Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2C

Orthogroup ID

OG0000648

Physical Location & Seq

Genomic Coordinates Reverse (-)

58036569 .. 58041796

Gene Structure 5228 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2CG427000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1884 bp

ATGGAACAGAAGCAAGGCATAGAGCAATTTAAAGGCCAAGCAAGGTTACCGAATTTTGCAATCCCGAAACGCTATGATCTTCATCTCAAACTTGATCTCTCTGCCTGCACCTTCTCCGGCACCGTGCAGATTAACGTTAGCATCGTTGAAGAGACCAAGTTTCTTGTCTTGAACGCTCTTGAACTTGATGTTCATCAAGTTTGGTTCACCAACTCTCACGGCCAAAAGTACCACCCCTGCGATGTTGTTTTGGATGGAGATGATGAAGTTCTTGTTTTGGTATTTGATAAAGCACTTGGTATTGGTGAGGGAGTCTTGGCGGTTGACTTTTCTGCAGTCCTTAATGCGCACTTGGAGGGGTTCTATAAATGTGCTTATATGGATGGGGAAGAGAAAAAGAATATGGCTGTTACTCAATTCGAAGCTGTGGATGCGAGGAGGTGCTTTCCATGTTGGGATGAACCTGCTCTCAAGAAATCGTTAAGTTCCTACATAAAAAGATATTCTGAAAAAAATGCAAAGACAGAAGATTTATGGAGTGTTCTGTCGGAGGAATCTGGTCTCAAAATCAGTGAAATGATGGATGATTGGACTAAGAAACAAGGATATCCTGTGATCTCTGTAACAGCAAAGGATCATATTTTGGAATTTGAGCAGACACAGTTTCTGTCAGCAGGTTTGCTTAGTGAAGGGAAATGGATTGTTCCAGTAACTATTTCACTCGGTTCATATGAGAGACGCAAGAATTTCCTTTTGGAAACAAAGTCCAGTGAAGTGGACATATCAGATCTTGTTGACACTTCTGATACTAATTTAAAGAGTAAAGAGACATGTGATGAACAACTGTGGGTCAAGGTTAATATCGAGCAGAGTGGTTTTTATAGGGTAAAATATGAAGATAAGCTAGCAGCTCGACTTAGGAAGGCTATTGAGCATAATAGCTTGGAAGCAACAGACAAATTTGGTATTCTGGATGATGCATACGCCCTTTGCGAAGCTTGTGAACAGTCACTATCATCTTTGCTTTCCTTGATGGATGTATACAGAAAAGAAGCTGATTATATTGTCTTATCAAAACTTATAGACGTATGTTATAACATTGTTAAAGTATCAAGCGAGGCCATCCCTGATTCAGTGAATGAGTTGAAGCAATTTTGCATCAATCTCCTCATGTTTCCATCAGAAAAATTAGGCTGGGAACCAGTACCTGGAGAGAGTCACTTCAGTACACTTTTGAGAGCAGAAGTCTTGCAGGCCTTGGTTACATTTGGCCATGATAAAACTCAGAATGAAGCATTAGATCGATTTCAGAAATTATTGAATGATAGAAACACTCCGCTTCTTACTGCAGATACAAGAGCGGCTGCTTACATTGCAATGATGAGGAATGCTGGCAGCTCACACAAGGAAGGCCTTGAGTCACTATTAAATGTTTACAGAGAAGCTGGTACAGTGCAAGAGAAGGAACGAATTCTACGTTATTTTGCATCTTCTCCAGACCCAGATACAGTTGTTGATGTTTTGAACTTTTTCTTATCTGATGAGGTTCGAGATCAGGACATTATATTTGCACTCCCTGGTATAAGCTTAGAATGCCGTGAAACAGCATGGAAATGGACCAAGGAGAACTGGGACCTGATCCTCACCAAGTATGGTGCTGGATTGCTACTCACCCGTTTCGTAAGAGACGTTGTAACACCGTTTTGTAGCAATGAAAAGGCTGATGAGGTTGAAGAATTTTTCGCAAGCCGGGTGCATCCTTCCATTGCTATGACTCTGAAGCAAAGCATTGAGCACGTCCGAATCAAGGCGAGGTGGGTTCAAAGCGCAAGGCAGGAGCAATCTCTTCAAGAACTAGTCAAAGAGTTGGCAGGCAAGAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001666 GO:0003674 GO:0003824 GO:0004177 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006508 GO:0006518 GO:0006807 GO:0006950 GO:0008150 GO:0008152 GO:0008233 GO:0008235 GO:0008237 GO:0008238 GO:0008270 GO:0009056 GO:0009628 GO:0009987 GO:0016787 GO:0019538 GO:0033218 GO:0033554 GO:0034641 GO:0036293 GO:0036294 GO:0042221 GO:0042277 GO:0043167 GO:0043169 GO:0043170 GO:0043171 GO:0043603 GO:0044237 GO:0044238 GO:0044248 GO:0044424 GO:0044444 GO:0044464 GO:0046872 GO:0046914 GO:0050896 GO:0051716 GO:0070006 GO:0070011 GO:0070482 GO:0070887 GO:0071453 GO:0071456 GO:0071704 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ERAP1_C Peptidase_M1

