Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr08

Orthogroup ID

OG0000648

Physical Location & Seq

Genomic Coordinates Reverse (-)

5312293 .. 5317663

Gene Structure 5371 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD08G1066400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2661 bp

ATGGAGCAGTTCACAGGCCAGCCCCGGCTTCCGAAATTCGCCGTCCCGAAACGGTACGATGTAAGGCTGAAGCCGGACCTCGCCGCCTGCAAATTCGGCGGCTCCGTCGACATCGACCTCGATGTCGTCGCCGATACCAAATTCATCGTACTCAACGCCGCCGAGCTCTCCGTCAATGCGGGCTCCGTCTCTTTCACTCACGGAGGCTCGTCCAAGGTTTTCAAGCCTTCGAAGGCCGAGACGTTCGAAGAGGATGGAATTTTGGTTTTGGAATTTGGCGAGACGCTTCCGATTGGGTCTGGAGTTTTGGCTATTGAATTTGAAGGAATTTTGAATGACAAGATGAAGGGTTTCTACAGAAGTACATATGAGCACAACGGTGAGAAGAAAAATATGGCAGTTACACAGTTTGAGCCTGTTGATGCCAGGCGGTGCTTTCCGTGCTGGGATGAACCTGCTTGCAAGGCTACATTCAAGATTACCCTTGATGGTGTTCCGTCTGAACTAGTAGCCCTTTCCAACATGCCGATTCAAGAAGAAAAAGTGAATGGGCATCTGAAGACAGTTTCATATGCAGAAACGCCAATTATGTCTACATATTTGGTGGCCGTTGTTGTCGGATTGTTTGATTACGTTGAAGATCATACTTCTGATGGGGTCAAAGTGCGGGTATATTGTCAAGTTGGTAAGGCAGACCAAGGGAAGTTTGCTTTGCACGTTGCTGTCAAGACACTTGAATTGTACAAAGATTACTTTGCCGTGCCATACCTGTTGCCCAAATTGGATATGATTGCAATACCTGATTTTTCTTCCGGTGCCATGGAGAATTATGGTTTAGTTACATACCGAGAAACAGCTTTGCTTTTTGATGAAAAACATTCTGCAGCTGCCAACAAGCAAAGGGTTGCGACTGTCGTGGCACATGAATTGGCACACCAGTGGTTTGGCAATCTTGTAACTATGGAATGGTGGACGCATTTATGGCTGAATGAGGGATTTGCAACATGGGTGAGCTATTTAGCTACTGATAGCTTGTTCCCAGAGTGGAAAATATGGACTCAGTTTCTTGATGAACTCACTGCTGGTCTTAAGCTGGATGGGCTTGAAGAATCTCACCCCATTGAGGTGGAGATCAATCATGCTGCTGAGGTTGATGAAATATTTGATGCGATAAGCTATAAAAAAGGTGCTTCTGTTATTCGGATGCTACAAAGCTATCTAGGTGCTGAAGTCTTCCAGAGGTCACTTGCTTCATATATCAAAAAACATGCTTACTCAAATGCAAAGACAGAAGATTTGTGGGCTGCCCTTGAGGAGGGATCTGGTGAACCTGTAAACAAGCTAATGAATTCATGGACACAGCAAAAAGGTTACCCGGTTATTTCTGTCAAAATCAAAGATCAGAAATTGGAGTTTGATCAGACACAATTCTACTCAAGCGGTTCCCAAGGCGATGGGCAATGGATTGTGCCGATCACATTATCCTGTGGCTCGTACGATGTGCGCAAGAATTTCCTACTACAAGCGAAGTCTGAAACTCTTGACATAAAGGAATTTCTGGGTTGCTCAGTAGGAAAGGCTGGATGTGGAGGCACAAGCAACAAAGACAACGCATTATTCAGTTGGATAAAAGTCAATGTGGATCAGACTGGTTTTTACAGAGTGAAATATGAGGATGAACTTGCAGCTGCACTTAGAAACGCTATTGAAAAGAAACAATTGTCTGAAACTGACAGATTTGGCATTTTGGATGATTCATTTGCCCTGTCAATGTCTCGCAAGCAGTCTTTTGCTTCATTGCTTACCTTGTTGAGTGCATACAGAGAGGACCTTGACTATATCGTTCTGTCAAATTTGATTACTATAAGTTATTATCTGGCAAGAATTGCAGCCGATGCTGTACCCGGACTACTGGATCACATTAAACAATTCTTTATTGGACTTTTCCAGTATTCCGCAGAGAGGCTTGGTTGGCAGCCTAAACCCAGCGAAAGCCATTTAGATGCAATGTTGAGAGGAGACGTTTTGAATGCACTTGCTGTTTTTGGTCATGACCTGACGTTAGATGAAGCAAGTAGGCGTTTTCATGCCTTTTTAGAAGACAGAAACACGCCCCTCCTTCCCCCTGACATTAGAAAGGCAGCATATGTGGCTGTAATGCAAAGAACAAGTGTATCTAACCGATCAGGCTACGAATCTCTTCTTAGAGTCTACAGAGAGAGTGATCTAAGCCAGGAGAAAACCCGCATTCTAGGTTCATTAGCGTCTTGTCCCGATCCCAATATTACACTGGAGGTTCTCAACTTTATATTGACTCCTGAGGTTCGCAGTCAGGATGCTGTCTTTGGGCTTGCTGTTAGTAATGAAGGTCGGGAAACAGCTTGGACGTGGATGAAGGATAACTGGGAGCACATCTCAAAGACCTGGGGGTCTGGATTTCTAATCACTCGCTTTGTCAGTTCAATTGTTTCACCGTTTGCTTCGTTTGACAAGGTTAAGGAAGTAGATGAGTTCTTCAACGCCCGTCGAAACCCGGCGATAACTAGAACCTTGAAGCAGAGCATTGAACGGGTGCAAATCAACGCCAAGTGGGTTCAGAGTGTTCAGAGCGAGAAAGACCTTGCCGACGTCGTGACGGAGTTGGCACGCCGGAAATACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001666 GO:0003674 GO:0003824 GO:0004177 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0006508 GO:0006518 GO:0006807 GO:0006810 GO:0006950 GO:0008144 GO:0008150 GO:0008152 GO:0008233 GO:0008235 GO:0008237 GO:0008238 GO:0008270 GO:0009056 GO:0009628 GO:0009914 GO:0009926 GO:0009987 GO:0010013 GO:0010817 GO:0016020 GO:0016787 GO:0019538 GO:0031090 GO:0031406 GO:0033218 GO:0033293 GO:0033554 GO:0034641 GO:0036094 GO:0036293 GO:0036294 GO:0042221 GO:0042277 GO:0043167 GO:0043168 GO:0043169 GO:0043170 GO:0043171 GO:0043177 GO:0043226 GO:0043227 GO:0043603 GO:0044237 GO:0044238 GO:0044248 GO:0044422 GO:0044424 GO:0044444 GO:0044464 GO:0046872 GO:0046914 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0060918 GO:0065007 GO:0065008 GO:0070006 GO:0070011 GO:0070482 GO:0070887 GO:0071453 GO:0071456 GO:0071704 GO:0071944 GO:0097159 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ERAP1_C Peptidase_M1

