Rw0G019450

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Contig00870
OG0000458
Physical Location & Seq
Reverse (-)
6460 .. 7941
1482 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw0G019450.1

Sequence Viewer

Length: 1482 bp
ATGAGCTATCCCTACTACTCTCCTCCACCACCTTCACCACCTCTCCCTTGTGCTCCTCCACCACCGTCTCCACCGCCCCCATGTAACCCTGTAACCGCATCACCACCTCCGCCTCCACCACCTCATCGCCATGGCCATCATCACCATCATCATCCAAATCACCCCGAAACAATACAATGCGCAACACCTCCTCCTCCATCACCATCACCACCACCACCACCTCCCCATCACCATGACTATCCCAAGCCACCGCCTCCGTCATCTCCTCCTCCACCACCTCATCACCATGACTATCCTAAGCCACCATCTCCATCACCTCCACCGCCACCACATCATCATCATCATCATCATCACTACCCTAAACCATCACCACCTCCTCCATCACCATCTCCTCCGCCACCGCATCACCATGACTATCCTAAACCTCCGCCACCTTCTCCTTCACCACCTCACCACCATGACTACCCTAAGCCTCCACCACCCAGTGCTTCACCACCACACCACCATGACTACCCAAAGCCTCCACCACCTACTGCATCACCACCACATCACCATGACTATCCACCGCCAACCTGGGCTACTCCTCCAGCTTCACCACCTCACGGCTCGGCTCCACCACCACATGGTTATCATCACACCCCACCTACTGCCCTCCCACCACCACATTACCCTCCAAAATCATCACCACCAAAACCCAGCTATGAGGCGCCACCTCCAAAGTCCGTATACCCACCAAAACCCAGTGAAGGTGCTCCTCCACCCAAACCAGTATATCCACCAAAGCCAAGTAAGGGCGCACCACCCCCTAAGTCGTACCCACCAAAGCCAAGCAAGGGCGCACCGCCACCAAGGTCCGTATACCCAAAGCCCAGTAAGGGAGCTCCACCACCGAAATCTTCATATCCACCAAAGCCAAGCAAGGGAGCTCCTCCACCAAAGTCAGTAATATATCCACCAAAGCCAAGTAAGGGTGCGCCACCTCCAGGGTACAATGGACATTTTCCTCCACCTCCCACATACTACGGTGCTCCTCCTCCACCTTTCGGAGGCATCCCACCGTCCTCCAATGAACTGGCCCCACCTCCCGGCGGGAAAAATCACACCACTGTCATCGCCGTGTGTGTCTCACTAGGCGGTGCATTCTTCCTCGCATTCCTTCTGGTCGGTCTCTTTTGCTTCGCCAAGAAGAAGAAGAAGAGAGTGATGGTTCCCGCAGCCGTTCCTTGCGAACCCGAAGAAGAAGTCCATGAAACAGTCATAGCAACAGGTGTTTACGGCGGCGGCGAAGCAAGTGCTGCTGCAGCCCGAGGAGGAGCAGGTTACGGGGGAGAAGGAGGGGGCCCACCACCTCATGAACCCGAGATAGTCGGGGCTGGTGGTGCCGGTTATGGTCATCATCCAAGCAATGCATGCATTTTTCATAAACGTGTGATCGAGTTCGTTGCATTCATTAGGTTTGTAATAAAGGTTGGTCGACATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04062 ko04144 ko04520 ko04530 ko04666 ko04810 ko05100 ko05130 ko05131 ko05132 ko05231 map04062 map04144 map04520 map04530 map04666 map04810 map05100 map05130 map05131 map05132 map05231
Pfam Domains
Protein Families
No domains found.

Protein Analysis

493

Amino Acids

51.89

Weight (kDa)

9.46

Isoelectric Point (pI)