Protein Analysis

627

Amino Acids

71.21

Weight (kDa)

5.11

Isoelectric Point (pI)

37.92

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Peptidase_M1_N	PF17900	22 - 165	7.4e-32	Peptidase M1 N-terminal domain
Peptidase_M1	PF01433	155 - 197	8.1e-07	Peptidase family M1 domain
ERAP1_C	PF11838	283 - 601	2e-74	ERAP1-like C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000648)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G33090
fragaria_vesca	FvH4_2g31431 FvH4_2g31440 FvH4_6g34250 FvH4_6g34262 FvH4_6g34263
malus_domestica	MD08G1066400.v1.1 MD08G1066500.v1.1 MD08G1067400.v1.1 MD09G1070300.v1.1 MD09G1187200.v1.1 MD10G1090900.v1.1 MD15G1054400.v1.1 MD17G1171400.v1.1
prunus_persica	Prupe.1G407900_v2.0.a1 Prupe.1G408000_v2.0.a1 Prupe.1G408000_v2.0.a1 Prupe.1G408000_v2.0.a1 Prupe.1G457300_v2.0.a1 Prupe.3G044500_v2.0.a1 Prupe.3G044500_v2.0.a1
pyrus_communis	pycom08g05520 pycom08g05550 pycom08g05560 pycom08g05590 pycom09g10370 pycom09g10380 pycom10g07440 pycom10g07460 pycom15g05130 pycom15g05150 pycom17g16900
rosa_chinensis	RchiOBHm_Chr2g0144571 RchiOBHm_Chr2g0144611 RchiOBHm_Chr4g0390591 RchiOBHm_Chr6g0311371 RchiOBHm_Chr6g0311381
rosa_laevigata	RLG00000009010 RLG00000009289 RLG00000010411 RLG00000010412 RLG00000020090 RLG00000020092 RLG00000036974
rosa_multiflora	Rmu_co8212940.1_g000001 Rmu_sc0005789.1_g000001 Rmu_sc0008536.1_g000010 Rmu_sc0008536.1_g000011 Rmu_sc0009300.1_g000002
rosa_roxburghii	Rroxscaffold_1G00056400 Rroxscaffold_2G00084720 Rroxscaffold_2G00101200 Rroxscaffold_7G00157670 Rroxscaffold_7G00157680
rosa_rugosa	Rorug02G0387900 Rorug02G0388000 Rorug02G0388100 Rorug06G0388300 Rorug06G0388400
rosa_samantha	Rh2AG440000 Rh2AG440100 Rh2BG450000 Rh2BG450300 Rh2BG450500 Rh2CG427000 Rh2CG427200 Rh2DG459900 Rh2DG460300 Rh2DG460500 Rh6AG502600 Rh6AG502700 Rh6BG513300 Rh6CG519100 Rh6CG519200
rosa_wichuraiana	Rw2G036000 Rw6G043770 Rw6G043780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1095
Acc16I	TGCGCA	1 cut(s)	348
Acc36I	ACCTGC	2 cut(s)	472, 665
AccB1I	GGYRCC	1 cut(s)	119
AccB7I	CCANNNNNTGG	1 cut(s)	1208
