pycom08g05560

aminopeptidase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr8
Physical Location & Seq
Forward (+)
4243165 .. 4244306
1142 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom08g05560.4

Sequence Viewer

Length: 726 bp
ATGAACAAAGATCTAATAAGTAAATTAAAGTATGGCAGACACAATTCTACTCAAGCGGTTCCCAAGGTGATGGGCAATGGATTGTGCCGATCACATTATCCTGTGTCTGAAACTCTTGACATAAAGGAATATCTGGGTTGCTCAGTGGGAAAGGCTGGATGTGGAGGCACAAGCAACAAAGACAATGCTTTATGCAGTTGGATAAAAGTCAATGTGGATCAGACTGGTTTTTACAGAGTGAAATATGAGGATGAGCTTGCAGCTGCGCTTAGAAACGCTATCGAAAAGAAGCAATTGTCTGAAACTGACAGATTTGGCATTTTGGATGATTCCTTTGCCCTGTCAATGGCTCGCAGGCAGTCTTTTGCTTCATTGCTTACCTTGTTGAGTGCATACAGAGAGGAACTTGACTATATCGTGCTGTCAAATTTGATTACTATAAGTTATAATCTGGCAAGAATTGCAGCGGATGCTGTACCCGGACTACTGGATCACATTAAACAATTCTTTATTGGACTTTTCCAGTATTCTGCGGAGAGGCTTGGTTGGCAGCCTAAACCAGGCGAAAGCCATTTAGATGCAATGTTGAGAGGAGAAATTTTGACTGCACTTGCTGTTTTTGGTCATGACCTGACGTTAGATGAAGCAAGTAGGCGTTTTCATGCCTTCATAGAAGACAGAAACACGCCCCTCCTTCCCCCAGACATTAGAAAGATGTGGCTGTAA

Protein Analysis

242

Amino Acids

27.06

Weight (kDa)

7.01

Isoelectric Point (pI)

