Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb2

Orthogroup ID

OG0000648

Physical Location & Seq

Genomic Coordinates Forward (+)

24082189 .. 24088029

Gene Structure 5841 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_2g31431.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2667 bp

ATGGAGCAGTTCAAAGGCCAACCCCGCCTCCCCAAATTCGCCGTCCCCAAACGCTACGACGTTACTCTCAAACCCGACCTCTCCGCCTGCAAGTTCGCCGGCTCCGTCGCCATCGACCTCGACATCGTCTCCGATACCACCTTCATCGTCCTCAATGCCGCCGACCTCGCCGTCGACGCCGCCTCCGTCTCTTTCACTCACAAAAACTCTTCCAAGGTTTTCAAGCCTTTGAAAGCTGAGACGTTTGAAGAAGATGGCATTTTGGTTTTGGAGTTTGGAGAGACGCTTCCGGCTGGGCTGGGAGTTTTGGCGATTCGGTTTGAAGGAATTTTGAATGACAAGATGAAGGGGTTCTATAGAAGTACGTATGAGCATAATGGTGAGAAGAAAAATATGGCAGTTACACAGTTTGAACCTGTTGATGCCAGGCGGTGCTTTCCATGCTGGGACGAACCTGCTTGCAAGGCTACATTCAAGATTACATTGGTGGGTGTTCCGTCTGAATTAGTAGCCCTTTCCAACATGCCAGTTGTTGAAGAAAAAGTGGATGGACAACTGAAGACCGTTTCATATGAGGAGACACCGGTTATGTCTACGTATTTAGTGGCTGTTGTTGTTGGATTGTTTGATTATGTAGAAGATCATACATCAGATGGAGTCAAAGTGCGAGTGTATTGTCAAGTTGGTAAAGCAAACCAAGGGAAATTTGCTTTGCATGTTGCTGTCAAGACTCTTGAATTGTACAAAGAATACTTTGCTGTGCCATATCCTTTGCCCAAATTGGATATGGTTGCTATCCCTGATTTTTCTGCTGGGGCCATGGAGAATTATGGTTTAGTTACATACCGTGAAACAGCTTTGCTCTTTGATGAACAGCATTCTGCAGCTGCCAACAAGCAAAGGGTTGCAACTGTTGTGGCACATGAATTAGCCCACCAGTGGTTTGGAAATCTTGTAACGATGGAATGGTGGACACATTTATGGCTGAATGAGGGATTTGCAACATGGGTGAGCTATTTAGCTGCTGACAGCCTATTTCCTGAATGGAAAATATGGACTCAGTTTCTTGATGAATCTACTGAAGGTCTTAGGCTGGATGGGCTTGAAGAATCTCACCCTATCGAGGTGGAGATAAATCATGCTTGTGAGGTGGATGAAATATTTGATGCTATAAGCTATAGGAAAGGTGCTTCTGTTATTCGGATGCTACAAAGCTATCTTGGTGCTGAACCCTTTCAGAGATCACTTGCTTCATATATAAAAAAGCATGCCTACTCGAATGCTTATACAGAAGATCTATGGGCTGCCCTGGAGGAGGGATCAGGTGAACCCGTGAACAAGCTAATGAATTCATGGACAAAGCAACAAGGTTACCCGGTTGTCTCTGTCAAGGTTAAAGATCAGAAATTGGAGTTTGAACAGACACAATTCTTGTCAAGTGGTAATGAAGGCACTGGGCAATGGATCGTGCCGATAACATTATGCTGTGGCTCATATGATGTACGCAAAAGTTTCCTACTACAAACAAAGTCCGAAAGTCTGGACATAAAGGAATTTCTAGGTTGCTCAGTAGCGGGAAGCGCATGCAATAAAGACAATGGGCAATGTGGTTGGATAAAGCTCAATGTGGATCGGGCAGGTTTCTATAGGGTGAAATATGATGATAACCTTGCAGCTCAACTAAGAAACGCAATAGAGAAGAAAGATTTGTCTGCAACTGACAGATATGGCATCTTGGATGATTCAGCTGCCCTTACTATGGCTCGCCAGCAGTCTTTTGTCTCATTGCTTACCTTGTTGGGTGCTTACAGAGAGGAACTTGACTACACAGTGCTGTCAAATCTGATTACTGTAAGCTATAAACTGACAAGAATTGCTGCTGATGCTGTACCCGAGCTAGTGGGCCTCCTTAATCAGTTCTTTATTGGCCTTCTCCAGTACCCTGCAGAGAAGCTTGGTTGGCAACCAAAACCGGGTGAGAGCCATTTAGATGCAATGTTGAGAGGAGAACTTTTGACTGCACTTGCTTTATTTGGACATGATCTGACAATTGATGAAGCAATCAGGCGGTTTAGTGCCTACTTAGATGACAGAAATACACCACTCCTTCCTCCTGACATAAGAAGGGCAGCATATGTGGCTGTAATGCAAAGAGTAACTGCATCTAACCGATCGGGATATGAATCTCTTCTTAAAGTTTACAGAGAGACAGATCTAAGCCAGGAGAAGACCCGCATTTTAGGTTCGTTAGCATCGTGTCCAGATCTTGACATAATACTGGAAGTTCTCAACTTTTTGTTGACTCCAGAGGTCCGTAGTCAGGATGCTGTCTTTGGACTAGCTGTTGGTAGTAAAGGACGAGAAACAGCTTGGACGTGGCTGAAGAATAACTGGGAGCACATCTCAAAGACATGGGGTTCTGGATTTTTGATTACTCGCTTTGTCAGTGCGACTGTCTCACATTTTGCGTCCTTAGACAAGGTAAAGGAAGTAGAGGAGTTCTTCAAAGCGCATCCCAACCCCGCCATAACTAGAACCCTGAAGCAGAGCATCGAGCGGGTACAGATCAACGCCAAGTGGGTTGAGAGCATCCAGGGCGAGAAGAACCTCTCTGATGCAGTGACAGAGTTGGCATACAGGAAATACGAGATTGCACGTTGGATTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001666 GO:0003674 GO:0003824 GO:0004177 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0006508 GO:0006518 GO:0006807 GO:0006810 GO:0006950 GO:0008144 GO:0008150 GO:0008152 GO:0008233 GO:0008235 GO:0008237 GO:0008238 GO:0008270 GO:0009056 GO:0009628 GO:0009914 GO:0009926 GO:0009987 GO:0010013 GO:0010817 GO:0016020 GO:0016787 GO:0019538 GO:0031090 GO:0031406 GO:0033218 GO:0033293 GO:0033554 GO:0034641 GO:0036094 GO:0036293 GO:0036294 GO:0042221 GO:0042277 GO:0043167 GO:0043168 GO:0043169 GO:0043170 GO:0043171 GO:0043177 GO:0043226 GO:0043227 GO:0043603 GO:0044237 GO:0044238 GO:0044248 GO:0044422 GO:0044424 GO:0044444 GO:0044464 GO:0046872 GO:0046914 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0060918 GO:0065007 GO:0065008 GO:0070006 GO:0070011 GO:0070482 GO:0070887 GO:0071453 GO:0071456 GO:0071704 GO:0071944 GO:0097159 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ERAP1_C Peptidase_M1

