 6 cut(s) 150, 244, 247, 468, 471, 1475
FspAI RTGCGCAY 1 cut(s) 1002
FspBI CTAG 7 cut(s) 195, 650, 750, 1287, 1355, 1598, 1635
FspI TGCGCA 1 cut(s) 1002
GlaI GCGC 2 cut(s) 1002, 1112
GluI GCNGC 6 cut(s) 150, 244, 247, 468, 471, 1475
HaeIII GGCC 4 cut(s) 976, 1398, 1547, 1639
HgaI GACGC 2 cut(s) 1544, 1572
HhaI GCGC 2 cut(s) 1003, 1113
Hin1I GRCGYC 1 cut(s) 1564
Hin1II CATG 9 cut(s) 76, 549, 680, 908, 1092, 1223, 1269, 1277, 1319
Hin6I GCGC 2 cut(s) 1001, 1111
HinP1I GCGC 2 cut(s) 1001, 1111
HincII GTYRAC 4 cut(s) 660, 1104, 1455, 1693
HindII GTYRAC 4 cut(s) 660, 1104, 1455, 1693
HindIII AAGCTT 4 cut(s) 722, 803, 866, 909
HinfI GANTC 4 cut(s) 793, 1306, 1624, 1646
HphI GGTGA 2 cut(s) 1129, 1410
Hpy166II GTNNAC 7 cut(s) 660, 811, 874, 1104, 1352, 1455, 1693
Hpy188III TCNNGA 6 cut(s) 73, 905, 1035, 1438, 1469, 1481
Hpy8I GTNNAC 7 cut(s) 660, 811, 874, 1104, 1352, 1455, 1693
HpyAV CCTTC 1 cut(s) 208
HpyCH4III ACNGT 3 cut(s) 52, 236, 962
HpyCH4IV ACGT 3 cut(s) 399, 517, 946
HpyCH4V TGCA 9 cut(s) 286, 329, 361, 424, 685, 770, 883, 1092, 1434
HpyF10VI GCNNNNNNNGC 4 cut(s) 155, 1287, 1544, 1557
HpyF3I CTNAG 6 cut(s) 141, 159, 279, 458, 951, 1574
HpySE526I ACGT 3 cut(s) 399, 517, 946
Hsp92I GRCGYC 1 cut(s) 1564
Hsp92II CATG 9 cut(s) 76, 549, 680, 908, 1092, 1223, 1269, 1277, 1319
HspAI GCGC 2 cut(s) 1001, 1111
KflI GGGWCCC 1 cut(s) 262
Ksp22I TGATCA 1 cut(s) 1377
Kzo9I GATC 6 cut(s) 381, 538, 559, 1037, 1377, 1465
LguI GCTCTTC 1 cut(s) 1221
LmnI GCTCC 2 cut(s) 408, 459
Lsp1109I GCAGC 5 cut(s) 161, 255, 258, 457, 1461
LweI GCATC 5 cut(s) 258, 1327, 1443, 1509, 1666
MaeI CTAG 7 cut(s) 195, 650, 750, 1287, 1355, 1598, 1635
MaeII ACGT 3 cut(s) 399, 517, 946
MaeIII GTNAC 4 cut(s) 46, 589, 742, 1416
MalI GATC 6 cut(s) 383, 540, 561, 1039, 1379, 1467
MboI GATC 6 cut(s) 381, 538, 559, 1037, 1377, 1465
MfeI CAATTG 1 cut(s) 130
MhlI GDGCHC 5 cut(s) 31, 405, 456, 1084, 1137
MlsI TGGCCA 1 cut(s) 1398
MluNI TGGCCA 1 cut(s) 1398
MlyI GAGTC 2 cut(s) 1300, 1640
MmeI TCCRAC 3 cut(s) 566, 672, 1216
Mox20I TGGCCA 1 cut(s) 1398
MscI TGGCCA 1 cut(s) 1398
MseI TTAA 9 cut(s) 272, 392, 431, 608, 776, 818, 1020, 1115, 1200
MslI CAYNNNNRTG 3 cut(s) 1028, 1087, 1320
Msp20I TGGCCA 1 cut(s) 1398
MspA1I CMGCKG 3 cut(s) 152, 470, 1460
MspR9I CCNGG 4 cut(s) 1385, 1509, 1660, 1705
MunI CAATTG 1 cut(s) 130
Mva1269I GAATGC 3 cut(s) 685, 1290, 1413
MvaI CCWGG 4 cut(s) 1385, 1509, 1660, 1705
MwoI GCNNNNNNNGC 4 cut(s) 155, 1287, 1544, 1557
NdeII GATC 6 cut(s) 381, 538, 559, 1037, 1377, 1465
NheI GCTAGC 1 cut(s) 194
NlaIII CATG 9 cut(s) 76, 549, 680, 908, 1092, 1223, 1269, 1277, 1319
NlaIV GGNNCC 4 cut(s) 30, 263, 264, 975
