Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0000648

Physical Location & Seq

Genomic Coordinates Reverse (-)

53302041 .. 53303876

Gene Structure 1836 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0388300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1116 bp

ATGCTGATCTCGCCCACCCCACTCTCTCTCATCTGTGCCCTCATACTCTGCATGCCCCTCGCCGTCGTCTTCACCGTCACCAGCCCCACCAACATTCCTCTCCAAATCCCCAAAGCCCACCGGAAACTAAACCTGGCGCCTCTTCCTCCACCGCCTCCGCCTCCGCCTGCTCCGCTGCCTTTAGATGATCTATCTCTTTTACGAATCGCCGCCCGGGTTAACTCGAGGCCGCCCAGGTACAAGAAGCCGAAAATCGCCTTCATGTTCCTCACCACCACCCCGCTGCCGTTCGCTCCTCTGTGGCAGCGATTCTTCAGTAAGGCCCCCAAGTCGCTGTACAGAATCTACGTCCACGCCGACCCCAGATTCCCTTACGAGCCTCCGTTCTCCGGCGTCTTCGCCGGCCGGGTTATTCATTCGAAACCCGCCCAGCGGTTCACCCCCACTCTCATTTCCGCCACGCGCCGCCTACTCGCCCACGCGCTTCTCGACGATCCCCGGAACTCGATGTTCGCGCTGCTCACTCCCTCGTGCATCCCCCTCCACTCGTTCAACTTCACGTACCGGACGCTGGCCGCGTCGAAGAAGAGCTTCATCGAAATCCTCGGCAACGAGATCGGGGCGTACGACAGGTGGGCGGCGCGTGGGCCGGACGCGATGCTCCCGCAGGTGAGCCTGGAGGAGTTCCGGATCGGGTCGCAGTTTTGGGTCCTGAAGCGGAAGCACGCTCGGCTTGTGGTGAGTGACCAGCGGCTTTGGTCCAAGTTCAAGCTCCCGTGCGAGCGGTGGGACACGTGTTACCCTGAGGAAAATTACTTCCCTACCCTCCTCAACATGCGCGACCCAGACGGGTGCGTGCCTGCCACGCTCACGCACGTGGACTGGACCGGGAGGGTCGACGGCCACCCGGTGACGTACAACGCCTCCGACGTGGGGCCAGACCTGATCTGGTCGCTGAGGGAGGACAGGCCCAGGTACGGCGACGAGGTGAACGTCAACGCCACCGATTGGTCCGGCAGCGAACGCCACGATCCTTTTCTTTTCGCGAGGAAGTTTCCGCCGGACGCAATCGAGCCGTTGATGAGTATGGCGAGTGACGTCATTTTCAGAGACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001666 GO:0003674 GO:0003824 GO:0004177 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0006508 GO:0006518 GO:0006807 GO:0006810 GO:0006950 GO:0008144 GO:0008150 GO:0008152 GO:0008233 GO:0008235 GO:0008237 GO:0008238 GO:0008270 GO:0009056 GO:0009628 GO:0009914 GO:0009926 GO:0009987 GO:0010013 GO:0010817 GO:0016020 GO:0016787 GO:0019538 GO:0031090 GO:0031406 GO:0033218 GO:0033293 GO:0033554 GO:0034641 GO:0036094 GO:0036293 GO:0036294 GO:0042221 GO:0042277 GO:0043167 GO:0043168 GO:0043169 GO:0043170 GO:0043171 GO:0043177 GO:0043226 GO:0043227 GO:0043603 GO:0044237 GO:0044238 GO:0044248 GO:0044422 GO:0044424 GO:0044444 GO:0044464 GO:0046872 GO:0046914 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0060918 GO:0065007 GO:0065008 GO:0070006 GO:0070011 GO:0070482 GO:0070887 GO:0071453 GO:0071456 GO:0071704 GO:0071944 GO:0097159 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ERAP1_C Peptidase_M1

Protein Analysis

371

Amino Acids

42.09

Weight (kDa)

9.37

Isoelectric Point (pI)

44.09

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Branch	PF02485	85 - 318	2.3e-65	Core-2/I-Branching enzyme