87.87

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000458)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G34320 AT1G34320
fragaria_vesca FvH4_2g12340 FvH4_2g12350 FvH4_2g12350 FvH4_2g12350 FvH4_2g12350 FvH4_5g36070 FvH4_5g36100 FvH4_5g36130 FvH4_5g36140
malus_domestica MD05G1039900.v1.1 MD10G1045400.v1.1 MD10G1045600.v1.1 MD10G1045700.v1.1 MD10G1045800.v1.1 MD12G1057900.v1.1
prunus_persica Prupe.1G525500_v2.0.a1 Prupe.8G052300_v2.0.a1 Prupe.8G052300_v2.0.a1 Prupe.8G052300_v2.0.a1 Prupe.8G052300_v2.0.a1 Prupe.8G052300_v2.0.a1 Prupe.8G052300_v2.0.a1 Prupe.8G052600_v2.0.a1 Prupe.8G052600_v2.0.a1 Prupe.8G052600_v2.0.a1 Prupe.8G052600_v2.0.a1 Prupe.8G052600_v2.0.a1 Prupe.8G052600_v2.0.a1 Prupe.8G052600_v2.0.a1
pyrus_communis pycom05g03250 pycom10g03180 pycom10g03190 pycom15g33960
rosa_chinensis RchiOBHm_Chr3g0484671 RchiOBHm_Chr6g0272351 RchiOBHm_Chr6g0272361 RchiOBHm_Chr7g0237881
rosa_laevigata RLG00000000952 RLG00000000960 RLG00000001025 RLG00000008689 RLG00000010609 RLG00000013679 RLG00000013680
rosa_multiflora Rmu_sc0001339.1_g000015 Rmu_sc0002877.1_g000020 Rmu_sc0009379.1_g000003 Rmu_ssc0000199.1_g000001 Rmu_ssc0000321.1_g000001
rosa_roxburghii Rroxscaffold_1G00039160 Rroxscaffold_3G00223500 Rroxscaffold_3G00223670 Rroxscaffold_7G00196370 Rroxscaffold_7G00196380
rosa_rugosa Rorug06G0068200 Rorug06G0068300 Rorug06G0068400 Rorug07G0302100 Rorug07G0308600 Rorug07G0309200.1
rosa_samantha Rh3AG263300 Rh3DG292000 Rh6AG113700 Rh6AG184400 Rh6AG184500 Rh6BG187800 Rh6BG187900 Rh6CG185900 Rh6DG177600 Rh6DG177700 Rh7AG458500 Rh7AG464200 Rh7AG464500 Rh7BG429200 Rh7BG434200 Rh7CG476400 Rh7CG481600 Rh7CG482700 Rh7DG445700 Rh7DG450300 Rh7DG451400
rosa_wichuraiana Rw0G019450 Rw6G015900 Rw6G015910 Rw6G015940 Rw6G015950 Rw7G037980 Rw7G038410 Rw7G038470

