Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb2

Orthogroup ID

OG0000648

Physical Location & Seq

Genomic Coordinates Forward (+)

24088480 .. 24093824

Gene Structure 5345 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_2g31440.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2661 bp

ATGTCGCAGTTCAAAGGCCAAGCTCGGCTTCCCAAGTTCGCCGTCCCCAAACGCTACGACGTTAAGCTCAAACCCGACCTCGTCGCCTGCAAATTCGGCGGATCCGTCGCCATCGACCTCGACATCGTCGCCGATACCCGCTTCATAGTCCTCAACGCCGCCGAGCTCTCCGTCAATGCCGCTTCCGCGTCTTTCACTCAACCTCACTCTTCCAAGGTTTTCAAGCCATCCAAAGTTGACGGGTTTGAAGAAGATGGCATTTTGGTTATGGAGTTTGAGGAGACGCTTCCGATTGGGCTCGGAGTTTTGGATATTGGATTTGAGGGGATTTTGAATGACAATATGAAGGGATTCTATAGAAGTACGTATGAGCATAACGGGGAGAAGAAAAACATGGCAGTTACACAGTTTGAGCCGGTTGATGCGCGGCGGTGCTTTCCGTGTTGGGATGAGCCTGCTTGCAAGGCTACATTCAAGATTACATTGGAAGATGTACCATCTGAACTAGTAGCTCTTTCCAACATGCCGGTTTCAGAAGAAAAAGTTAATGGACCTTTTAAGACAGTTTCATATCTGGAAACACCAATTATGTCTACGTATTTGGTGGCCATTGTTGTTGGTTTGTTCGATTATGTTGAAGATCATACTTGTGATGGGGTCAAAGTGAGGGTCTATTGTCAAGTTGGTAAGGAAAGCCAAGGGAAATTTGCTCTGGAGGTTGCTGTCAAGACACTTGAATTGTACACAGAATACTTTGGTGTGCATTACCCTTTGCCAAAATTGGATATGGTCGCAATCCCCGATTTTTCTGCTGGTGCCATGGAGAATTATGGTTTAGTTACATACCGTGAAACAGCTTTGCTCTTTGATGATCAGCATTCTTCAGCTTCCAGCAAGCAAAATGTAACAATAACCGTGGCACATGAATTGGCACACCAATGGTTTGGCAATCTTGTGACCATGGAATGGTGGACAGATTTGTGGCTAAATGAGGGATTTGCAACATGGGTGAGCTATTTAGCTACCGAGAGCTTGTTTCCTGAGTGGAAAATATGGACTCAGTTTCTTGATGAGTCTACTGAGGGTCTTAGGCTGGATGGTCTTGAAGAATCCCACCCCATCGAGGTGGAAATAAATCATGCGGCTGAGGTTGATGAAATATTTGATGCAATAAGTTATACGAAAGGTGCTTCTGTTATTAGGATGCTACAAAACTATCTTGGTGCCGAACCCTTTCAGAGGTCACTTGCTGCTTATATAAAAAAACATGCTTACTCAAATGCAAAGACAGAAGACTTATGGGCTGCCCTTGAGGAGGGATCTGGTGAACCTGTGAACAAGCTGATGAATTCGTGGACGCAGCAGAAAGGCTACCCAGTTGTTTCTGTCGAAGTCAAAGATCAAAAATTGAAGTTTGAACAGACACAATTCTTGTCGAGTGGTTCCCAAGGCAATGGAGAATGGATTGTACCAATAACATCATGCTGCGGCTCATATGATGTACGCAAGAGCTTCCTACTCAAAACTAAGTCTGAAGTTCTTGACATAAAGGAATTTCTTGGTTGTTCAATAGCAGAGACTGAAAGTGGAAGCTCATGCAATAAAAACAATACAGTCTGCAGTTGGATAAAAATCAATGTGGATCAAGCTGGCTTTTACAGGGTGAAATATGATGAGAAACTTGCAGCTACACTAAGAAATGCTATACAGAACAAATACTTGTCTGCAACAGACAAATTTGGCATTTTGGATGATTCATATTCCCTTTCTATGGCTTGTCAGCTGTCTTTTGCTTCTTTGCTCACCTTGTTGGCTGCTTATAAAGAGGAACTTGACTATACAGTCCTGTCAAATTTGATTTCTATTAGTCGTAAGCTTGCAAGAATTGCAGCTGATGCAGTACCCAAGCTACTTGATCTCATCAATCAGTTCTTTATTGGCCTTCTTCAGTACTCTGCAGAAAAGCTTGGTTGGCAGCCCAAACCCGGTGAGAGCCATTTAGATGCAATGTTGAGGGGTGAAATTTTGACCACCCTTGCTTTATTTGGACATGAGCCGACAATCAATGAAGCAAGCAGGCGTTTTCATGCCTACTTAGATGACAGAAATATGCCACTCCTTCCTCCTGACATTAGAAAGGCGGCATATGTGGCTGTAATGCAAAGAGTAACCCAATCAAATAGAGCAGGCTATGACTCTCTTCTTAGAGTTTACAGAGAGAGTGATCAAAGTGAGGAGAGAAACCGCGTTTTAGGATCATTAGCATCTTGTCCAGATCCAGACATTATACTGGAAGTTCTCAACTTTTTACTGACTTCAGAGGTCCGCAACCAGGATGCTATATTTGGACTTGCTGTTAGTAGCAACGGACGGGAAACAGCTTGGACTTGGCTGAAGGATAATTGGGTGCAAATCTCAAAGACCTGGGGTTCTGGATTTCTTATTACTCAATTTGTCAGTGCAATTGTTTCACCGCTTGCTTCATTTGAGAAGGTTAAGGAAGTAGAGGAGTTCTTCAAAGCCCATCCTAACCCTGCCGTAACTAGAACCTTGAAGCAGAGCATTGAGCGCGTGCAGATTAACACCAAGTGGGTTCAGAGTGTTCAGGGTGAGAAAGATCTTCCCAAGGTTTTGAAAGAGTTGCCTTCCAGCAAATACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001666 GO:0003674 GO:0003824 GO:0004177 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0006508 GO:0006518 GO:0006807 GO:0006810 GO:0006950 GO:0008144 GO:0008150 GO:0008152 GO:0008233 GO:0008235 GO:0008237 GO:0008238 GO:0008270 GO:0009056 GO:0009628 GO:0009914 GO:0009926 GO:0009987 GO:0010013 GO:0010817 GO:0016020 GO:0016787 GO:0019538 GO:0031090 GO:0031406 GO:0033218 GO:0033293 GO:0033554 GO:0034641 GO:0036094 GO:0036293 GO:0036294 GO:0042221 GO:0042277 GO:0043167 GO:0043168 GO:0043169 GO:0043170 GO:0043171 GO:0043177 GO:0043226 GO:0043227 GO:0043603 GO:0044237 GO:0044238 GO:0044248 GO:0044422 GO:0044424 GO:0044444 GO:0044464 GO:0046872 GO:0046914 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0060918 GO:0065007 GO:0065008 GO:0070006 GO:0070011 GO:0070482 GO:0070887 GO:0071453 GO:0071456 GO:0071704 GO:0071944 GO:0097159 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ERAP1_C Peptidase_M1

