Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp03

Orthogroup ID

OG0000648

Physical Location & Seq

Genomic Coordinates Forward (+)

3194818 .. 3201205

Gene Structure 6388 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.3G044500.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2628 bp

ATGGAGCAGAAACAAAGCATAGAGCAATTCAAAGGCCGAGCTCGGCTACCAAACTTTGCAATCCCAAGGCGCTATGATCTTCATCTCAGGCTTGATCTCTCAGCATGCACGTACTCCGGCACCGTGCAGATTAACGTTAGCATCGTTGAAGAGACCAAGTTTCTTGTCTTGAATGCTCTTGAACTTGATGTTCATGAAGTTTGCTTCACCAACTCTCATGGACAACAGTACCGCCCAAGTGATGTTGTTTTGGATGGTGATGAAGAATTTCTTGTTTTGGTGTTTGATCAAGCACTTGGTGTTGGTGAAGGAGTTTTGGGAATTGGGTTTTCTGCGGTCCTTGATGCGCACTTGAAAGGCTTCTATAAATGCACTTACTTGGATGGAGGAGAGAAAAAGAATATGGCCGTCACTCAATTTGAACCTGTGGATGCAAGGCGATGCTTCCCATGTTGGGATGAACCTGCGCTCAAGGCCACCTTCAAGATTGCAGTAGATGTACCATCAGAGCTGACAGCTTTGTCCAATATGCCAATTATCAGTGAAAAGCTTGATGCAAATGTTAAGACTGTTTATTTTGAGGAATCTCCTATTATGTCAACTTATTTAGTAGCTGTTGTTGTTGGCCTATTTGAACATATTGAAGATACAACATCTGATGGGGTAAAGGTTCGTGCATATTGCCCTGTTGGGAAGAGTGACAAAGGAGAGTTTGCTTTAAATCTTGCTGTTAAGACGCTTGATCTTTTCTCCAAATACTTCTCAACGCCTTACTCACTTCCCAAACTTGATATGGTTGCGGTTCCTGAATTTTCTGGTGGGGCCATGGAGAATTATGGTTTGATCACATACCGTGAAAATGAAATGCTTTATGATCATTTGCATTCCACAACAGCAAGGAAGCAAAGAATGGCAATTGTTGTAGCACATGAAGTAGCACATCAGTGGTTCGGCAATCTGGTAACAATGGAATGGTGGACTGATTTATGGCTTAATGAGGGTTTTGCGACTTGGGTAAGTTACATGGCCACTGATATTTTATTTCCTGAGTGGAAAATATGGTCTCAATTTCTTCAACAAACTACTGGTGGCCTAGTCAAGGATGCATTGGAACAATCGCATCCAATTGAGGTGGAGATACACCAAGCTCGTTCAATTCTTGAAGTTTTTGATGATATCAGCTATAAAAAGGGATCTGCTGTTATTCGAATGCTGCAGAGTTATCTTGGGGATGACATATTCCAGAAATCGTTAAGTTCCTACATAAAAAGATTTTCTGGAAAAAATGCGAAGACAGAAGATTTATGGAGTGTTCTTTCGGAGGAATCTGGTGTCAAAGTCAGCGAAATGATGGATGCTTGGACAAAGAAAAAAGGATATCCTGTTATATCTGTAAAAGCCAAGGAGCATATTTTGGAATTTGAGCAGACACAATTCCTGTCATCCGGTTTGCAAGGTGATGGGAATTGGATTGTTCCAATAAATTTTTCACTTGCTTCGTACGACAGACACAAGAGTTTCCTTTTGGAAACAAAGTCCAGAGAAGTGGACATTTCAGATCTTGTTGATTCCTTTGATAATGAACAACTCTGGGTGAAGATTAATATCTACCAGAGTGGTTTCTATAGGGTCAATTATGAAGATAAGCTTGCAGCTCGACTTAGGAAGGCTATTGAGCATAATAGCTTGGAAGCAACCGACAAGTTTGGCATTCTGGATGATGCATATGCTCTCTGTGAAGCTTGTGAACAATCACTTTCCTCTTTGCTTTCCTTGATGGATGTCTACAGAAAAGAAGTTGATTATATTGTCTTAACAAATTTGATCAACGTTTGTTATAATGTCGTCAAAATCTCAAGTGAGGCCATCCCAGATTCAGCAAATGATTTGAAACAATTTTTCATCAATCTCCTTCTGTTTCCAGCGGAAAGACTAGGTTGGGATTCAATACCTGGAGAGGATCATTTCAGTGCACTTCTGAGAGCAGAAATCTTGCAGGCCTTGGTTATCTTTGGCCACGATCAAACTCAGAAAGAAGCATTAGACCGTTTTCAGACATTATTGAATGATAGAAACACTCCACTTCTTTCAGCTGACACAAAAGGGGCTGCATACATTGCCGTGATGAGGAATGCTAGCATCTCAAATAGGAAAGATTTTGAGTCTCTTTTAAATGTTTACAGAGAAGCCAATACAGTGCAAGAGAAGGAAAGGATTCTACGTTTTTTTGCATCTTCTCCGGACCCGGATACAGTTCTTGAGGTTCTGAACTTTTTCTTATCGGATGAGGTTCGAGATCAGGATATTATATATGGACTTATTGGTATAAGCTTAGAATGCCGTGAAATAGCATGGATATGGTTGAAGGAGAACTGGGACCTGATTTTGAGCAAATATGGTGCTGGACTGCTACTCACCCATTTTGTACGAGACATTGTGACACCGTTATGTAGCAATGAAAAGGCTGATGAGGTTGAAGAATTTTTCGCGAGCCGTGTGCATCCTGTGATTTCTATGACTTTGAAGCAAAGCATTGCGCAGGTCCGAATCAAGGCGAGGTGGGTTGAACACATAAGGCAACAACAATCTGTGCAAGAGCTAGTCAAAGAATTAGCAGGCAAGAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001666 GO:0003674 GO:0003824 GO:0004177 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006508 GO:0006518 GO:0006807 GO:0006950 GO:0008150 GO:0008152 GO:0008233 GO:0008235 GO:0008237 GO:0008238 GO:0008270 GO:0009056 GO:0009628 GO:0009987 GO:0016787 GO:0019538 GO:0033218 GO:0033554 GO:0034641 GO:0036293 GO:0036294 GO:0042221 GO:0042277 GO:0043167 GO:0043169 GO:0043170 GO:0043171 GO:0043603 GO:0044237 GO:0044238 GO:0044248 GO:0044424 GO:0044444 GO:0044464 GO:0046872 GO:0046914 GO:0050896 GO:0051716 GO:0070006 GO:0070011 GO:0070482 GO:0070887 GO:0071453 GO:0071456 GO:0071704 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ERAP1_C Peptidase_M1