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 181
Acc36I ACCTGC 1 cut(s) 1307
AccB1I GGYRCC 2 cut(s) 706, 1379
AccB7I CCANNNNNTGG 1 cut(s) 623
AccI GTMKAC 3 cut(s) 726, 858, 1474
AcoI YGGCCR 1 cut(s) 133
AcyI GRCGYC 1 cut(s) 707
AdeI CACNNNGTG 1 cut(s) 485
AfaI GTAC 2 cut(s) 815, 989
AflIII ACRYGT 1 cut(s) 1426
AjnI CCWGG 2 cut(s) 572, 982
AluBI AGCT 5 cut(s) 6, 590, 699, 881, 926
AluI AGCT 5 cut(s) 6, 590, 699, 881, 926
Alw21I GWGCWC 5 cut(s) 55, 754, 883, 928, 1030
Alw26I GTCTC 3 cut(s) 72, 1129, 1172
Ama87I CYCGRG 2 cut(s) 1305, 1358
AoxI GGCC 3 cut(s) 133, 1074, 1339
ApaI GGGCCC 1 cut(s) 1343
ApeKI GCWGC 4 cut(s) 1214, 1295, 1298, 1301
ArsI GACNNNNNNTTYG 2 cut(s) 1227, 1259
AspLEI GCGC 5 cut(s) 182, 709, 797, 839, 976
AspS9I GGNCC 4 cut(s) 852, 1075, 1339, 1340
AsuC2I CCSGG 1 cut(s) 1086
AvaI CYCGRG 2 cut(s) 1305, 1358
AvaII GGWCC 1 cut(s) 852
BaeGI GKGCMC 1 cut(s) 1343
BalI TGGCCA 1 cut(s) 135
BanI GGYRCC 2 cut(s) 706, 1379
BanII GRGCYC 3 cut(s) 883, 928, 1343
Bbv12I GWGCWC 5 cut(s) 55, 754, 883, 928, 1030
BbvI GCAGC 4 cut(s) 1226, 1282, 1285, 1313
BceAI ACGGC 4 cut(s) 619, 1100, 1202, 1291
BcgI CGANNNNNNTGC 4 cut(s) 1274, 1308, 1424, 1458
BciT130I CCWGG 2 cut(s) 574, 984
BcnI CCSGG 1 cut(s) 1086
BcoDI GTCTC 3 cut(s) 72, 1129, 1172
BfaI CTAG 1 cut(s) 1130
BfmI CTRYAG 1 cut(s) 1299
BfoI RGCGCY 1 cut(s) 710
BfuAI ACCTGC 1 cut(s) 1307
BisI GCNGC 6 cut(s) 1215, 1279, 1282, 1296, 1299, 1302
BlsI GCNGC 6 cut(s) 1216, 1280, 1283, 1297, 1300, 1303
Bme1390I CCNGG 3 cut(s) 574, 984, 1086
Bme18I GGWCC 1 cut(s) 852
BmeT110I CYCGRG 2 cut(s) 1305, 1358
BmgT120I GGNCC 4 cut(s) 852, 1075, 1339, 1340
BmiI GGNNCC 7 cut(s) 612, 708, 1077, 1209, 1340, 1341, 1381
BmrFI CCNGG 3 cut(s) 574, 984, 1086
BmrI ACTGGG 3 cut(s) 477, 735, 864
BmsI GCATC 4 cut(s) 107, 412, 545, 1059
BmuI ACTGGG 3 cut(s) 477, 735, 864
BpmI CTGGAG 2 cut(s) 570, 966
Bpu10I CCTNAGC 2 cut(s) 297, 468
BpuMI CCSGG 1 cut(s) 1086
BsaHI GRCGYC 1 cut(s) 707
BsaI GGTCTC 1 cut(s) 1172
BsaJI CCNNGG 5 cut(s) 130, 573, 848, 983, 1306
BsaXI ACNNNNNCTCC 4 cut(s) 27, 57, 175, 205
Bse118I RCCGGY 1 cut(s) 1382
Bse1I ACTGG 5 cut(s) 483, 741, 767, 870, 1077
Bse3DI GCAATG 1 cut(s) 1411
BseBI CCWGG 2 cut(s) 574, 984
BseDI CCNNGG 5 cut(s) 130, 573, 848, 983, 1306
BseGI GGATG 3 cut(s) 151, 1050, 1396
BseMI GCAATG 1 cut(s) 1411
BseNI ACTGG 5 cut(s) 483, 741, 767, 870, 1077
BseSI GKGCMC 1 cut(s) 1343
BseXI GCAGC 4 cut(s) 1226, 1282, 1285, 1313
BseYI CCCAGC 1 cut(s) 695
BshFI GGCC 3 cut(s) 135, 1076, 1341
BshNI GGYRCC 2 cut(s) 706, 1379
