Rorug07G0302100

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
OG0000458
Physical Location & Seq
Forward (+)
30039703 .. 30064824
25122 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0302100.1

Sequence Viewer

Length: 2307 bp
ATGGAAATCGAGAAACGAGCGGATGATCCAGGTAGCAAAGCCATGGAGGACAAATACAATGTTGAAGCCACTGAAAATCAAGCCAATGAAGCGCTGCGTTTGCCTATTACAGAGGCAGCACCCATATATGAGCAGATTCTGACTGTGTTTCCCACTGCAGCAAAATATTGGAAGCAATATGTGGAGGCACAGATTGCTGTAAATAATGATGATGCTACAAAACAGATATTTAGCCGGTGTTTGTTGATTTGTCTTCAAGTTCCACTCTGGCGATGCTACATTCGTTTCATCAGAAAGGTCAATGACAAGAAGGGGGTGGAGGGTCAAGAAGAGACTAGAAAAGCTTTTGATTTTATGCTCAGTTATGTTGGAGCTGATATAGCGTCTGGGCCTGTGTGGATGGAGTACATCGCTTTTTTAAAGTCGTTACAGGCTGTAAGCACACAGGAAGAGTCGCAACGGATGACTGCTGTGCGGAAAGCATACCAGAGAGCCATTGTTACTCCTACGCATCACATTGAACAACTTTGGAAGGATTATGAAAATTTTGAAAATTCTGTCAGCCGCCATCTGGCAAAAGGACTGTTATCTGAATATCAACCAAAATTTAACAGTGCCAGGGCCGTTTATAGGGAGCGGAAGAAGTACGTTGACGAAATTGACTTGAATATGCTTGCTGTGCCACCAACTGGCTCTTACAAGGAAGAATTGCAGTGGATGGCGTGGAAAAAGTTGCTGGGTTTTGAAAAAGGGAATCCACAAAGGATAGACAATGGATCATCCAACAAGCGAATTATTTTCACATATGAGCAGTGTCTAATGTATCTATACCATTATCCTGATATATGGTATGACTATGCGATGTGGCATGCAAAAAGTGGATCAATAGATGCTGCAATTAAAGTATTTCAGAGAGCATTGAAGGCTCTTCCTGACTCGGAGATGCTTAGATATGCGTATGCAGAGCTGGAAGAATCCCGTGGAGCGATTCAGCCTACAAAAAAAATATATGAGAACCTTTTGGGAGACGGTGTTAACACAACAGCCCTTGCTCATATACAGTTTATTCGCTTTTTAAGGAGAACTGAAGGAGTTGAAGCAGCTCGCAAGTACTTTTTAGATGCACGCAAATCCCCAAACTGCACATATCATGTTTATGTTGCTTATGCAATGGTGGCCTTATGTCTTGACAAGGATCCCAAGATGGCACACAATGTTTTTGAAGCTGGGCTGAAACAGTTTATGCACGAGCCTGTATACATTCTTGAATATGCAGATTTTTTAACTCGCTTGAATGATGATAGAAATATTCGGGCCCTGTTTGAAAGGGCATTAAGCTCACTACCACCAGAAAAATCTGTTGAGGTTTGGAAACAATTTGCCAAATTTGAGCAAACTTTTGGAGATCTGGCTAGCATGTTGAAGGTTGAGCAAAGAAAAAAAGAAGCACTTTCTACAACTGATGAAGAGGGACCTTCATCTTTGGAAAGTTCGTTACAAGAGGTTGTATCTCGATATAGTTTCATGGATCTTTGGCCCTGCTCTACAAAGGATCTGGACCATTTAGCCCGACAAGAGTGGCTTGCTAAAAATATTAATAAGAAAGTGGAGAAGTCAACTATGCTAAGTGGACCTGACTTTGCAGACAAGGGTTCTACTGGCCTGATAAGCAATTCATCAGTGTCTGCAAAAGTAGTTTATCCAGATACTAATCAAATGGTTATCTATGATCCAAGGCAAAAACCTGGGGTTGGAAATTTTCAGGCCACGACAGTAGCTGGAGTTCTCGCTGCTTCTAGCACCTTGTCAAATCCTGTTGTTGCAGCAGTAGGTAGCCAAACAAGTGCCTTTGATGAAATATTAAAAGTAACACCACCTGTTTTGGTGGCCTTCTTAGCAAATTTACCGATCATTGAAGGTCCAACCCCAGATGTGGATGTTGTGCTATCAATTTGTTTGCAAAGTGATATACCAACACCACAGCCTGCAAAGTCAGGGACTGCCCCTATGCAATTTCCGTCAGTACCTGCTCCTTCTTCTACGAGTGACCTTTCTGTTTCAAGCAAGTCTCATCCCATCCCAAGTGGGTCATCTTTCAAGCCAGCCAGGGGGAAACGAAAAAATATAGATAGGAAAGACGATGATGAAACTACAGTCCAGAGCCAGCCACTCCCAACAGATGCTTTCAGGATACGGCAGATCCAGAAGGCTAGCCGTTCTGCTTCAGCTAGCCGCACTGCTTCTCAAACAGGATCAGTTTCGTATGGAAGTGCAATTTCTGGAGATTTATCTGGTAGCACCGGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04062 ko04144 ko04520 ko04530 ko04666 ko04810 ko05100 ko05130 ko05131 ko05132 ko05231 map04062 map04144 map04520 map04530 map04666 map04810 map05100 map05130 map05131 map05132 map05231
Pfam Domains
Protein Families
No domains found.

Protein Analysis

768

Amino Acids

86.12

Weight (kDa)

7.15

Isoelectric Point (pI)

45.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Suf PF05843 16 - 519 2.6e-159 Suppressor of forked protein (Suf)
HAT_PRP39_N PF23240 36 - 181 1.3e-25 PRP39 N-terminal HAT repeat
HAT_PRP39_C PF23241 235 - 361 1.4e-21 PRP39 C-terminal HAT repeat
HAT_Syf1_CNRKL1_N PF23233 255 - 327 5.9e-07 Pre-mRNA-splicing factor Syf1/CNRKL1 N-terminal HAT repeat
TPR_14 PF13428 280 - 323 1.9e-07 Tetratricopeptide repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000458)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G34320 AT1G34320
fragaria_vesca FvH4_2g12340 FvH4_2g12350 FvH4_2g12350 FvH4_2g12350 FvH4_2g12350 FvH4_5g36070 FvH4_5g36100 FvH4_5g36130 FvH4_5g36140
malus_domestica MD05G1039900.v1.1 MD10G1045400.v1.1 MD10G1045600.v1.1 MD10G1045700.v1.1 MD10G1045800.v1.1 MD12G1057900.v1.1
prunus_persica Prupe.1G525500_v2.0.a1 Prupe.8G052300_v2.0.a1 Prupe.8G052300_v2.0.a1 Prupe.8G052300_v2.0.a1 Prupe.8G052300_v2.0.a1 Prupe.8G052300_v2.0.a1 Prupe.8G052300_v2.0.a1 Prupe.8G052600_v2.0.a1 Prupe.8G052600_v2.0.a1 Prupe.8G052600_v2.0.a1 Prupe.8G052600_v2.0.a1 Prupe.8G052600_v2.0.a1 Prupe.8G052600_v2.0.a1 Prupe.8G052600_v2.0.a1
pyrus_communis pycom05g03250 pycom10g03180 pycom10g03190 pycom15g33960
