pycom09g10380

Aminopeptidase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr9
Physical Location & Seq
Forward (+)
8523790 .. 8526654
2865 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom09g10380.4

Sequence Viewer

Length: 1446 bp
ATGCTGCAGGTTTATCTCGGGGATGACATATTCCAGAAATCATTAAGTTCCTACATGAAAAGATATTCTGGCAAAAATGCGAAGACAGAAGATTTATGGAGTGTTCTTTCGGAGGAATCTGGTGTCAAAGTCAGTGAAATGATGGATGGTTGGACAAAGAAAAAAGGATATCCTGTTATCTCAGTAAAATCCAAAGAGAATATTTTGGAATTTGAGCAGACACAGTTCCTGTCATCTGGTTTGCATGGTGGTGGGAAATGGATCGTTCCAATAACTTTTTCAGTTGGTTCGTATGAGAGGCGCGAGAATTTCCTTTTGGAAACAAAGTCCAGAGAATTGAACATATCAGATCTTGTCGATTCCTCTGATAATGATTTAAAGAATAAAGAGAAATATGATGAACAACTGTGGATCAAGGTTAACATCGAGCAGAGCGGTTTCTATAGGGTCAATTATGAAGATAAGCTTGCAGCTCGGCTTAGGAAGGCTATTAAGCATAAGAGCTTAGAAGCAACAGACAAATTCGGCATTCTGGACGATGCATATGCTCTTTGTGAAGCTTGTGAACAATCACTTTCATCTTTGCTTTCCTTGATGGATGCATACAGCAAAGAAGAAGAGTATATTGTCGTAACAAAATTGATAGATGTTTGTTATAATGTCGTTAATATTTCAAGTGAGGCCATCCCAGATTCGGCAAATGAGTTGAAAAAGTTTTTCATTAGTCTCCTCCTGTTTCCAGCAGAAAAACTTGGTTGGGATTCGGTACCAGGAGAGAGTCACTTCAGTGCACTTCTGAGAGCAGAAATCTTGCAAGCTTTGGTTACGTTTGGCCATGACAAAACTGAAAAAGAAGCATTAGACCGATTTCAGACATTATTGAACGATAGAAACACTCCACTTCTTTCAGCTGATACGAGAGGGGCTGCTTGCATTGCCGTGATGAGGAATGCTAGCAGCTCCAATAGAGAAGGTTTGGAGTCCCTACTAAATCTTTACAGAGAAGCAAATACAGTGCAAGAGAAGGAAAGGATCCTACGTTTTTTTGCATCTTCTCCAGACCCAGATACAGTTGTGGAGGTTCTGGACTTTTTTTTATCCGAAGAGGTTCGAGATCAAGACATTATATATGGACTTTTTGGTATAAGTTTAGAATGCCGCGAAACAGCGTGGAAGTGGTTAAAGGAGAATTGGGACCTGATCCTGACCAAATATGGCGCTGGGATGCTGCTCACCCATTTCGTAACAGACATTGTGACACCGCTTTGCAGCAACGAAAAGGCTGATGAGGTCGAAGAATTTTTCGCTAGCAGGGCGCATCCTGCAATTTCCTTGACTTTGGAGCAAAGCATTGCGCAAGTCCGAATCAAGGCGAGGTGGGTTGAACACACGAGGCAGGAGCAATCCCTTGAAGGGCAAGTCAGAGAACTAGCAGGCGAGAAATGA

Protein Analysis

482

Amino Acids

54.74

Weight (kDa)

5.0

Isoelectric Point (pI)