Protein Analysis

887

Amino Acids

99.51

Weight (kDa)

5.45

Isoelectric Point (pI)

36.18

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Peptidase_M1_N	PF17900	15 - 201	1.6e-48	Peptidase M1 N-terminal domain
Peptidase_M1	PF01433	236 - 452	8.3e-90	Peptidase family M1 domain
ERAP1_C	PF11838	542 - 859	1.4e-81	ERAP1-like C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000648)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G33090
fragaria_vesca	FvH4_2g31431 FvH4_2g31440 FvH4_6g34250 FvH4_6g34262 FvH4_6g34263
malus_domestica	MD08G1066400.v1.1 MD08G1066500.v1.1 MD08G1067400.v1.1 MD09G1070300.v1.1 MD09G1187200.v1.1 MD10G1090900.v1.1 MD15G1054400.v1.1 MD17G1171400.v1.1
prunus_persica	Prupe.1G407900_v2.0.a1 Prupe.1G408000_v2.0.a1 Prupe.1G408000_v2.0.a1 Prupe.1G408000_v2.0.a1 Prupe.1G457300_v2.0.a1 Prupe.3G044500_v2.0.a1 Prupe.3G044500_v2.0.a1
pyrus_communis	pycom08g05520 pycom08g05550 pycom08g05560 pycom08g05590 pycom09g10370 pycom09g10380 pycom10g07440 pycom10g07460 pycom15g05130 pycom15g05150 pycom17g16900
rosa_chinensis	RchiOBHm_Chr2g0144571 RchiOBHm_Chr2g0144611 RchiOBHm_Chr4g0390591 RchiOBHm_Chr6g0311371 RchiOBHm_Chr6g0311381
rosa_laevigata	RLG00000009010 RLG00000009289 RLG00000010411 RLG00000010412 RLG00000020090 RLG00000020092 RLG00000036974
rosa_multiflora	Rmu_co8212940.1_g000001 Rmu_sc0005789.1_g000001 Rmu_sc0008536.1_g000010 Rmu_sc0008536.1_g000011 Rmu_sc0009300.1_g000002
rosa_roxburghii	Rroxscaffold_1G00056400 Rroxscaffold_2G00084720 Rroxscaffold_2G00101200 Rroxscaffold_7G00157670 Rroxscaffold_7G00157680
rosa_rugosa	Rorug02G0387900 Rorug02G0388000 Rorug02G0388100 Rorug06G0388300 Rorug06G0388400
rosa_samantha	Rh2AG440000 Rh2AG440100 Rh2BG450000 Rh2BG450300 Rh2BG450500 Rh2CG427000 Rh2CG427200 Rh2DG459900 Rh2DG460300 Rh2DG460500 Rh6AG502600 Rh6AG502700 Rh6BG513300 Rh6CG519100 Rh6CG519200
rosa_wichuraiana	Rw2G036000 Rw6G043770 Rw6G043780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	122, 2428
AatII	GACGTC	1 cut(s)	2631
Acc16I	TGCGCA	1 cut(s)	1505
Acc36I	ACCTGC	1 cut(s)	463
AccB1I	GGYRCC	1 cut(s)	815
AccI	GTMKAC	3 cut(s)	108, 593, 2211
AciI	CCGC	9 cut(s)	84, 99, 159, 179, 430, 667, 1440, 1956, 2245
AclWI	GGATC	4 cut(s)	1327, 1650, 1923, 2270
AcoI	YGGCCR	1 cut(s)	606
AcuI	CTGAAG	3 cut(s)	89, 578, 1248
AcyI	GRCGYC	1 cut(s)	2628
AfaI	GTAC	6 cut(s)	56, 150, 364, 743, 1496, 1902
AfiI	CCNNNNNNNGG	3 cut(s)	1123, 1315, 1962
AflII	CTTAAG	1 cut(s)	1088
AhlI	ACTAGT	1 cut(s)	505
AjiI	CACGTC	1 cut(s)	2388