Protein Analysis

889

Amino Acids

99.65

Weight (kDa)

5.38

Isoelectric Point (pI)

31.53

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Peptidase_M1_N	PF17900	15 - 201	4.8e-50	Peptidase M1 N-terminal domain
Peptidase_M1	PF01433	236 - 452	3.3e-89	Peptidase family M1 domain
ERAP1_C	PF11838	538 - 855	7.1e-80	ERAP1-like C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000648)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G33090
fragaria_vesca	FvH4_2g31431 FvH4_2g31440 FvH4_6g34250 FvH4_6g34262 FvH4_6g34263
malus_domestica	MD08G1066400.v1.1 MD08G1066500.v1.1 MD08G1067400.v1.1 MD09G1070300.v1.1 MD09G1187200.v1.1 MD10G1090900.v1.1 MD15G1054400.v1.1 MD17G1171400.v1.1
prunus_persica	Prupe.1G407900_v2.0.a1 Prupe.1G408000_v2.0.a1 Prupe.1G408000_v2.0.a1 Prupe.1G408000_v2.0.a1 Prupe.1G457300_v2.0.a1 Prupe.3G044500_v2.0.a1 Prupe.3G044500_v2.0.a1
pyrus_communis	pycom08g05520 pycom08g05550 pycom08g05560 pycom08g05590 pycom09g10370 pycom09g10380 pycom10g07440 pycom10g07460 pycom15g05130 pycom15g05150 pycom17g16900
rosa_chinensis	RchiOBHm_Chr2g0144571 RchiOBHm_Chr2g0144611 RchiOBHm_Chr4g0390591 RchiOBHm_Chr6g0311371 RchiOBHm_Chr6g0311381
rosa_laevigata	RLG00000009010 RLG00000009289 RLG00000010411 RLG00000010412 RLG00000020090 RLG00000020092 RLG00000036974
rosa_multiflora	Rmu_co8212940.1_g000001 Rmu_sc0005789.1_g000001 Rmu_sc0008536.1_g000010 Rmu_sc0008536.1_g000011 Rmu_sc0009300.1_g000002
rosa_roxburghii	Rroxscaffold_1G00056400 Rroxscaffold_2G00084720 Rroxscaffold_2G00101200 Rroxscaffold_7G00157670 Rroxscaffold_7G00157680
rosa_rugosa	Rorug02G0387900 Rorug02G0388000 Rorug02G0388100 Rorug06G0388300 Rorug06G0388400
rosa_samantha	Rh2AG440000 Rh2AG440100 Rh2BG450000 Rh2BG450300 Rh2BG450500 Rh2CG427000 Rh2CG427200 Rh2DG459900 Rh2DG460300 Rh2DG460500 Rh6AG502600 Rh6AG502700 Rh6BG513300 Rh6CG519100 Rh6CG519200
rosa_wichuraiana	Rw2G036000 Rw6G043770 Rw6G043780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	170
Acc36I	ACCTGC	2 cut(s)	463, 1628
AccBSI	CCGCTC	1 cut(s)	2557
AccI	GTMKAC	2 cut(s)	174, 593
AclWI	GGATC	3 cut(s)	1327, 1472, 1638
AcsI	RAATTY	5 cut(s)	35, 327, 704, 1348, 1553
AcuI	CTGAAG	4 cut(s)	578, 1101, 2402, 2561
AcyI	GRCGYC	1 cut(s)	177
AfaI	GTAC	6 cut(s)	364, 743, 1503, 1890, 1940, 2562
