RLG00000036974

Aminopeptidase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Reverse (-)
87082889 .. 87085630
2742 bp
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UTR
Exon/CDS
Intron
RLM00000036974

Sequence Viewer

Length: 978 bp
ATGAATGCTGGGACAAGCAGAGCTACGAAGGAGTTGAAGCACCTGAAAGTTTTGAGGATGGCAGTGATTCACATAATGATGTTTGTGTTGAATCTGTACGAGTACGTGAAGAAGAACTTGGGGTCTCTGAGATTGATTGTGTGGACTGTGGATGTTGCTATGATCAATATTGTTGCTCCAATCTACTGGAGATTCGAAGGAGTGCCTGATGATTTCCTTGGTTTACTCGACACAAAGTTTAAGGAATCTCCAATCAGGTCAACTTGTTTGGTGGCTGTTGTTGTTGGCCTATTTGATCATATTGAAGATACAACATCTGATGGGGTAAAGGTTAGTGCATATTGCCCTGTTGGGAAAAGTGATAAAAGGGAAATTTCTTTAAATGTTGCTGTTAAGACCCTTGATCTTTTCTCCAAATACTTCTCAACGCCTTACTCACTCCCCAAACTTGATATGGTTGTGGTTCCTGAATTTTCTGGTGGGGCCATGGAGAATTATGGTTTGATCACATACTGTGAAATGGAACTGCTTTTTGATCCTTTGCATTCCACAGCAGCAAGAAAGCAAAGAATGGCAATTGTTGTATCACATGAAGTAGCACATCAGTGGTTTGGCAATCTGTTCTCTAATTTGTTTTATGCCTGCTTGGTCATGTTTTACGAGATAAGTTATATGGCCACTGATATTTTATTTCTTGAGTGGAAAGTTTGGTCTCAATTTCTTCAACAAACTACTGGTGGACTAATTATGGATGCGCTAGAACATTCACATCCAATTCAGGTAGATGTACACCACGCACGTTCAGTTCTTGAAATATTCGATGCTATCAGCTATAAAAAGGGATCTACTGTTATACGAATGATGCAGGCTTATCTTGGTGATGATATATTCCAGGTTGCTGGCGATGTTACAAAGATTGATATTCTGAAAGTCACCCACCTGTTGAGAAATGGCAGGCCAAGAATTGAGGCAAACTGA

Protein Analysis

326

Amino Acids

36.92

Weight (kDa)

6.41

Isoelectric Point (pI)