AccBSI	CCGCTC	1 cut(s)	1361
AccI	GTMKAC	1 cut(s)	1041
AciI	CCGC	3 cut(s)	320, 1337, 1361
AclI	AACGTT	1 cut(s)	135
AclWI	GGATC	2 cut(s)	642, 1633
AcoI	YGGCCR	2 cut(s)	220, 1270
AcsI	RAATTY	6 cut(s)	52, 647, 745, 959, 1470, 1736
AcuI	CTGAAG	2 cut(s)	1207, 1799
AfaI	GTAC	4 cut(s)	230, 1206, 1228, 1450
AfiI	CCNNNNNNNGG	2 cut(s)	1208, 1807
AflIII	ACRYGT	1 cut(s)	830
AgsI	TTSAA	9 cut(s)	149, 172, 182, 1147, 1321, 1525, 1733, 1823, 1850
AhlI	ACTAGT	1 cut(s)	1855
AjiI	CACGTC	1 cut(s)	1798
AjnI	CCWGG	2 cut(s)	1207, 1576
AjuI	GAANNNNNNNTTGG	2 cut(s)	737, 769
AluBI	AGCT	9 cut(s)	425, 904, 911, 942, 998, 1055, 1398, 1445, 1587
AluI	AGCT	9 cut(s)	425, 904, 911, 942, 998, 1055, 1398, 1445, 1587
Alw21I	GWGCWC	1 cut(s)	1797
Alw26I	GTCTC	5 cut(s)	146, 566, 730, 821, 1680
AlwI	GGATC	2 cut(s)	642, 1633
AlwNI	CAGNNNCTG	2 cut(s)	667, 1208
AoxI	GGCC	6 cut(s)	34, 220, 1119, 1254, 1270, 1411
ApeKI	GCWGC	3 cut(s)	908, 1364, 1395
ApoI	RAATTY	6 cut(s)	52, 647, 745, 959, 1470, 1736
ArsI	GACNNNNNNTTYG	2 cut(s)	1550, 1582
Asp700I	GAANNNNTTC	2 cut(s)	1470, 1529
AspLEI	GCGC	2 cut(s)	349, 1829
AspS9I	GGNCC	2 cut(s)	1617, 1633
AsuC2I	CCSGG	1 cut(s)	1751
AsuHPI	GGTGA	4 cut(s)	199, 317, 1636, 1663
AsuII	TTCGAA	1 cut(s)	420
AsuNHI	GCTAGC	1 cut(s)	904
AvaII	GGWCC	2 cut(s)	1617, 1633
BaeI	ACNNNNGTAYC	2 cut(s)	1497, 1530
BalI	TGGCCA	1 cut(s)	1272
BanI	GGYRCC	1 cut(s)	119
Bbv12I	GWGCWC	1 cut(s)	1797
BbvI	GCAGC	3 cut(s)	920, 1351, 1407
BccI	CCATC	6 cut(s)	248, 377, 574, 1027, 1130, 1186
BceAI	ACGGC	2 cut(s)	235, 1581
BciT130I	CCWGG	2 cut(s)	1209, 1578
BcnI	CCSGG	1 cut(s)	1751
BcoDI	GTCTC	5 cut(s)	146, 566, 730, 821, 1680
BcuI	ACTAGT	1 cut(s)	1855
BfaI	CTAG	2 cut(s)	905, 1856
BfmI	CTRYAG	2 cut(s)	333, 1347
BfuAI	ACCTGC	2 cut(s)	472, 665
BglII	AGATCT	1 cut(s)	787
BisI	GCNGC	4 cut(s)	909, 1362, 1365, 1396
BlsI	GCNGC	4 cut(s)	910, 1363, 1366, 1397
Bme1390I	CCNGG	3 cut(s)	1209, 1578, 1751
Bme18I	GGWCC	2 cut(s)	1617, 1633
BmgBI	CACGTC	1 cut(s)	1798
BmgT120I	GGNCC	2 cut(s)	1617, 1633
BmiI	GGNNCC	3 cut(s)	121, 1200, 1634
BmrFI	CCNGG	3 cut(s)	1209, 1578, 1751
BmrI	ACTGGG	1 cut(s)	1639