42.94

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000648)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 657
Acc16I TGCGCA 1 cut(s) 1356
Acc65I GGTACC 1 cut(s) 766
AccB1I GGYRCC 1 cut(s) 766
AccBSI CCGCTC 1 cut(s) 435
AccII CGCG 2 cut(s) 303, 1161
AciI CCGC 3 cut(s) 435, 1159, 1262
AclWI GGATC 5 cut(s) 269, 419, 1027, 1040, 1195
AcoI YGGCCR 1 cut(s) 832
AcsI RAATTY 4 cut(s) 209, 307, 521, 1298
AcuI CTGAAG 1 cut(s) 769
AfaI GTAC 1 cut(s) 768
AfiI CCNNNNNNNGG 4 cut(s) 694, 945, 1369, 1413
AgsI TTSAA 6 cut(s) 340, 675, 709, 883, 1385, 1412
AjnI CCWGG 1 cut(s) 769
AjuI GAANNNNNNNTTGG 4 cut(s) 262, 294, 299, 331
AleI CACNNNNGTG 1 cut(s) 786
AluBI AGCT 7 cut(s) 466, 473, 504, 560, 818, 911, 960
AluI AGCT 7 cut(s) 466, 473, 504, 560, 818, 911, 960
Alw21I GWGCWC 1 cut(s) 793
Alw26I GTCTC 1 cut(s) 731
Alw44I GTGCAC 1 cut(s) 789
AlwI GGATC 5 cut(s) 269, 419, 1027, 1040, 1195
AlwNI CAGNNNCTG 1 cut(s) 229
Ama87I CYCGRG 1 cut(s) 17
AoxI GGCC 2 cut(s) 681, 832
ApaLI GTGCAC 1 cut(s) 789
ApeKI GCWGC 6 cut(s) 4, 470, 926, 957, 1228, 1269
ApoI RAATTY 4 cut(s) 209, 307, 521, 1298
Asp700I GAANNNNTTC 1 cut(s) 1107
Asp718I GGTACC 1 cut(s) 766
AspLEI GCGC 4 cut(s) 303, 1220, 1318, 1357
AspS9I GGNCC 1 cut(s) 1195
AsuHPI GGTGA 1 cut(s) 1225
AsuNHI GCTAGC 2 cut(s) 953, 1307
AvaI CYCGRG 1 cut(s) 17
AvaII GGWCC 1 cut(s) 1195
BaeGI GKGCMC 1 cut(s) 793
BaeI ACNNNNGTAYC 2 cut(s) 1059, 1092
BalI TGGCCA 1 cut(s) 834
BamHI GGATCC 1 cut(s) 1032
BanI GGYRCC 1 cut(s) 766
BauI CACGAG 1 cut(s) 1390
BbsI GAAGAC 1 cut(s) 89
Bbv12I GWGCWC 1 cut(s) 793
BbvI GCAGC 5 cut(s) 482, 913, 969, 1215, 1281
BccI CCATC 4 cut(s) 136, 140, 589, 692
BceAI ACGGC 1 cut(s) 923
BcgI CGANNNNNNTGC 2 cut(s) 527, 561
BciT130I CCWGG 1 cut(s) 771
BcoDI GTCTC 1 cut(s) 731
BfaI CTAG 3 cut(s) 954, 1308, 1430
BfmI CTRYAG 2 cut(s) 5, 442
BfoI RGCGCY 1 cut(s) 1221
BglII AGATCT 1 cut(s) 349
BisI GCNGC 7 cut(s) 5, 471, 927, 958, 1159, 1229, 1270
BlsI GCNGC 7 cut(s) 6, 472, 928, 959, 1160, 1230, 1271
Bme1390I CCNGG 1 cut(s) 771
Bme18I GGWCC 1 cut(s) 1195
BmeT110I CYCGRG 1 cut(s) 17
