Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0000648

Physical Location & Seq

Genomic Coordinates Reverse (-)

27029939 .. 27035081

Gene Structure 5143 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g34250.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2655 bp

ATGGAACAGAAGCAAAGCATAGAGCAGTTCAAAGGACAAGCAAGGCTACCGAGTTTCGCAATCCCAAAACACTATGATCTTCATCTCAAACTTGATCTCTCTGCCTGCACCTTCTCCGGCACCGTGCAGATCAACCTTAGCATCGTTGAAGAGACCAAATTTCTTGTCTTGAACGCTCTTGAACTTGATGTTCATCAAGTTTGGTTCACCAACTCTCACGGCCAAAAGTACCACCCCTGCGATGTTGTTTTGGATGGAGACGATGAATTTCTTGTTTTGGTCTTTGATAAAGCACTTGGTATTAGTGAGGGAGTCGTGGGGGTTGAGTTTTCTGCAGTCCTTAATGCGCACTTGACGGGGTTATATAAATGTGCTTATTTGGATGGAGGAGAGAAAAAGAATATGGCTGTTACTCAATTTGAAGCTGTGGATGCGAGGCGATGCTTTCCATGTTGGGATGAACCTGCTCTCAAGGCCACCTTCAAGATAGCATTAGATGTACCATCAGAGCTGACAGCTTTGTCCAATATGCCAAGTACAAATGAAAAGTTTGATGGAGATGTTAAGACTGTTTATTTTGAGGAATCTCCAATCATGTCAACTTATTTGGTGGCTGTTGTTGCTGGCCTGTTTGATTATATTGAAGATACAACATCTGATGGGGTAAAGGTTCGTGCATATTGCCCTGTTGGGAAGAGTGATAAGGGGGAGTTTGCTTTAAATCTTGCCGTTAAGACCCTTGATCTGTTCTCCAAATACTTCTCAACCCCTTACTCCCTTCCCAAACTTGATATGGTTGCGGTTCCTGAATTTTCTGGTGGGGCCATGGAGAATTATGGTTTGATCACATACCGTGAAAGTGAACTCCTTTTTGATCCTTTGCACACCACAGCAGCAAGGAAGCAGAGAATGGCGATTGTTGTATCACATGAAGTAGCACATCAGTGGTTTGGCAATCTGGTAACCATGGAATGGTGGACTGATTTATGGCTTAATGAAGGATTTGCAACATGGATAAGCTATATGGCCACTGATATTTTGTTTCCTGAGTGGAAAGTTTGGTCTCAATTTCTACAACAGACTACTGGTGGCTTAGTTATGGATGCCCTGGAACAATCACATCCAATACAGGTGGAGGTAAACCATGCACGTTCAGTTCTTGAAATATTTGATGCCATCAGCTATGAAAAGGGATCTGCTGTCATACGAATGCTGCAGGCTTATCTTGGTGATGACATATTCCAGAAATCGTTAAGTTCCTATATGAAAAGATTCTCTGGAAAGAATGCTAAGACAGAAGATCTATGGAGTGTTATTTCAGAGGAATCTGGTGTCAAAATCAGTGAAATGATGGATGATTGGACTAAGAAGCAAGGATATCCTGTGATCTCTGTCAAAGCAAAGGATCATATTTTGGAATTTGAGCAGGCACAGTTTCTATCAGCAGGTTTGCTTGGTGATGGTGAGTGGATTGTTCCAATAACTATTTCATTGGGTTCATACGAGAGACGCAAGAAATTCCTTTTGGAAACAAAGTCCAGTGAAGTGGACGTGTCAGATCTTGTTAGCTCCTTCCATACCAAGTTAAAGAATAAAGAGATATGCGATGAACAACTGTGGGTCAAGGTCAATGTTGAGCAGAGTGGTTTCTATAGAGTAAAGTATGAAGATAAGCTAGCAGCTCGACTTAGGAAGGCTATTGAGCATAATAACTTGGAAGCAACAGACAAATTTGGCATTCTGGATGATTCACATGCCCTTTGCGAAGCTTGTGAACAGTCTCTATCATCTTTGCTTTGCTTAATGGATGTATACAGAAAAGAAGTTGATTATATTGTCTTATCAAAACTTATAGACGTATGCTATAACATCGTTAAAGTGGCAAGCGAGGCCATCCCTGATTCAATGAATGAGTTGAAGCAGTTTTTCATCAATCTCCTCATGTTTCCAGCAGAAGCATTAGGCTGGGAACCGGTACCTGGAGAGAGTCACTTCAGTACACTTTTGAGAGCAGAAGTCTTGCAGGCCTTGGTCACTTTTGGCCATGATAAAACTCAGAATGAAGCATTAGACCGCTTTCAGATATTATTGAATGATAGAAATACTCCGCTTCTAACTGCAGATACAAGAGCGGCAGCTTACATTGCAGTGATGAGGAATGCTAGCAGCTCTCACAAGGAAGGCTTTGAGGCTCTGTTAAACGTTTACAGAGAAGCTGGTACAGTGCAAGAGAAGGAACGAATTCTACGTTATTTTGCATCTTCTCCAGACCCAGATACAGTTGTTAATGTTTTGAACTTTTTCTTATGTGATGAGGTTCGAGATCAGGACATTGTATTTGGACTCTGTGGTATAAGCTTAGAATGCCGTGAAACAGCATGGAAATGGATGAAGGAGAACTGGGACCTGATCCTCACCAAATATGGTGCTGGAATGCTACTCACCCATTTCGTGAGAGACATTGTAACACCGTTTTGTAGCAATGAAAAGGCTGCTGAGGTTGAAGAATTTTTCGCAAGCCGGGTGCATCCTTCCTTTGCTATGACTCTGAAGCAAAGCATTGAGCAAGTCCGAATCAAGGCGAGGTGGGTTCAAGGCTTAAGGCAGGAGCAATCTATTCAAGAACTAGTCAAACAGTTGGCAGGCAAGAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001666 GO:0003674 GO:0003824 GO:0004177 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006508 GO:0006518 GO:0006807 GO:0006950 GO:0008150 GO:0008152 GO:0008233 GO:0008235 GO:0008237 GO:0008238 GO:0008270 GO:0009056 GO:0009628 GO:0009987 GO:0016787 GO:0019538 GO:0033218 GO:0033554 GO:0034641 GO:0036293 GO:0036294 GO:0042221 GO:0042277 GO:0043167 GO:0043169 GO:0043170 GO:0043171 GO:0043603 GO:0044237 GO:0044238 GO:0044248 GO:0044424 GO:0044444 GO:0044464 GO:0046872 GO:0046914 GO:0050896 GO:0051716 GO:0070006 GO:0070011 GO:0070482 GO:0070887 GO:0071453 GO:0071456 GO:0071704 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ERAP1_C Peptidase_M1