BmsI	GCATC	6 cut(s)	150, 421, 967, 1167, 1496, 1765
BmtI	GCTAGC	1 cut(s)	908
BmuI	ACTGGG	1 cut(s)	1639
BpmI	CTGGAG	2 cut(s)	1230, 1479
Bpu14I	TTCGAA	1 cut(s)	420
BpuEI	CTTGAG	2 cut(s)	455, 1436
BpuMI	CCSGG	1 cut(s)	1751
Bsa29I	ATCGAT	1 cut(s)	1303
BsaBI	GATNNNNATC	2 cut(s)	81, 192
BsaI	GGTCTC	2 cut(s)	146, 566
BsaJI	CCNNGG	3 cut(s)	1257, 1576, 1620
Bsc4I	CCNNNNNNNGG	2 cut(s)	1208, 1807
Bse1I	ACTGG	4 cut(s)	707, 768, 1202, 1634
Bse3DI	GCAATG	4 cut(s)	1371, 1383, 1717, 1764
Bse8I	GATNNNNATC	2 cut(s)	81, 192
BseBI	CCWGG	2 cut(s)	1209, 1578
BseCI	ATCGAT	1 cut(s)	1303
BseDI	CCNNGG	3 cut(s)	1257, 1576, 1620
BseGI	GGATG	9 cut(s)	259, 388, 436, 463, 589, 979, 1042, 1122, 1756
BseJI	GATNNNNATC	2 cut(s)	81, 192
BseLI	CCNNNNNNNGG	2 cut(s)	1208, 1807
BseMI	GCAATG	4 cut(s)	1371, 1383, 1717, 1764
BseMII	CTCAG	1 cut(s)	1298
BseNI	ACTGG	4 cut(s)	707, 768, 1202, 1634
BseRI	GAGGAG	2 cut(s)	451, 1157
BseXI	GCAGC	3 cut(s)	920, 1351, 1407
BseYI	CCCAGC	1 cut(s)	1194
BsgI	GTGCAG	2 cut(s)	91, 146
BshFI	GGCC	6 cut(s)	36, 222, 1121, 1256, 1272, 1413
BshNI	GGYRCC	1 cut(s)	119
BshVI	ATCGAT	1 cut(s)	1303
BsiHKAI	GWGCWC	1 cut(s)	1797
BsiSI	CCGG	2 cut(s)	117, 1750
BslFI	GGGAC	1 cut(s)	1646
BslI	CCNNNNNNNGG	2 cut(s)	1208, 1807
BsmAI	GTCTC	5 cut(s)	146, 566, 730, 821, 1680
BsmBI	CGTCTC	2 cut(s)	730, 1680
BsmFI	GGGAC	1 cut(s)	1646
BsmI	GAATGC	2 cut(s)	1393, 1598
BsnI	GGCC	6 cut(s)	36, 222, 1121, 1256, 1272, 1413
Bso31I	GGTCTC	2 cut(s)	146, 566
Bsp119I	TTCGAA	1 cut(s)	420
Bsp1286I	GDGCHC	1 cut(s)	1797
Bsp143I	GATC	8 cut(s)	76, 94, 615, 634, 787, 1300, 1552, 1638
BspACI	CCGC	3 cut(s)	320, 1337, 1361
BspANI	GGCC	6 cut(s)	36, 222, 1121, 1256, 1272, 1413
BspCNI	CTCAG	1 cut(s)	1297
BspDI	ATCGAT	1 cut(s)	1303
BspLI	GGNNCC	3 cut(s)	121, 1200, 1634
BspMAI	CTGCAG	2 cut(s)	337, 1351
BspMI	ACCTGC	2 cut(s)	472, 665
BspOI	GCTAGC	1 cut(s)	908
BspPI	GGATC	2 cut(s)	642, 1633
BspT104I	TTCGAA	1 cut(s)	420
BspT107I	GGYRCC	1 cut(s)	119
BspTNI	GGTCTC	2 cut(s)	146, 566
BsrBI	CCGCTC	1 cut(s)	1361
BsrDI	GCAATG	4 cut(s)	1371, 1383, 1717, 1764
BsrI	ACTGG	4 cut(s)	707, 768, 1202, 1634
BssECI	CCNNGG	3 cut(s)	1257, 1576, 1620