AfiI	CCNNNNNNNGG	6 cut(s)	939, 1123, 1315, 1759, 1973, 2320
AgeI	ACCGGT	1 cut(s)	583
AjiI	CACGTC	1 cut(s)	2376
AjnI	CCWGG	4 cut(s)	425, 1308, 2220, 2592
Alw21I	GWGCWC	1 cut(s)	2400
Alw26I	GTCTC	9 cut(s)	133, 193, 233, 275, 572, 1387, 1786, 2201, 2461
AlwI	GGATC	3 cut(s)	1327, 1472, 1638
Ama87I	CYCGRG	1 cut(s)	1892
AoxI	GGCC	4 cut(s)	16, 816, 1903, 1927
ApeKI	GCWGC	8 cut(s)	884, 887, 1022, 1304, 1673, 1748, 1877, 2129
ApoI	RAATTY	5 cut(s)	35, 327, 704, 1348, 1553
ArsI	GACNNNNNNTTYG	2 cut(s)	27, 59
AsiGI	ACCGGT	1 cut(s)	583
Asp700I	GAANNNNTTC	3 cut(s)	350, 1233, 2187
AspLEI	GCGC	2 cut(s)	1583, 2512
AspS9I	GGNCC	3 cut(s)	816, 1903, 2311
AsuC2I	CCSGG	2 cut(s)	1376, 1974
AsuHPI	GGTGA	6 cut(s)	392, 1021, 1106, 1337, 1663, 1988
AvaI	CYCGRG	1 cut(s)	1892
AvaII	GGWCC	1 cut(s)	2311
BbsI	GAAGAC	2 cut(s)	566, 2234
Bbv12I	GWGCWC	1 cut(s)	2400
BbvI	GCAGC	8 cut(s)	874, 896, 1009, 1291, 1685, 1735, 1864, 2141
BccI	CCATC	6 cut(s)	119, 248, 542, 647, 955, 1091
BceAI	ACGGC	2 cut(s)	26, 155
BciT130I	CCWGG	4 cut(s)	427, 1310, 2222, 2594
BcnI	CCSGG	2 cut(s)	1376, 1974
BcoDI	GTCTC	9 cut(s)	133, 193, 233, 275, 572, 1387, 1786, 2201, 2461
BfaI	CTAG	4 cut(s)	1559, 1898, 2339, 2532
BfmI	CTRYAG	5 cut(s)	355, 882, 1177, 1645, 1944
BfuAI	ACCTGC	2 cut(s)	463, 1628
BglII	AGATCT	3 cut(s)	1294, 2212, 2263
Bme1390I	CCNGG	6 cut(s)	427, 1310, 1376, 1974, 2222, 2594
Bme18I	GGWCC	1 cut(s)	2311
BmeT110I	CYCGRG	1 cut(s)	1892
BmgBI	CACGTC	1 cut(s)	2376
BmgT120I	GGNCC	3 cut(s)	816, 1903, 2311
BmiI	GGNNCC	2 cut(s)	103, 817
BmrFI	CCNGG	6 cut(s)	427, 1310, 1376, 1974, 2222, 2594
BmrI	ACTGGG	2 cut(s)	1464, 2401
BmuI	ACTGGG	2 cut(s)	1464, 2401
BpiI	GAAGAC	2 cut(s)	566, 2234
BplI	GAGNNNNNCTC	2 cut(s)	2387, 2419
BpmI	CTGGAG	3 cut(s)	1331, 1919, 2289
BpuMI	CCSGG	2 cut(s)	1376, 1974
BsaAI	YACGTR	2 cut(s)	366, 597
BsaBI	GATNNNNATC	1 cut(s)	2182
BsaHI	GRCGYC	1 cut(s)	177
BsaJI	CCNNGG	5 cut(s)	213, 697, 819, 1308, 2593
BsaWI	WCCGGW	1 cut(s)	583
BsaXI	ACNNNNNCTCC	8 cut(s)	12, 42, 113, 143, 167, 197, 648, 678
Bsc4I	CCNNNNNNNGG	6 cut(s)	939, 1123, 1315, 1759, 1973, 2320
Bse118I	RCCGGY	2 cut(s)	98, 583
Bse1I	ACTGG	6 cut(s)	527, 937, 1459, 1936, 2283, 2396
Bse3DI	GCAATG	4 cut(s)	1466, 1610, 1784, 2001
Bse8I	GATNNNNATC	1 cut(s)	2182
BseBI	CCWGG	4 cut(s)	427, 1310, 2222, 2594
BseDI	CCNNGG	5 cut(s)	213, 697, 819, 1308, 2593
