Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0008536.1

Orthogroup ID

OG0000648

Physical Location & Seq

Genomic Coordinates Reverse (-)

60482 .. 66181

Gene Structure 5700 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0008536.1_g000010.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2580 bp

atgtcacagttcaaaggccaatctcggcttcccaaattcgccgtgccgaaacgctacgacgtaaggctcagacccgacctcgtcgcctgccaattcgtcggctccgtcgccatcgacctcgacatcgtctccgatacccgcttcatcgtcctcaacgccgccgagctctccgtcgacccccctgccgtgtccttcactcaactagactcttccaaggttttcaagccatcgaaagttgacggatttgaagatgatggcattttggtcgtggagtttgaggagacgattccagttgggctgggagttttggctattgggtttcaaggaattttgaatgacaagatgaagggattctatagaagtacgtatgagcataatggggagaagaaaaacatggctgttacacagtttgaaccggttgatgccaggcgctgctttccgtgttgggatgaacctgcttgcaaggctacattcaaaattacattggaggatgtaccatctgaattggtagctctttccaacatgccagtttcacaagaaatagtgaatggacatcggaagacagtttcatatcaggagacaccaattatgtctacatatttggtggccattgttgttggattgttcgattacgttgaagatcacacttctgatggggtcaaagtgagggtctattgtcaagttggtaaggaaaaccaagggaaatttgctttgcaggttgctgtcaagacacttgaattgtacaaaaaatactttggtgtgccttaccctttgccaaaattggatatggtcgcaatccctgatttttcagctggggccatggagaattatggtttagttacataccgtgagacagctttgctctttgatgatcagcattcttcagcttccgtcaagcaaaatgttacaataaccgtagcacatgaattggcacaccagtggtttggcaatcttgtaaccatggaatggtggacacatttatggctcaatgagggatttgcaacatgggtgagctatttagctactgagagcttgtttcctgagtggaaaatatggactcagtttcttgatgaatctactgagggtcttaagctggatggtcttgaagaatcccaccccatcgaggtggagataaatcatgctgctgaggttgatgaaatatttgatgcaataagttatactaaaggtgcttctgttattaggatgctacaaaattatcttggtgctgcaccctttgagaggtcactggctgcatatgtaaagaaacatgcttactcaaatgcaaagacagaagacttatgggctgcccttgaagagggatctggtgaacctgtgaacaagctgatgaattcgtggacgcagcagaaaggctacccagttgtttctgtcgaagtcaaagatcaaaaattgaagtttgatcagacacaattcttgtcaagtggttcccaaggcgaaggagaatggattgtgccaataacattatgctgtggctcatatgatttacgcaagagcttcctactcaaaactaagtctgaaactcttgacataaaggaatttctagatcaagctggtttttacagggtgaaatatgatgagaaacttgcagctacactaagaaatgctatacagaacaaacacttgtctgcaacagacagatttggcattttggatgattcatatgccctttctatggctcgtcagctgtcttttgcttcgttgcttaccttgttggctgcttacaaagaggaacttgactatacagtcctgtcaaatttgatttctattagtcaaaagctcgcaagaattgcagctgatgcaatacccgagctacttgatctcatcaatcagttctttattggccttcttcagtactctgcagagaagcttggttggcagcccaaacccggtgagagccatttagatgcaatgttgagaggggaagttttgaccacccttgctttatttggacatgacctgacaattaatgaagcaaggaggcgttttcatgcctacatagatgacagaaatacgcctctccttcctcctgacattagaaaggcagcatatgtggctgtaatgcaaacagtaacccaatcaaacagagcaggctatgactctcttcttagagtttacagagagagtgatcaaagcgaggagaaaaaccgcattttaggttcattagcatcctgtccagatccagacattatactggaagttctcaactttttgttgacttcagaggtccgcaaccaggatgctatttttggacttgctgtttgtagtaaaggacgggaaacagcttggacttggctgaaggataactgggagaaaatctcaaagacctggggttctggatttctaattactcgctttgtcagtgcaattgtttcaccgcttgcttcatttgagaaggttgagcaagtagaggagttcttcaaagcccatcctaaccctgccataactagaaccttgaagcagagcattgagcgagtacagattaacgccaagtgggttcagagtgttcagggtgagaaagatcttcccaaggttttgaaggagttggcttccaggaaatactag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001666 GO:0003674 GO:0003824 GO:0004177 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0006508 GO:0006518 GO:0006807 GO:0006810 GO:0006950 GO:0008144 GO:0008150 GO:0008152 GO:0008233 GO:0008235 GO:0008237 GO:0008238 GO:0008270 GO:0009056 GO:0009628 GO:0009914 GO:0009926 GO:0009987 GO:0010013 GO:0010817 GO:0016020 GO:0016787 GO:0019538 GO:0031090 GO:0031406 GO:0033218 GO:0033293 GO:0033554 GO:0034641 GO:0036094 GO:0036293 GO:0036294 GO:0042221 GO:0042277 GO:0043167 GO:0043168 GO:0043169 GO:0043170 GO:0043171 GO:0043177 GO:0043226 GO:0043227 GO:0043603 GO:0044237 GO:0044238 GO:0044248 GO:0044422 GO:0044424 GO:0044444 GO:0044464 GO:0046872 GO:0046914 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0060918 GO:0065007 GO:0065008 GO:0070006 GO:0070011 GO:0070482 GO:0070887 GO:0071453 GO:0071456 GO:0071704 GO:0071944 GO:0097159 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ERAP1_C Peptidase_M1