Protein Analysis

876

Amino Acids

99.55

Weight (kDa)

5.07

Isoelectric Point (pI)

37.39

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000648)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G33090
fragaria_vesca	FvH4_2g31431 FvH4_2g31440 FvH4_6g34250 FvH4_6g34262 FvH4_6g34263
malus_domestica	MD08G1066400.v1.1 MD08G1066500.v1.1 MD08G1067400.v1.1 MD09G1070300.v1.1 MD09G1187200.v1.1 MD10G1090900.v1.1 MD15G1054400.v1.1 MD17G1171400.v1.1
prunus_persica	Prupe.1G407900_v2.0.a1 Prupe.1G408000_v2.0.a1 Prupe.1G408000_v2.0.a1 Prupe.1G408000_v2.0.a1 Prupe.1G457300_v2.0.a1 Prupe.3G044500_v2.0.a1 Prupe.3G044500_v2.0.a1
pyrus_communis	pycom08g05520 pycom08g05550 pycom08g05560 pycom08g05590 pycom09g10370 pycom09g10380 pycom10g07440 pycom10g07460 pycom15g05130 pycom15g05150 pycom17g16900
rosa_chinensis	RchiOBHm_Chr2g0144571 RchiOBHm_Chr2g0144611 RchiOBHm_Chr4g0390591 RchiOBHm_Chr6g0311371 RchiOBHm_Chr6g0311381
rosa_laevigata	RLG00000009010 RLG00000009289 RLG00000010411 RLG00000010412 RLG00000020090 RLG00000020092 RLG00000036974
rosa_multiflora	Rmu_co8212940.1_g000001 Rmu_sc0005789.1_g000001 Rmu_sc0008536.1_g000010 Rmu_sc0008536.1_g000011 Rmu_sc0009300.1_g000002
rosa_roxburghii	Rroxscaffold_1G00056400 Rroxscaffold_2G00084720 Rroxscaffold_2G00101200 Rroxscaffold_7G00157670 Rroxscaffold_7G00157680
rosa_rugosa	Rorug02G0387900 Rorug02G0388000 Rorug02G0388100 Rorug06G0388300 Rorug06G0388400
rosa_samantha	Rh2AG440000 Rh2AG440100 Rh2BG450000 Rh2BG450300 Rh2BG450500 Rh2CG427000 Rh2CG427200 Rh2DG459900 Rh2DG460300 Rh2DG460500 Rh6AG502600 Rh6AG502700 Rh6BG513300 Rh6CG519100 Rh6CG519200
rosa_wichuraiana	Rw2G036000 Rw6G043770 Rw6G043780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1839
AasI	GACNNNNNNGTC	1 cut(s)	520
Acc16I	TGCGCA	2 cut(s)	348, 2538
Acc36I	ACCTGC	2 cut(s)	472, 2530
AccB1I	GGYRCC	1 cut(s)	119
AccI	GTMKAC	1 cut(s)	1785
AccII	CGCG	1 cut(s)	2489
AccIII	TCCGGA	1 cut(s)	2239
AciI	CCGC	4 cut(s)	232, 335, 800, 1925
AclI	AACGTT	2 cut(s)	135, 1830
AclWI	GGATC	2 cut(s)	1201, 1968
AcoI	YGGCCR	3 cut(s)	405, 1026, 2014
AcsI	RAATTY	6 cut(s)	266, 809, 1418, 1483, 1819, 2480
AdeI	CACNNNGTG	1 cut(s)	299
AfaI	GTAC	5 cut(s)	113, 230, 501, 1502, 2427
AfiI	CCNNNNNNNGG	4 cut(s)	454, 1099, 2127, 2551
AjnI	CCWGG	1 cut(s)	1951
AjuI	GAANNNNNNNTTGG	2 cut(s)	1471, 1503
AleI	CACNNNNGTG	1 cut(s)	943
Alw21I	GWGCWC	2 cut(s)	43, 1975
Alw26I	GTCTC	4 cut(s)	146, 1068, 2169, 2424