rosa_chinensis RchiOBHm_Chr3g0484671 RchiOBHm_Chr6g0272351 RchiOBHm_Chr6g0272361 RchiOBHm_Chr7g0237881
rosa_laevigata RLG00000000952 RLG00000000960 RLG00000001025 RLG00000008689 RLG00000010609 RLG00000013679 RLG00000013680
rosa_multiflora Rmu_sc0001339.1_g000015 Rmu_sc0002877.1_g000020 Rmu_sc0009379.1_g000003 Rmu_ssc0000199.1_g000001 Rmu_ssc0000321.1_g000001
rosa_roxburghii Rroxscaffold_1G00039160 Rroxscaffold_3G00223500 Rroxscaffold_3G00223670 Rroxscaffold_7G00196370 Rroxscaffold_7G00196380
rosa_rugosa Rorug06G0068200 Rorug06G0068300 Rorug06G0068400 Rorug07G0302100 Rorug07G0308600 Rorug07G0309200.1
rosa_samantha Rh3AG263300 Rh3DG292000 Rh6AG113700 Rh6AG184400 Rh6AG184500 Rh6BG187800 Rh6BG187900 Rh6CG185900 Rh6DG177600 Rh6DG177700 Rh7AG458500 Rh7AG464200 Rh7AG464500 Rh7BG429200 Rh7BG434200 Rh7CG476400 Rh7CG481600 Rh7CG482700 Rh7DG445700 Rh7DG450300 Rh7DG451400
rosa_wichuraiana Rw0G019450 Rw6G015900 Rw6G015910 Rw6G015940 Rw6G015950 Rw7G037980 Rw7G038410 Rw7G038470

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 2035
AccB7I CCANNNNNTGG 1 cut(s) 689
AccBSI CCGCTC 2 cut(s) 20, 637
AccI GTMKAC 1 cut(s) 1257
AciI CCGC 5 cut(s) 20, 475, 565, 637, 2233
AcsI RAATTY 6 cut(s) 544, 553, 605, 1385, 1756, 1900
AcuI CTGAAG 2 cut(s) 1107, 2208
AfaI GTAC 4 cut(s) 407, 647, 1112, 2025
AfeI AGCGCT 1 cut(s) 93
AfiI CCNNNNNNNGG 6 cut(s) 571, 630, 689, 1751, 1933, 2108
AjnI CCWGG 4 cut(s) 28, 617, 1744, 2105
AluBI AGCT 8 cut(s) 344, 374, 967, 1103, 1226, 1338, 1778, 2228
AluI AGCT 8 cut(s) 344, 374, 967, 1103, 1226, 1338, 1778, 2228
Alw26I GTCTC 3 cut(s) 326, 1020, 2073
AlwNI CAGNNNCTG 5 cut(s) 139, 1685, 1778, 2000, 2027
Aor51HI AGCGCT 1 cut(s) 93
AoxI GGCC 8 cut(s) 389, 621, 1176, 1314, 1535, 1660, 1764, 1887
ApaI GGGCCC 1 cut(s) 1318
ApeKI GCWGC 7 cut(s) 94, 116, 158, 893, 1100, 1790, 1823
ApoI RAATTY 6 cut(s) 544, 553, 605, 1385, 1756, 1900
AseI ATTAAT 1 cut(s) 1596
AspLEI GCGC 1 cut(s) 94
AspS9I GGNCC 9 cut(s) 389, 621, 1314, 1315, 1472, 1536, 1558, 1631, 1919
AsuNHI GCTAGC 3 cut(s) 1412, 2210, 2228
AvaII GGWCC 4 cut(s) 1472, 1558, 1631, 1919
BaeGI GKGCMC 1 cut(s) 1318
BamHI GGATCC 1 cut(s) 1195