BssMI	GATC	8 cut(s)	76, 94, 615, 634, 787, 1300, 1552, 1638
BssNAI	GTATAC	1 cut(s)	1042
BssT1I	CCWWGG	2 cut(s)	1257, 1620
Bst1107I	GTATAC	1 cut(s)	1042
Bst2UI	CCWGG	2 cut(s)	1209, 1578
Bst4CI	ACNGT	7 cut(s)	124, 663, 846, 1008, 1453, 1510, 1701
Bst6I	CTCTTC	3 cut(s)	144, 384, 1851
BstBI	TTCGAA	1 cut(s)	420
BstC8I	GCNNGC	6 cut(s)	106, 906, 1254, 1393, 1747, 1873
BstDEI	CTNAG	5 cut(s)	594, 683, 917, 1284, 1588
BstEII	GGTNACC	1 cut(s)	45
BstF5I	GGATG	9 cut(s)	259, 388, 436, 463, 589, 979, 1042, 1122, 1756
BstHHI	GCGC	2 cut(s)	349, 1829
BstKTI	GATC	8 cut(s)	79, 97, 618, 637, 790, 1303, 1555, 1641
BstMAI	GTCTC	5 cut(s)	146, 566, 730, 821, 1680
BstMBI	GATC	8 cut(s)	76, 94, 615, 634, 787, 1300, 1552, 1638
BstMWI	GCNNNNNNNGC	3 cut(s)	431, 1373, 1593
BstNI	CCWGG	2 cut(s)	1209, 1578
BstNSI	RCATGY	1 cut(s)	834
BstPI	GGTNACC	1 cut(s)	45
BstSCI	CCNGG	3 cut(s)	1207, 1576, 1749
BstSFI	CTRYAG	2 cut(s)	333, 1347
BstV1I	GCAGC	3 cut(s)	920, 1351, 1407
BstX2I	RGATCY	1 cut(s)	787
BstXI	CCANNNNNNTGG	1 cut(s)	775
BstYI	RGATCY	1 cut(s)	787
BstZ17I	GTATAC	1 cut(s)	1042
Bsu15I	ATCGAT	1 cut(s)	1303
BsuRI	GGCC	6 cut(s)	36, 222, 1121, 1256, 1272, 1413
BsuTUI	ATCGAT	1 cut(s)	1303
BtgZI	GCGATG	1 cut(s)	255
BtrI	CACGTC	1 cut(s)	1798
BtsCI	GGATG	9 cut(s)	259, 388, 436, 463, 589, 979, 1042, 1122, 1756
BtsIMutI	CAGTG	4 cut(s)	577, 775, 1140, 1458
BveI	ACCTGC	2 cut(s)	472, 665
Cac8I	GCNNGC	6 cut(s)	106, 906, 1254, 1393, 1747, 1873
CaiI	CAGNNNCTG	2 cut(s)	667, 1208
CfoI	GCGC	2 cut(s)	349, 1829
Cfr13I	GGNCC	2 cut(s)	1617, 1633
ClaI	ATCGAT	1 cut(s)	1303
CseI	GACGC	1 cut(s)	747
Csp6I	GTAC	4 cut(s)	229, 1205, 1227, 1449
CviAII	CATG	5 cut(s)	450, 831, 1171, 1274, 1608
CviQI	GTAC	4 cut(s)	229, 1205, 1227, 1449
DdeI	CTNAG	5 cut(s)	594, 683, 917, 1284, 1588
DpnI	GATC	8 cut(s)	78, 96, 617, 636, 789, 1302, 1554, 1640
DpnII	GATC	8 cut(s)	76, 94, 615, 634, 787, 1300, 1552, 1638
DraI	TTTAAA	2 cut(s)	31, 816
EaeI	YGGCCR	2 cut(s)	220, 1270
Eam1104I	CTCTTC	3 cut(s)	144, 384, 1851
EarI	CTCTTC	3 cut(s)	144, 384, 1851
Eco130I	CCWWGG	2 cut(s)	1257, 1620
Eco147I	AGGCCT	2 cut(s)	1256, 1413
