Rorug02G0388100

Aminopeptidase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Reverse (-)
49505331 .. 49507537
2207 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0388100.1

Sequence Viewer

Length: 894 bp
ATGGCCACCGCAGCATTGCTCCGTTCACTATGCTGTCGTGATGTTGCAACCGCCTCCCTCTCTGCCTACCGCTCTTTGAATAGCACTGTCAAGTCCTCGCTTCAGGGTCACCACTGGGTAAGCTTGGCAAGACCTTTTAGTTGCATACCTGTTTGGAATGATGTGAAGGGGATTGACTCGGTCACCACCAGCTCATCTGTGGCTGAGATGGAGAAAAAGCTGGGGTTTGAAATCAGAAAACATGCGGAGATGGTCATATGGAACATTCGGATGATAAAGAGGTACAAAACCAAGATTCCCGGCGAGATTGTTAAAAGAATTGAGGATGAGGTTTTAGATTTGAGAAAAGCAAGTAGAGGGAAGAGTGTTTTTAGGGAACCAAAATCCAAGATGGACGAGAACTTGGCATGTCGAAATGACTCTGTTGTATGGGGATCACATGGGGATCAGTTTAGTGATGATGAGCAGGGTGGCGGGTACTTTGGAGGTGAAGCTTCTTGGGATCAGTCTGGCTCAGACATCCCCATTATGAACAAGATCTTAGAGGAGCACAGAGACAAGATTCCAAGTGACTTGGCTAGAGAAGTTGAGGCTGCAATTATAGATTTGCAGAAGGCAACGGAAGGGGGTAATGCTGAAGAGATTAATGCGAAGCTTGACGATGCCAGCAAAGCTGTCTCAAAGATTGGGGAGCACATGTACCGGGGCCCTGATTCTGATGATGACTCTGTTGGTGACCATGATCCCGCTGGTTGTCTCAATGATGGGGAATACCATGAAGGCGAGGCTTCTAAAAATGATCCTGAAGCTTTTGGCGGTGGCTCTAACACGCATGGTGGCGGCTTTGATAATTTTGACAATCACTATGACTCGTGTGGTGGTGGTGATTACTGA

Protein Analysis

297

Amino Acids

32.48

Weight (kDa)

5.0

Isoelectric Point (pI)