41.95

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0000648)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 447
AciI CCGC 3 cut(s) 56, 467, 533
AclWI GGATC 2 cut(s) 225, 498
AcsI RAATTY 2 cut(s) 427, 597
AfaI GTAC 1 cut(s) 477
AfiI CCNNNNNNNGG 2 cut(s) 346, 560
AjnI CCWGG 1 cut(s) 559
AluBI AGCT 2 cut(s) 256, 263
AluI AGCT 2 cut(s) 256, 263
AlwI GGATC 2 cut(s) 225, 498
ApeKI GCWGC 4 cut(s) 260, 263, 464, 550
ApoI RAATTY 2 cut(s) 427, 597
AspLEI GCGC 1 cut(s) 268
AsuC2I CCSGG 1 cut(s) 480
AsuHPI GGTGA 1 cut(s) 79
BbsI GAAGAC 1 cut(s) 681
BbvI GCAGC 4 cut(s) 250, 272, 476, 562
BccI CCATC 1 cut(s) 64
BciT130I CCWGG 1 cut(s) 561
BcnI CCSGG 1 cut(s) 480
BglII AGATCT 1 cut(s) 10
BisI GCNGC 4 cut(s) 261, 264, 465, 551
BlsI GCNGC 4 cut(s) 262, 265, 466, 552
Bme1390I CCNGG 2 cut(s) 480, 561
BmiI GGNNCC 1 cut(s) 60
BmrFI CCNGG 2 cut(s) 480, 561
BmsI GCATC 2 cut(s) 460, 568
BpiI GAAGAC 1 cut(s) 681
BpuEI CTTGAG 1 cut(s) 36
BpuMI CCSGG 1 cut(s) 480
BsaJI CCNNGG 1 cut(s) 63
Bsc4I CCNNNNNNNGG 2 cut(s) 346, 560
Bse1I ACTGG 3 cut(s) 229, 492, 523
Bse3DI GCAATG 3 cut(s) 82, 371, 588
BseBI CCWGG 1 cut(s) 561
BseDI CCNNGG 1 cut(s) 63
BseGI GGATG 4 cut(s) 164, 256, 331, 475
BseLI CCNNNNNNNGG 2 cut(s) 346, 560
BseMI GCAATG 3 cut(s) 82, 371, 588
BseMII CTCAG 1 cut(s) 156
BseNI ACTGG 3 cut(s) 229, 492, 523
BseRI GAGGAG 1 cut(s) 606
BseXI GCAGC 4 cut(s) 250, 272, 476, 562
BsgI GTGCAG 1 cut(s) 591
BsiSI CCGG 1 cut(s) 480
BslI CCNNNNNNNGG 2 cut(s) 346, 560
Bsp143I GATC 4 cut(s) 10, 89, 217, 490
BspACI CCGC 3 cut(s) 56, 467, 533
BspCNI CTCAG 1 cut(s) 155
BspHI TCATGA 1 cut(s) 625
BspLI GGNNCC 1 cut(s) 60
BspPI GGATC 2 cut(s) 225, 498
BsrDI GCAATG 3 cut(s) 82, 371, 588
BsrI ACTGG 3 cut(s) 229, 492, 523
BssECI CCNNGG 1 cut(s) 63
BssMI GATC 4 cut(s) 10, 89, 217, 490
BssT1I CCWWGG 1 cut(s) 63
Bst2UI CCWGG 1 cut(s) 561
BstAPI GCANNNNNTGC 2 cut(s) 461, 470
BstC8I GCNNGC 3 cut(s) 258, 352, 356
BstDEI CTNAG 2 cut(s) 142, 269
BstENI CCTNNNNNAGG 1 cut(s) 558
BstF5I GGATG 4 cut(s) 164, 256, 331, 475
BstHHI GCGC 1 cut(s) 268
BstKTI GATC 4 cut(s) 13, 92, 220, 493
BstMBI GATC 4 cut(s) 10, 89, 217, 490
BstMWI GCNNNNNNNGC 3 cut(s) 461, 470, 547
BstNI CCWGG 1 cut(s) 561
BstSCI CCNGG 2 cut(s) 478, 559
BstV1I GCAGC 4 cut(s) 250, 272, 476, 562
BstV2I GAAGAC 1 cut(s) 681
BstX2I RGATCY 1 cut(s) 10
BstXI CCANNNNNNTGG 1 cut(s) 70
BstYI RGATCY 1 cut(s) 10
BtsCI GGATG 4 cut(s) 164, 256, 331, 475
BtsIMutI CAGTG 1 cut(s) 150
Cac8I GCNNGC 3 cut(s) 258, 352, 356
CciI TCATGA 1 cut(s) 625
CfoI GCGC 1 cut(s) 268
Csp6I GTAC 1 cut(s) 476
CviAII CATG 2 cut(s) 626, 662
CviJI RGCY 8 cut(s) 155, 256, 263, 350, 541, 553, 570, 721
CviKI_1 RGCY 8 cut(s) 155, 256, 263, 350, 541, 553, 570, 721
CviQI GTAC 1 cut(s) 476
DdeI CTNAG 2 cut(s) 142, 269
DpnI GATC 4 cut(s) 12, 91, 219, 492
DpnII GATC 4 cut(s) 10, 89, 217, 490