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000648)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G33090
fragaria_vesca	FvH4_2g31431 FvH4_2g31440 FvH4_6g34250 FvH4_6g34262 FvH4_6g34263
malus_domestica	MD08G1066400.v1.1 MD08G1066500.v1.1 MD08G1067400.v1.1 MD09G1070300.v1.1 MD09G1187200.v1.1 MD10G1090900.v1.1 MD15G1054400.v1.1 MD17G1171400.v1.1
prunus_persica	Prupe.1G407900_v2.0.a1 Prupe.1G408000_v2.0.a1 Prupe.1G408000_v2.0.a1 Prupe.1G408000_v2.0.a1 Prupe.1G457300_v2.0.a1 Prupe.3G044500_v2.0.a1 Prupe.3G044500_v2.0.a1
pyrus_communis	pycom08g05520 pycom08g05550 pycom08g05560 pycom08g05590 pycom09g10370 pycom09g10380 pycom10g07440 pycom10g07460 pycom15g05130 pycom15g05150 pycom17g16900
rosa_chinensis	RchiOBHm_Chr2g0144571 RchiOBHm_Chr2g0144611 RchiOBHm_Chr4g0390591 RchiOBHm_Chr6g0311371 RchiOBHm_Chr6g0311381
rosa_laevigata	RLG00000009010 RLG00000009289 RLG00000010411 RLG00000010412 RLG00000020090 RLG00000020092 RLG00000036974
rosa_multiflora	Rmu_co8212940.1_g000001 Rmu_sc0005789.1_g000001 Rmu_sc0008536.1_g000010 Rmu_sc0008536.1_g000011 Rmu_sc0009300.1_g000002
rosa_roxburghii	Rroxscaffold_1G00056400 Rroxscaffold_2G00084720 Rroxscaffold_2G00101200 Rroxscaffold_7G00157670 Rroxscaffold_7G00157680
rosa_rugosa	Rorug02G0387900 Rorug02G0388000 Rorug02G0388100 Rorug06G0388300 Rorug06G0388400
rosa_samantha	Rh2AG440000 Rh2AG440100 Rh2BG450000 Rh2BG450300 Rh2BG450500 Rh2CG427000 Rh2CG427200 Rh2DG459900 Rh2DG460300 Rh2DG460500 Rh6AG502600 Rh6AG502700 Rh6BG513300 Rh6CG519100 Rh6CG519200
rosa_wichuraiana	Rw2G036000 Rw6G043770 Rw6G043780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	658
AatII	GACGTC	1 cut(s)	1101
Acc36I	ACCTGC	1 cut(s)	658
AccB1I	GGYRCC	1 cut(s)	136
AccB7I	CCANNNNNTGG	1 cut(s)	1008
AccBSI	CCGCTC	1 cut(s)	784
AccI	GTMKAC	1 cut(s)	897
AccII	CGCG	8 cut(s)	463, 482, 515, 578, 643, 656, 840, 1046
AccIII	TCCGGA	1 cut(s)	687
AclWI	GGATC	3 cut(s)	488, 698, 1025
AcoI	YGGCCR	3 cut(s)	403, 573, 901
AcuI	CTGAAG	2 cut(s)	298, 734
AcvI	CACGTG	2 cut(s)	795, 877
AcyI	GRCGYC	3 cut(s)	137, 393, 1098
AdeI	CACNNNGTG	1 cut(s)	910
AfaI	GTAC	6 cut(s)	239, 338, 563, 626, 917, 977
AfiI	CCNNNNNNNGG	6 cut(s)	389, 432, 571, 933, 977, 1008
AflIII	ACRYGT	2 cut(s)	792, 794
AgsI	TTSAA	2 cut(s)	553, 769
AjiI	CACGTC	1 cut(s)	931
AjnI	CCWGG	4 cut(s)	132, 233, 675, 971