Protein Analysis

859

Amino Acids

96.81

Weight (kDa)

5.37

Isoelectric Point (pI)

32.46

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000648)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G33090
fragaria_vesca	FvH4_2g31431 FvH4_2g31440 FvH4_6g34250 FvH4_6g34262 FvH4_6g34263
malus_domestica	MD08G1066400.v1.1 MD08G1066500.v1.1 MD08G1067400.v1.1 MD09G1070300.v1.1 MD09G1187200.v1.1 MD10G1090900.v1.1 MD15G1054400.v1.1 MD17G1171400.v1.1
prunus_persica	Prupe.1G407900_v2.0.a1 Prupe.1G408000_v2.0.a1 Prupe.1G408000_v2.0.a1 Prupe.1G408000_v2.0.a1 Prupe.1G457300_v2.0.a1 Prupe.3G044500_v2.0.a1 Prupe.3G044500_v2.0.a1
pyrus_communis	pycom08g05520 pycom08g05550 pycom08g05560 pycom08g05590 pycom09g10370 pycom09g10380 pycom10g07440 pycom10g07460 pycom15g05130 pycom15g05150 pycom17g16900
rosa_chinensis	RchiOBHm_Chr2g0144571 RchiOBHm_Chr2g0144611 RchiOBHm_Chr4g0390591 RchiOBHm_Chr6g0311371 RchiOBHm_Chr6g0311381
rosa_laevigata	RLG00000009010 RLG00000009289 RLG00000010411 RLG00000010412 RLG00000020090 RLG00000020092 RLG00000036974
rosa_multiflora	Rmu_co8212940.1_g000001 Rmu_sc0005789.1_g000001 Rmu_sc0008536.1_g000010 Rmu_sc0008536.1_g000011 Rmu_sc0009300.1_g000002
rosa_roxburghii	Rroxscaffold_1G00056400 Rroxscaffold_2G00084720 Rroxscaffold_2G00101200 Rroxscaffold_7G00157670 Rroxscaffold_7G00157680
rosa_rugosa	Rorug02G0387900 Rorug02G0388000 Rorug02G0388100 Rorug06G0388300 Rorug06G0388400
rosa_samantha	Rh2AG440000 Rh2AG440100 Rh2BG450000 Rh2BG450300 Rh2BG450500 Rh2CG427000 Rh2CG427200 Rh2DG459900 Rh2DG460300 Rh2DG460500 Rh6AG502600 Rh6AG502700 Rh6BG513300 Rh6CG519100 Rh6CG519200
rosa_wichuraiana	Rw2G036000 Rw6G043770 Rw6G043780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1760
Acc36I	ACCTGC	2 cut(s)	463, 706
AccB7I	CCANNNNNTGG	1 cut(s)	966
AccI	GTMKAC	2 cut(s)	174, 593
AciI	CCGC	5 cut(s)	139, 159, 2164, 2245, 2393
