pycom08g05590

aminopeptidase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr8
Physical Location & Seq
Forward (+)
4257022 .. 4260453
3432 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom08g05590.12

Sequence Viewer

Length: 1917 bp
ATGCTATATTTTGCTGTGCCATACCCGTTGCCCAAATTGGATATGGTTGCAATACCTGATTTTTCTTTAGGCGCCATGGAGAATTATGGTTTAGTTACATACCGAGAAATAGTTTTGCTTTTTGATGAACAACATTCTGCAGCTGCCAACAAGCAAAGGGTTACGATTGCCGTGGCACATGAATTGGCACACCAGTGGTTTGGCAATCTTGTAACAAAGGAATGGTGGACGCATTTATGGCTGAATGAGGGATTTGCAACATGGGTGAGCTATTTAGCTACTGATAGCTTATTCCCAGAGTGGAAAATATGGACTCAGTTTCTTGATGAAGTCACTGCTGGTCTTAAGCTGGATGGGCTTGAAGAATCTCACCCCATTGAGGTGGAGATCGATCATGCTGCTGAGATTGATGAAATACTTGATGCGATAAGTTATAAAAAAGGTGCTGCTGTTATTCGGATGCTACAAAGCTATCTAGGTGCTGAAGTCTTCCAGAGGTCACTTGCTTCATATATCAAAAAGCATGCTTACTCAAATGCAAAGACAGAAGATTTGTGGGCTGCCCTTGAGGAGGGATCTGGTGAACCTGTAAACAAACTAATGAGTTCATGGACACAGCAGAAGGGTTACCCGGTTATTTCTGTCAAAGTCAAAGATCAAAAACTGGAGTTTAATCAGACACAATTCTACTCAAGCGGTTCCCAAGGCGATGGGCAATGGATTGTGCCGATCACATTATCCTGTGGCTCGTATGATGTACGCAAGAATTTCCTACTACAAGCGAAGTCTGAAACTCTTGACATAAAGGAATTTCTGGGTTGCTCAGTAGGAAAGGCTGGATGTGGAGGCACAAGCAACAAAGACAATGCTTTATGCAGTTGGATAAAAGTCAATGTGGATCAGACTGGGTTTTACAGAGTGAAATATGAGGATGAACTTGCAGCTGCGCTTAGAAACGCTATCGAAAAGAAGCAATTGTCTGAAACTGACAGATTTGGCATTTTGGATGATTCCTTTGCCCTATCAATGGCCTGCAAGCAGTCTTTTGCTTCATTGCTTACCTTGTTGAGTGCATACAGAGAGGAACTTGACTATATCGTGCTGTCAAATTTGATTACTATAAGTTATAATCTGGCAAGAATTGCAGCCGATGCTGTACCCGGACTAATCGATCACATTAAACAATTCTTTATTGGACTTTTCCAGTATTCTGCGGAGAGGCTAGGTTGGCAGCCTAAACCGGGCGAAAGCCATTTAGATGCAATGTTGAGAGGAGAAATTTTGACTGCACTTGCTGTTTTTGGTCATGACCTGACGTTAGATGAAGCAAGTAGGCGTTTTCATGCCTTTATAGAAGACAGAAACACGCCCCTCCTTCCCCCAGACATTAGAAAGGCAGCATATGTGGCTTTAATGCAAAGAACAAGCGTATCTGACCGATCAATCTATGAATCTCTTGTTAGAATCTACAGAGAGAGTGATCTAAGCCAGGAGAAAACCCGCATTCTAGGTTCTTTAGCGTCTTGTCCCGATCCCAGTATTACACTGGAAGTTCTCCACTTTATATTGACTCCTGAGGTTCGCAGTCAGGATGCTGTATTTGGACTTGCTGTTAGTAATGAAGGTCGGGAAACAGCATGGACGTGGATGAAGGATAACTGGGAGCACATCTCAAATACCTGGGGGTCTGGATTACTAATTCCTCGCTTTGTCAGTGAAATTGTTTCACCGTTTGCTTCATTTGACAAGGCTAAGGAAGTAGATGAGTTCTTCAAAGCACATCCAAACCCGAAGATAACTAGAACAGTGAAGCAGAGCATTGAGCGGGTGCAAATCAACGCCAAATGGGTTCAGAGTGTTCAGAGCGAGAGAAACCTTGCCGATGTCGCGACGGAGTTGGCATACCAGAAATACTAG