44.73

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000648)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 72
AciI CCGC 8 cut(s) 9, 51, 70, 245, 474, 747, 816, 840
AclWI GGATC 5 cut(s) 442, 453, 510, 737, 794
AcoI YGGCCR 1 cut(s) 3
AcuI CTGAAG 3 cut(s) 86, 657, 825
AfaI GTAC 3 cut(s) 284, 479, 701
AflIII ACRYGT 1 cut(s) 696
AgsI TTSAA 2 cut(s) 79, 230
AluBI AGCT 7 cut(s) 123, 192, 220, 494, 655, 674, 809
AluI AGCT 7 cut(s) 123, 192, 220, 494, 655, 674, 809
Alw21I GWGCWC 2 cut(s) 552, 696
Alw26I GTCTC 3 cut(s) 549, 682, 761
AlwI GGATC 5 cut(s) 442, 453, 510, 737, 794
AoxI GGCC 2 cut(s) 3, 706
ApaI GGGCCC 1 cut(s) 710
ApeKI GCWGC 2 cut(s) 11, 593
AseI ATTAAT 1 cut(s) 645
AspS9I GGNCC 2 cut(s) 706, 707
AsuC2I CCSGG 2 cut(s) 300, 704
AsuHPI GGTGA 4 cut(s) 101, 175, 500, 746
BaeGI GKGCMC 1 cut(s) 710
BalI TGGCCA 1 cut(s) 5
BanII GRGCYC 1 cut(s) 710
BauI CACGAG 1 cut(s) 871
Bbv12I GWGCWC 2 cut(s) 552, 696
BbvI GCAGC 2 cut(s) 23, 580
BccI CCATC 4 cut(s) 202, 244, 385, 758
BcnI CCSGG 2 cut(s) 300, 704
BcoDI GTCTC 3 cut(s) 549, 682, 761
BfaI CTAG 1 cut(s) 579
BglII AGATCT 1 cut(s) 537
BisI GCNGC 3 cut(s) 12, 594, 841
BlsI GCNGC 3 cut(s) 13, 595, 842
Bme1390I CCNGG 2 cut(s) 300, 704
BmgT120I GGNCC 2 cut(s) 706, 707
BmiI GGNNCC 3 cut(s) 378, 707, 708
BmrFI CCNGG 2 cut(s) 300, 704
BmrI ACTGGG 1 cut(s) 124
BmsI GCATC 1 cut(s) 652
BmuI ACTGGG 1 cut(s) 124
BpuMI CCSGG 2 cut(s) 300, 704
BsaJI CCNNGG 1 cut(s) 703
BsaXI ACNNNNNCTCC 2 cut(s) 683, 713
Bse1I ACTGG 1 cut(s) 119
Bse3DI GCAATG 1 cut(s) 14
BseDI CCNNGG 1 cut(s) 703
BseGI GGATG 3 cut(s) 276, 331, 519
BseMI GCAATG 1 cut(s) 14
BseMII CTCAG 2 cut(s) 195, 528
BseNI ACTGG 1 cut(s) 119
BseRI GAGGAG 1 cut(s) 560
BseSI GKGCMC 1 cut(s) 710
BseXI GCAGC 2 cut(s) 23, 580
BseYI CCCAGC 1 cut(s) 220
BshFI GGCC 2 cut(s) 5, 708
BsiHKAI GWGCWC 2 cut(s) 552, 696
BsiSI CCGG 2 cut(s) 300, 703
BsmAI GTCTC 3 cut(s) 549, 682, 761
BsnI GGCC 2 cut(s) 5, 708
Bsp120I GGGCCC 1 cut(s) 706
Bsp1286I GDGCHC 3 cut(s) 552, 696, 710
Bsp143I GATC 6 cut(s) 434, 445, 502, 537, 742, 799
BspACI CCGC 8 cut(s) 9, 51, 70, 245, 474, 747, 816, 840
BspANI GGCC 2 cut(s) 5, 708
BspCNI CTCAG 2 cut(s) 196, 527
BspLI GGNNCC 3 cut(s) 378, 707, 708
BspPI GGATC 5 cut(s) 442, 453, 510, 737, 794
BsrBI CCGCTC 1 cut(s) 72
BsrDI GCAATG 1 cut(s) 14
BsrI ACTGG 1 cut(s) 119
BssECI CCNNGG 1 cut(s) 703
BssMI GATC 6 cut(s) 434, 445, 502, 537, 742, 799
BssSI CACGAG 1 cut(s) 871
Bst2BI CACGAG 1 cut(s) 871
Bst4CI ACNGT 1 cut(s) 88
Bst6I CTCTTC 2 cut(s) 356, 633