BanII GRGCYC 1 cut(s) 1318
BauI CACGAG 1 cut(s) 1247
BbsI GAAGAC 1 cut(s) 245
BbvI GCAGC 7 cut(s) 81, 128, 170, 880, 1112, 1777, 1835
BccI CCATC 5 cut(s) 394, 576, 712, 1198, 2084
BceAI ACGGC 3 cut(s) 608, 2199, 2210
BciT130I CCWGG 4 cut(s) 30, 619, 1746, 2107
BciVI GTATCC 1 cut(s) 2184
BcoDI GTCTC 3 cut(s) 326, 1020, 2073
BfaI CTAG 5 cut(s) 336, 1413, 1797, 2211, 2229
BfmI CTRYAG 2 cut(s) 156, 2151
BfoI RGCGCY 1 cut(s) 95
BfuAI ACCTGC 1 cut(s) 2035
BfuI GTATCC 1 cut(s) 2184
BglII AGATCT 1 cut(s) 1405
BisI GCNGC 9 cut(s) 95, 117, 159, 565, 894, 1101, 1791, 1824, 2233
BlsI GCNGC 9 cut(s) 96, 118, 160, 566, 895, 1102, 1792, 1825, 2234
BmcAI AGTACT 1 cut(s) 1112
Bme1390I CCNGG 4 cut(s) 30, 619, 1746, 2107
Bme18I GGWCC 4 cut(s) 1472, 1558, 1631, 1919
BmgT120I GGNCC 9 cut(s) 389, 621, 1314, 1315, 1472, 1536, 1558, 1631, 1919
BmiI GGNNCC 3 cut(s) 1197, 1316, 1473
BmrFI CCNGG 4 cut(s) 30, 619, 1746, 2107
BmsI GCATC 7 cut(s) 202, 263, 520, 880, 933, 1111, 2170
BmtI GCTAGC 3 cut(s) 1416, 2214, 2232
BpiI GAAGAC 1 cut(s) 245
BpmI CTGGAG 2 cut(s) 1800, 2301
BsaBI GATNNNNATC 1 cut(s) 1710
BsaJI CCNNGG 6 cut(s) 42, 618, 979, 1733, 1745, 2106
BsaXI ACNNNNNCTCC 2 cut(s) 1017, 1047
Bsc4I CCNNNNNNNGG 6 cut(s) 571, 630, 689, 1751, 1933, 2108
Bse118I RCCGGY 2 cut(s) 234, 2300
Bse1I ACTGG 2 cut(s) 694, 1663
Bse3DI GCAATG 1 cut(s) 1176
Bse8I GATNNNNATC 1 cut(s) 1710
BseBI CCWGG 4 cut(s) 30, 619, 1746, 2107
BseDI CCNNGG 6 cut(s) 42, 618, 979, 1733, 1745, 2106
BseGI GGATG 8 cut(s) 28, 405, 468, 723, 779, 1942, 2071, 2076
BseJI GATNNNNATC 1 cut(s) 1710
BseLI CCNNNNNNNGG 6 cut(s) 571, 630, 689, 1751, 1933, 2108
BseMI GCAATG 1 cut(s) 1176
BseMII CTCAG 1 cut(s) 373
BseNI ACTGG 2 cut(s) 694, 1663
BseSI GKGCMC 1 cut(s) 1318
BseXI GCAGC 7 cut(s) 81, 128, 170, 880, 1112, 1777, 1835
BseYI CCCAGC 2 cut(s) 736, 1226
BsgI GTGCAG 1 cut(s) 1126
BshFI GGCC 8 cut(s) 391, 623, 1178, 1316, 1537, 1662, 1766, 1889
BsiSI CCGG 2 cut(s) 235, 2301
BslFI GGGAC 2 cut(s) 1485, 2011
BslI CCNNNNNNNGG 6 cut(s) 571, 630, 689, 1751, 1933, 2108
BsmAI GTCTC 3 cut(s) 326, 1020, 2073
BsmBI CGTCTC 1 cut(s) 1020