BseGI	GGATG	8 cut(s)	553, 1102, 1159, 1209, 1744, 2329, 2512, 2589
BseJI	GATNNNNATC	1 cut(s)	2182
BseLI	CCNNNNNNNGG	6 cut(s)	939, 1123, 1315, 1759, 1973, 2320
BseMI	GCAATG	4 cut(s)	1466, 1610, 1784, 2001
BseMII	CTCAG	3 cut(s)	228, 1073, 1581
BseNI	ACTGG	6 cut(s)	527, 937, 1459, 1936, 2283, 2396
BseRI	GAGGAG	4 cut(s)	590, 1328, 2019, 2510
BseXI	GCAGC	8 cut(s)	874, 896, 1009, 1291, 1685, 1735, 1864, 2141
BseYI	CCCAGC	4 cut(s)	293, 298, 444, 812
BsgI	GTGCAG	1 cut(s)	2004
Bsh1285I	CGRYCG	1 cut(s)	2174
BshFI	GGCC	4 cut(s)	18, 818, 1905, 1929
BshTI	ACCGGT	1 cut(s)	583
BsiEI	CGRYCG	1 cut(s)	2174
BsiHKAI	GWGCWC	1 cut(s)	2400
BsiHKCI	CYCGRG	1 cut(s)	1892
BsiSI	CCGG	5 cut(s)	99, 290, 584, 1376, 1973
BslFI	GGGAC	2 cut(s)	29, 461
BslI	CCNNNNNNNGG	6 cut(s)	939, 1123, 1315, 1759, 1973, 2320
BsmAI	GTCTC	9 cut(s)	133, 193, 233, 275, 572, 1387, 1786, 2201, 2461
BsmBI	CGTCTC	4 cut(s)	133, 193, 233, 275
BsmFI	GGGAC	2 cut(s)	29, 461
BsmI	GAATGC	2 cut(s)	877, 1285
BsnI	GGCC	4 cut(s)	18, 818, 1905, 1929
BsoBI	CYCGRG	1 cut(s)	1892
Bsp1286I	GDGCHC	1 cut(s)	2400
Bsp1407I	TGTACA	1 cut(s)	741
Bsp19I	CCATGG	1 cut(s)	819
BspANI	GGCC	4 cut(s)	18, 818, 1905, 1929
BspCNI	CTCAG	3 cut(s)	229, 1072, 1580
BspLI	GGNNCC	2 cut(s)	103, 817
BspMAI	CTGCAG	2 cut(s)	886, 1948
BspMI	ACCTGC	2 cut(s)	463, 1628
BspPI	GGATC	3 cut(s)	1327, 1472, 1638
BsrBI	CCGCTC	1 cut(s)	2557
BsrDI	GCAATG	4 cut(s)	1466, 1610, 1784, 2001
BsrFI	RCCGGY	2 cut(s)	98, 583
BsrGI	TGTACA	1 cut(s)	741
BsrI	ACTGG	6 cut(s)	527, 937, 1459, 1936, 2283, 2396
BssAI	RCCGGY	2 cut(s)	98, 583
BssECI	CCNNGG	5 cut(s)	213, 697, 819, 1308, 2593
BssNI	GRCGYC	1 cut(s)	177
BssT1I	CCWWGG	3 cut(s)	213, 697, 819
Bst2UI	CCWGG	4 cut(s)	427, 1310, 2222, 2594
Bst4CI	ACNGT	7 cut(s)	408, 565, 848, 913, 1831, 1852, 2455
Bst6I	CTCTTC	2 cut(s)	214, 2193
BstACI	GRCGYC	1 cut(s)	177
BstAUI	TGTACA	1 cut(s)	741
BstBAI	YACGTR	2 cut(s)	366, 597
BstC8I	GCNNGC	7 cut(s)	88, 100, 460, 1269, 1585, 1765, 1769
BstDEI	CTNAG	8 cut(s)	237, 1059, 1088, 1567, 1682, 2083, 2216, 2473
BstDSI	CCRYGG	1 cut(s)	819
BstEII	GGTNACC	1 cut(s)	1370
BstENI	CCTNNNNNAGG	1 cut(s)	1313
BstF5I	GGATG	8 cut(s)	553, 1102, 1159, 1209, 1744, 2329, 2512, 2589
BstHHI	GCGC	2 cut(s)	1583, 2512
BstMAI	GTCTC	9 cut(s)	133, 193, 233, 275, 572, 1387, 1786, 2201, 2461