AclWI	GGATC	2 cut(s)	1327, 2189
AcoI	YGGCCR	1 cut(s)	606
AcsI	RAATTY	6 cut(s)	35, 327, 704, 1348, 1553, 1771
AcuI	CTGAAG	4 cut(s)	867, 1850, 2220, 2333
AfaI	GTAC	5 cut(s)	364, 495, 743, 1871, 2493
AfiI	CCNNNNNNNGG	7 cut(s)	966, 1123, 1239, 1315, 1690, 1904, 2251
AflII	CTTAAG	1 cut(s)	1088
AgeI	ACCGGT	1 cut(s)	415
AjnI	CCWGG	4 cut(s)	425, 2250, 2342, 2567
AjuI	GAANNNNNNNTTGG	2 cut(s)	12, 44
AleI	CACNNNNGTG	1 cut(s)	937
Alw21I	GWGCWC	1 cut(s)	168
Alw26I	GTCTC	4 cut(s)	133, 275, 572, 845
AlwI	GGATC	2 cut(s)	1327, 2189
AlwNI	CAGNNNCTG	1 cut(s)	432
Ama87I	CYCGRG	1 cut(s)	1823
AoxI	GGCC	4 cut(s)	16, 606, 816, 1858
ApoI	RAATTY	6 cut(s)	35, 327, 704, 1348, 1553, 1771
ArsI	GACNNNNNNTTYG	4 cut(s)	654, 686, 2259, 2291
AseI	ATTAAT	1 cut(s)	1983
AsiGI	ACCGGT	1 cut(s)	415
Asp700I	GAANNNNTTC	1 cut(s)	350
AspLEI	GCGC	1 cut(s)	432
AspS9I	GGNCC	2 cut(s)	816, 2242
AsuC2I	CCSGG	1 cut(s)	1905
AsuHPI	GGTGA	6 cut(s)	1021, 1337, 1594, 1919, 2382, 2540
AvaI	CYCGRG	1 cut(s)	1823
AvaII	GGWCC	1 cut(s)	2242
BalI	TGGCCA	1 cut(s)	608
BanII	GRGCYC	1 cut(s)	168
BbsI	GAAGAC	2 cut(s)	566, 1299
Bbv12I	GWGCWC	1 cut(s)	168
BbvCI	CCTCAGC	1 cut(s)	1146
BccI	CCATC	8 cut(s)	119, 235, 248, 505, 647, 1091, 1127, 2451
BceAI	ACGGC	2 cut(s)	26, 170
BcgI	CGANNNNNNTGC	4 cut(s)	164, 198, 247, 281
BciT130I	CCWGG	4 cut(s)	427, 2252, 2344, 2569
BclI	TGATCA	3 cut(s)	871, 1417, 2143
BcnI	CCSGG	1 cut(s)	1905
BcoDI	GTCTC	4 cut(s)	133, 275, 572, 845
BfaI	CTAG	4 cut(s)	203, 1559, 2463, 2578
BfmI	CTRYAG	2 cut(s)	355, 1875
BfoI	RGCGCY	1 cut(s)	433
BfrI	CTTAAG	1 cut(s)	1088
BfuAI	ACCTGC	2 cut(s)	463, 706
BglII	AGATCT	1 cut(s)	2536
BmcAI	AGTACT	1 cut(s)	1871
Bme1390I	CCNGG	5 cut(s)	427, 1905, 2252, 2344, 2569
Bme18I	GGWCC	1 cut(s)	2242
BmeT110I	CYCGRG	1 cut(s)	1823
BmgT120I	GGNCC	2 cut(s)	816, 2242
BmiI	GGNNCC	3 cut(s)	103, 817, 1444