Protein Analysis

639

Amino Acids

72.04

Weight (kDa)

5.32

Isoelectric Point (pI)

35.93

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0000648)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 435, 1128
AccB1I GGYRCC 1 cut(s) 71
AccBSI CCGCTC 1 cut(s) 1825
AccII CGCG 1 cut(s) 1889
AciI CCGC 4 cut(s) 696, 1214, 1501, 1825
AclWI GGATC 3 cut(s) 583, 906, 1526
AcsI RAATTY 4 cut(s) 766, 809, 1108, 1278
AcuI CTGAAG 1 cut(s) 504
AcyI GRCGYC 1 cut(s) 72
AfaI GTAC 2 cut(s) 759, 1158
AfiI CCNNNNNNNGG 4 cut(s) 379, 571, 1027, 1241
AflII CTTAAG 1 cut(s) 344
AgsI TTSAA 2 cut(s) 362, 1774
AjiI CACGTC 1 cut(s) 1644
AjnI CCWGG 2 cut(s) 1488, 1679
AleI CACNNNNGTG 1 cut(s) 193
AluBI AGCT 7 cut(s) 143, 270, 278, 288, 349, 471, 944
AluI AGCT 7 cut(s) 143, 270, 278, 288, 349, 471, 944
Alw21I GWGCWC 1 cut(s) 1668
AlwI GGATC 3 cut(s) 583, 906, 1526
AoxI GGCC 1 cut(s) 1029
ApoI RAATTY 4 cut(s) 766, 809, 1108, 1278
ArsI GACNNNNNNTTYG 2 cut(s) 535, 567
AspLEI GCGC 2 cut(s) 74, 949
AsuC2I CCSGG 3 cut(s) 632, 1161, 1242
AsuHPI GGTGA 4 cut(s) 277, 362, 593, 1719
AxyI CCTNAGG 1 cut(s) 1575
BaeI ACNNNNGTAYC 2 cut(s) 1413, 1446
BanI GGYRCC 1 cut(s) 71
BbsI GAAGAC 2 cut(s) 481, 1362
Bbv12I GWGCWC 1 cut(s) 1668
BccI CCATC 2 cut(s) 347, 704
BceAI ACGGC 1 cut(s) 155
BcgI CGANNNNNNTGC 2 cut(s) 380, 414
BciT130I CCWGG 2 cut(s) 1490, 1681
BcnI CCSGG 3 cut(s) 632, 1161, 1242
BfaI CTAG 5 cut(s) 476, 1223, 1508, 1800, 1915
BfmI CTRYAG 2 cut(s) 138, 1468
BfoI RGCGCY 1 cut(s) 75
BfrI CTTAAG 1 cut(s) 344
Bme1390I CCNGG 5 cut(s) 632, 1161, 1242, 1490, 1681
BmgBI CACGTC 1 cut(s) 1644
BmiI GGNNCC 2 cut(s) 73, 700
BmrFI CCNGG 5 cut(s) 632, 1161, 1242, 1490, 1681
BmrI ACTGGG 3 cut(s) 915, 1530, 1669
BmsI GCATC 5 cut(s) 412, 450, 1141, 1249, 1582
BmuI ACTGGG 3 cut(s) 915, 1530, 1669
BpiI GAAGAC 2 cut(s) 481, 1362
BplI GAGNNNNNCTC 2 cut(s) 1655, 1687
BpmI CTGGAG 1 cut(s) 686
Bpu10I CCTNAGC 1 cut(s) 1752
BpuEI CTTGAG 2 cut(s) 587, 676
BpuMI CCSGG 3 cut(s) 632, 1161, 1242
Bsa29I ATCGAT 2 cut(s) 390, 1170