Protein Analysis

885

Amino Acids

100.14

Weight (kDa)

5.1

Isoelectric Point (pI)

38.33

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Peptidase_M1_N	PF17900	22 - 203	2e-49	Peptidase M1 N-terminal domain
Peptidase_M1	PF01433	238 - 454	3.2e-84	Peptidase family M1 domain
ERAP1_C	PF11838	540 - 858	5.3e-72	ERAP1-like C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000648)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G33090
fragaria_vesca	FvH4_2g31431 FvH4_2g31440 FvH4_6g34250 FvH4_6g34262 FvH4_6g34263
malus_domestica	MD08G1066400.v1.1 MD08G1066500.v1.1 MD08G1067400.v1.1 MD09G1070300.v1.1 MD09G1187200.v1.1 MD10G1090900.v1.1 MD15G1054400.v1.1 MD17G1171400.v1.1
prunus_persica	Prupe.1G407900_v2.0.a1 Prupe.1G408000_v2.0.a1 Prupe.1G408000_v2.0.a1 Prupe.1G408000_v2.0.a1 Prupe.1G457300_v2.0.a1 Prupe.3G044500_v2.0.a1 Prupe.3G044500_v2.0.a1
pyrus_communis	pycom08g05520 pycom08g05550 pycom08g05560 pycom08g05590 pycom09g10370 pycom09g10380 pycom10g07440 pycom10g07460 pycom15g05130 pycom15g05150 pycom17g16900
rosa_chinensis	RchiOBHm_Chr2g0144571 RchiOBHm_Chr2g0144611 RchiOBHm_Chr4g0390591 RchiOBHm_Chr6g0311371 RchiOBHm_Chr6g0311381
rosa_laevigata	RLG00000009010 RLG00000009289 RLG00000010411 RLG00000010412 RLG00000020090 RLG00000020092 RLG00000036974
rosa_multiflora	Rmu_co8212940.1_g000001 Rmu_sc0005789.1_g000001 Rmu_sc0008536.1_g000010 Rmu_sc0008536.1_g000011 Rmu_sc0009300.1_g000002
rosa_roxburghii	Rroxscaffold_1G00056400 Rroxscaffold_2G00084720 Rroxscaffold_2G00101200 Rroxscaffold_7G00157670 Rroxscaffold_7G00157680
rosa_rugosa	Rorug02G0387900 Rorug02G0388000 Rorug02G0388100 Rorug06G0388300 Rorug06G0388400
rosa_samantha	Rh2AG440000 Rh2AG440100 Rh2BG450000 Rh2BG450300 Rh2BG450500 Rh2CG427000 Rh2CG427200 Rh2DG459900 Rh2DG460300 Rh2DG460500 Rh6AG502600 Rh6AG502700 Rh6BG513300 Rh6CG519100 Rh6CG519200
rosa_wichuraiana	Rw2G036000 Rw6G043770 Rw6G043780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	520
Acc16I	TGCGCA	1 cut(s)	348
Acc36I	ACCTGC	2 cut(s)	472, 1436
Acc65I	GGTACC	1 cut(s)	1975
AccB1I	GGYRCC	2 cut(s)	119, 1975
AccB7I	CCANNNNNTGG	1 cut(s)	972
AccBSI	CCGCTC	1 cut(s)	2132
AccI	GTMKAC	1 cut(s)	1812
AciI	CCGC	4 cut(s)	800, 2074, 2108, 2132
AclI	AACGTT	1 cut(s)	2202
AclWI	GGATC	4 cut(s)	869, 1201, 1413, 2404