BsmFI GGGAC 2 cut(s) 1485, 2011
BsnI GGCC 8 cut(s) 391, 623, 1178, 1316, 1537, 1662, 1766, 1889
Bsp120I GGGCCC 1 cut(s) 1314
Bsp1286I GDGCHC 1 cut(s) 1318
Bsp19I CCATGG 1 cut(s) 42
BspACI CCGC 5 cut(s) 20, 475, 565, 637, 2233
BspANI GGCC 8 cut(s) 391, 623, 1178, 1316, 1537, 1662, 1766, 1889
BspCNI CTCAG 1 cut(s) 372
BspLI GGNNCC 3 cut(s) 1197, 1316, 1473
BspMAI CTGCAG 1 cut(s) 160
BspMI ACCTGC 1 cut(s) 2035
BspOI GCTAGC 3 cut(s) 1416, 2214, 2232
BspQI GCTCTTC 1 cut(s) 933
BsrBI CCGCTC 2 cut(s) 20, 637
BsrDI GCAATG 1 cut(s) 1176
BsrFI RCCGGY 2 cut(s) 234, 2300
BsrI ACTGG 2 cut(s) 694, 1663
BssAI RCCGGY 2 cut(s) 234, 2300
BssECI CCNNGG 6 cut(s) 42, 618, 979, 1733, 1745, 2106
BssNAI GTATAC 1 cut(s) 1258
BssSI CACGAG 1 cut(s) 1247
BssT1I CCWWGG 2 cut(s) 42, 1733
Bst1107I GTATAC 1 cut(s) 1258
Bst2BI CACGAG 1 cut(s) 1247
Bst2UI CCWGG 4 cut(s) 30, 619, 1746, 2107
Bst4CI ACNGT 8 cut(s) 145, 585, 614, 1031, 1062, 1239, 1774, 2155
Bst6I CTCTTC 4 cut(s) 324, 444, 933, 1461
BstAPI GCANNNNNTGC 1 cut(s) 194
BstDEI CTNAG 4 cut(s) 359, 947, 1625, 1894
BstDSI CCRYGG 2 cut(s) 42, 979
BstF5I GGATG 8 cut(s) 28, 405, 468, 723, 779, 1942, 2071, 2076
BstH2I RGCGCY 1 cut(s) 95
BstHHI GCGC 1 cut(s) 94
BstMAI GTCTC 3 cut(s) 326, 1020, 2073
BstMWI GCNNNNNNNGC 9 cut(s) 89, 100, 194, 380, 679, 923, 1175, 1668, 1895
BstNI CCWGG 4 cut(s) 30, 619, 1746, 2107
BstNSI RCATGY 2 cut(s) 872, 1420
BstSCI CCNGG 4 cut(s) 28, 617, 1744, 2105
BstSFI CTRYAG 2 cut(s) 156, 2151
BstSLI GKGCMC 1 cut(s) 1318
BstV1I GCAGC 7 cut(s) 81, 128, 170, 880, 1112, 1777, 1835
BstV2I GAAGAC 1 cut(s) 245
BstX2I RGATCY 5 cut(s) 1195, 1405, 1528, 1552, 2199
BstYI RGATCY 5 cut(s) 1195, 1405, 1528, 1552, 2199
BstZ17I GTATAC 1 cut(s) 1258
BsuI GTATCC 1 cut(s) 2184
BsuRI GGCC 8 cut(s) 391, 623, 1178, 1316, 1537, 1662, 1766, 1889
BtgI CCRYGG 2 cut(s) 42, 979
BtgZI GCGATG 3 cut(s) 286, 394, 875
BtsCI GGATG 8 cut(s) 28, 405, 468, 723, 779, 1942, 2071, 2076
BtsI GCAGTG 4 cut(s) 153, 719, 818, 2235
BtsIMutI CAGTG 7 cut(s) 69, 153, 619, 719, 818, 1686, 2235
BveI ACCTGC 1 cut(s) 2035
CaiI CAGNNNCTG 5 cut(s) 139, 1685, 1778, 2000, 2027