BsaHI GRCGYC 1 cut(s) 72
BsaJI CCNNGG 4 cut(s) 75, 171, 703, 1680
Bsc4I CCNNNNNNNGG 4 cut(s) 379, 571, 1027, 1241
Bse1I ACTGG 7 cut(s) 193, 669, 910, 1204, 1536, 1551, 1664
Bse21I CCTNAGG 1 cut(s) 1575
Bse3DI GCAATG 3 cut(s) 722, 1052, 1269
BseBI CCWGG 2 cut(s) 1490, 1681
BseCI ATCGAT 2 cut(s) 390, 1170
BseDI CCNNGG 4 cut(s) 75, 171, 703, 1680
BseGI GGATG 8 cut(s) 358, 465, 845, 937, 1012, 1597, 1653, 1780
BseLI CCNNNNNNNGG 4 cut(s) 379, 571, 1027, 1241
BseMI GCAATG 3 cut(s) 722, 1052, 1269
BseMII CTCAG 4 cut(s) 329, 393, 837, 1566
BseNI ACTGG 7 cut(s) 193, 669, 910, 1204, 1536, 1551, 1664
BseRI GAGGAG 2 cut(s) 584, 1287
BsgI GTGCAG 1 cut(s) 1272
Bsh1236I CGCG 1 cut(s) 1889
BshFI GGCC 1 cut(s) 1031
BshNI GGYRCC 1 cut(s) 71
BshVI ATCGAT 2 cut(s) 390, 1170
BsiHKAI GWGCWC 1 cut(s) 1668
BsiSI CCGG 3 cut(s) 632, 1161, 1241
BslFI GGGAC 1 cut(s) 1512
BslI CCNNNNNNNGG 4 cut(s) 379, 571, 1027, 1241
BsmFI GGGAC 1 cut(s) 1512
BsmI GAATGC 1 cut(s) 1503
BsnI GGCC 1 cut(s) 1031
Bsp1286I GDGCHC 1 cut(s) 1668
Bsp19I CCATGG 1 cut(s) 75
Bsp68I TCGCGA 1 cut(s) 1889
BspACI CCGC 4 cut(s) 696, 1214, 1501, 1825
BspANI GGCC 1 cut(s) 1031
BspCNI CTCAG 4 cut(s) 328, 394, 836, 1567
BspDI ATCGAT 2 cut(s) 390, 1170
BspFNI CGCG 1 cut(s) 1889
BspHI TCATGA 1 cut(s) 1306
BspLI GGNNCC 2 cut(s) 73, 700
BspMAI CTGCAG 1 cut(s) 142
BspPI GGATC 3 cut(s) 583, 906, 1526
BspT107I GGYRCC 1 cut(s) 71
BspTI CTTAAG 1 cut(s) 344
BsrBI CCGCTC 1 cut(s) 1825
BsrDI GCAATG 3 cut(s) 722, 1052, 1269
BsrI ACTGG 7 cut(s) 193, 669, 910, 1204, 1536, 1551, 1664
BssECI CCNNGG 4 cut(s) 75, 171, 703, 1680
BssNI GRCGYC 1 cut(s) 72
BssT1I CCWWGG 2 cut(s) 75, 703
Bst2UI CCWGG 2 cut(s) 1490, 1681
Bst4CI ACNGT 2 cut(s) 1731, 1807
BstACI GRCGYC 1 cut(s) 72
BstAFI CTTAAG 1 cut(s) 344
BstAPI GCANNNNNTGC 2 cut(s) 1142, 1151
BstC8I GCNNGC 3 cut(s) 525, 1033, 1037
BstDEI CTNAG 7 cut(s) 315, 402, 823, 950, 1484, 1575, 1752
BstDSI CCRYGG 2 cut(s) 75, 171
BstEII GGTNACC 1 cut(s) 626
BstENI CCTNNNNNAGG 1 cut(s) 569