AcoI	YGGCCR	3 cut(s)	220, 1026, 2041
AcsI	RAATTY	8 cut(s)	158, 266, 809, 1418, 1517, 1730, 2241, 2507
AcuI	CTGAAG	2 cut(s)	1978, 2570
AfaI	GTAC	6 cut(s)	230, 501, 538, 1977, 1999, 2221
AfiI	CCNNNNNNNGG	3 cut(s)	972, 1979, 2578
AflII	CTTAAG	1 cut(s)	2599
AflIII	ACRYGT	1 cut(s)	1551
AgeI	ACCGGT	1 cut(s)	1972
AhlI	ACTAGT	1 cut(s)	2626
AjiI	CACGTC	1 cut(s)	1552
AjnI	CCWGG	2 cut(s)	1107, 1978
AjuI	GAANNNNNNNTTGG	4 cut(s)	1471, 1503, 1508, 1540
AleI	CACNNNNGTG	1 cut(s)	943
Alw26I	GTCTC	6 cut(s)	146, 252, 1068, 1501, 1785, 2451
AlwI	GGATC	4 cut(s)	869, 1201, 1413, 2404
AoxI	GGCC	8 cut(s)	220, 474, 625, 822, 1026, 1890, 2025, 2041
ApeKI	GCWGC	6 cut(s)	893, 1213, 1679, 2135, 2166, 2492
ApoI	RAATTY	8 cut(s)	158, 266, 809, 1418, 1517, 1730, 2241, 2507
ArsI	GACNNNNNNTTYG	4 cut(s)	150, 182, 2321, 2353
AsiGI	ACCGGT	1 cut(s)	1972
Asp700I	GAANNNNTTC	3 cut(s)	1271, 2241, 2300
Asp718I	GGTACC	1 cut(s)	1975
AspLEI	GCGC	1 cut(s)	349
AspS9I	GGNCC	2 cut(s)	822, 2404
AsuC2I	CCSGG	1 cut(s)	2522
AsuHPI	GGTGA	6 cut(s)	199, 1241, 1469, 1475, 2407, 2434
AsuNHI	GCTAGC	2 cut(s)	1675, 2162
AvaII	GGWCC	1 cut(s)	2404
BaeI	ACNNNNGTAYC	2 cut(s)	2268, 2301
BalI	TGGCCA	2 cut(s)	1028, 2043
BanI	GGYRCC	2 cut(s)	119, 1975
BbvCI	CCTCAGC	1 cut(s)	2496
BbvI	GCAGC	6 cut(s)	905, 1200, 1691, 2147, 2178, 2479
BccI	CCATC	9 cut(s)	248, 377, 511, 548, 653, 1184, 1345, 1454, 1901
BceAI	ACGGC	3 cut(s)	235, 713, 2352
BciT130I	CCWGG	2 cut(s)	1109, 1980
BclI	TGATCA	1 cut(s)	843
BcnI	CCSGG	1 cut(s)	2522
BcoDI	GTCTC	6 cut(s)	146, 252, 1068, 1501, 1785, 2451
BcuI	ACTAGT	1 cut(s)	2626
BfaI	CTAG	3 cut(s)	1676, 2163, 2627
BfmI	CTRYAG	4 cut(s)	333, 1214, 1651, 2118
BfrI	CTTAAG	1 cut(s)	2599
BfuAI	ACCTGC	2 cut(s)	472, 1436
BglII	AGATCT	2 cut(s)	1300, 1558
BisI	GCNGC	7 cut(s)	894, 1214, 1680, 2133, 2136, 2167, 2493
BlsI	GCNGC	7 cut(s)	895, 1215, 1681, 2134, 2137, 2168, 2494
Bme1390I	CCNGG	3 cut(s)	1109, 1980, 2522
Bme18I	GGWCC	1 cut(s)	2404
BmgBI	CACGTC	1 cut(s)	1552
BmgT120I	GGNCC	2 cut(s)	822, 2404
BmiI	GGNNCC	6 cut(s)	121, 804, 823, 1971, 1977, 2405
BmrFI	CCNGG	3 cut(s)	1109, 1980, 2522
BmrI	ACTGGG	1 cut(s)	2410
BmsI	GCATC	7 cut(s)	150, 421, 431, 1093, 1162, 2267, 2536
BmtI	GCTAGC	2 cut(s)	1679, 2166
BmuI	ACTGGG	1 cut(s)	2410
BpmI	CTGGAG	2 cut(s)	2001, 2250