Alw44I	GTGCAC	1 cut(s)	1971
AlwI	GGATC	2 cut(s)	1201, 1968
Aor13HI	TCCGGA	1 cut(s)	2239
ApaLI	GTGCAC	1 cut(s)	1971
ApeKI	GCWGC	3 cut(s)	1213, 1652, 2108
ApoI	RAATTY	6 cut(s)	266, 809, 1418, 1483, 1819, 2480
AseI	ATTAAT	1 cut(s)	1602
Asp700I	GAANNNNTTC	4 cut(s)	267, 359, 2214, 2273
AspLEI	GCGC	4 cut(s)	72, 349, 469, 2539
AspS9I	GGNCC	5 cut(s)	337, 822, 2242, 2377, 2542
AsuC2I	CCSGG	1 cut(s)	2246
AsuHPI	GGTGA	6 cut(s)	199, 269, 317, 1469, 1606, 2407
AsuII	TTCGAA	1 cut(s)	1207
AsuNHI	GCTAGC	1 cut(s)	2135
AvaII	GGWCC	4 cut(s)	337, 2242, 2377, 2542
BaeGI	GKGCMC	1 cut(s)	1975
BaeI	ACNNNNGTAYC	2 cut(s)	212, 245
BalI	TGGCCA	2 cut(s)	1028, 2016
BanI	GGYRCC	1 cut(s)	119
BanII	GRGCYC	1 cut(s)	43
BbsI	GAAGAC	1 cut(s)	1298
Bbv12I	GWGCWC	2 cut(s)	43, 1975
BbvI	GCAGC	3 cut(s)	1200, 1664, 2095
BccI	CCATC	8 cut(s)	248, 377, 511, 653, 1345, 1454, 1771, 1874
BceAI	ACGGC	4 cut(s)	392, 2105, 2325, 2478
BcgI	CGANNNNNNTGC	2 cut(s)	2479, 2513
BciT130I	CCWGG	1 cut(s)	1953
BciVI	GTATCC	1 cut(s)	2242
BclI	TGATCA	4 cut(s)	286, 843, 874, 1824
BcnI	CCSGG	1 cut(s)	2246
BcoDI	GTCTC	4 cut(s)	146, 1068, 2169, 2424
BfaI	CTAG	4 cut(s)	1094, 1934, 2136, 2600
BfmI	CTRYAG	3 cut(s)	1214, 1624, 1786
BfoI	RGCGCY	1 cut(s)	73
BfuAI	ACCTGC	2 cut(s)	472, 2530
BfuI	GTATCC	1 cut(s)	2242
BglII	AGATCT	1 cut(s)	1558
BisI	GCNGC	3 cut(s)	1214, 1653, 2109
BlsI	GCNGC	3 cut(s)	1215, 1654, 2110
Bme1390I	CCNGG	2 cut(s)	1953, 2246
Bme18I	GGWCC	4 cut(s)	337, 2242, 2377, 2542
BmgT120I	GGNCC	5 cut(s)	337, 822, 2242, 2377, 2542
BmiI	GGNNCC	5 cut(s)	121, 804, 823, 2244, 2378
BmrFI	CCNGG	2 cut(s)	1953, 2246
BmrI	ACTGGG	1 cut(s)	2383
BmtI	GCTAGC	1 cut(s)	2139
BmuI	ACTGGG	1 cut(s)	2383
BpiI	GAAGAC	1 cut(s)	1298
BpmI	CTGGAG	1 cut(s)	1974
Bpu14I	TTCGAA	1 cut(s)	1207
BpuEI	CTTGAG	3 cut(s)	455, 1840, 2279
BpuMI	CCSGG	1 cut(s)	2246
BsaAI	YACGTR	1 cut(s)	111
BsaBI	GATNNNNATC	2 cut(s)	81, 1604
BsaI	GGTCTC	2 cut(s)	146, 1068
BsaJI	CCNNGG	4 cut(s)	65, 825, 1401, 2001
BsaWI	WCCGGW	2 cut(s)	1445, 2239
Bsc4I	CCNNNNNNNGG	4 cut(s)	454, 1099, 2127, 2551
Bse1I	ACTGG	2 cut(s)	1090, 2378
Bse3DI	GCAATG	3 cut(s)	2115, 2461, 2532
Bse8I	GATNNNNATC	2 cut(s)	81, 1604
BseAI	TCCGGA	1 cut(s)	2239
BseBI	CCWGG	1 cut(s)	1953
BseDI	CCNNGG	4 cut(s)	65, 825, 1401, 2001
BseJI	GATNNNNATC	2 cut(s)	81, 1604
BseLI	CCNNNNNNNGG	4 cut(s)	454, 1099, 2127, 2551
BseMI	GCAATG	3 cut(s)	2115, 2461, 2532
BseMII	CTCAG	5 cut(s)	100, 114, 1038, 1970, 2042