AjnI	CCWGG	3 cut(s)	425, 2232, 2423
AleI	CACNNNNGTG	2 cut(s)	378, 937
Alw21I	GWGCWC	3 cut(s)	168, 375, 2412
Alw26I	GTCTC	5 cut(s)	193, 233, 275, 1779, 2013
AlwI	GGATC	4 cut(s)	1327, 1650, 1923, 2270
AoxI	GGCC	3 cut(s)	16, 234, 606
ApeKI	GCWGC	9 cut(s)	884, 887, 1142, 1304, 1685, 1688, 1889, 1975, 2141
ArsI	GACNNNNNNTTYG	2 cut(s)	1279, 1311
Asp700I	GAANNNNTTC	2 cut(s)	350, 2199
AspLEI	GCGC	1 cut(s)	1506
AspS9I	GGNCC	2 cut(s)	76, 1828
AsuC2I	CCSGG	4 cut(s)	25, 1376, 1905, 2534
AsuHPI	GGTGA	5 cut(s)	392, 1021, 1106, 1337, 2463
AsuII	TTCGAA	2 cut(s)	230, 246
AvaII	GGWCC	2 cut(s)	76, 1828
AxyI	CCTNAGG	1 cut(s)	2319
BaeI	ACNNNNGTAYC	2 cut(s)	2157, 2190
BanI	GGYRCC	1 cut(s)	815
BanII	GRGCYC	2 cut(s)	168, 185
BarI	GAAGNNNNNNTAC	2 cut(s)	338, 370
BbsI	GAAGAC	3 cut(s)	566, 1225, 2106
Bbv12I	GWGCWC	3 cut(s)	168, 375, 2412
BbvCI	CCTCAGC	1 cut(s)	1146
BbvI	GCAGC	9 cut(s)	874, 896, 1129, 1291, 1675, 1697, 1901, 1987, 2153
BccI	CCATC	5 cut(s)	248, 482, 647, 1091, 1448
BceAI	ACGGC	3 cut(s)	26, 593, 743
BciT130I	CCWGG	3 cut(s)	427, 2234, 2425
BclI	TGATCA	1 cut(s)	1417
BcnI	CCSGG	4 cut(s)	25, 1376, 1905, 2534
BcoDI	GTCTC	5 cut(s)	193, 233, 275, 1779, 2013
BcuI	ACTAGT	1 cut(s)	505
BfaI	CTAG	5 cut(s)	506, 1220, 2252, 2544, 2659
BfmI	CTRYAG	3 cut(s)	355, 882, 2212
BfrI	CTTAAG	1 cut(s)	1088
BfuAI	ACCTGC	1 cut(s)	463
Bme1390I	CCNGG	7 cut(s)	25, 427, 1376, 1905, 2234, 2425, 2534
Bme18I	GGWCC	2 cut(s)	76, 1828
BmgBI	CACGTC	1 cut(s)	2388
BmgT120I	GGNCC	2 cut(s)	76, 1828
BmiI	GGNNCC	4 cut(s)	103, 184, 817, 1444
BmrFI	CCNGG	7 cut(s)	25, 427, 1376, 1905, 2234, 2425, 2534
BmrI	ACTGGG	1 cut(s)	2413
BmsI	GCATC	7 cut(s)	412, 562, 1156, 1194, 1885, 1993, 2326
BmuI	ACTGGG	1 cut(s)	2413
BpiI	GAAGAC	3 cut(s)	566, 1225, 2106
BplI	GAGNNNNNCTC	2 cut(s)	2399, 2431
BpmI	CTGGAG	2 cut(s)	321, 2312
Bpu10I	CCTNAGC	1 cut(s)	1146
Bpu14I	TTCGAA	2 cut(s)	230, 246
BpuEI	CTTGAG	2 cut(s)	1331, 1420
BpuMI	CCSGG	4 cut(s)	25, 1376, 1905, 2534
BsaHI	GRCGYC	1 cut(s)	2628
BsaJI	CCNNGG	6 cut(s)	23, 213, 697, 819, 1447, 2424
BsaWI	WCCGGW	1 cut(s)	812
Bsc4I	CCNNNNNNNGG	3 cut(s)	1123, 1315, 1962
Bse1I	ACTGG	6 cut(s)	937, 1654, 1917, 1948, 2295, 2408
Bse21I	CCTNAGG	1 cut(s)	2319
Bse3DI	GCAATG	3 cut(s)	1466, 1796, 2013
BseBI	CCWGG	3 cut(s)	427, 2234, 2425
BseDI	CCNNGG	6 cut(s)	23, 213, 697, 819, 1447, 2424
BseGI	GGATG	9 cut(s)	259, 454, 1102, 1209, 1589, 1681, 1756, 2341, 2397
BseLI	CCNNNNNNNGG	3 cut(s)	1123, 1315, 1962
BseMI	GCAATG	3 cut(s)	1466, 1796, 2013
BseMII	CTCAG	4 cut(s)	1073, 1137, 1581, 2310