Bpu10I	CCTNAGC	2 cut(s)	137, 2496
BpuEI	CTTGAG	1 cut(s)	455
BpuMI	CCSGG	1 cut(s)	2522
BsaBI	GATNNNNATC	2 cut(s)	81, 192
BsaI	GGTCTC	2 cut(s)	146, 1068
BsaJI	CCNNGG	4 cut(s)	825, 966, 1107, 2028
BsaWI	WCCGGW	1 cut(s)	1972
Bsc4I	CCNNNNNNNGG	3 cut(s)	972, 1979, 2578
Bse118I	RCCGGY	1 cut(s)	1972
Bse1I	ACTGG	3 cut(s)	1090, 1539, 2405
Bse3DI	GCAATG	2 cut(s)	2142, 2488
Bse8I	GATNNNNATC	2 cut(s)	81, 192
BseBI	CCWGG	2 cut(s)	1109, 1980
BseDI	CCNNGG	4 cut(s)	825, 966, 1107, 2028
BseJI	GATNNNNATC	2 cut(s)	81, 192
BseLI	CCNNNNNNNGG	3 cut(s)	972, 1979, 2578
BseMI	GCAATG	2 cut(s)	2142, 2488
BseMII	CTCAG	3 cut(s)	1038, 2069, 2487
BseNI	ACTGG	3 cut(s)	1090, 1539, 2405
BseRI	GAGGAG	2 cut(s)	402, 1928
BseXI	GCAGC	6 cut(s)	905, 1200, 1691, 2147, 2178, 2479
BseYI	CCCAGC	1 cut(s)	1965
BsgI	GTGCAG	2 cut(s)	91, 146
BshFI	GGCC	8 cut(s)	222, 476, 627, 824, 1028, 1892, 2027, 2043
BshNI	GGYRCC	2 cut(s)	119, 1975
BshTI	ACCGGT	1 cut(s)	1972
BsiSI	CCGG	3 cut(s)	117, 1973, 2521
BslFI	GGGAC	1 cut(s)	2417
BslI	CCNNNNNNNGG	3 cut(s)	972, 1979, 2578
BsmAI	GTCTC	6 cut(s)	146, 252, 1068, 1501, 1785, 2451
BsmBI	CGTCTC	2 cut(s)	252, 1501
BsmFI	GGGAC	1 cut(s)	2417
BsmI	GAATGC	6 cut(s)	1215, 1291, 1737, 2164, 2369, 2439
BsnI	GGCC	8 cut(s)	222, 476, 627, 824, 1028, 1892, 2027, 2043
Bso31I	GGTCTC	2 cut(s)	146, 1068
Bsp19I	CCATGG	2 cut(s)	825, 966
BspACI	CCGC	4 cut(s)	800, 2074, 2108, 2132
BspANI	GGCC	8 cut(s)	222, 476, 627, 824, 1028, 1892, 2027, 2043
BspCNI	CTCAG	3 cut(s)	1039, 2068, 2488
BspLI	GGNNCC	6 cut(s)	121, 804, 823, 1971, 1977, 2405
BspMAI	CTGCAG	3 cut(s)	337, 1218, 2122
BspMI	ACCTGC	2 cut(s)	472, 1436
BspOI	GCTAGC	2 cut(s)	1679, 2166
BspPI	GGATC	4 cut(s)	869, 1201, 1413, 2404
BspT107I	GGYRCC	2 cut(s)	119, 1975
BspTI	CTTAAG	1 cut(s)	2599
BspTNI	GGTCTC	2 cut(s)	146, 1068
BsrBI	CCGCTC	1 cut(s)	2132
BsrDI	GCAATG	2 cut(s)	2142, 2488
BsrFI	RCCGGY	1 cut(s)	1972
BsrI	ACTGG	3 cut(s)	1090, 1539, 2405
BssAI	RCCGGY	1 cut(s)	1972
BssECI	CCNNGG	4 cut(s)	825, 966, 1107, 2028
BssNAI	GTATAC	1 cut(s)	1813
BssT1I	CCWWGG	3 cut(s)	825, 966, 2028
Bst1107I	GTATAC	1 cut(s)	1813
Bst2UI	CCWGG	2 cut(s)	1109, 1980
Bst6I	CTCTTC	2 cut(s)	144, 689
BstAFI	CTTAAG	1 cut(s)	2599
BstDEI	CTNAG	9 cut(s)	137, 1047, 1093, 1290, 1365, 1688, 2055, 2359, 2496
BstDSI	CCRYGG	2 cut(s)	825, 966