BseNI	ACTGG	2 cut(s)	1090, 2378
BseRI	GAGGAG	1 cut(s)	402
BseSI	GKGCMC	1 cut(s)	1975
BseXI	GCAGC	3 cut(s)	1200, 1664, 2095
BsgI	GTGCAG	1 cut(s)	146
Bsh1236I	CGCG	1 cut(s)	2489
BshNI	GGYRCC	1 cut(s)	119
BsiHKAI	GWGCWC	2 cut(s)	43, 1975
BsiSI	CCGG	4 cut(s)	117, 1446, 2240, 2246
BsiWI	CGTACG	1 cut(s)	1500
BslFI	GGGAC	1 cut(s)	2390
BslI	CCNNNNNNNGG	4 cut(s)	454, 1099, 2127, 2551
BsmAI	GTCTC	4 cut(s)	146, 1068, 2169, 2424
BsmFI	GGGAC	1 cut(s)	2390
BsmI	GAATGC	6 cut(s)	178, 883, 1215, 1710, 2137, 2342
Bso31I	GGTCTC	2 cut(s)	146, 1068
Bsp119I	TTCGAA	1 cut(s)	1207
Bsp1286I	GDGCHC	2 cut(s)	43, 1975
Bsp13I	TCCGGA	1 cut(s)	2239
Bsp19I	CCATGG	1 cut(s)	825
Bsp68I	TCGCGA	1 cut(s)	2489
BspACI	CCGC	4 cut(s)	232, 335, 800, 1925
BspCNI	CTCAG	5 cut(s)	99, 113, 1039, 1971, 2041
BspEI	TCCGGA	1 cut(s)	2239
BspFNI	CGCG	1 cut(s)	2489
BspHI	TCATGA	1 cut(s)	193
BspLI	GGNNCC	5 cut(s)	121, 804, 823, 2244, 2378
BspMAI	CTGCAG	1 cut(s)	1218
BspMI	ACCTGC	2 cut(s)	472, 2530
BspOI	GCTAGC	1 cut(s)	2139
BspPI	GGATC	2 cut(s)	1201, 1968
BspT104I	TTCGAA	1 cut(s)	1207
BspT107I	GGYRCC	1 cut(s)	119
BspTNI	GGTCTC	2 cut(s)	146, 1068
BsrDI	GCAATG	3 cut(s)	2115, 2461, 2532
BsrI	ACTGG	2 cut(s)	1090, 2378
BssECI	CCNNGG	4 cut(s)	65, 825, 1401, 2001
BssT1I	CCWWGG	4 cut(s)	65, 825, 1401, 2001
Bst2UI	CCWGG	1 cut(s)	1953
Bst4CI	ACNGT	8 cut(s)	124, 228, 571, 854, 2048, 2197, 2254, 2445
Bst6I	CTCTTC	2 cut(s)	144, 689
BstAPI	GCANNNNNTGC	1 cut(s)	2117
BstBAI	YACGTR	1 cut(s)	111
BstBI	TTCGAA	1 cut(s)	1207
BstC8I	GCNNGC	6 cut(s)	106, 1650, 1998, 2137, 2491, 2617
BstDEI	CTNAG	7 cut(s)	86, 100, 1047, 1661, 1979, 2028, 2332
BstDSI	CCRYGG	1 cut(s)	825
BstENI	CCTNNNNNAGG	1 cut(s)	1097
BstFNI	CGCG	1 cut(s)	2489
BstH2I	RGCGCY	1 cut(s)	73
BstHHI	GCGC	4 cut(s)	72, 349, 469, 2539
BstMAI	GTCTC	4 cut(s)	146, 1068, 2169, 2424
BstMWI	GCNNNNNNNGC	3 cut(s)	473, 2117, 2337
BstNI	CCWGG	1 cut(s)	1953
BstNSI	RCATGY	1 cut(s)	108
BstSCI	CCNGG	2 cut(s)	1951, 2244
BstSFI	CTRYAG	3 cut(s)	1214, 1624, 1786
BstSLI	GKGCMC	1 cut(s)	1975
BstUI	CGCG	1 cut(s)	2489
BstV1I	GCAGC	3 cut(s)	1200, 1664, 2095
BstV2I	GAAGAC	1 cut(s)	1298
BstX2I	RGATCY	2 cut(s)	1193, 1558
BstXI	CCANNNNNNTGG	1 cut(s)	1546
BstYI	RGATCY	2 cut(s)	1193, 1558
BsuI	GTATCC	1 cut(s)	2242
BtgI	CCRYGG	1 cut(s)	825
BtgZI	GCGATG	1 cut(s)	454
BtsIMutI	CAGTG	5 cut(s)	547, 950, 1029, 1975, 2202
BtuMI	TCGCGA	1 cut(s)	2489
BveI	ACCTGC	2 cut(s)	472, 2530
Cac8I	GCNNGC	6 cut(s)	106, 1650, 1998, 2137, 2491, 2617