BstMCI	CGRYCG	1 cut(s)	2174
BstNI	CCWGG	4 cut(s)	427, 1310, 2222, 2594
BstNSI	RCATGY	4 cut(s)	526, 719, 1271, 1587
BstPI	GGTNACC	1 cut(s)	1370
BstSCI	CCNGG	6 cut(s)	425, 1308, 1374, 1972, 2220, 2592
BstSFI	CTRYAG	5 cut(s)	355, 882, 1177, 1645, 1944
BstSNI	TACGTA	2 cut(s)	366, 597
BstV1I	GCAGC	8 cut(s)	874, 896, 1009, 1291, 1685, 1735, 1864, 2141
BstV2I	GAAGAC	2 cut(s)	566, 2234
BstX2I	RGATCY	3 cut(s)	1294, 2212, 2263
BstXI	CCANNNNNNTGG	1 cut(s)	944
BstYI	RGATCY	3 cut(s)	1294, 2212, 2263
BsuRI	GGCC	4 cut(s)	18, 818, 1905, 1929
BtgI	CCRYGG	1 cut(s)	819
BtrI	CACGTC	1 cut(s)	2376
BtsCI	GGATG	8 cut(s)	553, 1102, 1159, 1209, 1744, 2329, 2512, 2589
BtsI	GCAGTG	1 cut(s)	2625
BtsIMutI	CAGTG	5 cut(s)	944, 1452, 1836, 2452, 2625
BveI	ACCTGC	2 cut(s)	463, 1628
Cac8I	GCNNGC	7 cut(s)	88, 100, 460, 1269, 1585, 1765, 1769
CfoI	GCGC	2 cut(s)	1583, 2512
Cfr10I	RCCGGY	2 cut(s)	98, 583
Cfr13I	GGNCC	3 cut(s)	816, 1903, 2311
CseI	GACGC	3 cut(s)	185, 292, 2457
Csp6I	GTAC	6 cut(s)	363, 742, 1502, 1889, 1939, 2561
CspAI	ACCGGT	1 cut(s)	583
CspCI	CAANNNNNGTGG	2 cut(s)	897, 932
CviQI	GTAC	6 cut(s)	363, 742, 1502, 1889, 1939, 2561
DdeI	CTNAG	8 cut(s)	237, 1059, 1088, 1567, 1682, 2083, 2216, 2473
DrdI	GACNNNNNNGTC	1 cut(s)	170
DseDI	GACNNNNNNGTC	1 cut(s)	170
Eam1104I	CTCTTC	2 cut(s)	214, 2193
EarI	CTCTTC	2 cut(s)	214, 2193
EciI	GGCGGA	1 cut(s)	73
Eco105I	TACGTA	2 cut(s)	366, 597
Eco130I	CCWWGG	3 cut(s)	213, 697, 819
Eco47I	GGWCC	1 cut(s)	2311
Eco57I	CTGAAG	4 cut(s)	578, 1101, 2402, 2561
Eco88I	CYCGRG	1 cut(s)	1892
Eco91I	GGTNACC	1 cut(s)	1370
EcoNI	CCTNNNNNAGG	1 cut(s)	1313
EcoO65I	GGTNACC	1 cut(s)	1370
EcoRI	GAATTC	1 cut(s)	1348
EcoRII	CCWGG	4 cut(s)	425, 1308, 2220, 2592
EcoT14I	CCWWGG	3 cut(s)	213, 697, 819
ErhI	CCWWGG	3 cut(s)	213, 697, 819
Esp3I	CGTCTC	4 cut(s)	133, 193, 233, 275
FaqI	GGGAC	2 cut(s)	29, 461
FauI	CCCGC	5 cut(s)	32, 1567, 2240, 2530, 2550
FauNDI	CATATG	3 cut(s)	571, 1495, 2134
FblI	GTMKAC	2 cut(s)	174, 593
FokI	GGATG	8 cut(s)	560, 1109, 1166, 1216, 1751, 2336, 2499, 2576
FspBI	CTAG	4 cut(s)	1559, 1898, 2339, 2532
GlaI	GCGC	2 cut(s)	1582, 2511
GsaI	CCCAGC	4 cut(s)	297, 302, 448, 816
GsuI	CTGGAG	3 cut(s)	1331, 1919, 2289
HaeIII	GGCC	4 cut(s)	18, 818, 1905, 1929
HapII	CCGG	5 cut(s)	99, 290, 584, 1376, 1973
HgaI	GACGC	3 cut(s)	185, 292, 2457