Protein Analysis

887

Amino Acids

99.42

Weight (kDa)

5.19

Isoelectric Point (pI)

33.34

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Peptidase_M1_N	PF17900	15 - 201	6.1e-46	Peptidase M1 N-terminal domain
Peptidase_M1	PF01433	236 - 452	1.5e-88	Peptidase family M1 domain
ERAP1_C	PF11838	542 - 859	5.2e-83	ERAP1-like C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000648)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G33090
fragaria_vesca	FvH4_2g31431 FvH4_2g31440 FvH4_6g34250 FvH4_6g34262 FvH4_6g34263
malus_domestica	MD08G1066400.v1.1 MD08G1066500.v1.1 MD08G1067400.v1.1 MD09G1070300.v1.1 MD09G1187200.v1.1 MD10G1090900.v1.1 MD15G1054400.v1.1 MD17G1171400.v1.1
prunus_persica	Prupe.1G407900_v2.0.a1 Prupe.1G408000_v2.0.a1 Prupe.1G408000_v2.0.a1 Prupe.1G408000_v2.0.a1 Prupe.1G457300_v2.0.a1 Prupe.3G044500_v2.0.a1 Prupe.3G044500_v2.0.a1
pyrus_communis	pycom08g05520 pycom08g05550 pycom08g05560 pycom08g05590 pycom09g10370 pycom09g10380 pycom10g07440 pycom10g07460 pycom15g05130 pycom15g05150 pycom17g16900
rosa_chinensis	RchiOBHm_Chr2g0144571 RchiOBHm_Chr2g0144611 RchiOBHm_Chr4g0390591 RchiOBHm_Chr6g0311371 RchiOBHm_Chr6g0311381
rosa_laevigata	RLG00000009010 RLG00000009289 RLG00000010411 RLG00000010412 RLG00000020090 RLG00000020092 RLG00000036974
rosa_multiflora	Rmu_co8212940.1_g000001 Rmu_sc0005789.1_g000001 Rmu_sc0008536.1_g000010 Rmu_sc0008536.1_g000011 Rmu_sc0009300.1_g000002
rosa_roxburghii	Rroxscaffold_1G00056400 Rroxscaffold_2G00084720 Rroxscaffold_2G00101200 Rroxscaffold_7G00157670 Rroxscaffold_7G00157680
rosa_rugosa	Rorug02G0387900 Rorug02G0388000 Rorug02G0388100 Rorug06G0388300 Rorug06G0388400
rosa_samantha	Rh2AG440000 Rh2AG440100 Rh2BG450000 Rh2BG450300 Rh2BG450500 Rh2CG427000 Rh2CG427200 Rh2DG459900 Rh2DG460300 Rh2DG460500 Rh6AG502600 Rh6AG502700 Rh6BG513300 Rh6CG519100 Rh6CG519200
rosa_wichuraiana	Rw2G036000 Rw6G043770 Rw6G043780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1821
AasI	GACNNNNNNGTC	1 cut(s)	1841
AccB1I	GGYRCC	2 cut(s)	815, 1223
AccB7I	CCANNNNNTGG	1 cut(s)	966
AccI	GTMKAC	2 cut(s)	593, 1076
AccII	CGCG	4 cut(s)	188, 427, 2247, 2571
AclWI	GGATC	6 cut(s)	96, 109, 1327, 1650, 2263, 2270
AcoI	YGGCCR	1 cut(s)	606
AcsI	RAATTY	7 cut(s)	92, 704, 1348, 1553, 1736, 1852, 2022