Eco31I	GGTCTC	2 cut(s)	146, 566
Eco32I	GATATC	1 cut(s)	608
Eco47I	GGWCC	2 cut(s)	1617, 1633
Eco57I	CTGAAG	2 cut(s)	1207, 1799
Eco91I	GGTNACC	1 cut(s)	45
EcoO109I	RGGNCCY	1 cut(s)	1633
EcoO65I	GGTNACC	1 cut(s)	45
EcoRI	GAATTC	1 cut(s)	1470
EcoRII	CCWGG	2 cut(s)	1207, 1576
EcoRV	GATATC	1 cut(s)	608
EcoT14I	CCWWGG	2 cut(s)	1257, 1620
EcoT22I	ATGCAT	1 cut(s)	982
ErhI	CCWWGG	2 cut(s)	1257, 1620
Esp3I	CGTCTC	2 cut(s)	730, 1680
FaeI	CATG	5 cut(s)	453, 834, 1174, 1277, 1611
FaqI	GGGAC	1 cut(s)	1646
FatI	CATG	5 cut(s)	449, 830, 1170, 1273, 1607
FauNDI	CATATG	1 cut(s)	730
FblI	GTMKAC	1 cut(s)	1041
Fnu4HI	GCNGC	4 cut(s)	909, 1362, 1365, 1396
FokI	GGATG	9 cut(s)	266, 395, 443, 470, 596, 986, 1049, 1109, 1743
Fsp4HI	GCNGC	4 cut(s)	909, 1362, 1365, 1396
FspAI	RTGCGCAY	1 cut(s)	348
FspBI	CTAG	2 cut(s)	905, 1856
FspI	TGCGCA	1 cut(s)	348
GlaI	GCGC	2 cut(s)	348, 1828
GluI	GCNGC	4 cut(s)	909, 1362, 1365, 1396
GsaI	CCCAGC	1 cut(s)	1198
GsuI	CTGGAG	2 cut(s)	1230, 1479
HaeIII	GGCC	6 cut(s)	36, 222, 1121, 1256, 1272, 1413
HapII	CCGG	2 cut(s)	117, 1750
HgaI	GACGC	1 cut(s)	747
HhaI	GCGC	2 cut(s)	349, 1829
Hin1II	CATG	5 cut(s)	453, 834, 1174, 1277, 1611
Hin6I	GCGC	2 cut(s)	347, 1827
HinP1I	GCGC	2 cut(s)	347, 1827
HincII	GTYRAC	2 cut(s)	325, 796
HindII	GTYRAC	2 cut(s)	325, 796
HindIII	AAGCTT	2 cut(s)	996, 1585
HinfI	GANTC	7 cut(s)	312, 554, 1130, 1216, 1418, 1774, 1803
HpaII	CCGG	2 cut(s)	117, 1750
HphI	GGTGA	4 cut(s)	199, 317, 1636, 1663
Hpy166II	GTNNAC	8 cut(s)	207, 325, 778, 796, 1004, 1042, 1229, 1435
Hpy188III	TCNNGA	9 cut(s)	64, 169, 179, 472, 971, 1496, 1550, 1556, 1850
Hpy8I	GTNNAC	8 cut(s)	207, 325, 778, 796, 1004, 1042, 1229, 1435
HpyAV	CCTTC	6 cut(s)	121, 683, 916, 1403, 1456, 1770
HpyCH4III	ACNGT	7 cut(s)	124, 663, 846, 1008, 1453, 1510, 1701
HpyCH4IV	ACGT	5 cut(s)	135, 1086, 1477, 1689, 1797
HpyF10VI	GCNNNNNNNGC	3 cut(s)	431, 1373, 1593
HpyF3I	CTNAG	5 cut(s)	594, 683, 917, 1284, 1588
HpySE526I	ACGT	5 cut(s)	135, 1086, 1477, 1689, 1797
Hsp92II	CATG	5 cut(s)	453, 834, 1174, 1277, 1611
HspAI	GCGC	2 cut(s)	347, 1827