HhaI	GCGC	2 cut(s)	1583, 2512
Hin1I	GRCGYC	1 cut(s)	177
Hin6I	GCGC	2 cut(s)	1581, 2510
HinP1I	GCGC	2 cut(s)	1581, 2510
HincII	GTYRAC	2 cut(s)	175, 2301
HindII	GTYRAC	2 cut(s)	175, 2301
HindIII	AAGCTT	1 cut(s)	1952
HinfI	GANTC	9 cut(s)	313, 657, 730, 1057, 1073, 1109, 1742, 2183, 2302
HpaII	CCGG	5 cut(s)	99, 290, 584, 1376, 1973
HphI	GGTGA	6 cut(s)	392, 1021, 1106, 1337, 1663, 1988
Hpy166II	GTNNAC	7 cut(s)	175, 594, 972, 1328, 1336, 2200, 2301
Hpy8I	GTNNAC	7 cut(s)	175, 594, 972, 1328, 1336, 2200, 2301
Hpy99I	CGWCG	4 cut(s)	62, 110, 176, 179
HpyAV	CCTTC	8 cut(s)	151, 317, 340, 1076, 1442, 1940, 2117, 2118
HpyCH4III	ACNGT	7 cut(s)	408, 565, 848, 913, 1831, 1852, 2455
HpyCH4IV	ACGT	6 cut(s)	60, 242, 365, 596, 2375, 2656
HpyF3I	CTNAG	8 cut(s)	237, 1059, 1088, 1567, 1682, 2083, 2216, 2473
HpySE526I	ACGT	6 cut(s)	60, 242, 365, 596, 2375, 2656
Hsp92I	GRCGYC	1 cut(s)	177
HspAI	GCGC	2 cut(s)	1581, 2510
KroI	GCCGGC	1 cut(s)	98
KroNI	GCCGGC	1 cut(s)	100
LmnI	GCTCC	3 cut(s)	4, 107, 2395
Lsp1109I	GCAGC	8 cut(s)	874, 896, 1009, 1291, 1685, 1735, 1864, 2141
MaeI	CTAG	4 cut(s)	1559, 1898, 2339, 2532
MaeII	ACGT	6 cut(s)	60, 242, 365, 596, 2375, 2656
MaeIII	GTNAC	7 cut(s)	61, 400, 838, 955, 1370, 2155, 2620
MbiI	CCGCTC	1 cut(s)	2557
MfeI	CAATTG	1 cut(s)	2049
MflI	RGATCY	3 cut(s)	1294, 2212, 2263
MhlI	GDGCHC	1 cut(s)	2400
MlyI	GAGTC	4 cut(s)	666, 724, 1051, 2296
MmeI	TCCRAC	4 cut(s)	543, 598, 1592, 2639
MroNI	GCCGGC	1 cut(s)	98
MroXI	GAANNNNTTC	3 cut(s)	350, 1233, 2187
MseI	TTAA	3 cut(s)	1395, 1911, 2193
MslI	CAYNNNNRTG	4 cut(s)	378, 979, 1143, 1989
MspA1I	CMGCKG	2 cut(s)	887, 1748
MspI	CCGG	5 cut(s)	99, 290, 584, 1376, 1973
MspR9I	CCNGG	6 cut(s)	427, 1310, 1376, 1974, 2222, 2594
MunI	CAATTG	1 cut(s)	2049
Mva1269I	GAATGC	2 cut(s)	877, 1285
MvaI	CCWGG	4 cut(s)	427, 1310, 2222, 2594
NaeI	GCCGGC	1 cut(s)	100
NciI	CCSGG	2 cut(s)	1376, 1974
NcoI	CCATGG	1 cut(s)	819
NdeI	CATATG	3 cut(s)	571, 1495, 2134
NgoMIV	GCCGGC	1 cut(s)	98
NlaIV	GGNNCC	2 cut(s)	103, 817
NmuCI	GTSAC	1 cut(s)	2620
NspI	RCATGY	4 cut(s)	526, 719, 1271, 1587
PaeI	GCATGC	2 cut(s)	1271, 1587
PcsI	WCGNNNNNNNCGW	3 cut(s)	102, 183, 2252
PctI	GAATGC	2 cut(s)	877, 1285
PdiI	GCCGGC	1 cut(s)	100
PdmI	GAANNNNTTC	3 cut(s)	350, 1233, 2187
PfeI	GAWTC	5 cut(s)	313, 1073, 1109, 1742, 2183
PflFI	GACNNNGTC	1 cut(s)	125