CfoI GCGC 1 cut(s) 94
Cfr10I RCCGGY 2 cut(s) 234, 2300
Cfr13I GGNCC 9 cut(s) 389, 621, 1314, 1315, 1472, 1536, 1558, 1631, 1919
CseI GACGC 1 cut(s) 372
Csp6I GTAC 4 cut(s) 406, 646, 1111, 2024
CspCI CAANNNNNGTGG 2 cut(s) 1863, 1898
CviAII CATG 5 cut(s) 43, 869, 1151, 1417, 1525
CviQI GTAC 4 cut(s) 406, 646, 1111, 2024
DdeI CTNAG 4 cut(s) 359, 947, 1625, 1894
DraI TTTAAA 1 cut(s) 420
Eam1104I CTCTTC 4 cut(s) 324, 444, 933, 1461
EarI CTCTTC 4 cut(s) 324, 444, 933, 1461
Eco130I CCWWGG 2 cut(s) 42, 1733
Eco24I GRGCYC 1 cut(s) 1318
Eco47I GGWCC 4 cut(s) 1472, 1558, 1631, 1919
Eco47III AGCGCT 1 cut(s) 93
Eco57I CTGAAG 2 cut(s) 1107, 2208
EcoO109I RGGNCCY 2 cut(s) 1315, 1472
EcoRII CCWGG 4 cut(s) 28, 617, 1744, 2105
EcoT14I CCWWGG 2 cut(s) 42, 1733
EcoT38I GRGCYC 1 cut(s) 1318
ErhI CCWWGG 2 cut(s) 42, 1733
Esp3I CGTCTC 1 cut(s) 1020
FaeI CATG 5 cut(s) 46, 872, 1154, 1420, 1528
FalI AAGNNNNNCTT 4 cut(s) 1434, 1466, 1566, 1598
FaqI GGGAC 2 cut(s) 1485, 2011
FatI CATG 5 cut(s) 42, 868, 1150, 1416, 1524
FauNDI CATATG 1 cut(s) 805
FblI GTMKAC 1 cut(s) 1257
Fnu4HI GCNGC 9 cut(s) 95, 117, 159, 565, 894, 1101, 1791, 1824, 2233
FokI GGATG 8 cut(s) 35, 412, 475, 730, 766, 1949, 2058, 2063
FriOI GRGCYC 1 cut(s) 1318
Fsp4HI GCNGC 9 cut(s) 95, 117, 159, 565, 894, 1101, 1791, 1824, 2233
FspBI CTAG 5 cut(s) 336, 1413, 1797, 2211, 2229
GlaI GCGC 1 cut(s) 93
GluI GCNGC 9 cut(s) 95, 117, 159, 565, 894, 1101, 1791, 1824, 2233
GsaI CCCAGC 2 cut(s) 740, 1230
GsuI CTGGAG 2 cut(s) 1800, 2301
HaeII RGCGCY 1 cut(s) 95
HaeIII GGCC 8 cut(s) 391, 623, 1178, 1316, 1537, 1662, 1766, 1889
HapII CCGG 2 cut(s) 235, 2301
HgaI GACGC 1 cut(s) 372
HhaI GCGC 1 cut(s) 94
Hin1II CATG 5 cut(s) 46, 872, 1154, 1420, 1528
Hin6I GCGC 1 cut(s) 92
HinP1I GCGC 1 cut(s) 92
HincII GTYRAC 3 cut(s) 652, 1036, 1617
HindII GTYRAC 3 cut(s) 652, 1036, 1617
HindIII AAGCTT 1 cut(s) 342
HinfI GANTC 6 cut(s) 136, 452, 754, 935, 974, 988
HpaI GTTAAC 1 cut(s) 1036
HpaII CCGG 2 cut(s) 235, 2301
Hpy166II GTNNAC 5 cut(s) 652, 1036, 1258, 1617, 1631
Hpy188I TCNGA 5 cut(s) 141, 293, 592, 912, 940