BmgT120I GGNCC 1 cut(s) 1195
BmiI GGNNCC 3 cut(s) 768, 1034, 1196
BmrFI CCNGG 1 cut(s) 771
BmsI GCATC 5 cut(s) 529, 589, 1058, 1215, 1327
BmtI GCTAGC 2 cut(s) 957, 1311
BpiI GAAGAC 1 cut(s) 89
BpmI CTGGAG 1 cut(s) 1041
Bpu10I CCTNAGC 1 cut(s) 479
Bsc4I CCNNNNNNNGG 4 cut(s) 694, 945, 1369, 1413
Bse3DI GCAATG 2 cut(s) 933, 1350
BseBI CCWGG 1 cut(s) 771
BseGI GGATG 6 cut(s) 28, 151, 604, 684, 1230, 1318
BseLI CCNNNNNNNGG 4 cut(s) 694, 945, 1369, 1413
BseMI GCAATG 2 cut(s) 933, 1350
BseMII CTCAG 2 cut(s) 195, 788
BseRI GAGGAG 1 cut(s) 719
BseSI GKGCMC 1 cut(s) 793
BseXI GCAGC 5 cut(s) 482, 913, 969, 1215, 1281
BseYI CCCAGC 1 cut(s) 1220
Bsh1236I CGCG 2 cut(s) 303, 1161
BshFI GGCC 2 cut(s) 683, 834
BshNI GGYRCC 1 cut(s) 766
BsiHKAI GWGCWC 1 cut(s) 793
BsiHKCI CYCGRG 1 cut(s) 17
BslFI GGGAC 2 cut(s) 967, 1208
BslI CCNNNNNNNGG 4 cut(s) 694, 945, 1369, 1413
BsmAI GTCTC 1 cut(s) 731
BsmFI GGGAC 2 cut(s) 967, 1208
BsmI GAATGC 3 cut(s) 528, 955, 1160
BsnI GGCC 2 cut(s) 683, 834
BsoBI CYCGRG 1 cut(s) 17
Bsp1286I GDGCHC 1 cut(s) 793
Bsp143I GATC 6 cut(s) 261, 349, 411, 1032, 1114, 1200
BspACI CCGC 3 cut(s) 435, 1159, 1262
BspANI GGCC 2 cut(s) 683, 834
BspCNI CTCAG 2 cut(s) 194, 789
BspFNI CGCG 2 cut(s) 303, 1161
BspLI GGNNCC 3 cut(s) 768, 1034, 1196
BspMAI CTGCAG 1 cut(s) 9
BspOI GCTAGC 2 cut(s) 957, 1311
BspPI GGATC 5 cut(s) 269, 419, 1027, 1040, 1195
BspT107I GGYRCC 1 cut(s) 766
BsrBI CCGCTC 1 cut(s) 435
BsrDI GCAATG 2 cut(s) 933, 1350
BssMI GATC 6 cut(s) 261, 349, 411, 1032, 1114, 1200
BssSI CACGAG 1 cut(s) 1390
Bst2BI CACGAG 1 cut(s) 1390
Bst2UI CCWGG 1 cut(s) 771
Bst4CI ACNGT 4 cut(s) 225, 408, 1015, 1072
Bst6I CTCTTC 2 cut(s) 612, 1098
BstC8I GCNNGC 6 cut(s) 468, 816, 931, 955, 1309, 1435
BstDEI CTNAG 4 cut(s) 181, 479, 505, 797
BstF5I GGATG 6 cut(s) 28, 151, 604, 684, 1230, 1318
BstFNI CGCG 2 cut(s) 303, 1161
BstH2I RGCGCY 1 cut(s) 1221
BstHHI GCGC 4 cut(s) 303, 1220, 1318, 1357
BstKTI GATC 6 cut(s) 264, 352, 414, 1035, 1117, 1203
BstMAI GTCTC 1 cut(s) 731
BstMBI GATC 6 cut(s) 261, 349, 411, 1032, 1114, 1200
BstMWI GCNNNNNNNGC 3 cut(s) 935, 1313, 1322