AleI	CACNNNNGTG	1 cut(s)	875
AluBI	AGCT	2 cut(s)	591, 772
AluI	AGCT	2 cut(s)	591, 772
Alw26I	GTCTC	1 cut(s)	1104
AlwI	GGATC	3 cut(s)	488, 698, 1025
Ama87I	CYCGRG	2 cut(s)	213, 223
Aor13HI	TCCGGA	1 cut(s)	687
AoxI	GGCC	8 cut(s)	227, 321, 403, 573, 647, 901, 935, 968
ApeKI	GCWGC	5 cut(s)	175, 283, 304, 517, 1017
Asp700I	GAANNNNTTC	1 cut(s)	590
AspLEI	GCGC	6 cut(s)	139, 465, 484, 517, 643, 840
AspS9I	GGNCC	8 cut(s)	322, 647, 709, 759, 885, 935, 969, 1011
AsuC2I	CCSGG	6 cut(s)	214, 215, 407, 499, 889, 908
AsuHPI	GGTGA	8 cut(s)	64, 70, 262, 430, 682, 751, 922, 1000
AsuII	TTCGAA	1 cut(s)	419
AvaI	CYCGRG	2 cut(s)	213, 223
AvaII	GGWCC	4 cut(s)	709, 759, 885, 1011
AxyI	CCTNAGG	1 cut(s)	804
BaeGI	GKGCMC	1 cut(s)	40
BanI	GGYRCC	1 cut(s)	136
BauI	CACGAG	1 cut(s)	529
BbrPI	CACGTG	2 cut(s)	795, 877
BbsI	GAAGAC	2 cut(s)	61, 388
BbvCI	CCTCAGC	1 cut(s)	956
BbvI	GCAGC	5 cut(s)	162, 270, 316, 504, 1029
BceAI	ACGGC	5 cut(s)	47, 271, 916, 994, 1060
BcgI	CGANNNNNNTGC	4 cut(s)	40, 74, 598, 632
BciT130I	CCWGG	4 cut(s)	134, 235, 677, 973
BcnI	CCSGG	6 cut(s)	214, 215, 407, 499, 889, 908
BcoDI	GTCTC	1 cut(s)	1104
BfoI	RGCGCY	1 cut(s)	140
BfuAI	ACCTGC	1 cut(s)	658
Bme18I	GGWCC	4 cut(s)	709, 759, 885, 1011
BmeT110I	CYCGRG	2 cut(s)	213, 223
BmgBI	CACGTC	1 cut(s)	931
BmgT120I	GGNCC	8 cut(s)	322, 647, 709, 759, 885, 935, 969, 1011
BmiI	GGNNCC	4 cut(s)	138, 324, 710, 936
BmsI	GCATC	2 cut(s)	543, 648
BpiI	GAAGAC	2 cut(s)	61, 388
BpmI	CTGGAG	1 cut(s)	698
Bpu10I	CCTNAGC	1 cut(s)	956
Bpu14I	TTCGAA	1 cut(s)	419
BpuMI	CCSGG	6 cut(s)	214, 215, 407, 499, 889, 908
BsaAI	YACGTR	3 cut(s)	561, 795, 877
BsaHI	GRCGYC	3 cut(s)	137, 393, 1098
BsaJI	CCNNGG	5 cut(s)	213, 233, 497, 604, 971
BsaWI	WCCGGW	3 cut(s)	120, 564, 687
BsaXI	ACNNNNNCTCC	2 cut(s)	908, 938
Bsc4I	CCNNNNNNNGG	6 cut(s)	389, 432, 571, 933, 977, 1008
Bse118I	RCCGGY	1 cut(s)	401
Bse1I	ACTGG	1 cut(s)	887
Bse21I	CCTNAGG	1 cut(s)	804
BseAI	TCCGGA	1 cut(s)	687
BseBI	CCWGG	4 cut(s)	134, 235, 677, 973
BseDI	CCNNGG	5 cut(s)	213, 233, 497, 604, 971
BseGI	GGATG	1 cut(s)	534
BseLI	CCNNNNNNNGG	6 cut(s)	389, 432, 571, 933, 977, 1008
BseMII	CTCAG	2 cut(s)	795, 947
BseNI	ACTGG	1 cut(s)	887
BseRI	GAGGAG	3 cut(s)	285, 695, 818
BseSI	GKGCMC	1 cut(s)	40
BseX3I	CGGCCG	1 cut(s)	403
BseXI	GCAGC	5 cut(s)	162, 270, 316, 504, 1029