Hpy8I GTNNAC 5 cut(s) 652, 1036, 1258, 1617, 1631
HpyCH4III ACNGT 8 cut(s) 145, 585, 614, 1031, 1062, 1239, 1774, 2155
HpyCH4IV ACGT 1 cut(s) 648
HpyF10VI GCNNNNNNNGC 9 cut(s) 89, 100, 194, 380, 679, 923, 1175, 1668, 1895
HpyF3I CTNAG 4 cut(s) 359, 947, 1625, 1894
HpySE526I ACGT 1 cut(s) 648
Hsp92II CATG 5 cut(s) 46, 872, 1154, 1420, 1528
HspAI GCGC 1 cut(s) 92
KspAI GTTAAC 1 cut(s) 1036
LguI GCTCTTC 1 cut(s) 933
LmnI GCTCC 4 cut(s) 371, 634, 983, 2035
Lsp1109I GCAGC 7 cut(s) 81, 128, 170, 880, 1112, 1777, 1835
LweI GCATC 7 cut(s) 202, 263, 520, 880, 933, 1111, 2170
MaeI CTAG 5 cut(s) 336, 1413, 1797, 2211, 2229
MaeII ACGT 1 cut(s) 648
MaeIII GTNAC 5 cut(s) 426, 499, 1494, 1867, 2045
MbiI CCGCTC 2 cut(s) 20, 637
MboII GAAGA 9 cut(s) 245, 341, 461, 652, 716, 920, 983, 1478, 2028
MflI RGATCY 5 cut(s) 1195, 1405, 1528, 1552, 2199
MhlI GDGCHC 1 cut(s) 1318
MlyI GAGTC 2 cut(s) 461, 929
MmeI TCCRAC 4 cut(s) 349, 807, 1732, 1946
MnlI CCTC 7 cut(s) 40, 106, 178, 313, 1357, 1462, 1495
MseI TTAA 9 cut(s) 419, 609, 900, 1035, 1076, 1283, 1334, 1596, 1862
MslI CAYNNNNRTG 1 cut(s) 1155
MspI CCGG 2 cut(s) 235, 2301
MspR9I CCNGG 4 cut(s) 30, 619, 1746, 2107
MvaI CCWGG 4 cut(s) 30, 619, 1746, 2107
MwoI GCNNNNNNNGC 9 cut(s) 89, 100, 194, 380, 679, 923, 1175, 1668, 1895
NcoI CCATGG 1 cut(s) 42
NdeI CATATG 1 cut(s) 805
NheI GCTAGC 3 cut(s) 1412, 2210, 2228
NlaIII CATG 5 cut(s) 46, 872, 1154, 1420, 1528
NlaIV GGNNCC 3 cut(s) 1197, 1316, 1473
NmuCI GTSAC 1 cut(s) 2045
NspI RCATGY 2 cut(s) 872, 1420
PaeI GCATGC 1 cut(s) 872
PciSI GCTCTTC 1 cut(s) 933
PfeI GAWTC 4 cut(s) 136, 754, 974, 988
PflMI CCANNNNNTGG 1 cut(s) 689
PkrI GCNGC 9 cut(s) 96, 118, 160, 566, 895, 1102, 1792, 1825, 2234
PleI GAGTC 2 cut(s) 460, 929
PpsI GAGTC 2 cut(s) 460, 929
PpuMI RGGWCCY 1 cut(s) 1472
PshBI ATTAAT 1 cut(s) 1596
Psp5II RGGWCCY 1 cut(s) 1472
Psp6I CCWGG 4 cut(s) 28, 617, 1744, 2105
PspFI CCCAGC 2 cut(s) 736, 1226
PspGI CCWGG 4 cut(s) 28, 617, 1744, 2105
PspN4I GGNNCC 3 cut(s) 1197, 1316, 1473
PspOMI GGGCCC 1 cut(s) 1314
PspPI GGNCC 9 cut(s) 389, 621, 1314, 1315, 1472, 1536, 1558, 1631, 1919