BstC8I GCNNGC 1 cut(s) 667
BstDEI CTNAG 3 cut(s) 204, 514, 541
BstEII GGTNACC 3 cut(s) 107, 181, 734
BstF5I GGATG 3 cut(s) 276, 331, 519
BstKTI GATC 6 cut(s) 437, 448, 505, 540, 745, 802
BstMAI GTCTC 3 cut(s) 549, 682, 761
BstMBI GATC 6 cut(s) 434, 445, 502, 537, 742, 799
BstMWI GCNNNNNNNGC 2 cut(s) 11, 671
BstNSI RCATGY 3 cut(s) 245, 411, 700
BstPI GGTNACC 3 cut(s) 107, 181, 734
BstSCI CCNGG 2 cut(s) 298, 702
BstSLI GKGCMC 1 cut(s) 710
BstV1I GCAGC 2 cut(s) 23, 580
BstX2I RGATCY 1 cut(s) 537
BstYI RGATCY 1 cut(s) 537
BsuRI GGCC 2 cut(s) 5, 708
BtsCI GGATG 3 cut(s) 276, 331, 519
BtsIMutI CAGTG 2 cut(s) 84, 112
Cac8I GCNNGC 1 cut(s) 667
Cfr13I GGNCC 2 cut(s) 706, 707
Csp6I GTAC 3 cut(s) 283, 478, 700
CviAII CATG 7 cut(s) 242, 408, 440, 697, 740, 776, 833
CviQI GTAC 3 cut(s) 283, 478, 700
DdeI CTNAG 3 cut(s) 204, 514, 541
DpnI GATC 6 cut(s) 436, 447, 504, 539, 744, 801
DpnII GATC 6 cut(s) 434, 445, 502, 537, 742, 799
EaeI YGGCCR 1 cut(s) 3
Eam1104I CTCTTC 2 cut(s) 356, 633
EarI CTCTTC 2 cut(s) 356, 633
Eco24I GRGCYC 1 cut(s) 710
Eco57I CTGAAG 3 cut(s) 86, 657, 825
Eco91I GGTNACC 3 cut(s) 107, 181, 734
EcoO109I RGGNCCY 2 cut(s) 706, 707
EcoO65I GGTNACC 3 cut(s) 107, 181, 734
EcoT38I GRGCYC 1 cut(s) 710
FaeI CATG 7 cut(s) 245, 411, 443, 700, 743, 779, 836
FatI CATG 7 cut(s) 241, 407, 439, 696, 739, 775, 832
FauI CCCGC 2 cut(s) 467, 754
FauNDI CATATG 1 cut(s) 257
Fnu4HI GCNGC 3 cut(s) 12, 594, 841
FokI GGATG 3 cut(s) 283, 338, 506
FriOI GRGCYC 1 cut(s) 710
Fsp4HI GCNGC 3 cut(s) 12, 594, 841
FspBI CTAG 1 cut(s) 579
GluI GCNGC 3 cut(s) 12, 594, 841
GsaI CCCAGC 1 cut(s) 224
HaeIII GGCC 2 cut(s) 5, 708
HapII CCGG 2 cut(s) 300, 703
Hin1II CATG 7 cut(s) 245, 411, 443, 700, 743, 779, 836
HindIII AAGCTT 4 cut(s) 121, 492, 653, 807
HinfI GANTC 7 cut(s) 176, 295, 419, 562, 713, 725, 869
HpaII CCGG 2 cut(s) 300, 703
HphI GGTGA 4 cut(s) 101, 175, 500, 746
Hpy166II GTNNAC 1 cut(s) 26
Hpy188I TCNGA 4 cut(s) 236, 270, 517, 718
Hpy188III TCNNGA 2 cut(s) 38, 803
Hpy8I GTNNAC 1 cut(s) 26
HpyAV CCTTC 4 cut(s) 160, 607, 617, 773
HpyCH4III ACNGT 1 cut(s) 88
HpyCH4V TGCA 4 cut(s) 47, 144, 596, 610
HpyF10VI GCNNNNNNNGC 2 cut(s) 11, 671
HpyF3I CTNAG 3 cut(s) 204, 514, 541
Hsp92II CATG 7 cut(s) 245, 411, 443, 700, 743, 779, 836
Kzo9I GATC 6 cut(s) 434, 445, 502, 537, 742, 799
LmnI GCTCC 3 cut(s) 24, 547, 691
Lsp1109I GCAGC 2 cut(s) 23, 580
LweI GCATC 1 cut(s) 652
MaeI CTAG 1 cut(s) 579
MaeIII GTNAC 4 cut(s) 107, 181, 569, 734
MalI GATC 6 cut(s) 436, 447, 504, 539, 744, 801