BseYI	CCCAGC	1 cut(s)	429
Bsh1236I	CGCG	8 cut(s)	463, 482, 515, 578, 643, 656, 840, 1046
Bsh1285I	CGRYCG	1 cut(s)	406
BshFI	GGCC	8 cut(s)	229, 323, 405, 575, 649, 903, 937, 970
BshNI	GGYRCC	1 cut(s)	136
BsiEI	CGRYCG	1 cut(s)	406
BsiHKCI	CYCGRG	2 cut(s)	213, 223
BsiWI	CGTACG	1 cut(s)	624
BslFI	GGGAC	1 cut(s)	803
BslI	CCNNNNNNNGG	6 cut(s)	389, 432, 571, 933, 977, 1008
BsmAI	GTCTC	1 cut(s)	1104
BsmFI	GGGAC	1 cut(s)	803
BsnI	GGCC	8 cut(s)	229, 323, 405, 575, 649, 903, 937, 970
BsoBI	CYCGRG	2 cut(s)	213, 223
Bsp119I	TTCGAA	1 cut(s)	419
Bsp1286I	GDGCHC	1 cut(s)	40
Bsp13I	TCCGGA	1 cut(s)	687
Bsp1407I	TGTACA	1 cut(s)	336
Bsp143I	GATC	7 cut(s)	6, 187, 493, 615, 690, 945, 1030
Bsp68I	TCGCGA	1 cut(s)	1046
BspANI	GGCC	8 cut(s)	229, 323, 405, 575, 649, 903, 937, 970
BspCNI	CTCAG	2 cut(s)	796, 948
BspEI	TCCGGA	1 cut(s)	687
BspFNI	CGCG	8 cut(s)	463, 482, 515, 578, 643, 656, 840, 1046
BspLI	GGNNCC	4 cut(s)	138, 324, 710, 936
BspMI	ACCTGC	1 cut(s)	658
BspPI	GGATC	3 cut(s)	488, 698, 1025
BspQI	GCTCTTC	1 cut(s)	581
BspT104I	TTCGAA	1 cut(s)	419
BspT107I	GGYRCC	1 cut(s)	136
BsrBI	CCGCTC	1 cut(s)	784
BsrFI	RCCGGY	1 cut(s)	401
BsrGI	TGTACA	1 cut(s)	336
BsrI	ACTGG	1 cut(s)	887
BssAI	RCCGGY	1 cut(s)	401
BssECI	CCNNGG	5 cut(s)	213, 233, 497, 604, 971
BssMI	GATC	7 cut(s)	6, 187, 493, 615, 690, 945, 1030
BssNI	GRCGYC	3 cut(s)	137, 393, 1098
BssSI	CACGAG	1 cut(s)	529
Bst2BI	CACGAG	1 cut(s)	529
Bst2UI	CCWGG	4 cut(s)	134, 235, 677, 973
Bst4CI	ACNGT	1 cut(s)	76
Bst6I	CTCTTC	2 cut(s)	147, 581
BstACI	GRCGYC	3 cut(s)	137, 393, 1098
BstAUI	TGTACA	1 cut(s)	336
BstBAI	YACGTR	3 cut(s)	561, 795, 877
BstBI	TTCGAA	1 cut(s)	419
BstC8I	GCNNGC	8 cut(s)	53, 168, 403, 573, 726, 782, 857, 861
BstDEI	CTNAG	2 cut(s)	804, 956
BstF5I	GGATG	1 cut(s)	534
BstFNI	CGCG	8 cut(s)	463, 482, 515, 578, 643, 656, 840, 1046
BstH2I	RGCGCY	1 cut(s)	140
BstHHI	GCGC	6 cut(s)	139, 465, 484, 517, 643, 840
BstKTI	GATC	7 cut(s)	9, 190, 496, 618, 693, 948, 1033
BstMAI	GTCTC	1 cut(s)	1104
BstMBI	GATC	7 cut(s)	6, 187, 493, 615, 690, 945, 1030
BstMCI	CGRYCG	1 cut(s)	406
BstMWI	GCNNNNNNNGC	5 cut(s)	10, 172, 730, 865, 1023
BstNI	CCWGG	4 cut(s)	134, 235, 677, 973
BstNSI	RCATGY	2 cut(s)	55, 838
BstSLI	GKGCMC	1 cut(s)	40
BstUI	CGCG	8 cut(s)	463, 482, 515, 578, 643, 656, 840, 1046
BstV1I	GCAGC	5 cut(s)	162, 270, 316, 504, 1029