BstNI CCWGG 1 cut(s) 771
BstSCI CCNGG 1 cut(s) 769
BstSFI CTRYAG 2 cut(s) 5, 442
BstSLI GKGCMC 1 cut(s) 793
BstUI CGCG 2 cut(s) 303, 1161
BstV1I GCAGC 5 cut(s) 482, 913, 969, 1215, 1281
BstV2I GAAGAC 1 cut(s) 89
BstX2I RGATCY 2 cut(s) 349, 1032
BstYI RGATCY 2 cut(s) 349, 1032
BsuRI GGCC 2 cut(s) 683, 834
BtsCI GGATG 6 cut(s) 28, 151, 604, 684, 1230, 1318
BtsIMutI CAGTG 3 cut(s) 139, 793, 1020
Cac8I GCNNGC 6 cut(s) 468, 816, 931, 955, 1309, 1435
CaiI CAGNNNCTG 1 cut(s) 229
CfoI GCGC 4 cut(s) 303, 1220, 1318, 1357
Cfr13I GGNCC 1 cut(s) 1195
Csp6I GTAC 1 cut(s) 767
CviAII CATG 3 cut(s) 55, 245, 836
CviQI GTAC 1 cut(s) 767
DdeI CTNAG 4 cut(s) 181, 479, 505, 797
DpnI GATC 6 cut(s) 263, 351, 413, 1034, 1116, 1202
DpnII GATC 6 cut(s) 261, 349, 411, 1032, 1114, 1200
DraI TTTAAA 1 cut(s) 378
EaeI YGGCCR 1 cut(s) 832
Eam1104I CTCTTC 2 cut(s) 612, 1098
EarI CTCTTC 2 cut(s) 612, 1098
Eco32I GATATC 1 cut(s) 170
Eco47I GGWCC 1 cut(s) 1195
Eco57I CTGAAG 1 cut(s) 769
Eco88I CYCGRG 1 cut(s) 17
EcoO109I RGGNCCY 1 cut(s) 1195
EcoRII CCWGG 1 cut(s) 769
EcoRV GATATC 1 cut(s) 170
EcoT22I ATGCAT 2 cut(s) 544, 604
FaeI CATG 3 cut(s) 58, 248, 839
FalI AAGNNNNNCTT 2 cut(s) 450, 482
FaqI GGGAC 2 cut(s) 967, 1208
FatI CATG 3 cut(s) 54, 244, 835
FauNDI CATATG 1 cut(s) 544
Fnu4HI GCNGC 7 cut(s) 5, 471, 927, 958, 1159, 1229, 1270
FokI GGATG 6 cut(s) 35, 158, 611, 671, 1237, 1305
Fsp4HI GCNGC 7 cut(s) 5, 471, 927, 958, 1159, 1229, 1270
FspBI CTAG 3 cut(s) 954, 1308, 1430
FspI TGCGCA 1 cut(s) 1356
GlaI GCGC 4 cut(s) 302, 1219, 1317, 1356
GluI GCNGC 7 cut(s) 5, 471, 927, 958, 1159, 1229, 1270
GsaI CCCAGC 1 cut(s) 1224
GsuI CTGGAG 1 cut(s) 1041
HaeII RGCGCY 1 cut(s) 1221
HaeIII GGCC 2 cut(s) 683, 834
HhaI GCGC 4 cut(s) 303, 1220, 1318, 1357
Hin1II CATG 3 cut(s) 58, 248, 839
Hin6I GCGC 4 cut(s) 301, 1218, 1316, 1355
HinP1I GCGC 4 cut(s) 301, 1218, 1316, 1355
HincII GTYRAC 1 cut(s) 421
HindII GTYRAC 1 cut(s) 421
HindIII AAGCTT 3 cut(s) 464, 558, 816
HinfI GANTC 7 cut(s) 116, 359, 692, 761, 778, 980, 1365
HpaI GTTAAC 1 cut(s) 421
HphI GGTGA 1 cut(s) 1225