Kzo9I	GATC	8 cut(s)	76, 94, 615, 634, 787, 1300, 1552, 1638
LmnI	GCTCC	1 cut(s)	1837
Lsp1109I	GCAGC	3 cut(s)	920, 1351, 1407
LweI	GCATC	6 cut(s)	150, 421, 967, 1167, 1496, 1765
MaeI	CTAG	2 cut(s)	905, 1856
MaeII	ACGT	5 cut(s)	135, 1086, 1477, 1689, 1797
MaeIII	GTNAC	9 cut(s)	45, 409, 622, 709, 1008, 1217, 1261, 1419, 1693
MalI	GATC	8 cut(s)	78, 96, 617, 636, 789, 1302, 1554, 1640
MbiI	CCGCTC	1 cut(s)	1361
MboI	GATC	8 cut(s)	76, 94, 615, 634, 787, 1300, 1552, 1638
MboII	GAAGA	8 cut(s)	71, 161, 401, 539, 908, 1482, 1745, 1838
MflI	RGATCY	1 cut(s)	787
MhlI	GDGCHC	1 cut(s)	1797
MlsI	TGGCCA	1 cut(s)	1272
MluNI	TGGCCA	1 cut(s)	1272
MlyI	GAGTC	4 cut(s)	321, 1225, 1427, 1768
MmeI	TCCRAC	1 cut(s)	528
Mox20I	TGGCCA	1 cut(s)	1272
Mph1103I	ATGCAT	1 cut(s)	982
MroXI	GAANNNNTTC	2 cut(s)	1470, 1529
MscI	TGGCCA	1 cut(s)	1272
MseI	TTAA	8 cut(s)	30, 132, 342, 482, 815, 858, 1104, 1427
MslI	CAYNNNNRTG	3 cut(s)	1376, 1612, 1769
Msp20I	TGGCCA	1 cut(s)	1272
MspI	CCGG	2 cut(s)	117, 1750
MspR9I	CCNGG	3 cut(s)	1209, 1578, 1751
Mva1269I	GAATGC	2 cut(s)	1393, 1598
MvaI	CCWGG	2 cut(s)	1209, 1578
MwoI	GCNNNNNNNGC	3 cut(s)	431, 1373, 1593
NciI	CCSGG	1 cut(s)	1751
NdeI	CATATG	1 cut(s)	730
NdeII	GATC	8 cut(s)	76, 94, 615, 634, 787, 1300, 1552, 1638
NheI	GCTAGC	1 cut(s)	904
NlaIII	CATG	5 cut(s)	453, 834, 1174, 1277, 1611
NlaIV	GGNNCC	3 cut(s)	121, 1200, 1634
NmuCI	GTSAC	3 cut(s)	1008, 1217, 1419
NsbI	TGCGCA	1 cut(s)	348
NsiI	ATGCAT	1 cut(s)	982
NspI	RCATGY	1 cut(s)	834
NspV	TTCGAA	1 cut(s)	420
PceI	AGGCCT	2 cut(s)	1256, 1413
PciI	ACATGT	1 cut(s)	830
PcsI	WCGNNNNNNNCGW	4 cut(s)	141, 990, 1474, 1686
PctI	GAATGC	2 cut(s)	1393, 1598
PdmI	GAANNNNTTC	2 cut(s)	1470, 1529
PfeI	GAWTC	3 cut(s)	554, 1130, 1803
PflMI	CCANNNNNTGG	1 cut(s)	1208
PkrI	GCNGC	4 cut(s)	910, 1363, 1366, 1397
PleI	GAGTC	4 cut(s)	320, 1224, 1426, 1768
PpsI	GAGTC	4 cut(s)	320, 1224, 1426, 1768
PpuMI	RGGWCCY	1 cut(s)	1633
PscI	ACATGT	1 cut(s)	830
PsiI	TTATAA	1 cut(s)	1095
Psp1406I	AACGTT	1 cut(s)	135
Psp5II	RGGWCCY	1 cut(s)	1633
Psp6I	CCWGG	2 cut(s)	1207, 1576
PspEI	GGTNACC	1 cut(s)	45
PspFI	CCCAGC	1 cut(s)	1194
PspGI	CCWGG	2 cut(s)	1207, 1576