BseNI	ACTGG	6 cut(s)	937, 1654, 1917, 1948, 2295, 2408
BseRI	GAGGAG	2 cut(s)	1328, 2031
BseXI	GCAGC	9 cut(s)	874, 896, 1129, 1291, 1675, 1697, 1901, 1987, 2153
BseYI	CCCAGC	2 cut(s)	444, 1985
BsgI	GTGCAG	1 cut(s)	1674
BshFI	GGCC	3 cut(s)	18, 236, 608
BshNI	GGYRCC	1 cut(s)	815
BsiHKAI	GWGCWC	3 cut(s)	168, 375, 2412
BsiSI	CCGG	7 cut(s)	25, 74, 813, 1376, 1905, 2534, 2650
BsiWI	CGTACG	1 cut(s)	1494
BslFI	GGGAC	2 cut(s)	29, 2256
BslI	CCNNNNNNNGG	3 cut(s)	1123, 1315, 1962
BsmAI	GTCTC	5 cut(s)	193, 233, 275, 1779, 2013
BsmBI	CGTCTC	4 cut(s)	193, 233, 275, 2013
BsmFI	GGGAC	2 cut(s)	29, 2256
BsmI	GAATGC	2 cut(s)	2035, 2247
BsnI	GGCC	3 cut(s)	18, 236, 608
Bsp119I	TTCGAA	2 cut(s)	230, 246
Bsp1286I	GDGCHC	4 cut(s)	168, 185, 375, 2412
Bsp1407I	TGTACA	1 cut(s)	741
Bsp19I	CCATGG	1 cut(s)	819
BspACI	CCGC	9 cut(s)	84, 99, 159, 179, 430, 667, 1440, 1956, 2245
BspANI	GGCC	3 cut(s)	18, 236, 608
BspCNI	CTCAG	4 cut(s)	1072, 1138, 1580, 2311
BspHI	TCATGA	1 cut(s)	2050
BspLI	GGNNCC	4 cut(s)	103, 184, 817, 1444
BspMAI	CTGCAG	1 cut(s)	886
BspMI	ACCTGC	1 cut(s)	463
BspPI	GGATC	4 cut(s)	1327, 1650, 1923, 2270
BspT104I	TTCGAA	2 cut(s)	230, 246
BspT107I	GGYRCC	1 cut(s)	815
BspTI	CTTAAG	1 cut(s)	1088
BsrDI	GCAATG	3 cut(s)	1466, 1796, 2013
BsrGI	TGTACA	1 cut(s)	741
BsrI	ACTGG	6 cut(s)	937, 1654, 1917, 1948, 2295, 2408
BssECI	CCNNGG	6 cut(s)	23, 213, 697, 819, 1447, 2424
BssNI	GRCGYC	1 cut(s)	2628
BssT1I	CCWWGG	4 cut(s)	213, 697, 819, 1447
Bst2UI	CCWGG	3 cut(s)	427, 2234, 2425
Bst4CI	ACNGT	6 cut(s)	54, 380, 408, 565, 913, 2475
Bst6I	CTCTTC	2 cut(s)	243, 2205
BstACI	GRCGYC	1 cut(s)	2628
BstAFI	CTTAAG	1 cut(s)	1088
BstAPI	GCANNNNNTGC	2 cut(s)	1886, 1895
BstAUI	TGTACA	1 cut(s)	741
BstBI	TTCGAA	2 cut(s)	230, 246
BstC8I	GCNNGC	7 cut(s)	20, 88, 181, 460, 1781, 2352, 2647
BstDEI	CTNAG	7 cut(s)	1059, 1146, 1567, 1694, 2204, 2228, 2319
BstDSI	CCRYGG	1 cut(s)	819
BstEII	GGTNACC	1 cut(s)	1370
BstENI	CCTNNNNNAGG	1 cut(s)	1313
BstF5I	GGATG	9 cut(s)	259, 454, 1102, 1209, 1589, 1681, 1756, 2341, 2397
BstHHI	GCGC	1 cut(s)	1506
BstMAI	GTCTC	5 cut(s)	193, 233, 275, 1779, 2013
BstMWI	GCNNNNNNNGC	9 cut(s)	96, 441, 464, 982, 1099, 1886, 1895, 1972, 2150
BstNI	CCWGG	3 cut(s)	427, 2234, 2425
BstNSI	RCATGY	2 cut(s)	526, 1271
BstPI	GGTNACC	1 cut(s)	1370
BstSCI	CCNGG	7 cut(s)	23, 425, 1374, 1903, 2232, 2423, 2532
BstSFI	CTRYAG	3 cut(s)	355, 882, 2212
BstV1I	GCAGC	9 cut(s)	874, 896, 1129, 1291, 1675, 1697, 1901, 1987, 2153
BstV2I	GAAGAC	3 cut(s)	566, 1225, 2106