PspPPI RGGWCCY 1 cut(s) 1472
PsrI GAACNNNNNNTAC 2 cut(s) 1767, 1799
PstI CTGCAG 1 cut(s) 160
PstNI CAGNNNCTG 5 cut(s) 139, 1685, 1778, 2000, 2027
PsuI RGATCY 5 cut(s) 1195, 1405, 1528, 1552, 2199
RsaI GTAC 4 cut(s) 407, 647, 1112, 2025
RsaNI GTAC 4 cut(s) 406, 646, 1111, 2024
RseI CAYNNNNRTG 1 cut(s) 1155
SapI GCTCTTC 1 cut(s) 933
SaqAI TTAA 9 cut(s) 419, 609, 900, 1035, 1076, 1283, 1334, 1596, 1862
SatI GCNGC 9 cut(s) 95, 117, 159, 565, 894, 1101, 1791, 1824, 2233
Sau96I GGNCC 9 cut(s) 389, 621, 1314, 1315, 1472, 1536, 1558, 1631, 1919
ScaI AGTACT 1 cut(s) 1112
SchI GAGTC 2 cut(s) 461, 929
ScrFI CCNGG 4 cut(s) 30, 619, 1746, 2107
SduI GDGCHC 1 cut(s) 1318
SfaNI GCATC 7 cut(s) 202, 263, 520, 880, 933, 1111, 2170
SfcI CTRYAG 2 cut(s) 156, 2151
SinI GGWCC 4 cut(s) 1472, 1558, 1631, 1919
SmiMI CAYNNNNRTG 1 cut(s) 1155
SphI GCATGC 1 cut(s) 872
SsiI CCGC 5 cut(s) 20, 475, 565, 637, 2233
SspI AATATT 4 cut(s) 167, 1309, 1594, 1860
SspMI CTAG 5 cut(s) 336, 1413, 1797, 2211, 2229
StyD4I CCNGG 4 cut(s) 28, 617, 1744, 2105
StyI CCWWGG 2 cut(s) 42, 1733
TaaI ACNGT 8 cut(s) 145, 585, 614, 1031, 1062, 1239, 1774, 2155
TaiI ACGT 1 cut(s) 651
TaqI TCGA 2 cut(s) 9, 1513
TatI WGTACW 2 cut(s) 405, 1110
TauI GCSGC 2 cut(s) 567, 2235
TfiI GAWTC 4 cut(s) 136, 754, 974, 988
Tru1I TTAA 9 cut(s) 419, 609, 900, 1035, 1076, 1283, 1334, 1596, 1862
Tru9I TTAA 9 cut(s) 419, 609, 900, 1035, 1076, 1283, 1334, 1596, 1862
TscAI CASTG 7 cut(s) 76, 160, 619, 719, 818, 1686, 2242
TseFI GTSAC 1 cut(s) 2045
TseI GCWGC 7 cut(s) 94, 116, 158, 893, 1100, 1790, 1823
Tsp45I GTSAC 1 cut(s) 2045
TspDTI ATGAA 9 cut(s) 102, 277, 555, 1467, 1479, 1513, 1665, 1869, 2160
TspGWI ACGGA 2 cut(s) 475, 2007
TspRI CASTG 7 cut(s) 76, 160, 619, 719, 818, 1686, 2242
Van91I CCANNNNNTGG 1 cut(s) 689
VpaK11BI GGWCC 4 cut(s) 1472, 1558, 1631, 1919
VspI ATTAAT 1 cut(s) 1596
XapI RAATTY 6 cut(s) 544, 553, 605, 1385, 1756, 1900
XceI RCATGY 2 cut(s) 872, 1420
XmiI GTMKAC 1 cut(s) 1257
XspI CTAG 5 cut(s) 336, 1413, 1797, 2211, 2229
ZrmI AGTACT 1 cut(s) 1112
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.