32.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
REF PF05755 9 - 83 1.9e-17 Rubber elongation factor protein (REF)
Peptidase_M1 PF01433 126 - 298 2.7e-48 Peptidase family M1 domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0000648)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 2 cut(s) 530, 850
AcoI YGGCCR 1 cut(s) 675
AcsI RAATTY 2 cut(s) 372, 470
AfaI GTAC 3 cut(s) 98, 104, 789
AgsI TTSAA 5 cut(s) 37, 91, 305, 725, 812
AjnI CCWGG 1 cut(s) 891
AjuI GAANNNNNNNTTGG 2 cut(s) 101, 133
AleI CACNNNNGTG 1 cut(s) 604
AluBI AGCT 2 cut(s) 23, 831
AluI AGCT 2 cut(s) 23, 831
Alw26I GTCTC 2 cut(s) 129, 717
AlwI GGATC 2 cut(s) 530, 850
AoxI GGCC 4 cut(s) 286, 483, 675, 956
ApeKI GCWGC 1 cut(s) 554
ApoI RAATTY 2 cut(s) 372, 470
AspLEI GCGC 1 cut(s) 757
AspS9I GGNCC 1 cut(s) 483
AsuHPI GGTGA 2 cut(s) 890, 925
AsuII TTCGAA 1 cut(s) 195
BalI TGGCCA 1 cut(s) 677
BbvI GCAGC 1 cut(s) 566
BccI CCATC 2 cut(s) 52, 314
BciT130I CCWGG 1 cut(s) 893
BclI TGATCA 3 cut(s) 162, 295, 504
BcoDI GTCTC 2 cut(s) 129, 717
BfaI CTAG 1 cut(s) 758
BisI GCNGC 1 cut(s) 555
BlsI GCNGC 1 cut(s) 556
Bme1390I CCNGG 1 cut(s) 893
BmgT120I GGNCC 1 cut(s) 483
BmiI GGNNCC 2 cut(s) 465, 484
BmrFI CCNGG 1 cut(s) 893
BmsI GCATC 3 cut(s) 742, 811, 852
BpmI CTGGAG 1 cut(s) 208
Bpu14I TTCGAA 1 cut(s) 195
BpuEI CTTGAG 1 cut(s) 716
BsaAI YACGTR 1 cut(s) 106
BsaI GGTCTC 2 cut(s) 129, 717
BsaJI CCNNGG 2 cut(s) 217, 486
Bse1I ACTGG 2 cut(s) 191, 739
BseBI CCWGG 1 cut(s) 893
BseDI CCNNGG 2 cut(s) 217, 486
BseGI GGATG 4 cut(s) 63, 157, 757, 769
BseMII CTCAG 1 cut(s) 119
BseNI ACTGG 2 cut(s) 191, 739
BseXI GCAGC 1 cut(s) 566
BseYI CCCAGC 1 cut(s) 8
BshFI GGCC 4 cut(s) 288, 485, 677, 958
BslFI GGGAC 1 cut(s) 25
BsmAI GTCTC 2 cut(s) 129, 717
BsmFI GGGAC 1 cut(s) 25
BsmI GAATGC 2 cut(s) 10, 544
BsnI GGCC 4 cut(s) 288, 485, 677, 958
Bso31I GGTCTC 2 cut(s) 129, 717
Bsp119I TTCGAA 1 cut(s) 195
Bsp1407I TGTACA 1 cut(s) 787
Bsp143I GATC 6 cut(s) 162, 295, 403, 504, 535, 842
Bsp19I CCATGG 1 cut(s) 486
BspANI GGCC 4 cut(s) 288, 485, 677, 958
BspCNI CTCAG 1 cut(s) 120
BspLI GGNNCC 2 cut(s) 465, 484
BspPI GGATC 2 cut(s) 530, 850
BspT104I TTCGAA 1 cut(s) 195
BspTNI GGTCTC 2 cut(s) 129, 717
BsrGI TGTACA 1 cut(s) 787
BsrI ACTGG 2 cut(s) 191, 739
BssECI CCNNGG 2 cut(s) 217, 486
BssMI GATC 6 cut(s) 162, 295, 403, 504, 535, 842
BssT1I CCWWGG 2 cut(s) 217, 486
Bst2UI CCWGG 1 cut(s) 893
Bst4CI ACNGT 3 cut(s) 148, 515, 850
BstAUI TGTACA 1 cut(s) 787
BstBAI YACGTR 1 cut(s) 106