MbiI CCGCTC 1 cut(s) 72
MboI GATC 6 cut(s) 434, 445, 502, 537, 742, 799
MboII GAAGA 2 cut(s) 373, 650
MflI RGATCY 1 cut(s) 537
MhlI GDGCHC 3 cut(s) 552, 696, 710
MlsI TGGCCA 1 cut(s) 5
MluCI AATT 3 cut(s) 318, 597, 850
MluNI TGGCCA 1 cut(s) 5
MlyI GAGTC 4 cut(s) 170, 413, 719, 863
Mox20I TGGCCA 1 cut(s) 5
MscI TGGCCA 1 cut(s) 5
MseI TTAA 2 cut(s) 312, 645
MslI CAYNNNNRTG 1 cut(s) 269
Msp20I TGGCCA 1 cut(s) 5
MspA1I CMGCKG 1 cut(s) 749
MspI CCGG 2 cut(s) 300, 703
MspR9I CCNGG 2 cut(s) 300, 704
MwoI GCNNNNNNNGC 2 cut(s) 11, 671
NciI CCSGG 2 cut(s) 300, 704
NdeI CATATG 1 cut(s) 257
NdeII GATC 6 cut(s) 434, 445, 502, 537, 742, 799
NlaIII CATG 7 cut(s) 245, 411, 443, 700, 743, 779, 836
NlaIV GGNNCC 3 cut(s) 378, 707, 708
NmuCI GTSAC 4 cut(s) 107, 181, 569, 734
NspI RCATGY 3 cut(s) 245, 411, 700
PciI ACATGT 1 cut(s) 696
PfeI GAWTC 3 cut(s) 295, 562, 713
PflFI GACNNNGTC 1 cut(s) 179
PkrI GCNGC 3 cut(s) 13, 595, 842
PleI GAGTC 4 cut(s) 170, 413, 719, 863
PpsI GAGTC 4 cut(s) 170, 413, 719, 863
PscI ACATGT 1 cut(s) 696
PshBI ATTAAT 1 cut(s) 645
PspEI GGTNACC 3 cut(s) 107, 181, 734
PspFI CCCAGC 1 cut(s) 220
PspN4I GGNNCC 3 cut(s) 378, 707, 708
PspOMI GGGCCC 1 cut(s) 706
PspPI GGNCC 2 cut(s) 706, 707
PsuI RGATCY 1 cut(s) 537
PsyI GACNNNGTC 1 cut(s) 179
RsaI GTAC 3 cut(s) 284, 479, 701
RsaNI GTAC 3 cut(s) 283, 478, 700
RseI CAYNNNNRTG 1 cut(s) 269
SaqAI TTAA 2 cut(s) 312, 645
SatI GCNGC 3 cut(s) 12, 594, 841
Sau3AI GATC 6 cut(s) 434, 445, 502, 537, 742, 799
Sau96I GGNCC 2 cut(s) 706, 707
SchI GAGTC 4 cut(s) 170, 413, 719, 863
ScrFI CCNGG 2 cut(s) 300, 704
SduI GDGCHC 3 cut(s) 552, 696, 710
SfaNI GCATC 1 cut(s) 652
SmiMI CAYNNNNRTG 1 cut(s) 269
Sse9I AATT 3 cut(s) 318, 597, 850
SsiI CCGC 8 cut(s) 9, 51, 70, 245, 474, 747, 816, 840
SspMI CTAG 1 cut(s) 579
StyD4I CCNGG 2 cut(s) 298, 702
TaaI ACNGT 1 cut(s) 88
TaqI TCGA 1 cut(s) 412
TaqII GACCGA 1 cut(s) 169
TasI AATT 3 cut(s) 318, 597, 850
TauI GCSGC 1 cut(s) 843
TfiI GAWTC 3 cut(s) 295, 562, 713
Tru1I TTAA 2 cut(s) 312, 645
Tru9I TTAA 2 cut(s) 312, 645
TscAI CASTG 2 cut(s) 91, 119
TseFI GTSAC 4 cut(s) 107, 181, 569, 734
TseI GCWGC 2 cut(s) 11, 593
Tsp45I GTSAC 4 cut(s) 107, 181, 569, 734
TspDTI ATGAA 2 cut(s) 545, 792
TspGWI ACGGA 2 cut(s) 11, 635
TspRI CASTG 2 cut(s) 91, 119
Tth111I GACNNNGTC 1 cut(s) 179
VspI ATTAAT 1 cut(s) 645
XceI RCATGY 3 cut(s) 245, 411, 700
XcmI CCANNNNNNNNNTGG 2 cut(s) 196, 746
XspI CTAG 1 cut(s) 579
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.