BmrFI	CCNGG	5 cut(s)	427, 1905, 2252, 2344, 2569
BmrI	ACTGGG	2 cut(s)	1370, 2332
BmsI	GCATC	7 cut(s)	412, 1156, 1194, 1804, 1912, 2192, 2245
BmuI	ACTGGG	2 cut(s)	1370, 2332
BpiI	GAAGAC	2 cut(s)	566, 1299
BplI	GAGNNNNNCTC	2 cut(s)	2318, 2350
Bpu10I	CCTNAGC	1 cut(s)	1146
BpuMI	CCSGG	1 cut(s)	1905
BsaAI	YACGTR	1 cut(s)	366
BsaJI	CCNNGG	7 cut(s)	213, 697, 819, 960, 1447, 2343, 2544
BsaWI	WCCGGW	1 cut(s)	415
BsaXI	ACNNNNNCTCC	2 cut(s)	113, 143
Bsc4I	CCNNNNNNNGG	7 cut(s)	966, 1123, 1239, 1315, 1690, 1904, 2251
Bse118I	RCCGGY	1 cut(s)	415
Bse1I	ACTGG	7 cut(s)	290, 527, 937, 1251, 1376, 2214, 2327
Bse3DI	GCAATG	1 cut(s)	1932
BseBI	CCWGG	4 cut(s)	427, 2252, 2344, 2569
BseDI	CCNNGG	7 cut(s)	213, 697, 819, 960, 1447, 2343, 2544
BseGI	GGATG	8 cut(s)	454, 496, 1102, 1209, 1675, 2183, 2260, 2443
BseLI	CCNNNNNNNGG	7 cut(s)	966, 1123, 1239, 1315, 1690, 1904, 2251
BseMI	GCAATG	1 cut(s)	1932
BseMII	CTCAG	6 cut(s)	82, 1017, 1032, 1071, 1073, 1137
BseNI	ACTGG	7 cut(s)	290, 527, 937, 1251, 1376, 2214, 2327
BseRI	GAGGAG	3 cut(s)	293, 2168, 2441
BseYI	CCCAGC	2 cut(s)	298, 812
BsgI	GTGCAG	1 cut(s)	1212
BshFI	GGCC	4 cut(s)	18, 608, 818, 1860
BshTI	ACCGGT	1 cut(s)	415
BsiHKAI	GWGCWC	1 cut(s)	168
BsiHKCI	CYCGRG	1 cut(s)	1823
BsiSI	CCGG	2 cut(s)	416, 1905
BslI	CCNNNNNNNGG	7 cut(s)	966, 1123, 1239, 1315, 1690, 1904, 2251
BsmAI	GTCTC	4 cut(s)	133, 275, 572, 845
BsmBI	CGTCTC	2 cut(s)	133, 275
BsmI	GAATGC	1 cut(s)	877
BsnI	GGCC	4 cut(s)	18, 608, 818, 1860
BsoBI	CYCGRG	1 cut(s)	1823
Bsp1286I	GDGCHC	1 cut(s)	168
Bsp1407I	TGTACA	1 cut(s)	741
Bsp19I	CCATGG	2 cut(s)	819, 960
BspACI	CCGC	5 cut(s)	139, 159, 2164, 2245, 2393
BspANI	GGCC	4 cut(s)	18, 608, 818, 1860
BspCNI	CTCAG	6 cut(s)	81, 1018, 1033, 1072, 1072, 1138
BspLI	GGNNCC	3 cut(s)	103, 817, 1444
BspMAI	CTGCAG	1 cut(s)	1879
BspMI	ACCTGC	2 cut(s)	463, 706
BspPI	GGATC	2 cut(s)	1327, 2189