BstBI TTCGAA 1 cut(s) 195
BstC8I GCNNGC 4 cut(s) 643, 867, 901, 956
BstDEI CTNAG 1 cut(s) 128
BstDSI CCRYGG 1 cut(s) 486
BstF5I GGATG 4 cut(s) 63, 157, 757, 769
BstHHI GCGC 1 cut(s) 757
BstKTI GATC 6 cut(s) 165, 298, 406, 507, 538, 845
BstMAI GTCTC 2 cut(s) 129, 717
BstMBI GATC 6 cut(s) 162, 295, 403, 504, 535, 842
BstNI CCWGG 1 cut(s) 893
BstSCI CCNGG 1 cut(s) 891
BstV1I GCAGC 1 cut(s) 566
BstX2I RGATCY 1 cut(s) 842
BstXI CCANNNNNNTGG 2 cut(s) 186, 899
BstYI RGATCY 1 cut(s) 842
BsuRI GGCC 4 cut(s) 288, 485, 677, 958
BtgI CCRYGG 1 cut(s) 486
BtgZI GCGATG 1 cut(s) 918
BtsCI GGATG 4 cut(s) 63, 157, 757, 769
BtsI GCAGTG 1 cut(s) 69
BtsIMutI CAGTG 3 cut(s) 69, 611, 678
Cac8I GCNNGC 4 cut(s) 643, 867, 901, 956
CfoI GCGC 1 cut(s) 757
Cfr13I GGNCC 1 cut(s) 483
Csp6I GTAC 3 cut(s) 97, 103, 788
CviAII CATG 3 cut(s) 487, 590, 652
CviJI RGCY 8 cut(s) 23, 275, 288, 485, 677, 831, 869, 958
CviKI_1 RGCY 8 cut(s) 23, 275, 288, 485, 677, 831, 869, 958
CviQI GTAC 3 cut(s) 97, 103, 788
DdeI CTNAG 1 cut(s) 128
DpnI GATC 6 cut(s) 164, 297, 405, 506, 537, 844
DpnII GATC 6 cut(s) 162, 295, 403, 504, 535, 842
DraI TTTAAA 1 cut(s) 381
EaeI YGGCCR 1 cut(s) 675
Eco130I CCWWGG 2 cut(s) 217, 486
Eco31I GGTCTC 2 cut(s) 129, 717
EcoRII CCWGG 1 cut(s) 891
EcoT14I CCWWGG 2 cut(s) 217, 486
ErhI CCWWGG 2 cut(s) 217, 486
FaeI CATG 3 cut(s) 490, 593, 655
FalI AAGNNNNNCTT 2 cut(s) 101, 133
FaqI GGGAC 1 cut(s) 25
FatI CATG 3 cut(s) 486, 589, 651
FbaI TGATCA 3 cut(s) 162, 295, 504
Fnu4HI GCNGC 1 cut(s) 555
FokI GGATG 4 cut(s) 70, 164, 756, 764
Fsp4HI GCNGC 1 cut(s) 555
FspBI CTAG 1 cut(s) 758
GlaI GCGC 1 cut(s) 756
GluI GCNGC 1 cut(s) 555
GsaI CCCAGC 1 cut(s) 12
GsuI CTGGAG 1 cut(s) 208
HaeIII GGCC 4 cut(s) 288, 485, 677, 958
HhaI GCGC 1 cut(s) 757
Hin1II CATG 3 cut(s) 490, 593, 655
Hin6I GCGC 1 cut(s) 755
HinP1I GCGC 1 cut(s) 755
HincII GTYRAC 1 cut(s) 261
HindII GTYRAC 1 cut(s) 261
HinfI GANTC 4 cut(s) 67, 91, 192, 245
HphI GGTGA 2 cut(s) 890, 925
Hpy166II GTNNAC 5 cut(s) 144, 224, 261, 740, 790
Hpy188I TCNGA 3 cut(s) 129, 319, 927
Hpy188III TCNNGA 3 cut(s) 467, 695, 809
Hpy8I GTNNAC 5 cut(s) 144, 224, 261, 740, 790
HpyAV CCTTC 2 cut(s) 22, 191
HpyCH4III ACNGT 3 cut(s) 148, 515, 850
HpyCH4IV ACGT 2 cut(s) 105, 799
HpyCH4V TGCA 3 cut(s) 338, 544, 865
HpyF3I CTNAG 1 cut(s) 128
HpySE526I ACGT 2 cut(s) 105, 799
Hsp92II CATG 3 cut(s) 490, 593, 655
HspAI GCGC 1 cut(s) 755
Ksp22I TGATCA 3 cut(s) 162, 295, 504