Hpy166II GTNNAC 3 cut(s) 421, 566, 791
Hpy188I TCNGA 8 cut(s) 112, 349, 367, 798, 873, 1102, 1364, 1424
Hpy188III TCNNGA 8 cut(s) 34, 330, 533, 1058, 1085, 1112, 1118, 1204
Hpy8I GTNNAC 3 cut(s) 421, 566, 791
HpyAV CCTTC 4 cut(s) 478, 965, 1018, 1406
HpyCH4III ACNGT 4 cut(s) 225, 408, 1015, 1072
HpyCH4IV ACGT 2 cut(s) 827, 1039
HpyF10VI GCNNNNNNNGC 3 cut(s) 935, 1313, 1322
HpyF3I CTNAG 4 cut(s) 181, 479, 505, 797
HpySE526I ACGT 2 cut(s) 827, 1039
Hsp92II CATG 3 cut(s) 58, 248, 839
HspAI GCGC 4 cut(s) 301, 1218, 1316, 1355
KpnI GGTACC 1 cut(s) 770
KspAI GTTAAC 1 cut(s) 421
Kzo9I GATC 6 cut(s) 261, 349, 411, 1032, 1114, 1200
LmnI GCTCC 3 cut(s) 965, 1342, 1399
Lsp1109I GCAGC 5 cut(s) 482, 913, 969, 1215, 1281
LweI GCATC 5 cut(s) 529, 589, 1058, 1215, 1327
MaeI CTAG 3 cut(s) 954, 1308, 1430
MaeII ACGT 2 cut(s) 827, 1039
MaeIII GTNAC 5 cut(s) 631, 779, 823, 1243, 1255
MalI GATC 6 cut(s) 263, 351, 413, 1034, 1116, 1202
MbiI CCGCTC 1 cut(s) 435
MboI GATC 6 cut(s) 261, 349, 411, 1032, 1114, 1200
MboII GAAGA 8 cut(s) 94, 101, 470, 626, 629, 1044, 1115, 1307
MflI RGATCY 2 cut(s) 349, 1032
MhlI GDGCHC 1 cut(s) 793
MlsI TGGCCA 1 cut(s) 834
MluCI AATT 9 cut(s) 209, 307, 335, 451, 521, 638, 1189, 1298, 1326
MluNI TGGCCA 1 cut(s) 834
MlyI GAGTC 2 cut(s) 787, 989
MmeI TCCRAC 1 cut(s) 131
Mox20I TGGCCA 1 cut(s) 834
Mph1103I ATGCAT 2 cut(s) 544, 604
MroXI GAANNNNTTC 1 cut(s) 1107
MscI TGGCCA 1 cut(s) 834
MseI TTAA 6 cut(s) 44, 377, 420, 492, 666, 1181
MslI CAYNNNNRTG 3 cut(s) 249, 786, 938
Msp20I TGGCCA 1 cut(s) 834
MspA1I CMGCKG 1 cut(s) 911
MspR9I CCNGG 1 cut(s) 771
Mva1269I GAATGC 3 cut(s) 528, 955, 1160
MvaI CCWGG 1 cut(s) 771
MvnI CGCG 2 cut(s) 303, 1161
MwoI GCNNNNNNNGC 3 cut(s) 935, 1313, 1322
NdeI CATATG 1 cut(s) 544
NdeII GATC 6 cut(s) 261, 349, 411, 1032, 1114, 1200
NheI GCTAGC 2 cut(s) 953, 1307
NlaIII CATG 3 cut(s) 58, 248, 839
NlaIV GGNNCC 3 cut(s) 768, 1034, 1196
NmeAIII GCCGAG 1 cut(s) 454
NmuCI GTSAC 2 cut(s) 779, 1255
NsbI TGCGCA 1 cut(s) 1356
NsiI ATGCAT 2 cut(s) 544, 604
OliI CACNNNNGTG 1 cut(s) 786
PctI GAATGC 3 cut(s) 528, 955, 1160