AcuI	CTGAAG	5 cut(s)	867, 1554, 1931, 2301, 2414
AdeI	CACNNNGTG	1 cut(s)	2589
AfaI	GTAC	7 cut(s)	364, 495, 743, 1470, 1503, 1902, 1952
AfiI	CCNNNNNNNGG	7 cut(s)	966, 1123, 1239, 1315, 1771, 1985, 2332
AhlI	ACTAGT	1 cut(s)	505
AjnI	CCWGG	2 cut(s)	2331, 2423
AjuI	GAANNNNNNNTTGG	2 cut(s)	12, 44
Alw21I	GWGCWC	1 cut(s)	168
Alw26I	GTCTC	2 cut(s)	275, 1571
AlwI	GGATC	6 cut(s)	96, 109, 1327, 1650, 2263, 2270
AlwNI	CAGNNNCTG	1 cut(s)	1580
AoxI	GGCC	3 cut(s)	16, 606, 1939
ApeKI	GCWGC	8 cut(s)	1250, 1304, 1360, 1485, 1685, 1814, 1889, 1975
ApoI	RAATTY	7 cut(s)	92, 704, 1348, 1553, 1736, 1852, 2022
ArsI	GACNNNNNNTTYG	2 cut(s)	654, 686
Asp700I	GAANNNNTTC	2 cut(s)	350, 1233
AspLEI	GCGC	2 cut(s)	427, 2571
AspS9I	GGNCC	2 cut(s)	551, 2323
AsuC2I	CCSGG	1 cut(s)	1986
AsuHPI	GGTGA	8 cut(s)	1021, 1337, 1675, 1795, 2000, 2030, 2463, 2621
AvaII	GGWCC	2 cut(s)	551, 2323
BalI	TGGCCA	1 cut(s)	608
BamHI	GGATCC	1 cut(s)	101
BanI	GGYRCC	2 cut(s)	815, 1223
BanII	GRGCYC	2 cut(s)	168, 300
BbsI	GAAGAC	1 cut(s)	1299
Bbv12I	GWGCWC	1 cut(s)	168
BbvCI	CCTCAGC	1 cut(s)	1146
BbvI	GCAGC	8 cut(s)	1237, 1291, 1372, 1472, 1697, 1801, 1901, 1987
BccI	CCATC	8 cut(s)	119, 235, 248, 505, 647, 1091, 1127, 2532
BceAI	ACGGC	2 cut(s)	26, 2522
BcgI	CGANNNNNNTGC	2 cut(s)	791, 825
BciT130I	CCWGG	2 cut(s)	2333, 2425
BclI	TGATCA	2 cut(s)	871, 2224
BcnI	CCSGG	1 cut(s)	1986
BcoDI	GTCTC	2 cut(s)	275, 1571
BcuI	ACTAGT	1 cut(s)	505
BfaI	CTAG	3 cut(s)	506, 2544, 2659
BfmI	CTRYAG	3 cut(s)	355, 1618, 1956
BglII	AGATCT	1 cut(s)	2617
BmcAI	AGTACT	1 cut(s)	1952
Bme1390I	CCNGG	3 cut(s)	1986, 2333, 2425
Bme18I	GGWCC	2 cut(s)	551, 2323
BmgT120I	GGNCC	2 cut(s)	551, 2323
BmiI	GGNNCC	4 cut(s)	103, 817, 1225, 1444
BmrFI	CCNGG	3 cut(s)	1986, 2333, 2425
BmrI	ACTGGG	1 cut(s)	1370
BmsI	GCATC	7 cut(s)	412, 1156, 1194, 1885, 1993, 2273, 2326
BmuI	ACTGGG	1 cut(s)	1370
BpiI	GAAGAC	1 cut(s)	1299
BpmI	CTGGAG	1 cut(s)	734
Bpu10I	CCTNAGC	1 cut(s)	1146
BpuEI	CTTGAG	1 cut(s)	1331
BpuMI	CCSGG	1 cut(s)	1986
BsaAI	YACGTR	2 cut(s)	366, 597
BsaBI	GATNNNNATC	1 cut(s)	1631
BsaJI	CCNNGG	8 cut(s)	213, 697, 819, 915, 960, 1447, 2424, 2625
Bsc4I	CCNNNNNNNGG	7 cut(s)	966, 1123, 1239, 1315, 1771, 1985, 2332
Bse118I	RCCGGY	2 cut(s)	415, 526
Bse1I	ACTGG	2 cut(s)	1376, 2295
Bse3DI	GCAATG	2 cut(s)	1459, 2013
Bse8I	GATNNNNATC	1 cut(s)	1631