BstEII	GGTNACC	1 cut(s)	961
BstHHI	GCGC	1 cut(s)	349
BstMAI	GTCTC	6 cut(s)	146, 252, 1068, 1501, 1785, 2451
BstMWI	GCNNNNNNNGC	6 cut(s)	431, 473, 620, 1889, 2144, 2364
BstNI	CCWGG	2 cut(s)	1109, 1980
BstNSI	RCATGY	1 cut(s)	1757
BstPI	GGTNACC	1 cut(s)	961
BstSCI	CCNGG	3 cut(s)	1107, 1978, 2520
BstSFI	CTRYAG	4 cut(s)	333, 1214, 1651, 2118
BstV1I	GCAGC	6 cut(s)	905, 1200, 1691, 2147, 2178, 2479
BstX2I	RGATCY	3 cut(s)	1193, 1300, 1558
BstXI	CCANNNNNNTGG	1 cut(s)	1546
BstYI	RGATCY	3 cut(s)	1193, 1300, 1558
BstZ17I	GTATAC	1 cut(s)	1813
BsuRI	GGCC	8 cut(s)	222, 476, 627, 824, 1028, 1892, 2027, 2043
BtgI	CCRYGG	2 cut(s)	825, 966
BtgZI	GCGATG	3 cut(s)	255, 454, 1620
BtrI	CACGTC	1 cut(s)	1552
BtsI	GCAGTG	1 cut(s)	2154
BtsIMutI	CAGTG	6 cut(s)	950, 1029, 1348, 1546, 2154, 2229
BveI	ACCTGC	2 cut(s)	472, 1436
CfoI	GCGC	1 cut(s)	349
Cfr10I	RCCGGY	1 cut(s)	1972
Cfr13I	GGNCC	2 cut(s)	822, 2404
CseI	GACGC	1 cut(s)	1518
Csp6I	GTAC	6 cut(s)	229, 500, 537, 1976, 1998, 2220
CspAI	ACCGGT	1 cut(s)	1972
CspCI	CAANNNNNGTGG	2 cut(s)	1113, 1148
CviQI	GTAC	6 cut(s)	229, 500, 537, 1976, 1998, 2220
DdeI	CTNAG	9 cut(s)	137, 1047, 1093, 1290, 1365, 1688, 2055, 2359, 2496
DraI	TTTAAA	1 cut(s)	720
DrdI	GACNNNNNNGTC	1 cut(s)	520
DseDI	GACNNNNNNGTC	1 cut(s)	520
EaeI	YGGCCR	3 cut(s)	220, 1026, 2041
Eam1104I	CTCTTC	2 cut(s)	144, 689
EarI	CTCTTC	2 cut(s)	144, 689
Eco130I	CCWWGG	3 cut(s)	825, 966, 2028
Eco147I	AGGCCT	1 cut(s)	2027
Eco31I	GGTCTC	2 cut(s)	146, 1068
Eco32I	GATATC	1 cut(s)	1379
Eco47I	GGWCC	1 cut(s)	2404
Eco57I	CTGAAG	2 cut(s)	1978, 2570
Eco91I	GGTNACC	1 cut(s)	961
EcoO109I	RGGNCCY	1 cut(s)	2404
EcoO65I	GGTNACC	1 cut(s)	961
EcoRI	GAATTC	1 cut(s)	2241
EcoRII	CCWGG	2 cut(s)	1107, 1978
EcoRV	GATATC	1 cut(s)	1379
EcoT14I	CCWWGG	3 cut(s)	825, 966, 2028
ErhI	CCWWGG	3 cut(s)	825, 966, 2028
Esp3I	CGTCTC	2 cut(s)	252, 1501
FalI	AAGNNNNNCTT	4 cut(s)	464, 496, 2168, 2200
FaqI	GGGAC	1 cut(s)	2417
FbaI	TGATCA	1 cut(s)	843
FblI	GTMKAC	1 cut(s)	1812
Fnu4HI	GCNGC	7 cut(s)	894, 1214, 1680, 2133, 2136, 2167, 2493
Fsp4HI	GCNGC	7 cut(s)	894, 1214, 1680, 2133, 2136, 2167, 2493
FspAI	RTGCGCAY	1 cut(s)	348
FspBI	CTAG	3 cut(s)	1676, 2163, 2627
FspI	TGCGCA	1 cut(s)	348
GlaI	GCGC	1 cut(s)	348
GluI	GCNGC	7 cut(s)	894, 1214, 1680, 2133, 2136, 2167, 2493