PdmI GAANNNNTTC 1 cut(s) 1107
PfeI GAWTC 5 cut(s) 116, 359, 692, 761, 1365
PkrI GCNGC 7 cut(s) 6, 472, 928, 959, 1160, 1230, 1271
PleI GAGTC 2 cut(s) 786, 988
PpsI GAGTC 2 cut(s) 786, 988
PpuMI RGGWCCY 1 cut(s) 1195
PsiI TTATAA 1 cut(s) 657
Psp5II RGGWCCY 1 cut(s) 1195
Psp6I CCWGG 1 cut(s) 769
PspFI CCCAGC 1 cut(s) 1220
PspGI CCWGG 1 cut(s) 769
PspN4I GGNNCC 3 cut(s) 768, 1034, 1196
PspPI GGNCC 1 cut(s) 1195
PspPPI RGGWCCY 1 cut(s) 1195
PstI CTGCAG 1 cut(s) 9
PstNI CAGNNNCTG 1 cut(s) 229
PsuI RGATCY 2 cut(s) 349, 1032
PvuII CAGCTG 1 cut(s) 911
RsaI GTAC 1 cut(s) 768
RsaNI GTAC 1 cut(s) 767
RseI CAYNNNNRTG 3 cut(s) 249, 786, 938
SaqAI TTAA 6 cut(s) 44, 377, 420, 492, 666, 1181
SatI GCNGC 7 cut(s) 5, 471, 927, 958, 1159, 1229, 1270
Sau3AI GATC 6 cut(s) 261, 349, 411, 1032, 1114, 1200
Sau96I GGNCC 1 cut(s) 1195
SchI GAGTC 2 cut(s) 787, 989
ScrFI CCNGG 1 cut(s) 771
SduI GDGCHC 1 cut(s) 793
SfaNI GCATC 5 cut(s) 529, 589, 1058, 1215, 1327
SfcI CTRYAG 2 cut(s) 5, 442
SinI GGWCC 1 cut(s) 1195
SmiMI CAYNNNNRTG 3 cut(s) 249, 786, 938
Sse9I AATT 9 cut(s) 209, 307, 335, 451, 521, 638, 1189, 1298, 1326
SsiI CCGC 3 cut(s) 435, 1159, 1262
SspI AATATT 2 cut(s) 202, 670
SspMI CTAG 3 cut(s) 954, 1308, 1430
StyD4I CCNGG 1 cut(s) 769
TaaI ACNGT 4 cut(s) 225, 408, 1015, 1072
TaiI ACGT 2 cut(s) 830, 1042
TaqI TCGA 4 cut(s) 357, 426, 1111, 1293
TaqII GACCGA 1 cut(s) 879
TasI AATT 9 cut(s) 209, 307, 335, 451, 521, 638, 1189, 1298, 1326
TauI GCSGC 1 cut(s) 1161
TfiI GAWTC 5 cut(s) 116, 359, 692, 761, 1365
Tru1I TTAA 6 cut(s) 44, 377, 420, 492, 666, 1181
Tru9I TTAA 6 cut(s) 44, 377, 420, 492, 666, 1181
TscAI CASTG 3 cut(s) 139, 793, 1020
TseFI GTSAC 2 cut(s) 779, 1255
TseI GCWGC 6 cut(s) 4, 470, 926, 957, 1228, 1269
Tsp45I GTSAC 2 cut(s) 779, 1255
TspDTI ATGAA 5 cut(s) 71, 414, 471, 567, 709
TspRI CASTG 3 cut(s) 139, 793, 1020
VneI GTGCAC 1 cut(s) 789
VpaK11BI GGWCC 1 cut(s) 1195
XapI RAATTY 4 cut(s) 209, 307, 521, 1298
XmnI GAANNNNTTC 1 cut(s) 1107
XspI CTAG 3 cut(s) 954, 1308, 1430
Zsp2I ATGCAT 2 cut(s) 544, 604
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.