BseBI	CCWGG	2 cut(s)	2333, 2425
BseDI	CCNNGG	8 cut(s)	213, 697, 819, 915, 960, 1447, 2424, 2625
BseGI	GGATG	7 cut(s)	227, 454, 1102, 1209, 1756, 2341, 2524
BseJI	GATNNNNATC	1 cut(s)	1631
BseLI	CCNNNNNNNGG	7 cut(s)	966, 1123, 1239, 1315, 1771, 1985, 2332
BseMI	GCAATG	2 cut(s)	1459, 2013
BseMII	CTCAG	4 cut(s)	1032, 1071, 1073, 1137
BseNI	ACTGG	2 cut(s)	1376, 2295
BseRI	GAGGAG	4 cut(s)	293, 1328, 2249, 2522
BseXI	GCAGC	8 cut(s)	1237, 1291, 1372, 1472, 1697, 1801, 1901, 1987
BsgI	GTGCAG	1 cut(s)	2594
Bsh1236I	CGCG	4 cut(s)	188, 427, 2247, 2571
BshFI	GGCC	3 cut(s)	18, 608, 1941
BshNI	GGYRCC	2 cut(s)	815, 1223
BsiHKAI	GWGCWC	1 cut(s)	168
BsiSI	CCGG	3 cut(s)	416, 527, 1986
BslFI	GGGAC	1 cut(s)	29
BslI	CCNNNNNNNGG	7 cut(s)	966, 1123, 1239, 1315, 1771, 1985, 2332
BsmAI	GTCTC	2 cut(s)	275, 1571
BsmBI	CGTCTC	1 cut(s)	275
BsmFI	GGGAC	1 cut(s)	29
BsmI	GAATGC	1 cut(s)	877
BsnI	GGCC	3 cut(s)	18, 608, 1941
Bsp1286I	GDGCHC	2 cut(s)	168, 300
Bsp1407I	TGTACA	1 cut(s)	741
Bsp19I	CCATGG	2 cut(s)	819, 960
BspANI	GGCC	3 cut(s)	18, 608, 1941
BspCNI	CTCAG	4 cut(s)	1033, 1072, 1072, 1138
BspFNI	CGCG	4 cut(s)	188, 427, 2247, 2571
BspLI	GGNNCC	4 cut(s)	103, 817, 1225, 1444
BspMAI	CTGCAG	2 cut(s)	1622, 1960
BspPI	GGATC	6 cut(s)	96, 109, 1327, 1650, 2263, 2270
BspT107I	GGYRCC	2 cut(s)	815, 1223
BsrDI	GCAATG	2 cut(s)	1459, 2013
BsrFI	RCCGGY	2 cut(s)	415, 526
BsrGI	TGTACA	1 cut(s)	741
BsrI	ACTGG	2 cut(s)	1376, 2295
BssAI	RCCGGY	2 cut(s)	415, 526
BssECI	CCNNGG	8 cut(s)	213, 697, 819, 915, 960, 1447, 2424, 2625
BssT1I	CCWWGG	6 cut(s)	213, 697, 819, 960, 1447, 2625
Bst2UI	CCWGG	2 cut(s)	2333, 2425
Bst4CI	ACNGT	6 cut(s)	408, 565, 848, 916, 1615, 1843
Bst6I	CTCTTC	2 cut(s)	214, 2205
BstAPI	GCANNNNNTGC	2 cut(s)	1886, 1895
BstAUI	TGTACA	1 cut(s)	741
BstBAI	YACGTR	2 cut(s)	366, 597
BstDEI	CTNAG	9 cut(s)	1041, 1059, 1080, 1088, 1146, 1527, 1694, 2095, 2204
BstDSI	CCRYGG	3 cut(s)	819, 915, 960
BstENI	CCTNNNNNAGG	2 cut(s)	1237, 1313
BstF5I	GGATG	7 cut(s)	227, 454, 1102, 1209, 1756, 2341, 2524
BstFNI	CGCG	4 cut(s)	188, 427, 2247, 2571
BstHHI	GCGC	2 cut(s)	427, 2571
BstMAI	GTCTC	2 cut(s)	275, 1571
BstMWI	GCNNNNNNNGC	8 cut(s)	96, 185, 464, 1886, 1895, 1972, 2150, 2568
BstNI	CCWGG	2 cut(s)	2333, 2425
BstNSI	RCATGY	2 cut(s)	526, 1271
BstSCI	CCNGG	3 cut(s)	1984, 2331, 2423