BstX2I	RGATCY	1 cut(s)	1319
BstXI	CCANNNNNNTGG	3 cut(s)	944, 1126, 1454
BstYI	RGATCY	1 cut(s)	1319
Bsu36I	CCTNAGG	1 cut(s)	2319
BsuRI	GGCC	3 cut(s)	18, 236, 608
BtgI	CCRYGG	1 cut(s)	819
BtgZI	GCGATG	1 cut(s)	1467
BtrI	CACGTC	1 cut(s)	2388
BtsCI	GGATG	9 cut(s)	259, 454, 1102, 1209, 1589, 1681, 1756, 2341, 2397
BtsI	GCAGTG	1 cut(s)	1077
BtsIMutI	CAGTG	3 cut(s)	944, 1077, 2288
BveI	ACCTGC	1 cut(s)	463
Cac8I	GCNNGC	7 cut(s)	20, 88, 181, 460, 1781, 2352, 2647
CciI	TCATGA	1 cut(s)	2050
CfoI	GCGC	1 cut(s)	1506
Cfr13I	GGNCC	2 cut(s)	76, 1828
CseI	GACGC	3 cut(s)	292, 982, 2253
Csp6I	GTAC	6 cut(s)	55, 149, 363, 742, 1495, 1901
CviAII	CATG	9 cut(s)	523, 820, 923, 1005, 1139, 1268, 1353, 2051, 2087
CviQI	GTAC	6 cut(s)	55, 149, 363, 742, 1495, 1901
DdeI	CTNAG	7 cut(s)	1059, 1146, 1567, 1694, 2204, 2228, 2319
DrdI	GACNNNNNNGTC	2 cut(s)	122, 2428
DseDI	GACNNNNNNGTC	2 cut(s)	122, 2428
EaeI	YGGCCR	1 cut(s)	606
Eam1104I	CTCTTC	2 cut(s)	243, 2205
EarI	CTCTTC	2 cut(s)	243, 2205
Ecl136II	GAGCTC	1 cut(s)	166
Eco130I	CCWWGG	4 cut(s)	213, 697, 819, 1447
Eco24I	GRGCYC	2 cut(s)	168, 185
Eco47I	GGWCC	2 cut(s)	76, 1828
Eco53kI	GAGCTC	1 cut(s)	166
Eco57I	CTGAAG	3 cut(s)	89, 578, 1248
Eco81I	CCTNAGG	1 cut(s)	2319
Eco91I	GGTNACC	1 cut(s)	1370
EcoICRI	GAGCTC	1 cut(s)	166
EcoNI	CCTNNNNNAGG	1 cut(s)	1313
EcoO109I	RGGNCCY	1 cut(s)	1828
EcoO65I	GGTNACC	1 cut(s)	1370
EcoRI	GAATTC	1 cut(s)	1348
EcoRII	CCWGG	3 cut(s)	425, 2232, 2423
EcoT14I	CCWWGG	4 cut(s)	213, 697, 819, 1447
EcoT38I	GRGCYC	2 cut(s)	168, 185
ErhI	CCWWGG	4 cut(s)	213, 697, 819, 1447
Esp3I	CGTCTC	4 cut(s)	193, 233, 275, 2013
FaeI	CATG	9 cut(s)	526, 823, 926, 1008, 1142, 1271, 1356, 2054, 2090
FaqI	GGGAC	2 cut(s)	29, 2256
FatI	CATG	9 cut(s)	522, 819, 922, 1004, 1138, 1267, 1352, 2050, 2086
FauI	CCCGC	3 cut(s)	172, 660, 2252
FauNDI	CATATG	3 cut(s)	367, 571, 2146
FbaI	TGATCA	1 cut(s)	1417
FblI	GTMKAC	3 cut(s)	108, 593, 2211
FokI	GGATG	9 cut(s)	266, 461, 1109, 1216, 1596, 1688, 1763, 2348, 2404
FriOI	GRGCYC	2 cut(s)	168, 185
FspBI	CTAG	5 cut(s)	506, 1220, 2252, 2544, 2659
FspI	TGCGCA	1 cut(s)	1505
GlaI	GCGC	1 cut(s)	1505
GsaI	CCCAGC	2 cut(s)	448, 1989
GsuI	CTGGAG	2 cut(s)	321, 2312
HaeIII	GGCC	3 cut(s)	18, 236, 608
HapII	CCGG	7 cut(s)	25, 74, 813, 1376, 1905, 2534, 2650
HgaI	GACGC	3 cut(s)	292, 982, 2253
HhaI	GCGC	1 cut(s)	1506
Hin1I	GRCGYC	1 cut(s)	2628
Hin1II	CATG	9 cut(s)	526, 823, 926, 1008, 1142, 1271, 1356, 2054, 2090
Hin6I	GCGC	1 cut(s)	1504
HinP1I	GCGC	1 cut(s)	1504
HincII	GTYRAC	1 cut(s)	109