Kzo9I GATC 6 cut(s) 162, 295, 403, 504, 535, 842
LmnI GCTCC 1 cut(s) 181
Lsp1109I GCAGC 1 cut(s) 566
LweI GCATC 3 cut(s) 742, 811, 852
MaeI CTAG 1 cut(s) 758
MaeII ACGT 2 cut(s) 105, 799
MaeIII GTNAC 2 cut(s) 907, 931
MalI GATC 6 cut(s) 164, 297, 405, 506, 537, 844
MboI GATC 6 cut(s) 162, 295, 403, 504, 535, 842
MboII GAAGA 4 cut(s) 121, 124, 317, 713
MfeI CAATTG 1 cut(s) 576
MflI RGATCY 1 cut(s) 842
MlsI TGGCCA 1 cut(s) 677
MluCI AATT 9 cut(s) 372, 470, 493, 576, 628, 716, 744, 774, 963
MluNI TGGCCA 1 cut(s) 677
MnlI CCTC 2 cut(s) 48, 961
Mox20I TGGCCA 1 cut(s) 677
MscI TGGCCA 1 cut(s) 677
MseI TTAA 3 cut(s) 240, 380, 393
MslI CAYNNNNRTG 2 cut(s) 77, 604
Msp20I TGGCCA 1 cut(s) 677
MspR9I CCNGG 1 cut(s) 893
MunI CAATTG 1 cut(s) 576
Mva1269I GAATGC 2 cut(s) 10, 544
MvaI CCWGG 1 cut(s) 893
NcoI CCATGG 1 cut(s) 486
NdeII GATC 6 cut(s) 162, 295, 403, 504, 535, 842
NlaIII CATG 3 cut(s) 490, 593, 655
NlaIV GGNNCC 2 cut(s) 465, 484
NmuCI GTSAC 1 cut(s) 931
NspV TTCGAA 1 cut(s) 195
OliI CACNNNNGTG 1 cut(s) 604
PctI GAATGC 2 cut(s) 10, 544
PfeI GAWTC 4 cut(s) 67, 91, 192, 245
PkrI GCNGC 1 cut(s) 556
Ppu21I YACGTR 1 cut(s) 106
Psp6I CCWGG 1 cut(s) 891
PspFI CCCAGC 1 cut(s) 8
PspGI CCWGG 1 cut(s) 891
PspN4I GGNNCC 2 cut(s) 465, 484
PspPI GGNCC 1 cut(s) 483
PsuI RGATCY 1 cut(s) 842
RsaI GTAC 3 cut(s) 98, 104, 789
RsaNI GTAC 3 cut(s) 97, 103, 788
RseI CAYNNNNRTG 2 cut(s) 77, 604
SaqAI TTAA 3 cut(s) 240, 380, 393
SatI GCNGC 1 cut(s) 555
Sau3AI GATC 6 cut(s) 162, 295, 403, 504, 535, 842
Sau96I GGNCC 1 cut(s) 483
ScrFI CCNGG 1 cut(s) 893
SfaNI GCATC 3 cut(s) 742, 811, 852
SfuI TTCGAA 1 cut(s) 195
SmiMI CAYNNNNRTG 2 cut(s) 77, 604
SmlI CTYRAG 1 cut(s) 695
SmoI CTYRAG 1 cut(s) 695
Sse9I AATT 9 cut(s) 372, 470, 493, 576, 628, 716, 744, 774, 963
SspI AATATT 2 cut(s) 169, 816
SspMI CTAG 1 cut(s) 758
StyD4I CCNGG 1 cut(s) 891
StyI CCWWGG 2 cut(s) 217, 486
TaaI ACNGT 3 cut(s) 148, 515, 850
TaiI ACGT 2 cut(s) 108, 802
TaqI TCGA 3 cut(s) 195, 228, 819
TasI AATT 9 cut(s) 372, 470, 493, 576, 628, 716, 744, 774, 963
TatI WGTACW 1 cut(s) 787
TfiI GAWTC 4 cut(s) 67, 91, 192, 245
Tru1I TTAA 3 cut(s) 240, 380, 393
Tru9I TTAA 3 cut(s) 240, 380, 393
TscAI CASTG 3 cut(s) 69, 611, 685
TseFI GTSAC 1 cut(s) 931
TseI GCWGC 1 cut(s) 554
Tsp45I GTSAC 1 cut(s) 931
TspDTI ATGAA 2 cut(s) 17, 606
TspRI CASTG 3 cut(s) 69, 611, 685
XapI RAATTY 2 cut(s) 372, 470
XcmI CCANNNNNNNNNTGG 1 cut(s) 451
XspI CTAG 1 cut(s) 758
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.