PinAI	ACCGGT	1 cut(s)	583
Ple19I	CGATCG	1 cut(s)	2174
PleI	GAGTC	4 cut(s)	665, 724, 1051, 2296
PpsI	GAGTC	4 cut(s)	665, 724, 1051, 2296
Ppu21I	YACGTR	2 cut(s)	366, 597
Psp6I	CCWGG	4 cut(s)	425, 1308, 2220, 2592
PspEI	GGTNACC	1 cut(s)	1370
PspFI	CCCAGC	4 cut(s)	293, 298, 444, 812
PspGI	CCWGG	4 cut(s)	425, 1308, 2220, 2592
PspN4I	GGNNCC	2 cut(s)	103, 817
PspPI	GGNCC	3 cut(s)	816, 1903, 2311
PstI	CTGCAG	2 cut(s)	886, 1948
PsuI	RGATCY	3 cut(s)	1294, 2212, 2263
PsyI	GACNNNGTC	1 cut(s)	125
PvuI	CGATCG	1 cut(s)	2174
PvuII	CAGCTG	2 cut(s)	887, 1748
RsaI	GTAC	6 cut(s)	364, 743, 1503, 1890, 1940, 2562
RsaNI	GTAC	6 cut(s)	363, 742, 1502, 1889, 1939, 2561
RseI	CAYNNNNRTG	4 cut(s)	378, 979, 1143, 1989
SalI	GTCGAC	1 cut(s)	173
SaqAI	TTAA	3 cut(s)	1395, 1911, 2193
Sau96I	GGNCC	3 cut(s)	816, 1903, 2311
SchI	GAGTC	4 cut(s)	666, 724, 1051, 2296
ScrFI	CCNGG	6 cut(s)	427, 1310, 1376, 1974, 2222, 2594
SduI	GDGCHC	1 cut(s)	2400
SfcI	CTRYAG	5 cut(s)	355, 882, 1177, 1645, 1944
SgrDI	CGTCGACG	1 cut(s)	173
SinI	GGWCC	1 cut(s)	2311
SmiMI	CAYNNNNRTG	4 cut(s)	378, 979, 1143, 1989
SnaBI	TACGTA	2 cut(s)	366, 597
SphI	GCATGC	2 cut(s)	1271, 1587
SspI	AATATT	1 cut(s)	1161
SspMI	CTAG	4 cut(s)	1559, 1898, 2339, 2532
StyD4I	CCNGG	6 cut(s)	425, 1308, 1374, 1972, 2220, 2592
StyI	CCWWGG	3 cut(s)	213, 697, 819
TaaI	ACNGT	7 cut(s)	408, 565, 848, 913, 1831, 1852, 2455
TaiI	ACGT	6 cut(s)	63, 245, 368, 599, 2378, 2659
TaqI	TCGA	6 cut(s)	114, 120, 174, 1122, 1277, 2553
TatI	WGTACW	1 cut(s)	741
TauI	GCSGC	2 cut(s)	161, 182
TfiI	GAWTC	5 cut(s)	313, 1073, 1109, 1742, 2183
Tru1I	TTAA	3 cut(s)	1395, 1911, 2193
Tru9I	TTAA	3 cut(s)	1395, 1911, 2193
TscAI	CASTG	5 cut(s)	944, 1459, 1836, 2452, 2625
TseFI	GTSAC	1 cut(s)	2620
TseI	GCWGC	8 cut(s)	884, 887, 1022, 1304, 1673, 1748, 1877, 2129
Tsp45I	GTSAC	1 cut(s)	2620
TspGWI	ACGGA	4 cut(s)	94, 175, 486, 2303
TspRI	CASTG	5 cut(s)	944, 1459, 1836, 2452, 2625
Tth111I	GACNNNGTC	1 cut(s)	125
VpaK11BI	GGWCC	1 cut(s)	2311
XagI	CCTNNNNNAGG	1 cut(s)	1313
XapI	RAATTY	5 cut(s)	35, 327, 704, 1348, 1553
XceI	RCATGY	4 cut(s)	526, 719, 1271, 1587
XcmI	CCANNNNNNNNNTGG	2 cut(s)	784, 941
XmiI	GTMKAC	2 cut(s)	174, 593
XmnI	GAANNNNTTC	3 cut(s)	350, 1233, 2187
XspI	CTAG	4 cut(s)	1559, 1898, 2339, 2532

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.