CciI	TCATGA	1 cut(s)	193
CfoI	GCGC	4 cut(s)	72, 349, 469, 2539
Cfr13I	GGNCC	5 cut(s)	337, 822, 2242, 2377, 2542
CseI	GACGC	1 cut(s)	745
Csp6I	GTAC	5 cut(s)	112, 229, 500, 1501, 2426
CspCI	CAANNNNNGTGG	2 cut(s)	1113, 1148
CviAII	CATG	8 cut(s)	105, 194, 218, 450, 826, 929, 1024, 2352
CviQI	GTAC	5 cut(s)	112, 229, 500, 1501, 2426
DdeI	CTNAG	7 cut(s)	86, 100, 1047, 1661, 1979, 2028, 2332
DraI	TTTAAA	2 cut(s)	720, 2172
DraIII	CACNNNGTG	1 cut(s)	299
DrdI	GACNNNNNNGTC	1 cut(s)	520
DseDI	GACNNNNNNGTC	1 cut(s)	520
EaeI	YGGCCR	3 cut(s)	405, 1026, 2014
Eam1104I	CTCTTC	2 cut(s)	144, 689
EarI	CTCTTC	2 cut(s)	144, 689
Ecl136II	GAGCTC	1 cut(s)	41
Eco130I	CCWWGG	4 cut(s)	65, 825, 1401, 2001
Eco147I	AGGCCT	1 cut(s)	2000
Eco24I	GRGCYC	1 cut(s)	43
Eco31I	GGTCTC	2 cut(s)	146, 1068
Eco32I	GATATC	2 cut(s)	1177, 1379
Eco47I	GGWCC	4 cut(s)	337, 2242, 2377, 2542
Eco53kI	GAGCTC	1 cut(s)	41
EcoICRI	GAGCTC	1 cut(s)	41
EcoNI	CCTNNNNNAGG	1 cut(s)	1097
EcoO109I	RGGNCCY	1 cut(s)	2377
EcoRII	CCWGG	1 cut(s)	1951
EcoRV	GATATC	2 cut(s)	1177, 1379
EcoT14I	CCWWGG	4 cut(s)	65, 825, 1401, 2001
EcoT22I	ATGCAT	2 cut(s)	1108, 1726
EcoT38I	GRGCYC	1 cut(s)	43
ErhI	CCWWGG	4 cut(s)	65, 825, 1401, 2001
FaeI	CATG	8 cut(s)	108, 197, 221, 453, 829, 932, 1027, 2355
FalI	AAGNNNNNCTT	6 cut(s)	255, 287, 464, 496, 1632, 1664
FaqI	GGGAC	1 cut(s)	2390
FatI	CATG	8 cut(s)	104, 193, 217, 449, 825, 928, 1023, 2351
FauNDI	CATATG	1 cut(s)	1726
FbaI	TGATCA	4 cut(s)	286, 843, 874, 1824
FblI	GTMKAC	1 cut(s)	1785
Fnu4HI	GCNGC	3 cut(s)	1214, 1653, 2109
FriOI	GRGCYC	1 cut(s)	43
Fsp4HI	GCNGC	3 cut(s)	1214, 1653, 2109
FspAI	RTGCGCAY	1 cut(s)	348
FspBI	CTAG	4 cut(s)	1094, 1934, 2136, 2600
FspI	TGCGCA	2 cut(s)	348, 2538
GlaI	GCGC	4 cut(s)	71, 348, 468, 2538
GluI	GCNGC	3 cut(s)	1214, 1653, 2109
GsuI	CTGGAG	1 cut(s)	1974
HaeII	RGCGCY	1 cut(s)	73
HapII	CCGG	4 cut(s)	117, 1446, 2240, 2246
HgaI	GACGC	1 cut(s)	745
HhaI	GCGC	4 cut(s)	72, 349, 469, 2539
Hin1II	CATG	8 cut(s)	108, 197, 221, 453, 829, 932, 1027, 2355
Hin6I	GCGC	4 cut(s)	70, 347, 467, 2537
HinP1I	GCGC	4 cut(s)	70, 347, 467, 2537
HincII	GTYRAC	1 cut(s)	600
HindII	GTYRAC	1 cut(s)	600
HindIII	AAGCTT	4 cut(s)	548, 1646, 1740, 2329
HinfI	GANTC	8 cut(s)	584, 1325, 1568, 1874, 1943, 2162, 2215, 2547
HpaII	CCGG	4 cut(s)	117, 1446, 2240, 2246
HphI	GGTGA	6 cut(s)	199, 269, 317, 1469, 1606, 2407
Hpy166II	GTNNAC	7 cut(s)	600, 978, 1549, 1748, 1786, 1973, 2179