HindII	GTYRAC	1 cut(s)	109
HinfI	GANTC	7 cut(s)	529, 1057, 1109, 1754, 2195, 2208, 2314
HpaII	CCGG	7 cut(s)	25, 74, 813, 1376, 1905, 2534, 2650
HphI	GGTGA	5 cut(s)	392, 1021, 1106, 1337, 2463
Hpy166II	GTNNAC	7 cut(s)	12, 109, 594, 972, 1328, 1336, 2212
Hpy8I	GTNNAC	7 cut(s)	12, 109, 594, 972, 1328, 1336, 2212
Hpy99I	CGWCG	5 cut(s)	110, 131, 2529, 2630, 2633
HpyAV	CCTTC	7 cut(s)	226, 237, 317, 340, 2129, 2360, 2389
HpyCH4III	ACNGT	6 cut(s)	54, 380, 408, 565, 913, 2475
HpyCH4IV	ACGT	7 cut(s)	242, 633, 717, 2022, 2060, 2387, 2628
HpyF10VI	GCNNNNNNNGC	9 cut(s)	96, 441, 464, 982, 1099, 1886, 1895, 1972, 2150
HpyF3I	CTNAG	7 cut(s)	1059, 1146, 1567, 1694, 2204, 2228, 2319
HpySE526I	ACGT	7 cut(s)	242, 633, 717, 2022, 2060, 2387, 2628
Hsp92I	GRCGYC	1 cut(s)	2628
Hsp92II	CATG	9 cut(s)	526, 823, 926, 1008, 1142, 1271, 1356, 2054, 2090
HspAI	GCGC	1 cut(s)	1504
Ksp22I	TGATCA	1 cut(s)	1417
LmnI	GCTCC	4 cut(s)	4, 107, 188, 2407
Lsp1109I	GCAGC	9 cut(s)	874, 896, 1129, 1291, 1675, 1697, 1901, 1987, 2153
LweI	GCATC	7 cut(s)	412, 562, 1156, 1194, 1885, 1993, 2326
MaeI	CTAG	5 cut(s)	506, 1220, 2252, 2544, 2659
MaeII	ACGT	7 cut(s)	242, 633, 717, 2022, 2060, 2387, 2628
MaeIII	GTNAC	6 cut(s)	400, 838, 955, 1242, 1370, 2632
MfeI	CAATTG	2 cut(s)	1718, 2463
MflI	RGATCY	1 cut(s)	1319
MhlI	GDGCHC	4 cut(s)	168, 185, 375, 2412
MlyI	GAGTC	3 cut(s)	1051, 2217, 2308
MmeI	TCCRAC	3 cut(s)	543, 598, 1604
MroXI	GAANNNNTTC	2 cut(s)	350, 2199
MseI	TTAA	3 cut(s)	1089, 1923, 2496
MslI	CAYNNNNRTG	4 cut(s)	378, 937, 1124, 2001
MspA1I	CMGCKG	2 cut(s)	887, 1688
MspCI	CTTAAG	1 cut(s)	1088
MspI	CCGG	7 cut(s)	25, 74, 813, 1376, 1905, 2534, 2650
MspR9I	CCNGG	7 cut(s)	25, 427, 1376, 1905, 2234, 2425, 2534
MunI	CAATTG	2 cut(s)	1718, 2463
Mva1269I	GAATGC	2 cut(s)	2035, 2247
MvaI	CCWGG	3 cut(s)	427, 2234, 2425
MwoI	GCNNNNNNNGC	9 cut(s)	96, 441, 464, 982, 1099, 1886, 1895, 1972, 2150
NciI	CCSGG	4 cut(s)	25, 1376, 1905, 2534
NcoI	CCATGG	1 cut(s)	819
NdeI	CATATG	3 cut(s)	367, 571, 2146
NlaIII	CATG	9 cut(s)	526, 823, 926, 1008, 1142, 1271, 1356, 2054, 2090
NlaIV	GGNNCC	4 cut(s)	103, 184, 817, 1444
NmeAIII	GCCGAG	2 cut(s)	187, 262
NmuCI	GTSAC	2 cut(s)	1242, 2632
NsbI	TGCGCA	1 cut(s)	1505
NspI	RCATGY	2 cut(s)	526, 1271
NspV	TTCGAA	2 cut(s)	230, 246
OliI	CACNNNNGTG	2 cut(s)	378, 937
PagI	TCATGA	1 cut(s)	2050
PcsI	WCGNNNNNNNCGW	1 cut(s)	102
PctI	GAATGC	2 cut(s)	2035, 2247
PdmI	GAANNNNTTC	2 cut(s)	350, 2199
PfeI	GAWTC	4 cut(s)	529, 1109, 1754, 2195
Pfl23II	CGTACG	1 cut(s)	1494