BstF5I GGATG 8 cut(s) 358, 465, 845, 937, 1012, 1597, 1653, 1780
BstFNI CGCG 1 cut(s) 1889
BstH2I RGCGCY 1 cut(s) 75
BstHHI GCGC 2 cut(s) 74, 949
BstMWI GCNNNNNNNGC 7 cut(s) 238, 355, 1142, 1151, 1228, 1406, 1886
BstNI CCWGG 2 cut(s) 1490, 1681
BstNSI RCATGY 1 cut(s) 527
BstPI GGTNACC 1 cut(s) 626
BstSCI CCNGG 5 cut(s) 630, 1159, 1240, 1488, 1679
BstSFI CTRYAG 2 cut(s) 138, 1468
BstUI CGCG 1 cut(s) 1889
BstV2I GAAGAC 2 cut(s) 481, 1362
BstX2I RGATCY 1 cut(s) 575
BstXI CCANNNNNNTGG 3 cut(s) 200, 382, 710
BstYI RGATCY 1 cut(s) 575
Bsu15I ATCGAT 2 cut(s) 390, 1170
Bsu36I CCTNAGG 1 cut(s) 1575
BsuRI GGCC 1 cut(s) 1031
BsuTUI ATCGAT 2 cut(s) 390, 1170
BtgI CCRYGG 2 cut(s) 75, 171
BtgZI GCGATG 1 cut(s) 723
BtrI CACGTC 1 cut(s) 1644
BtsCI GGATG 8 cut(s) 358, 465, 845, 937, 1012, 1597, 1653, 1780
BtsI GCAGTG 1 cut(s) 333
BtsIMutI CAGTG 5 cut(s) 200, 333, 1544, 1720, 1812
BtuMI TCGCGA 1 cut(s) 1889
Cac8I GCNNGC 3 cut(s) 525, 1033, 1037
CciI TCATGA 1 cut(s) 1306
CfoI GCGC 2 cut(s) 74, 949
ClaI ATCGAT 2 cut(s) 390, 1170
CseI GACGC 2 cut(s) 238, 1509
Csp6I GTAC 2 cut(s) 758, 1157
CviAII CATG 9 cut(s) 76, 179, 261, 395, 524, 609, 1307, 1343, 1638
CviQI GTAC 2 cut(s) 758, 1157
DdeI CTNAG 7 cut(s) 315, 402, 823, 950, 1484, 1575, 1752
DinI GGCGCC 1 cut(s) 73
Eco130I CCWWGG 2 cut(s) 75, 703
Eco57I CTGAAG 1 cut(s) 504
Eco81I CCTNAGG 1 cut(s) 1575
Eco91I GGTNACC 1 cut(s) 626
EcoNI CCTNNNNNAGG 1 cut(s) 569
EcoO65I GGTNACC 1 cut(s) 626
EcoRII CCWGG 2 cut(s) 1488, 1679
EcoT14I CCWWGG 2 cut(s) 75, 703
EgeI GGCGCC 1 cut(s) 73
EheI GGCGCC 1 cut(s) 73
ErhI CCWWGG 2 cut(s) 75, 703
FaeI CATG 9 cut(s) 79, 182, 264, 398, 527, 612, 1310, 1346, 1641
FaqI GGGAC 1 cut(s) 1512
FatI CATG 9 cut(s) 75, 178, 260, 394, 523, 608, 1306, 1342, 1637
FauI CCCGC 2 cut(s) 1508, 1818
FauNDI CATATG 1 cut(s) 1402
FokI GGATG 8 cut(s) 365, 472, 852, 944, 1019, 1604, 1660, 1767
FspBI CTAG 5 cut(s) 476, 1223, 1508, 1800, 1915
GlaI GCGC 2 cut(s) 73, 948
GsuI CTGGAG 1 cut(s) 686
HaeII RGCGCY 1 cut(s) 75