BsiHKAI GWGCWC 5 cut(s) 55, 754, 883, 928, 1030
BsiHKCI CYCGRG 2 cut(s) 1305, 1358
BsiSI CCGG 2 cut(s) 1086, 1383
BsmAI GTCTC 3 cut(s) 72, 1129, 1172
BsmBI CGTCTC 1 cut(s) 72
BsmI GAATGC 3 cut(s) 1139, 1151, 1445
BsnI GGCC 3 cut(s) 135, 1076, 1341
Bso31I GGTCTC 1 cut(s) 1172
BsoBI CYCGRG 2 cut(s) 1305, 1358
Bsp120I GGGCCC 1 cut(s) 1339
Bsp1286I GDGCHC 6 cut(s) 55, 754, 883, 928, 1030, 1343
Bsp143I GATC 1 cut(s) 1431
Bsp19I CCATGG 1 cut(s) 130
BspANI GGCC 3 cut(s) 135, 1076, 1341
BspHI TCATGA 1 cut(s) 1351
BspLI GGNNCC 7 cut(s) 612, 708, 1077, 1209, 1340, 1341, 1381
BspMAI CTGCAG 1 cut(s) 1303
BspMI ACCTGC 1 cut(s) 1307
BspT107I GGYRCC 2 cut(s) 706, 1379
BspTNI GGTCTC 1 cut(s) 1172
BsrDI GCAATG 1 cut(s) 1411
BsrFI RCCGGY 1 cut(s) 1382
BsrI ACTGG 5 cut(s) 483, 741, 767, 870, 1077
BssAI RCCGGY 1 cut(s) 1382
BssECI CCNNGG 5 cut(s) 130, 573, 848, 983, 1306
BssMI GATC 1 cut(s) 1431
BssNAI GTATAC 2 cut(s) 727, 859
BssNI GRCGYC 1 cut(s) 707
BssT1I CCWWGG 2 cut(s) 130, 848
Bst1107I GTATAC 2 cut(s) 727, 859
Bst2UI CCWGG 2 cut(s) 574, 984
Bst4CI ACNGT 5 cut(s) 66, 1025, 1059, 1108, 1255
Bst6I CTCTTC 1 cut(s) 1190
BstACI GRCGYC 1 cut(s) 707
BstAPI GCANNNNNTGC 2 cut(s) 1295, 1410
BstC8I GCNNGC 1 cut(s) 1411
BstDEI CTNAG 3 cut(s) 297, 468, 807
BstDSI CCRYGG 1 cut(s) 130
BstENI CCTNNNNNAGG 1 cut(s) 1044
BstF5I GGATG 3 cut(s) 151, 1050, 1396
BstH2I RGCGCY 1 cut(s) 710
BstHHI GCGC 5 cut(s) 182, 709, 797, 839, 976
BstKTI GATC 1 cut(s) 1434
BstMAI GTCTC 3 cut(s) 72, 1129, 1172
BstMBI GATC 1 cut(s) 1431
BstMWI GCNNNNNNNGC 4 cut(s) 1295, 1301, 1379, 1410
BstNI CCWGG 2 cut(s) 574, 984
BstNSI RCATGY 1 cut(s) 1413
BstSCI CCNGG 3 cut(s) 572, 982, 1084
BstSFI CTRYAG 1 cut(s) 1299
BstSLI GKGCMC 1 cut(s) 1343
BstV1I GCAGC 4 cut(s) 1226, 1282, 1285, 1313
BstXI CCANNNNNNTGG 1 cut(s) 1072
BstZ17I GTATAC 2 cut(s) 727, 859
BsuRI GGCC 3 cut(s) 135, 1076, 1341
BtgI CCRYGG 1 cut(s) 130
BtgZI GCGATG 2 cut(s) 110, 1096
BtsCI GGATG 3 cut(s) 151, 1050, 1396
BtsIMutI CAGTG 3 cut(s) 490, 748, 1104
BveI ACCTGC 1 cut(s) 1307
Cac8I GCNNGC 1 cut(s) 1411
CciI TCATGA 1 cut(s) 1351
CfoI GCGC 5 cut(s) 182, 709, 797, 839, 976
Cfr10I RCCGGY 1 cut(s) 1382
Cfr13I GGNCC 4 cut(s) 852, 1075, 1339, 1340
Csp6I GTAC 2 cut(s) 814, 988
CviQI GTAC 2 cut(s) 814, 988
DdeI CTNAG 3 cut(s) 297, 468, 807
DinI GGCGCC 1 cut(s) 708
DpnI GATC 1 cut(s) 1433
DpnII GATC 1 cut(s) 1431
DraIII CACNNNGTG 1 cut(s) 485
EaeI YGGCCR 1 cut(s) 133
Eam1104I CTCTTC 1 cut(s) 1190
EarI CTCTTC 1 cut(s) 1190
EciI GGCGGA 3 cut(s) 99, 384, 417
Ecl136II GAGCTC 2 cut(s) 881, 926