GsaI	CCCAGC	1 cut(s)	1969
GsuI	CTGGAG	2 cut(s)	2001, 2250
HaeIII	GGCC	8 cut(s)	222, 476, 627, 824, 1028, 1892, 2027, 2043
HapII	CCGG	3 cut(s)	117, 1973, 2521
HgaI	GACGC	1 cut(s)	1518
HhaI	GCGC	1 cut(s)	349
Hin6I	GCGC	1 cut(s)	347
HinP1I	GCGC	1 cut(s)	347
HincII	GTYRAC	1 cut(s)	600
HindII	GTYRAC	1 cut(s)	600
HindIII	AAGCTT	2 cut(s)	1767, 2356
HpaII	CCGG	3 cut(s)	117, 1973, 2521
HphI	GGTGA	6 cut(s)	199, 1241, 1469, 1475, 2407, 2434
Hpy188I	TCNGA	8 cut(s)	508, 658, 1321, 1558, 2058, 2082, 2550, 2573
HpyCH4IV	ACGT	5 cut(s)	1150, 1551, 1857, 2202, 2248
HpyF10VI	GCNNNNNNNGC	6 cut(s)	431, 473, 620, 1889, 2144, 2364
HpyF3I	CTNAG	9 cut(s)	137, 1047, 1093, 1290, 1365, 1688, 2055, 2359, 2496
HpySE526I	ACGT	5 cut(s)	1150, 1551, 1857, 2202, 2248
HspAI	GCGC	1 cut(s)	347
KpnI	GGTACC	1 cut(s)	1979
Ksp22I	TGATCA	1 cut(s)	843
LmnI	GCTCC	2 cut(s)	1574, 2608
Lsp1109I	GCAGC	6 cut(s)	905, 1200, 1691, 2147, 2178, 2479
LweI	GCATC	7 cut(s)	150, 421, 431, 1093, 1162, 2267, 2536
MaeI	CTAG	3 cut(s)	1676, 2163, 2627
MaeII	ACGT	5 cut(s)	1150, 1551, 1857, 2202, 2248
MaeIII	GTNAC	5 cut(s)	409, 961, 1988, 2032, 2464
MbiI	CCGCTC	1 cut(s)	2132
MboII	GAAGA	8 cut(s)	71, 161, 656, 706, 1310, 1679, 2253, 2516
MflI	RGATCY	3 cut(s)	1193, 1300, 1558
MlsI	TGGCCA	2 cut(s)	1028, 2043
MluNI	TGGCCA	2 cut(s)	1028, 2043
MlyI	GAGTC	4 cut(s)	321, 1996, 2337, 2539
Mox20I	TGGCCA	2 cut(s)	1028, 2043
MroXI	GAANNNNTTC	3 cut(s)	1271, 2241, 2300
MscI	TGGCCA	2 cut(s)	1028, 2043
MslI	CAYNNNNRTG	4 cut(s)	943, 1208, 2147, 2383
Msp20I	TGGCCA	2 cut(s)	1028, 2043
MspCI	CTTAAG	1 cut(s)	2599
MspI	CCGG	3 cut(s)	117, 1973, 2521
MspR9I	CCNGG	3 cut(s)	1109, 1980, 2522
Mva1269I	GAATGC	6 cut(s)	1215, 1291, 1737, 2164, 2369, 2439
MvaI	CCWGG	2 cut(s)	1109, 1980
MwoI	GCNNNNNNNGC	6 cut(s)	431, 473, 620, 1889, 2144, 2364
NciI	CCSGG	1 cut(s)	2522
NcoI	CCATGG	2 cut(s)	825, 966
NheI	GCTAGC	2 cut(s)	1675, 2162
NlaIV	GGNNCC	6 cut(s)	121, 804, 823, 1971, 1977, 2405
NmuCI	GTSAC	2 cut(s)	1988, 2032
NsbI	TGCGCA	1 cut(s)	348
NspI	RCATGY	1 cut(s)	1757
OliI	CACNNNNGTG	1 cut(s)	943
PceI	AGGCCT	1 cut(s)	2027
PcsI	WCGNNNNNNNCGW	1 cut(s)	2245
PctI	GAATGC	6 cut(s)	1215, 1291, 1737, 2164, 2369, 2439
PdmI	GAANNNNTTC	3 cut(s)	1271, 2241, 2300
PfeI	GAWTC	6 cut(s)	584, 1272, 1325, 1748, 1901, 2574