HaeIII GGCC 1 cut(s) 1031
HapII CCGG 3 cut(s) 632, 1161, 1241
HgaI GACGC 2 cut(s) 238, 1509
HhaI GCGC 2 cut(s) 74, 949
Hin1I GRCGYC 1 cut(s) 72
Hin1II CATG 9 cut(s) 79, 182, 264, 398, 527, 612, 1310, 1346, 1641
Hin6I GCGC 2 cut(s) 72, 947
HinP1I GCGC 2 cut(s) 72, 947
HinfI GANTC 6 cut(s) 313, 365, 1010, 1451, 1464, 1570
HpaII CCGG 3 cut(s) 632, 1161, 1241
HphI GGTGA 4 cut(s) 277, 362, 593, 1719
Hpy166II GTNNAC 3 cut(s) 228, 584, 592
Hpy188I TCNGA 8 cut(s) 459, 678, 790, 903, 982, 1435, 1854, 1863
Hpy8I GTNNAC 3 cut(s) 228, 584, 592
Hpy99I CGWCG 1 cut(s) 1894
HpyAV CCTTC 4 cut(s) 616, 1385, 1616, 1645
HpyCH4III ACNGT 2 cut(s) 1731, 1807
HpyCH4IV ACGT 2 cut(s) 1316, 1643
HpyF10VI GCNNNNNNNGC 7 cut(s) 238, 355, 1142, 1151, 1228, 1406, 1886
HpyF3I CTNAG 7 cut(s) 315, 402, 823, 950, 1484, 1575, 1752
HpySE526I ACGT 2 cut(s) 1316, 1643
Hsp92I GRCGYC 1 cut(s) 72
Hsp92II CATG 9 cut(s) 79, 182, 264, 398, 527, 612, 1310, 1346, 1641
HspAI GCGC 2 cut(s) 72, 947
KasI GGCGCC 1 cut(s) 71
LmnI GCTCC 1 cut(s) 1663
LweI GCATC 5 cut(s) 412, 450, 1141, 1249, 1582
MaeI CTAG 5 cut(s) 476, 1223, 1508, 1800, 1915
MaeII ACGT 2 cut(s) 1316, 1643
MaeIII GTNAC 6 cut(s) 94, 160, 211, 331, 498, 626
MbiI CCGCTC 1 cut(s) 1825
MboII GAAGA 6 cut(s) 374, 481, 560, 1367, 1762, 1804
MfeI CAATTG 1 cut(s) 974
MflI RGATCY 1 cut(s) 575
MhlI GDGCHC 1 cut(s) 1668
Mly113I GGCGCC 1 cut(s) 72
MlyI GAGTC 2 cut(s) 307, 1564
MmeI TCCRAC 1 cut(s) 860
MseI TTAA 4 cut(s) 345, 672, 1179, 1412
MslI CAYNNNNRTG 4 cut(s) 193, 380, 1257, 1642
MspA1I CMGCKG 2 cut(s) 143, 944
MspCI CTTAAG 1 cut(s) 344
MspI CCGG 3 cut(s) 632, 1161, 1241
MspR9I CCNGG 5 cut(s) 632, 1161, 1242, 1490, 1681
MunI CAATTG 1 cut(s) 974
Mva1269I GAATGC 1 cut(s) 1503
MvaI CCWGG 2 cut(s) 1490, 1681
MvnI CGCG 1 cut(s) 1889
MwoI GCNNNNNNNGC 7 cut(s) 238, 355, 1142, 1151, 1228, 1406, 1886
NarI GGCGCC 1 cut(s) 72
NciI CCSGG 3 cut(s) 632, 1161, 1242
NcoI CCATGG 1 cut(s) 75
NdeI CATATG 1 cut(s) 1402
NlaIII CATG 9 cut(s) 79, 182, 264, 398, 527, 612, 1310, 1346, 1641