PleI	GAGTC	3 cut(s)	1051, 2216, 2308
PpsI	GAGTC	3 cut(s)	1051, 2216, 2308
PpuMI	RGGWCCY	1 cut(s)	1828
Psp124BI	GAGCTC	1 cut(s)	168
Psp5II	RGGWCCY	1 cut(s)	1828
Psp6I	CCWGG	3 cut(s)	425, 2232, 2423
PspEI	GGTNACC	1 cut(s)	1370
PspFI	CCCAGC	2 cut(s)	444, 1985
PspGI	CCWGG	3 cut(s)	425, 2232, 2423
PspLI	CGTACG	1 cut(s)	1494
PspN4I	GGNNCC	4 cut(s)	103, 184, 817, 1444
PspPI	GGNCC	2 cut(s)	76, 1828
PspPPI	RGGWCCY	1 cut(s)	1828
PstI	CTGCAG	1 cut(s)	886
PsuI	RGATCY	1 cut(s)	1319
PvuII	CAGCTG	2 cut(s)	887, 1688
RsaI	GTAC	6 cut(s)	56, 150, 364, 743, 1496, 1902
RsaNI	GTAC	6 cut(s)	55, 149, 363, 742, 1495, 1901
RseI	CAYNNNNRTG	4 cut(s)	378, 937, 1124, 2001
SacI	GAGCTC	1 cut(s)	168
SalI	GTCGAC	1 cut(s)	107
SaqAI	TTAA	3 cut(s)	1089, 1923, 2496
Sau96I	GGNCC	2 cut(s)	76, 1828
SchI	GAGTC	3 cut(s)	1051, 2217, 2308
ScrFI	CCNGG	7 cut(s)	25, 427, 1376, 1905, 2234, 2425, 2534
SduI	GDGCHC	4 cut(s)	168, 185, 375, 2412
SfaNI	GCATC	7 cut(s)	412, 562, 1156, 1194, 1885, 1993, 2326
SfcI	CTRYAG	3 cut(s)	355, 882, 2212
SfuI	TTCGAA	2 cut(s)	230, 246
SinI	GGWCC	2 cut(s)	76, 1828
SmiMI	CAYNNNNRTG	4 cut(s)	378, 937, 1124, 2001
SmlI	CTYRAG	3 cut(s)	1088, 1310, 1435
SmoI	CTYRAG	3 cut(s)	1088, 1310, 1435
SpeI	ACTAGT	1 cut(s)	505
SsiI	CCGC	9 cut(s)	84, 99, 159, 179, 430, 667, 1440, 1956, 2245
SspI	AATATT	2 cut(s)	1161, 2284
SspMI	CTAG	5 cut(s)	506, 1220, 2252, 2544, 2659
SstI	GAGCTC	1 cut(s)	168
StyD4I	CCNGG	7 cut(s)	23, 425, 1374, 1903, 2232, 2423, 2532
StyI	CCWWGG	4 cut(s)	213, 697, 819, 1447
TaaI	ACNGT	6 cut(s)	54, 380, 408, 565, 913, 2475
TaiI	ACGT	7 cut(s)	245, 636, 720, 2025, 2063, 2390, 2631
TaqI	TCGA	6 cut(s)	108, 114, 120, 230, 246, 2527
TatI	WGTACW	2 cut(s)	362, 741
TauI	GCSGC	3 cut(s)	86, 102, 161
TfiI	GAWTC	4 cut(s)	529, 1109, 1754, 2195
Tru1I	TTAA	3 cut(s)	1089, 1923, 2496
Tru9I	TTAA	3 cut(s)	1089, 1923, 2496
TscAI	CASTG	3 cut(s)	944, 1084, 2295
TseFI	GTSAC	2 cut(s)	1242, 2632
TseI	GCWGC	9 cut(s)	884, 887, 1142, 1304, 1685, 1688, 1889, 1975, 2141
Tsp45I	GTSAC	2 cut(s)	1242, 2632
TspGWI	ACGGA	7 cut(s)	94, 160, 175, 216, 429, 486, 2651
TspRI	CASTG	3 cut(s)	944, 1084, 2295
Vha464I	CTTAAG	1 cut(s)	1088
VpaK11BI	GGWCC	2 cut(s)	76, 1828
XagI	CCTNNNNNAGG	1 cut(s)	1313
XceI	RCATGY	2 cut(s)	526, 1271
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2287
XmiI	GTMKAC	3 cut(s)	108, 593, 2211
XmnI	GAANNNNTTC	2 cut(s)	350, 2199
XspI	CTAG	5 cut(s)	506, 1220, 2252, 2544, 2659
ZraI	GACGTC	1 cut(s)	2629

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.