BstV2I	GAAGAC	2 cut(s)	61, 388
BstZI	CGGCCG	1 cut(s)	403
Bsu36I	CCTNAGG	1 cut(s)	804
BsuRI	GGCC	8 cut(s)	229, 323, 405, 575, 649, 903, 937, 970
BtgZI	GCGATG	1 cut(s)	671
BtrI	CACGTC	1 cut(s)	931
BtsCI	GGATG	1 cut(s)	534
BtuMI	TCGCGA	1 cut(s)	1046
BveI	ACCTGC	1 cut(s)	658
Cac8I	GCNNGC	8 cut(s)	53, 168, 403, 573, 726, 782, 857, 861
CfoI	GCGC	6 cut(s)	139, 465, 484, 517, 643, 840
Cfr10I	RCCGGY	1 cut(s)	401
Cfr13I	GGNCC	8 cut(s)	322, 647, 709, 759, 885, 935, 969, 1011
Cfr9I	CCCGGG	1 cut(s)	213
CseI	GACGC	5 cut(s)	382, 567, 577, 662, 1073
Csp6I	GTAC	6 cut(s)	238, 337, 562, 625, 916, 976
CviAII	CATG	3 cut(s)	52, 262, 835
CviQI	GTAC	6 cut(s)	238, 337, 562, 625, 916, 976
DdeI	CTNAG	2 cut(s)	804, 956
DinI	GGCGCC	1 cut(s)	138
DpnI	GATC	7 cut(s)	8, 189, 495, 617, 692, 947, 1032
DpnII	GATC	7 cut(s)	6, 187, 493, 615, 690, 945, 1030
DraIII	CACNNNGTG	1 cut(s)	910
EaeI	YGGCCR	3 cut(s)	403, 573, 901
EagI	CGGCCG	1 cut(s)	403
Eam1104I	CTCTTC	2 cut(s)	147, 581
EarI	CTCTTC	2 cut(s)	147, 581
EciI	GGCGGA	4 cut(s)	147, 153, 445, 1047
EclXI	CGGCCG	1 cut(s)	403
Eco47I	GGWCC	4 cut(s)	709, 759, 885, 1011
Eco52I	CGGCCG	1 cut(s)	403
Eco57I	CTGAAG	2 cut(s)	298, 734
Eco72I	CACGTG	2 cut(s)	795, 877
Eco81I	CCTNAGG	1 cut(s)	804
Eco88I	CYCGRG	2 cut(s)	213, 223
EcoO109I	RGGNCCY	2 cut(s)	322, 709
EcoRII	CCWGG	4 cut(s)	132, 233, 675, 971
EgeI	GGCGCC	1 cut(s)	138
EheI	GGCGCC	1 cut(s)	138
FaeI	CATG	3 cut(s)	55, 265, 838
FaiI	YATR	5 cut(s)	44, 53, 263, 836, 1088
FalI	AAGNNNNNCTT	2 cut(s)	575, 607
FaqI	GGGAC	1 cut(s)	803
FatI	CATG	3 cut(s)	51, 261, 834
FauI	CCCGC	3 cut(s)	288, 433, 672
FblI	GTMKAC	1 cut(s)	897
FokI	GGATG	1 cut(s)	521
GlaI	GCGC	6 cut(s)	138, 464, 483, 516, 642, 839
GsaI	CCCAGC	1 cut(s)	433
GsuI	CTGGAG	1 cut(s)	698
HaeII	RGCGCY	1 cut(s)	140
HaeIII	GGCC	8 cut(s)	229, 323, 405, 575, 649, 903, 937, 970
HgaI	GACGC	5 cut(s)	382, 567, 577, 662, 1073
HhaI	GCGC	6 cut(s)	139, 465, 484, 517, 643, 840
Hin1I	GRCGYC	3 cut(s)	137, 393, 1098
Hin1II	CATG	3 cut(s)	55, 265, 838
Hin6I	GCGC	6 cut(s)	137, 463, 482, 515, 641, 838
HinP1I	GCGC	6 cut(s)	137, 463, 482, 515, 641, 838
HincII	GTYRAC	3 cut(s)	220, 898, 997
HindII	GTYRAC	3 cut(s)	220, 898, 997
HinfI	GANTC	4 cut(s)	204, 309, 342, 366
HpaI	GTTAAC	1 cut(s)	220
HphI	GGTGA	8 cut(s)	64, 70, 262, 430, 682, 751, 922, 1000