Eco130I CCWWGG 2 cut(s) 130, 848
Eco24I GRGCYC 3 cut(s) 883, 928, 1343
Eco31I GGTCTC 1 cut(s) 1172
Eco47I GGWCC 1 cut(s) 852
Eco53kI GAGCTC 2 cut(s) 881, 926
Eco88I CYCGRG 2 cut(s) 1305, 1358
EcoICRI GAGCTC 2 cut(s) 881, 926
EcoNI CCTNNNNNAGG 1 cut(s) 1044
EcoO109I RGGNCCY 1 cut(s) 1339
EcoRII CCWGG 2 cut(s) 572, 982
EcoT14I CCWWGG 2 cut(s) 130, 848
EcoT22I ATGCAT 2 cut(s) 1411, 1415
EcoT38I GRGCYC 3 cut(s) 883, 928, 1343
EgeI GGCGCC 1 cut(s) 708
EheI GGCGCC 1 cut(s) 708
ErhI CCWWGG 2 cut(s) 130, 848
Esp3I CGTCTC 1 cut(s) 72
FauI CCCGC 2 cut(s) 1082, 1219
FblI GTMKAC 3 cut(s) 726, 858, 1474
Fnu4HI GCNGC 6 cut(s) 1215, 1279, 1282, 1296, 1299, 1302
FokI GGATG 3 cut(s) 138, 1037, 1383
FriOI GRGCYC 3 cut(s) 883, 928, 1343
Fsp4HI GCNGC 6 cut(s) 1215, 1279, 1282, 1296, 1299, 1302
FspBI CTAG 1 cut(s) 1130
FspI TGCGCA 1 cut(s) 181
GlaI GCGC 5 cut(s) 181, 708, 796, 838, 975
GluI GCNGC 6 cut(s) 1215, 1279, 1282, 1296, 1299, 1302
GsaI CCCAGC 1 cut(s) 699
GsuI CTGGAG 2 cut(s) 570, 966
HaeII RGCGCY 1 cut(s) 710
HaeIII GGCC 3 cut(s) 135, 1076, 1341
HapII CCGG 2 cut(s) 1086, 1383
HhaI GCGC 5 cut(s) 182, 709, 797, 839, 976
Hin1I GRCGYC 1 cut(s) 707
Hin6I GCGC 5 cut(s) 180, 707, 795, 837, 974
HinP1I GCGC 5 cut(s) 180, 707, 795, 837, 974
HincII GTYRAC 1 cut(s) 1475
HindII GTYRAC 1 cut(s) 1475
HpaII CCGG 2 cut(s) 1086, 1383
Hpy166II GTNNAC 4 cut(s) 727, 859, 1273, 1475
Hpy188I TCNGA 1 cut(s) 1046
Hpy188III TCNNGA 1 cut(s) 1352
Hpy8I GTNNAC 4 cut(s) 727, 859, 1273, 1475
HpyAV CCTTC 6 cut(s) 42, 444, 450, 740, 1166, 1325
HpyCH4III ACNGT 5 cut(s) 66, 1025, 1059, 1108, 1255
HpyCH4IV ACGT 1 cut(s) 1426
HpyCH4V TGCA 6 cut(s) 536, 1139, 1301, 1409, 1413, 1445
HpyF10VI GCNNNNNNNGC 4 cut(s) 1295, 1301, 1379, 1410
HpyF3I CTNAG 3 cut(s) 297, 468, 807
HpySE526I ACGT 1 cut(s) 1426
Hsp92I GRCGYC 1 cut(s) 707
HspAI GCGC 5 cut(s) 180, 707, 795, 837, 974
KasI GGCGCC 1 cut(s) 706
Kzo9I GATC 1 cut(s) 1431
LmnI GCTCC 9 cut(s) 58, 616, 757, 878, 886, 923, 931, 1033, 1313
Lsp1109I GCAGC 4 cut(s) 1226, 1282, 1285, 1313
LweI GCATC 4 cut(s) 107, 412, 545, 1059
MaeI CTAG 1 cut(s) 1130
MaeII ACGT 1 cut(s) 1426
MaeIII GTNAC 3 cut(s) 83, 91, 1319
MalI GATC 1 cut(s) 1433
MboI GATC 1 cut(s) 1431
MboII GAAGA 8 cut(s) 888, 1135, 1198, 1201, 1204, 1207, 1247, 1250
MhlI GDGCHC 6 cut(s) 55, 754, 883, 928, 1030, 1343
MlsI TGGCCA 1 cut(s) 135
MluNI TGGCCA 1 cut(s) 135
Mly113I GGCGCC 1 cut(s) 707
Mox20I TGGCCA 1 cut(s) 135
Mph1103I ATGCAT 2 cut(s) 1411, 1415
MscI TGGCCA 1 cut(s) 135
MseI TTAA 1 cut(s) 1480
MslI CAYNNNNRTG 9 cut(s) 129, 231, 285, 408, 456, 504, 552, 1115, 1425