Eco130I CCWWGG 1 cut(s) 63
EcoNI CCTNNNNNAGG 1 cut(s) 558
EcoRII CCWGG 1 cut(s) 559
EcoT14I CCWWGG 1 cut(s) 63
ErhI CCWWGG 1 cut(s) 63
FaeI CATG 2 cut(s) 629, 665
FatI CATG 2 cut(s) 625, 661
Fnu4HI GCNGC 4 cut(s) 261, 264, 465, 551
FokI GGATG 4 cut(s) 171, 263, 338, 482
Fsp4HI GCNGC 4 cut(s) 261, 264, 465, 551
GlaI GCGC 1 cut(s) 267
GluI GCNGC 4 cut(s) 261, 264, 465, 551
HapII CCGG 1 cut(s) 480
HhaI GCGC 1 cut(s) 268
Hin1II CATG 2 cut(s) 629, 665
Hin6I GCGC 1 cut(s) 266
HinP1I GCGC 1 cut(s) 266
HinfI GANTC 1 cut(s) 329
HpaII CCGG 1 cut(s) 480
HphI GGTGA 1 cut(s) 79
Hpy188I TCNGA 3 cut(s) 109, 222, 301
Hpy188III TCNNGA 2 cut(s) 116, 626
HpyAV CCTTC 2 cut(s) 676, 704
HpyCH4IV ACGT 1 cut(s) 635
HpyCH4V TGCA 6 cut(s) 195, 260, 392, 464, 581, 608
HpyF10VI GCNNNNNNNGC 3 cut(s) 461, 470, 547
HpyF3I CTNAG 2 cut(s) 142, 269
HpySE526I ACGT 1 cut(s) 635
Hsp92II CATG 2 cut(s) 629, 665
HspAI GCGC 1 cut(s) 266
Kzo9I GATC 4 cut(s) 10, 89, 217, 490
Lsp1109I GCAGC 4 cut(s) 250, 272, 476, 562
LweI GCATC 2 cut(s) 460, 568
MaeII ACGT 1 cut(s) 635
MalI GATC 4 cut(s) 12, 91, 219, 492
MboI GATC 4 cut(s) 10, 89, 217, 490
MboII GAAGA 1 cut(s) 686
MfeI CAATTG 1 cut(s) 293
MflI RGATCY 1 cut(s) 10
MluCI AATT 7 cut(s) 23, 43, 293, 427, 459, 503, 597
MmeI TCCRAC 1 cut(s) 179
MnlI CCTC 6 cut(s) 158, 241, 394, 531, 584, 701
MseI TTAA 2 cut(s) 26, 498
MslI CAYNNNNRTG 1 cut(s) 576
MspA1I CMGCKG 2 cut(s) 263, 467
MspI CCGG 1 cut(s) 480
MspR9I CCNGG 2 cut(s) 480, 561
MunI CAATTG 1 cut(s) 293
MvaI CCWGG 1 cut(s) 561
MwoI GCNNNNNNNGC 3 cut(s) 461, 470, 547
NciI CCSGG 1 cut(s) 480
NdeII GATC 4 cut(s) 10, 89, 217, 490
NlaIII CATG 2 cut(s) 629, 665
NlaIV GGNNCC 1 cut(s) 60
PagI TCATGA 1 cut(s) 625
PfeI GAWTC 1 cut(s) 329
PkrI GCNGC 4 cut(s) 262, 265, 466, 552
PsiI TTATAA 1 cut(s) 447
Psp6I CCWGG 1 cut(s) 559
PspGI CCWGG 1 cut(s) 559
PspN4I GGNNCC 1 cut(s) 60
PsuI RGATCY 1 cut(s) 10
PvuII CAGCTG 1 cut(s) 263
RsaI GTAC 1 cut(s) 477
RsaNI GTAC 1 cut(s) 476
RseI CAYNNNNRTG 1 cut(s) 576
SaqAI TTAA 2 cut(s) 26, 498
SatI GCNGC 4 cut(s) 261, 264, 465, 551
Sau3AI GATC 4 cut(s) 10, 89, 217, 490
ScrFI CCNGG 2 cut(s) 480, 561
SetI ASST 6 cut(s) 69, 258, 265, 383, 633, 638
SfaNI GCATC 2 cut(s) 460, 568
SmiMI CAYNNNNRTG 1 cut(s) 576
SmlI CTYRAG 1 cut(s) 51
SmoI CTYRAG 1 cut(s) 51
Sse9I AATT 7 cut(s) 23, 43, 293, 427, 459, 503, 597
SsiI CCGC 3 cut(s) 56, 467, 533
StyD4I CCNGG 2 cut(s) 478, 559
StyI CCWWGG 1 cut(s) 63
TaiI ACGT 1 cut(s) 638
TaqI TCGA 1 cut(s) 282
TasI AATT 7 cut(s) 23, 43, 293, 427, 459, 503, 597
TfiI GAWTC 1 cut(s) 329
Tru1I TTAA 2 cut(s) 26, 498
Tru9I TTAA 2 cut(s) 26, 498
TscAI CASTG 1 cut(s) 150
TseI GCWGC 4 cut(s) 260, 263, 464, 550
TspDTI ATGAA 5 cut(s) 17, 360, 650, 657, 658
TspRI CASTG 1 cut(s) 150
XagI CCTNNNNNAGG 1 cut(s) 558
XapI RAATTY 2 cut(s) 427, 597
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.