Hpy166II	GTNNAC	7 cut(s)	220, 352, 438, 880, 898, 991, 997
Hpy188I	TCNGA	2 cut(s)	928, 1109
Hpy188III	TCNNGA	4 cut(s)	488, 688, 712, 1045
Hpy8I	GTNNAC	7 cut(s)	220, 352, 438, 880, 898, 991, 997
Hpy99I	CGWCG	6 cut(s)	68, 494, 583, 902, 932, 986
HpyAV	CCTTC	1 cut(s)	268
HpyCH4III	ACNGT	1 cut(s)	76
HpyCH4IV	ACGT	8 cut(s)	348, 560, 794, 876, 914, 930, 993, 1098
HpyCH4V	TGCA	2 cut(s)	51, 534
HpyF10VI	GCNNNNNNNGC	5 cut(s)	10, 172, 730, 865, 1023
HpyF3I	CTNAG	2 cut(s)	804, 956
HpySE526I	ACGT	8 cut(s)	348, 560, 794, 876, 914, 930, 993, 1098
Hsp92I	GRCGYC	3 cut(s)	137, 393, 1098
Hsp92II	CATG	3 cut(s)	55, 265, 838
HspAI	GCGC	6 cut(s)	137, 463, 482, 515, 641, 838
KasI	GGCGCC	1 cut(s)	136
Kpn2I	TCCGGA	1 cut(s)	687
KroI	GCCGGC	1 cut(s)	401
KroNI	GCCGGC	1 cut(s)	403
KspAI	GTTAAC	1 cut(s)	220
Kzo9I	GATC	7 cut(s)	6, 187, 493, 615, 690, 945, 1030
LguI	GCTCTTC	1 cut(s)	581
LmnI	GCTCC	4 cut(s)	175, 298, 666, 777
Lsp1109I	GCAGC	5 cut(s)	162, 270, 316, 504, 1029
LweI	GCATC	2 cut(s)	543, 648
MaeII	ACGT	8 cut(s)	348, 560, 794, 876, 914, 930, 993, 1098
MaeIII	GTNAC	5 cut(s)	76, 743, 797, 910, 1094
MalI	GATC	7 cut(s)	8, 189, 495, 617, 692, 947, 1032
MbiI	CCGCTC	1 cut(s)	784
MboI	GATC	7 cut(s)	6, 187, 493, 615, 690, 945, 1030
MboII	GAAGA	6 cut(s)	61, 134, 304, 388, 595, 598
MhlI	GDGCHC	1 cut(s)	40
MluCI	AATT	1 cut(s)	811
Mly113I	GGCGCC	1 cut(s)	137
MmeI	TCCRAC	1 cut(s)	951
MroI	TCCGGA	1 cut(s)	687
MroNI	GCCGGC	1 cut(s)	401
MroXI	GAANNNNTTC	1 cut(s)	590
MseI	TTAA	1 cut(s)	219
MslI	CAYNNNNRTG	1 cut(s)	875
MspA1I	CMGCKG	4 cut(s)	175, 283, 433, 751
MvaI	CCWGG	4 cut(s)	134, 235, 677, 973
MvnI	CGCG	8 cut(s)	463, 482, 515, 578, 643, 656, 840, 1046
MwoI	GCNNNNNNNGC	5 cut(s)	10, 172, 730, 865, 1023
NaeI	GCCGGC	1 cut(s)	403
NarI	GGCGCC	1 cut(s)	137
NciI	CCSGG	6 cut(s)	214, 215, 407, 499, 889, 908
NdeII	GATC	7 cut(s)	6, 187, 493, 615, 690, 945, 1030
NgoMIV	GCCGGC	1 cut(s)	401
NlaIII	CATG	3 cut(s)	55, 265, 838
NlaIV	GGNNCC	4 cut(s)	138, 324, 710, 936
NmeAIII	GCCGAG	2 cut(s)	585, 709
NmuCI	GTSAC	4 cut(s)	76, 743, 910, 1094
NruI	TCGCGA	1 cut(s)	1046
NspI	RCATGY	2 cut(s)	55, 838
NspV	TTCGAA	1 cut(s)	419
OliI	CACNNNNGTG	1 cut(s)	875
PaeI	GCATGC	1 cut(s)	55
PaeR7I	CTCGAG	1 cut(s)	223
PaqCI	CACCTGC	1 cut(s)	658
PciSI	GCTCTTC	1 cut(s)	581