BstSFI	CTRYAG	3 cut(s)	355, 1618, 1956
BstSNI	TACGTA	2 cut(s)	366, 597
BstUI	CGCG	4 cut(s)	188, 427, 2247, 2571
BstV1I	GCAGC	8 cut(s)	1237, 1291, 1372, 1472, 1697, 1801, 1901, 1987
BstV2I	GAAGAC	1 cut(s)	1299
BstX2I	RGATCY	4 cut(s)	101, 1319, 2275, 2617
BstXI	CCANNNNNNTGG	3 cut(s)	944, 1126, 1454
BstYI	RGATCY	4 cut(s)	101, 1319, 2275, 2617
BsuRI	GGCC	3 cut(s)	18, 608, 1941
BtgI	CCRYGG	3 cut(s)	819, 915, 960
BtsCI	GGATG	7 cut(s)	227, 454, 1102, 1209, 1756, 2341, 2524
BtsIMutI	CAGTG	1 cut(s)	2464
CaiI	CAGNNNCTG	1 cut(s)	1580
CfoI	GCGC	2 cut(s)	427, 2571
Cfr10I	RCCGGY	2 cut(s)	415, 526
Cfr13I	GGNCC	2 cut(s)	551, 2323
CseI	GACGC	3 cut(s)	177, 292, 1366
Csp6I	GTAC	7 cut(s)	363, 494, 742, 1469, 1502, 1901, 1951
CspCI	CAANNNNNGTGG	2 cut(s)	897, 932
CviQI	GTAC	7 cut(s)	363, 494, 742, 1469, 1502, 1901, 1951
DdeI	CTNAG	9 cut(s)	1041, 1059, 1080, 1088, 1146, 1527, 1694, 2095, 2204
DraIII	CACNNNGTG	1 cut(s)	2589
DrdI	GACNNNNNNGTC	1 cut(s)	1841
DseDI	GACNNNNNNGTC	1 cut(s)	1841
EaeI	YGGCCR	1 cut(s)	606
Eam1104I	CTCTTC	2 cut(s)	214, 2205
EarI	CTCTTC	2 cut(s)	214, 2205
EciI	GGCGGA	1 cut(s)	114
Ecl136II	GAGCTC	1 cut(s)	166
Eco105I	TACGTA	2 cut(s)	366, 597
Eco130I	CCWWGG	6 cut(s)	213, 697, 819, 960, 1447, 2625
Eco24I	GRGCYC	2 cut(s)	168, 300
Eco47I	GGWCC	2 cut(s)	551, 2323
Eco53kI	GAGCTC	1 cut(s)	166
Eco57I	CTGAAG	5 cut(s)	867, 1554, 1931, 2301, 2414
EcoICRI	GAGCTC	1 cut(s)	166
EcoNI	CCTNNNNNAGG	2 cut(s)	1237, 1313
EcoRI	GAATTC	1 cut(s)	1348
EcoRII	CCWGG	2 cut(s)	2331, 2423
EcoT14I	CCWWGG	6 cut(s)	213, 697, 819, 960, 1447, 2625
EcoT38I	GRGCYC	2 cut(s)	168, 300
ErhI	CCWWGG	6 cut(s)	213, 697, 819, 960, 1447, 2625
Esp3I	CGTCTC	1 cut(s)	275
FalI	AAGNNNNNCTT	4 cut(s)	12, 44, 1815, 1847
FaqI	GGGAC	1 cut(s)	29
FauI	CCCGC	1 cut(s)	146
FauNDI	CATATG	2 cut(s)	1495, 2146
FbaI	TGATCA	2 cut(s)	871, 2224
FblI	GTMKAC	2 cut(s)	593, 1076
FokI	GGATG	7 cut(s)	214, 461, 1109, 1216, 1763, 2348, 2511
FriOI	GRGCYC	2 cut(s)	168, 300
FspBI	CTAG	3 cut(s)	506, 2544, 2659
GlaI	GCGC	2 cut(s)	426, 2570
GsuI	CTGGAG	1 cut(s)	734
HaeIII	GGCC	3 cut(s)	18, 608, 1941
HapII	CCGG	3 cut(s)	416, 527, 1986
HgaI	GACGC	3 cut(s)	177, 292, 1366
HhaI	GCGC	2 cut(s)	427, 2571
Hin6I	GCGC	2 cut(s)	425, 2569
HinP1I	GCGC	2 cut(s)	425, 2569
HincII	GTYRAC	1 cut(s)	238
HindII	GTYRAC	1 cut(s)	238