Hpy8I	GTNNAC	7 cut(s)	600, 978, 1549, 1748, 1786, 1973, 2179
HpyAV	CCTTC	6 cut(s)	302, 490, 1660, 1922, 2200, 2359
HpyCH4III	ACNGT	8 cut(s)	124, 228, 571, 854, 2048, 2197, 2254, 2445
HpyCH4IV	ACGT	4 cut(s)	110, 135, 1830, 2221
HpyF10VI	GCNNNNNNNGC	3 cut(s)	473, 2117, 2337
HpyF3I	CTNAG	7 cut(s)	86, 100, 1047, 1661, 1979, 2028, 2332
HpySE526I	ACGT	4 cut(s)	110, 135, 1830, 2221
Hsp92II	CATG	8 cut(s)	108, 197, 221, 453, 829, 932, 1027, 2355
HspAI	GCGC	4 cut(s)	70, 347, 467, 2537
Kpn2I	TCCGGA	1 cut(s)	2239
Ksp22I	TGATCA	4 cut(s)	286, 843, 874, 1824
LmnI	GCTCC	2 cut(s)	4, 1405
Lsp1109I	GCAGC	3 cut(s)	1200, 1664, 2095
MaeI	CTAG	4 cut(s)	1094, 1934, 2136, 2600
MaeII	ACGT	4 cut(s)	110, 135, 1830, 2221
MaeIII	GTNAC	5 cut(s)	409, 698, 961, 1019, 2437
MfeI	CAATTG	2 cut(s)	915, 1125
MflI	RGATCY	2 cut(s)	1193, 1558
MhlI	GDGCHC	2 cut(s)	43, 1975
MlsI	TGGCCA	2 cut(s)	1028, 2016
MluNI	TGGCCA	2 cut(s)	1028, 2016
MlyI	GAGTC	1 cut(s)	2171
Mox20I	TGGCCA	2 cut(s)	1028, 2016
Mph1103I	ATGCAT	2 cut(s)	1108, 1726
MroI	TCCGGA	1 cut(s)	2239
MroXI	GAANNNNTTC	4 cut(s)	267, 359, 2214, 2273
MscI	TGGCCA	2 cut(s)	1028, 2016
MseI	TTAA	9 cut(s)	132, 564, 719, 732, 993, 1253, 1602, 1814, 2171
MslI	CAYNNNNRTG	5 cut(s)	943, 1968, 2120, 2356, 2446
Msp20I	TGGCCA	2 cut(s)	1028, 2016
MspA1I	CMGCKG	2 cut(s)	1925, 2093
MspI	CCGG	4 cut(s)	117, 1446, 2240, 2246
MspR9I	CCNGG	2 cut(s)	1953, 2246
MunI	CAATTG	2 cut(s)	915, 1125
Mva1269I	GAATGC	6 cut(s)	178, 883, 1215, 1710, 2137, 2342
MvaI	CCWGG	1 cut(s)	1953
MvnI	CGCG	1 cut(s)	2489
MwoI	GCNNNNNNNGC	3 cut(s)	473, 2117, 2337
NciI	CCSGG	1 cut(s)	2246
NcoI	CCATGG	1 cut(s)	825
NdeI	CATATG	1 cut(s)	1726
NheI	GCTAGC	1 cut(s)	2135
NlaIII	CATG	8 cut(s)	108, 197, 221, 453, 829, 932, 1027, 2355
NlaIV	GGNNCC	5 cut(s)	121, 804, 823, 2244, 2378
NmeAIII	GCCGAG	2 cut(s)	22, 62
NmuCI	GTSAC	3 cut(s)	409, 698, 2437
NruI	TCGCGA	1 cut(s)	2489
NsbI	TGCGCA	2 cut(s)	348, 2538
NsiI	ATGCAT	2 cut(s)	1108, 1726
NspI	RCATGY	1 cut(s)	108
NspV	TTCGAA	1 cut(s)	1207
OliI	CACNNNNGTG	1 cut(s)	943
PaeI	GCATGC	1 cut(s)	108
PagI	TCATGA	1 cut(s)	193
PceI	AGGCCT	1 cut(s)	2000
PcsI	WCGNNNNNNNCGW	1 cut(s)	141
PctI	GAATGC	6 cut(s)	178, 883, 1215, 1710, 2137, 2342
PdmI	GAANNNNTTC	4 cut(s)	267, 359, 2214, 2273
PfeI	GAWTC	7 cut(s)	584, 1325, 1568, 1874, 1943, 2215, 2547
Pfl23II	CGTACG	1 cut(s)	1500
PkrI	GCNGC	3 cut(s)	1215, 1654, 2110
PleI	GAGTC	1 cut(s)	2170
PpsI	GAGTC	1 cut(s)	2170