PflMI	CCANNNNNTGG	1 cut(s)	972
PinAI	ACCGGT	1 cut(s)	1972
PkrI	GCNGC	7 cut(s)	895, 1215, 1681, 2134, 2137, 2168, 2494
PleI	GAGTC	4 cut(s)	320, 1995, 2337, 2539
PpsI	GAGTC	4 cut(s)	320, 1995, 2337, 2539
PpuMI	RGGWCCY	1 cut(s)	2404
Psp1406I	AACGTT	1 cut(s)	2202
Psp5II	RGGWCCY	1 cut(s)	2404
Psp6I	CCWGG	2 cut(s)	1107, 1978
PspEI	GGTNACC	1 cut(s)	961
PspFI	CCCAGC	1 cut(s)	1965
PspGI	CCWGG	2 cut(s)	1107, 1978
PspN4I	GGNNCC	6 cut(s)	121, 804, 823, 1971, 1977, 2405
PspPI	GGNCC	2 cut(s)	822, 2404
PspPPI	RGGWCCY	1 cut(s)	2404
PsrI	GAACNNNNNNTAC	2 cut(s)	2229, 2261
PstI	CTGCAG	3 cut(s)	337, 1218, 2122
PsuI	RGATCY	3 cut(s)	1193, 1300, 1558
RsaI	GTAC	6 cut(s)	230, 501, 538, 1977, 1999, 2221
RsaNI	GTAC	6 cut(s)	229, 500, 537, 1976, 1998, 2220
RseI	CAYNNNNRTG	4 cut(s)	943, 1208, 2147, 2383
SatI	GCNGC	7 cut(s)	894, 1214, 1680, 2133, 2136, 2167, 2493
Sau96I	GGNCC	2 cut(s)	822, 2404
SchI	GAGTC	4 cut(s)	321, 1996, 2337, 2539
ScrFI	CCNGG	3 cut(s)	1109, 1980, 2522
SfaNI	GCATC	7 cut(s)	150, 421, 431, 1093, 1162, 2267, 2536
SfcI	CTRYAG	4 cut(s)	333, 1214, 1651, 2118
SinI	GGWCC	1 cut(s)	2404
SmiMI	CAYNNNNRTG	4 cut(s)	943, 1208, 2147, 2383
SmlI	CTYRAG	2 cut(s)	470, 2599
SmoI	CTYRAG	2 cut(s)	470, 2599
SpeI	ACTAGT	1 cut(s)	2626
SseBI	AGGCCT	1 cut(s)	2027
SsiI	CCGC	4 cut(s)	800, 2074, 2108, 2132
SspI	AATATT	1 cut(s)	1167
SspMI	CTAG	3 cut(s)	1676, 2163, 2627
StuI	AGGCCT	1 cut(s)	2027
StyD4I	CCNGG	3 cut(s)	1107, 1978, 2520
StyI	CCWWGG	3 cut(s)	825, 966, 2028
TaiI	ACGT	5 cut(s)	1153, 1554, 1860, 2205, 2251
TaqI	TCGA	2 cut(s)	1684, 2320
TatI	WGTACW	2 cut(s)	536, 1997
TauI	GCSGC	1 cut(s)	2135
TfiI	GAWTC	6 cut(s)	584, 1272, 1325, 1748, 1901, 2574
TscAI	CASTG	6 cut(s)	950, 1036, 1348, 1546, 2154, 2229
TseFI	GTSAC	2 cut(s)	1988, 2032
TseI	GCWGC	6 cut(s)	893, 1213, 1679, 2135, 2166, 2492
Tsp45I	GTSAC	2 cut(s)	1988, 2032
TspRI	CASTG	6 cut(s)	950, 1036, 1348, 1546, 2154, 2229
Van91I	CCANNNNNTGG	1 cut(s)	972
Vha464I	CTTAAG	1 cut(s)	2599
VpaK11BI	GGWCC	1 cut(s)	2404
XapI	RAATTY	8 cut(s)	158, 266, 809, 1418, 1517, 1730, 2241, 2507
XceI	RCATGY	1 cut(s)	1757
XcmI	CCANNNNNNNNNTGG	1 cut(s)	790
XmiI	GTMKAC	1 cut(s)	1812
XmnI	GAANNNNTTC	3 cut(s)	1271, 2241, 2300
XspI	CTAG	3 cut(s)	1676, 2163, 2627

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.