NlaIV GGNNCC 2 cut(s) 73, 700
NmuCI GTSAC 2 cut(s) 331, 498
NruI TCGCGA 1 cut(s) 1889
NspI RCATGY 1 cut(s) 527
OliI CACNNNNGTG 1 cut(s) 193
PaeI GCATGC 1 cut(s) 527
PagI TCATGA 1 cut(s) 1306
PctI GAATGC 1 cut(s) 1503
PfeI GAWTC 4 cut(s) 365, 1010, 1451, 1464
PleI GAGTC 2 cut(s) 307, 1564
PluTI GGCGCC 1 cut(s) 75
PpsI GAGTC 2 cut(s) 307, 1564
PsiI TTATAA 2 cut(s) 435, 1128
Psp6I CCWGG 2 cut(s) 1488, 1679
PspEI GGTNACC 1 cut(s) 626
PspGI CCWGG 2 cut(s) 1488, 1679
PspN4I GGNNCC 2 cut(s) 73, 700
PstI CTGCAG 1 cut(s) 142
PsuI RGATCY 1 cut(s) 575
PvuII CAGCTG 2 cut(s) 143, 944
RruI TCGCGA 1 cut(s) 1889
RsaI GTAC 2 cut(s) 759, 1158
RsaNI GTAC 2 cut(s) 758, 1157
RseI CAYNNNNRTG 4 cut(s) 193, 380, 1257, 1642
SaqAI TTAA 4 cut(s) 345, 672, 1179, 1412
SchI GAGTC 2 cut(s) 307, 1564
ScrFI CCNGG 5 cut(s) 632, 1161, 1242, 1490, 1681
SduI GDGCHC 1 cut(s) 1668
SfaNI GCATC 5 cut(s) 412, 450, 1141, 1249, 1582
SfcI CTRYAG 2 cut(s) 138, 1468
SfoI GGCGCC 1 cut(s) 73
SmiMI CAYNNNNRTG 4 cut(s) 193, 380, 1257, 1642
SmlI CTYRAG 3 cut(s) 344, 566, 691
SmoI CTYRAG 3 cut(s) 344, 566, 691
SphI GCATGC 1 cut(s) 527
SsiI CCGC 4 cut(s) 696, 1214, 1501, 1825
SspDI GGCGCC 1 cut(s) 71
SspMI CTAG 5 cut(s) 476, 1223, 1508, 1800, 1915
StyD4I CCNGG 5 cut(s) 630, 1159, 1240, 1488, 1679
StyI CCWWGG 2 cut(s) 75, 703
TaaI ACNGT 2 cut(s) 1731, 1807
TaiI ACGT 2 cut(s) 1319, 1646
TaqI TCGA 3 cut(s) 390, 963, 1170
TaqII GACCGA 1 cut(s) 1452
TfiI GAWTC 4 cut(s) 365, 1010, 1451, 1464
Tru1I TTAA 4 cut(s) 345, 672, 1179, 1412
Tru9I TTAA 4 cut(s) 345, 672, 1179, 1412
TscAI CASTG 5 cut(s) 200, 340, 1551, 1720, 1812
TseFI GTSAC 2 cut(s) 331, 498
Tsp45I GTSAC 2 cut(s) 331, 498
TspGWI ACGGA 1 cut(s) 1907
TspRI CASTG 5 cut(s) 200, 340, 1551, 1720, 1812
Vha464I CTTAAG 1 cut(s) 344
XagI CCTNNNNNAGG 1 cut(s) 569
XapI RAATTY 4 cut(s) 766, 809, 1108, 1278
XceI RCATGY 1 cut(s) 527
XcmI CCANNNNNNNNNTGG 2 cut(s) 40, 1543
XspI CTAG 5 cut(s) 476, 1223, 1508, 1800, 1915
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.