PspN4I	GGNNCC	3 cut(s)	121, 1200, 1634
PspPI	GGNCC	2 cut(s)	1617, 1633
PspPPI	RGGWCCY	1 cut(s)	1633
PsrI	GAACNNNNNNTAC	2 cut(s)	1458, 1490
PstI	CTGCAG	2 cut(s)	337, 1351
PstNI	CAGNNNCTG	2 cut(s)	667, 1208
PsuI	RGATCY	1 cut(s)	787
RsaI	GTAC	4 cut(s)	230, 1206, 1228, 1450
RsaNI	GTAC	4 cut(s)	229, 1205, 1227, 1449
RseI	CAYNNNNRTG	3 cut(s)	1376, 1612, 1769
SaqAI	TTAA	8 cut(s)	30, 132, 342, 482, 815, 858, 1104, 1427
SatI	GCNGC	4 cut(s)	909, 1362, 1365, 1396
Sau3AI	GATC	8 cut(s)	76, 94, 615, 634, 787, 1300, 1552, 1638
Sau96I	GGNCC	2 cut(s)	1617, 1633
SchI	GAGTC	4 cut(s)	321, 1225, 1427, 1768
ScrFI	CCNGG	3 cut(s)	1209, 1578, 1751
SduI	GDGCHC	1 cut(s)	1797
SfaNI	GCATC	6 cut(s)	150, 421, 967, 1167, 1496, 1765
SfcI	CTRYAG	2 cut(s)	333, 1347
SfuI	TTCGAA	1 cut(s)	420
SinI	GGWCC	2 cut(s)	1617, 1633
SmiMI	CAYNNNNRTG	3 cut(s)	1376, 1612, 1769
SmlI	CTYRAG	2 cut(s)	470, 1415
SmoI	CTYRAG	2 cut(s)	470, 1415
SpeI	ACTAGT	1 cut(s)	1855
SseBI	AGGCCT	2 cut(s)	1256, 1413
SsiI	CCGC	3 cut(s)	320, 1337, 1361
SspMI	CTAG	2 cut(s)	905, 1856
StuI	AGGCCT	2 cut(s)	1256, 1413
StyD4I	CCNGG	3 cut(s)	1207, 1576, 1749
StyI	CCWWGG	2 cut(s)	1257, 1620
TaaI	ACNGT	7 cut(s)	124, 663, 846, 1008, 1453, 1510, 1701
TaiI	ACGT	5 cut(s)	138, 1089, 1480, 1692, 1800
TaqI	TCGA	5 cut(s)	420, 864, 913, 1303, 1549
TatI	WGTACW	1 cut(s)	1226
TauI	GCSGC	1 cut(s)	1364
TfiI	GAWTC	3 cut(s)	554, 1130, 1803
Tru1I	TTAA	8 cut(s)	30, 132, 342, 482, 815, 858, 1104, 1427
Tru9I	TTAA	8 cut(s)	30, 132, 342, 482, 815, 858, 1104, 1427
TscAI	CASTG	4 cut(s)	577, 775, 1140, 1458
TseFI	GTSAC	3 cut(s)	1008, 1217, 1419
TseI	GCWGC	3 cut(s)	908, 1364, 1395
Tsp45I	GTSAC	3 cut(s)	1008, 1217, 1419
TspDTI	ATGAA	9 cut(s)	71, 182, 279, 474, 717, 852, 909, 1305, 1728
TspRI	CASTG	4 cut(s)	577, 775, 1140, 1458
Van91I	CCANNNNNTGG	1 cut(s)	1208
VpaK11BI	GGWCC	2 cut(s)	1617, 1633
XapI	RAATTY	6 cut(s)	52, 647, 745, 959, 1470, 1736
XceI	RCATGY	1 cut(s)	834
XmiI	GTMKAC	1 cut(s)	1041
XmnI	GAANNNNTTC	2 cut(s)	1470, 1529
XspI	CTAG	2 cut(s)	905, 1856
Zsp2I	ATGCAT	1 cut(s)	982

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.