HindIII	AAGCTT	2 cut(s)	1874, 1964
HinfI	GANTC	6 cut(s)	351, 1057, 1073, 1109, 1754, 2195
HpaII	CCGG	3 cut(s)	416, 527, 1986
HphI	GGTGA	8 cut(s)	1021, 1337, 1675, 1795, 2000, 2030, 2463, 2621
Hpy166II	GTNNAC	9 cut(s)	238, 594, 744, 972, 1077, 1328, 1336, 1356, 2212
Hpy188I	TCNGA	8 cut(s)	291, 302, 502, 535, 1239, 1534, 2320, 2598
Hpy8I	GTNNAC	9 cut(s)	238, 594, 744, 972, 1077, 1328, 1336, 1356, 2212
Hpy99I	CGWCG	4 cut(s)	62, 86, 110, 131
HpyAV	CCTTC	6 cut(s)	340, 1952, 2129, 2389, 2485, 2655
HpyCH4III	ACNGT	6 cut(s)	408, 565, 848, 916, 1615, 1843
HpyCH4IV	ACGT	3 cut(s)	60, 365, 596
HpyF10VI	GCNNNNNNNGC	8 cut(s)	96, 185, 464, 1886, 1895, 1972, 2150, 2568
HpyF3I	CTNAG	9 cut(s)	1041, 1059, 1080, 1088, 1146, 1527, 1694, 2095, 2204
HpySE526I	ACGT	3 cut(s)	60, 365, 596
HspAI	GCGC	2 cut(s)	425, 2569
Ksp22I	TGATCA	2 cut(s)	871, 2224
Lsp1109I	GCAGC	8 cut(s)	1237, 1291, 1372, 1472, 1697, 1801, 1901, 1987
LweI	GCATC	7 cut(s)	412, 1156, 1194, 1885, 1993, 2273, 2326
MaeI	CTAG	3 cut(s)	506, 2544, 2659
MaeII	ACGT	3 cut(s)	60, 365, 596
MaeIII	GTNAC	7 cut(s)	400, 838, 904, 955, 1242, 2167, 2539
MfeI	CAATTG	1 cut(s)	2463
MflI	RGATCY	4 cut(s)	101, 1319, 2275, 2617
MhlI	GDGCHC	2 cut(s)	168, 300
MlsI	TGGCCA	1 cut(s)	608
MluNI	TGGCCA	1 cut(s)	608
MlyI	GAGTC	3 cut(s)	1051, 1082, 2189
MmeI	TCCRAC	2 cut(s)	543, 1604
Mox20I	TGGCCA	1 cut(s)	608
MroXI	GAANNNNTTC	2 cut(s)	350, 1233
MscI	TGGCCA	1 cut(s)	608
MseI	TTAA	5 cut(s)	63, 546, 558, 2496, 2580
MslI	CAYNNNNRTG	4 cut(s)	648, 937, 1124, 2001
Msp20I	TGGCCA	1 cut(s)	608
MspA1I	CMGCKG	2 cut(s)	1783, 1892
MspI	CCGG	3 cut(s)	416, 527, 1986
MspR9I	CCNGG	3 cut(s)	1986, 2333, 2425
MunI	CAATTG	1 cut(s)	2463
Mva1269I	GAATGC	1 cut(s)	877
MvaI	CCWGG	2 cut(s)	2333, 2425
MvnI	CGCG	4 cut(s)	188, 427, 2247, 2571
MwoI	GCNNNNNNNGC	8 cut(s)	96, 185, 464, 1886, 1895, 1972, 2150, 2568
NciI	CCSGG	1 cut(s)	1986
NcoI	CCATGG	2 cut(s)	819, 960
NdeI	CATATG	2 cut(s)	1495, 2146
NlaIV	GGNNCC	4 cut(s)	103, 817, 1225, 1444
NmeAIII	GCCGAG	2 cut(s)	4, 187
NmuCI	GTSAC	2 cut(s)	955, 1242
NspI	RCATGY	2 cut(s)	526, 1271
PcsI	WCGNNNNNNNCGW	2 cut(s)	102, 798
PctI	GAATGC	1 cut(s)	877
PdmI	GAANNNNTTC	2 cut(s)	350, 1233
PfeI	GAWTC	3 cut(s)	351, 1109, 1754
PflFI	GACNNNGTC	2 cut(s)	80, 125
PflMI	CCANNNNNTGG	1 cut(s)	966
PleI	GAGTC	3 cut(s)	1051, 1081, 2189