Msp20I TGGCCA 1 cut(s) 135
MspI CCGG 2 cut(s) 1086, 1383
MspR9I CCNGG 3 cut(s) 574, 984, 1086
Mva1269I GAATGC 3 cut(s) 1139, 1151, 1445
MvaI CCWGG 2 cut(s) 574, 984
MwoI GCNNNNNNNGC 4 cut(s) 1295, 1301, 1379, 1410
NarI GGCGCC 1 cut(s) 707
NciI CCSGG 1 cut(s) 1086
NcoI CCATGG 1 cut(s) 130
NdeII GATC 1 cut(s) 1431
NlaIV GGNNCC 7 cut(s) 612, 708, 1077, 1209, 1340, 1341, 1381
NmeAIII GCCGAG 1 cut(s) 587
NsbI TGCGCA 1 cut(s) 181
NsiI ATGCAT 2 cut(s) 1411, 1415
NspI RCATGY 1 cut(s) 1413
PaeI GCATGC 1 cut(s) 1413
PagI TCATGA 1 cut(s) 1351
PcsI WCGNNNNNNNCGW 1 cut(s) 1281
PctI GAATGC 3 cut(s) 1139, 1151, 1445
PflMI CCANNNNNTGG 1 cut(s) 623
PkrI GCNGC 6 cut(s) 1216, 1280, 1283, 1297, 1300, 1303
PluTI GGCGCC 1 cut(s) 710
Psp124BI GAGCTC 2 cut(s) 883, 928
Psp6I CCWGG 2 cut(s) 572, 982
PspFI CCCAGC 1 cut(s) 695
PspGI CCWGG 2 cut(s) 572, 982
PspN4I GGNNCC 7 cut(s) 612, 708, 1077, 1209, 1340, 1341, 1381
PspOMI GGGCCC 1 cut(s) 1339
PspPI GGNCC 4 cut(s) 852, 1075, 1339, 1340
PstI CTGCAG 1 cut(s) 1303
RsaI GTAC 2 cut(s) 815, 989
RsaNI GTAC 2 cut(s) 814, 988
RseI CAYNNNNRTG 9 cut(s) 129, 231, 285, 408, 456, 504, 552, 1115, 1425
SacI GAGCTC 2 cut(s) 883, 928
SalI GTCGAC 1 cut(s) 1473
SaqAI TTAA 1 cut(s) 1480
SatI GCNGC 6 cut(s) 1215, 1279, 1282, 1296, 1299, 1302
Sau3AI GATC 1 cut(s) 1431
Sau96I GGNCC 4 cut(s) 852, 1075, 1339, 1340
ScrFI CCNGG 3 cut(s) 574, 984, 1086
SduI GDGCHC 6 cut(s) 55, 754, 883, 928, 1030, 1343
SfaNI GCATC 4 cut(s) 107, 412, 545, 1059
SfcI CTRYAG 1 cut(s) 1299
SfoI GGCGCC 1 cut(s) 708
SinI GGWCC 1 cut(s) 852
SmiMI CAYNNNNRTG 9 cut(s) 129, 231, 285, 408, 456, 504, 552, 1115, 1425
SphI GCATGC 1 cut(s) 1413
SspDI GGCGCC 1 cut(s) 706
SspMI CTAG 1 cut(s) 1130
SstI GAGCTC 2 cut(s) 883, 928
StyD4I CCNGG 3 cut(s) 572, 982, 1084
StyI CCWWGG 2 cut(s) 130, 848
TaaI ACNGT 5 cut(s) 66, 1025, 1059, 1108, 1255
TaiI ACGT 1 cut(s) 1429
TaqI TCGA 2 cut(s) 1434, 1474
TaqII GACCGA 1 cut(s) 1154
TauI GCSGC 2 cut(s) 1281, 1284
Tru1I TTAA 1 cut(s) 1480
Tru9I TTAA 1 cut(s) 1480
TscAI CASTG 3 cut(s) 490, 748, 1111
TseI GCWGC 4 cut(s) 1214, 1295, 1298, 1301
TspDTI ATGAA 6 cut(s) 888, 1083, 1263, 1368, 1409, 1438
TspGWI ACGGA 3 cut(s) 246, 712, 844
TspRI CASTG 3 cut(s) 490, 748, 1111
Van91I CCANNNNNTGG 1 cut(s) 623
VpaK11BI GGWCC 1 cut(s) 852
XagI CCTNNNNNAGG 1 cut(s) 1044
XceI RCATGY 1 cut(s) 1413
XcmI CCANNNNNNNNNTGG 1 cut(s) 570
XmiI GTMKAC 3 cut(s) 726, 858, 1474
XspI CTAG 1 cut(s) 1130
Zsp2I ATGCAT 2 cut(s) 1411, 1415
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.