Ppu21I	YACGTR	1 cut(s)	111
PpuMI	RGGWCCY	1 cut(s)	2377
PshBI	ATTAAT	1 cut(s)	1602
PsiI	TTATAA	1 cut(s)	1839
Psp124BI	GAGCTC	1 cut(s)	43
Psp1406I	AACGTT	2 cut(s)	135, 1830
Psp5II	RGGWCCY	1 cut(s)	2377
Psp6I	CCWGG	1 cut(s)	1951
PspGI	CCWGG	1 cut(s)	1951
PspLI	CGTACG	1 cut(s)	1500
PspN4I	GGNNCC	5 cut(s)	121, 804, 823, 2244, 2378
PspPI	GGNCC	5 cut(s)	337, 822, 2242, 2377, 2542
PspPPI	RGGWCCY	1 cut(s)	2377
PstI	CTGCAG	1 cut(s)	1218
PsuI	RGATCY	2 cut(s)	1193, 1558
PvuII	CAGCTG	1 cut(s)	2093
RruI	TCGCGA	1 cut(s)	2489
RsaI	GTAC	5 cut(s)	113, 230, 501, 1502, 2427
RsaNI	GTAC	5 cut(s)	112, 229, 500, 1501, 2426
RseI	CAYNNNNRTG	5 cut(s)	943, 1968, 2120, 2356, 2446
SacI	GAGCTC	1 cut(s)	43
SaqAI	TTAA	9 cut(s)	132, 564, 719, 732, 993, 1253, 1602, 1814, 2171
SatI	GCNGC	3 cut(s)	1214, 1653, 2109
Sau96I	GGNCC	5 cut(s)	337, 822, 2242, 2377, 2542
SchI	GAGTC	1 cut(s)	2171
ScrFI	CCNGG	2 cut(s)	1953, 2246
SduI	GDGCHC	2 cut(s)	43, 1975
SfcI	CTRYAG	3 cut(s)	1214, 1624, 1786
SfuI	TTCGAA	1 cut(s)	1207
SinI	GGWCC	4 cut(s)	337, 2242, 2377, 2542
SmiMI	CAYNNNNRTG	5 cut(s)	943, 1968, 2120, 2356, 2446
SmlI	CTYRAG	3 cut(s)	470, 1855, 2258
SmoI	CTYRAG	3 cut(s)	470, 1855, 2258
SphI	GCATGC	1 cut(s)	108
SseBI	AGGCCT	1 cut(s)	2000
SsiI	CCGC	4 cut(s)	232, 335, 800, 1925
SspMI	CTAG	4 cut(s)	1094, 1934, 2136, 2600
SstI	GAGCTC	1 cut(s)	43
StuI	AGGCCT	1 cut(s)	2000
StyD4I	CCNGG	2 cut(s)	1951, 2244
StyI	CCWWGG	4 cut(s)	65, 825, 1401, 2001
TaaI	ACNGT	8 cut(s)	124, 228, 571, 854, 2048, 2197, 2254, 2445
TaiI	ACGT	4 cut(s)	113, 138, 1833, 2224
TaqI	TCGA	3 cut(s)	1207, 1657, 2293
TfiI	GAWTC	7 cut(s)	584, 1325, 1568, 1874, 1943, 2215, 2547
Tru1I	TTAA	9 cut(s)	132, 564, 719, 732, 993, 1253, 1602, 1814, 2171
Tru9I	TTAA	9 cut(s)	132, 564, 719, 732, 993, 1253, 1602, 1814, 2171
TscAI	CASTG	5 cut(s)	547, 950, 1036, 1975, 2202
TseFI	GTSAC	3 cut(s)	409, 698, 2437
TseI	GCWGC	3 cut(s)	1213, 1652, 2108
Tsp45I	GTSAC	3 cut(s)	409, 698, 2437
TspRI	CASTG	5 cut(s)	547, 950, 1036, 1975, 2202
VneI	GTGCAC	1 cut(s)	1971
VpaK11BI	GGWCC	4 cut(s)	337, 2242, 2377, 2542
VspI	ATTAAT	1 cut(s)	1602
XagI	CCTNNNNNAGG	1 cut(s)	1097
XapI	RAATTY	6 cut(s)	266, 809, 1418, 1483, 1819, 2480
XceI	RCATGY	1 cut(s)	108
XcmI	CCANNNNNNNNNTGG	1 cut(s)	790
XmiI	GTMKAC	1 cut(s)	1785
XmnI	GAANNNNTTC	4 cut(s)	267, 359, 2214, 2273
XspI	CTAG	4 cut(s)	1094, 1934, 2136, 2600
Zsp2I	ATGCAT	2 cut(s)	1108, 1726

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.