PpsI	GAGTC	3 cut(s)	1051, 1081, 2189
Ppu21I	YACGTR	2 cut(s)	366, 597
PsiI	TTATAA	1 cut(s)	1821
Psp124BI	GAGCTC	1 cut(s)	168
Psp6I	CCWGG	2 cut(s)	2331, 2423
PspGI	CCWGG	2 cut(s)	2331, 2423
PspN4I	GGNNCC	4 cut(s)	103, 817, 1225, 1444
PspPI	GGNCC	2 cut(s)	551, 2323
PstI	CTGCAG	2 cut(s)	1622, 1960
PstNI	CAGNNNCTG	1 cut(s)	1580
PsuI	RGATCY	4 cut(s)	101, 1319, 2275, 2617
PsyI	GACNNNGTC	2 cut(s)	80, 125
PvuII	CAGCTG	2 cut(s)	1783, 1892
RsaI	GTAC	7 cut(s)	364, 495, 743, 1470, 1503, 1902, 1952
RsaNI	GTAC	7 cut(s)	363, 494, 742, 1469, 1502, 1901, 1951
RseI	CAYNNNNRTG	4 cut(s)	648, 937, 1124, 2001
SacI	GAGCTC	1 cut(s)	168
SaqAI	TTAA	5 cut(s)	63, 546, 558, 2496, 2580
Sau96I	GGNCC	2 cut(s)	551, 2323
ScaI	AGTACT	1 cut(s)	1952
SchI	GAGTC	3 cut(s)	1051, 1082, 2189
ScrFI	CCNGG	3 cut(s)	1986, 2333, 2425
SduI	GDGCHC	2 cut(s)	168, 300
SfaNI	GCATC	7 cut(s)	412, 1156, 1194, 1885, 1993, 2273, 2326
SfcI	CTRYAG	3 cut(s)	355, 1618, 1956
SinI	GGWCC	2 cut(s)	551, 2323
SmiMI	CAYNNNNRTG	4 cut(s)	648, 937, 1124, 2001
SmlI	CTYRAG	1 cut(s)	1310
SmoI	CTYRAG	1 cut(s)	1310
SnaBI	TACGTA	2 cut(s)	366, 597
SpeI	ACTAGT	1 cut(s)	505
SspI	AATATT	1 cut(s)	1161
SspMI	CTAG	3 cut(s)	506, 2544, 2659
SstI	GAGCTC	1 cut(s)	168
StyD4I	CCNGG	3 cut(s)	1984, 2331, 2423
StyI	CCWWGG	6 cut(s)	213, 697, 819, 960, 1447, 2625
TaaI	ACNGT	6 cut(s)	408, 565, 848, 916, 1615, 1843
TaiI	ACGT	3 cut(s)	63, 368, 599
TaqI	TCGA	6 cut(s)	114, 120, 627, 1122, 1389, 1436
TatI	WGTACW	2 cut(s)	741, 1950
TauI	GCSGC	6 cut(s)	161, 182, 430, 1145, 1491, 2144
TfiI	GAWTC	3 cut(s)	351, 1109, 1754
Tru1I	TTAA	5 cut(s)	63, 546, 558, 2496, 2580
Tru9I	TTAA	5 cut(s)	63, 546, 558, 2496, 2580
TscAI	CASTG	1 cut(s)	2464
TseFI	GTSAC	2 cut(s)	955, 1242
TseI	GCWGC	8 cut(s)	1250, 1304, 1360, 1485, 1685, 1814, 1889, 1975
Tsp45I	GTSAC	2 cut(s)	955, 1242
TspGWI	ACGGA	4 cut(s)	94, 160, 429, 2382
TspRI	CASTG	1 cut(s)	2464
Tth111I	GACNNNGTC	2 cut(s)	80, 125
Van91I	CCANNNNNTGG	1 cut(s)	966
VpaK11BI	GGWCC	2 cut(s)	551, 2323
XagI	CCTNNNNNAGG	2 cut(s)	1237, 1313
XapI	RAATTY	7 cut(s)	92, 704, 1348, 1553, 1736, 1852, 2022
XceI	RCATGY	2 cut(s)	526, 1271
XmiI	GTMKAC	2 cut(s)	593, 1076
XmnI	GAANNNNTTC	2 cut(s)	350, 1233
XspI	CTAG	3 cut(s)	506, 2544, 2659
ZrmI	AGTACT	1 cut(s)	1952

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.