PcsI	WCGNNNNNNNCGW	7 cut(s)	72, 354, 486, 575, 624, 927, 990
PdiI	GCCGGC	1 cut(s)	403
PdmI	GAANNNNTTC	1 cut(s)	590
PfeI	GAWTC	4 cut(s)	204, 309, 342, 366
Pfl23II	CGTACG	1 cut(s)	624
PflMI	CCANNNNNTGG	1 cut(s)	1008
PluTI	GGCGCC	1 cut(s)	140
PmaCI	CACGTG	2 cut(s)	795, 877
PmlI	CACGTG	2 cut(s)	795, 877
Ppu21I	YACGTR	3 cut(s)	561, 795, 877
PpuMI	RGGWCCY	1 cut(s)	709
Psp5II	RGGWCCY	1 cut(s)	709
Psp6I	CCWGG	4 cut(s)	132, 233, 675, 971
PspCI	CACGTG	2 cut(s)	795, 877
PspFI	CCCAGC	1 cut(s)	429
PspGI	CCWGG	4 cut(s)	132, 233, 675, 971
PspLI	CGTACG	1 cut(s)	624
PspN4I	GGNNCC	4 cut(s)	138, 324, 710, 936
PspPI	GGNCC	8 cut(s)	322, 647, 709, 759, 885, 935, 969, 1011
PspPPI	RGGWCCY	1 cut(s)	709
PspXI	VCTCGAGB	1 cut(s)	223
RruI	TCGCGA	1 cut(s)	1046
RsaI	GTAC	6 cut(s)	239, 338, 563, 626, 917, 977
RsaNI	GTAC	6 cut(s)	238, 337, 562, 625, 916, 976
RseI	CAYNNNNRTG	1 cut(s)	875
SalI	GTCGAC	1 cut(s)	896
SapI	GCTCTTC	1 cut(s)	581
SaqAI	TTAA	1 cut(s)	219
Sau3AI	GATC	7 cut(s)	6, 187, 493, 615, 690, 945, 1030
Sau96I	GGNCC	8 cut(s)	322, 647, 709, 759, 885, 935, 969, 1011
SduI	GDGCHC	1 cut(s)	40
SfaNI	GCATC	2 cut(s)	543, 648
SfoI	GGCGCC	1 cut(s)	138
Sfr274I	CTCGAG	1 cut(s)	223
SfuI	TTCGAA	1 cut(s)	419
SinI	GGWCC	4 cut(s)	709, 759, 885, 1011
SlaI	CTCGAG	1 cut(s)	223
SmaI	CCCGGG	1 cut(s)	215
SmiMI	CAYNNNNRTG	1 cut(s)	875
SmlI	CTYRAG	1 cut(s)	223
SmoI	CTYRAG	1 cut(s)	223
SphI	GCATGC	1 cut(s)	55
Sse9I	AATT	1 cut(s)	811
SspDI	GGCGCC	1 cut(s)	136
TaaI	ACNGT	1 cut(s)	76
TaiI	ACGT	8 cut(s)	351, 563, 797, 879, 917, 933, 996, 1101
TaqI	TCGA	8 cut(s)	224, 419, 489, 506, 581, 597, 897, 1071
TasI	AATT	1 cut(s)	811
TatI	WGTACW	1 cut(s)	336
TauI	GCSGC	6 cut(s)	212, 232, 468, 578, 641, 754
TfiI	GAWTC	4 cut(s)	204, 309, 342, 366
Tru1I	TTAA	1 cut(s)	219
Tru9I	TTAA	1 cut(s)	219
TseFI	GTSAC	4 cut(s)	76, 743, 910, 1094
TseI	GCWGC	5 cut(s)	175, 283, 304, 517, 1017
Tsp45I	GTSAC	4 cut(s)	76, 743, 910, 1094
TspDTI	ATGAA	3 cut(s)	250, 404, 583
TspGWI	ACGGA	1 cut(s)	372
TspMI	CCCGGG	1 cut(s)	213
Van91I	CCANNNNNTGG	1 cut(s)	1008
VpaK11BI	GGWCC	4 cut(s)	709, 759, 885, 1011
XceI	RCATGY	2 cut(s)	55, 838
XcmI	CCANNNNNNNNNTGG	1 cut(s)	945
XhoI	CTCGAG	1 cut(s)	223
XmaI	CCCGGG	1 cut(s)	213
XmiI	GTMKAC	1 cut(s)	897
XmnI	GAANNNNTTC	1 cut(s)	590
ZraI	GACGTC	1 cut(s)	1099

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.