NmuCI GTSAC 2 cut(s) 46, 1416
NsbI TGCGCA 1 cut(s) 1002
NspI RCATGY 2 cut(s) 1269, 1277
OliI CACNNNNGTG 1 cut(s) 1028
PaeI GCATGC 2 cut(s) 1269, 1277
PagI TCATGA 2 cut(s) 72, 904
PasI CCCWGGG 1 cut(s) 1704
PciSI GCTCTTC 1 cut(s) 1221
PctI GAATGC 3 cut(s) 685, 1290, 1413
PfeI GAWTC 2 cut(s) 793, 1624
PkrI GCNGC 6 cut(s) 151, 245, 248, 469, 472, 1476
PleI GAGTC 2 cut(s) 1300, 1640
PpsI GAGTC 2 cut(s) 1300, 1640
PpuMI RGGWCCY 1 cut(s) 262
Psp124BI GAGCTC 2 cut(s) 456, 1137
Psp1406I AACGTT 1 cut(s) 946
Psp5II RGGWCCY 1 cut(s) 262
Psp6I CCWGG 4 cut(s) 1383, 1507, 1658, 1703
PspGI CCWGG 4 cut(s) 1383, 1507, 1658, 1703
PspN4I GGNNCC 4 cut(s) 30, 263, 264, 975
PspPI GGNCC 4 cut(s) 262, 974, 1638, 1662
PspPPI RGGWCCY 1 cut(s) 262
PstNI CAGNNNCTG 1 cut(s) 746
PvuII CAGCTG 2 cut(s) 152, 1460
RsaI GTAC 4 cut(s) 532, 922, 985, 1492
RsaNI GTAC 4 cut(s) 531, 921, 984, 1491
RseI CAYNNNNRTG 3 cut(s) 1028, 1087, 1320
SacI GAGCTC 2 cut(s) 456, 1137
SapI GCTCTTC 1 cut(s) 1221
SaqAI TTAA 9 cut(s) 272, 392, 431, 608, 776, 818, 1020, 1115, 1200
SatI GCNGC 6 cut(s) 150, 244, 247, 468, 471, 1475
Sau3AI GATC 6 cut(s) 381, 538, 559, 1037, 1377, 1465
Sau96I GGNCC 4 cut(s) 262, 974, 1638, 1662
ScaI AGTACT 1 cut(s) 922
SchI GAGTC 2 cut(s) 1300, 1640
ScrFI CCNGG 4 cut(s) 1385, 1509, 1660, 1705
SduI GDGCHC 5 cut(s) 31, 405, 456, 1084, 1137
SfaNI GCATC 5 cut(s) 258, 1327, 1443, 1509, 1666
SfcI CTRYAG 2 cut(s) 51, 438
SinI GGWCC 2 cut(s) 262, 1662
SmiMI CAYNNNNRTG 3 cut(s) 1028, 1087, 1320
SpeI ACTAGT 1 cut(s) 1354
SphI GCATGC 2 cut(s) 1269, 1277
SsiI CCGC 1 cut(s) 468
SspMI CTAG 7 cut(s) 195, 650, 750, 1287, 1355, 1598, 1635
SstI GAGCTC 2 cut(s) 456, 1137
StyD4I CCNGG 4 cut(s) 1383, 1507, 1658, 1703
StyI CCWWGG 1 cut(s) 1209
TaaI ACNGT 3 cut(s) 52, 236, 962
TaiI ACGT 3 cut(s) 402, 520, 949
TaqI TCGA 2 cut(s) 200, 1036
TatI WGTACW 1 cut(s) 920
TauI GCSGC 1 cut(s) 470
TfiI GAWTC 2 cut(s) 793, 1624
Tru1I TTAA 9 cut(s) 272, 392, 431, 608, 776, 818, 1020, 1115, 1200
Tru9I TTAA 9 cut(s) 272, 392, 431, 608, 776, 818, 1020, 1115, 1200
TscAI CASTG 4 cut(s) 55, 945, 1053, 1099
TseFI GTSAC 2 cut(s) 46, 1416
TseI GCWGC 5 cut(s) 149, 243, 246, 470, 1474
Tsp45I GTSAC 2 cut(s) 46, 1416
TspDTI ATGAA 8 cut(s) 61, 105, 815, 893, 921, 978, 1178, 1208
TspRI CASTG 4 cut(s) 55, 945, 1053, 1099
VpaK11BI GGWCC 2 cut(s) 262, 1662
XapI RAATTY 6 cut(s) 6, 225, 274, 900, 1118, 1528
XceI RCATGY 2 cut(s) 1269, 1277
XcmI CCANNNNNNNNNTGG 1 cut(s) 1391
XmiI GTMKAC 1 cut(s) 873
XspI CTAG 7 cut(s) 195, 650, 750, 1287, 1355, 1598, 1635
ZrmI AGTACT 1 cut(s) 922
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.