BspTI	CTTAAG	1 cut(s)	1088
BsrDI	GCAATG	1 cut(s)	1932
BsrFI	RCCGGY	1 cut(s)	415
BsrGI	TGTACA	1 cut(s)	741
BsrI	ACTGG	7 cut(s)	290, 527, 937, 1251, 1376, 2214, 2327
BssAI	RCCGGY	1 cut(s)	415
BssECI	CCNNGG	7 cut(s)	213, 697, 819, 960, 1447, 2343, 2544
BssT1I	CCWWGG	6 cut(s)	213, 697, 819, 960, 1447, 2544
Bst2UI	CCWGG	4 cut(s)	427, 2252, 2344, 2569
Bst4CI	ACNGT	7 cut(s)	9, 408, 565, 848, 916, 1762, 2086
Bst6I	CTCTTC	3 cut(s)	214, 1308, 2124
BstAFI	CTTAAG	1 cut(s)	1088
BstAPI	GCANNNNNTGC	2 cut(s)	1805, 1814
BstAUI	TGTACA	1 cut(s)	741
BstBAI	YACGTR	1 cut(s)	366
BstC8I	GCNNGC	5 cut(s)	88, 460, 1797, 2107, 2397
BstDEI	CTNAG	9 cut(s)	68, 1026, 1041, 1059, 1080, 1146, 1527, 1613, 2123
BstDSI	CCRYGG	2 cut(s)	819, 960
BstENI	CCTNNNNNAGG	2 cut(s)	1237, 1313
BstF5I	GGATG	8 cut(s)	454, 496, 1102, 1209, 1675, 2183, 2260, 2443
BstH2I	RGCGCY	1 cut(s)	433
BstHHI	GCGC	1 cut(s)	432
BstMAI	GTCTC	4 cut(s)	133, 275, 572, 845
BstMWI	GCNNNNNNNGC	5 cut(s)	464, 1805, 1814, 1891, 2069
BstNI	CCWGG	4 cut(s)	427, 2252, 2344, 2569
BstNSI	RCATGY	2 cut(s)	526, 1271
BstSCI	CCNGG	5 cut(s)	425, 1903, 2250, 2342, 2567
BstSFI	CTRYAG	2 cut(s)	355, 1875
BstSNI	TACGTA	1 cut(s)	366
BstV2I	GAAGAC	2 cut(s)	566, 1299
BstX2I	RGATCY	3 cut(s)	1319, 2194, 2536
BstXI	CCANNNNNNTGG	2 cut(s)	944, 1126
BstYI	RGATCY	3 cut(s)	1319, 2194, 2536
BsuRI	GGCC	4 cut(s)	18, 608, 818, 1860
BtgI	CCRYGG	2 cut(s)	819, 960
BtsCI	GGATG	8 cut(s)	454, 496, 1102, 1209, 1675, 2183, 2260, 2443
BtsIMutI	CAGTG	3 cut(s)	944, 1244, 2383
BveI	ACCTGC	2 cut(s)	463, 706
Cac8I	GCNNGC	5 cut(s)	88, 460, 1797, 2107, 2397
CaiI	CAGNNNCTG	1 cut(s)	432
CfoI	GCGC	1 cut(s)	432
Cfr10I	RCCGGY	1 cut(s)	415
Cfr13I	GGNCC	2 cut(s)	816, 2242
CseI	GACGC	1 cut(s)	1366
Csp6I	GTAC	5 cut(s)	363, 494, 742, 1870, 2492
CspAI	ACCGGT	1 cut(s)	415
CviQI	GTAC	5 cut(s)	363, 494, 742, 1870, 2492
DdeI	CTNAG	9 cut(s)	68, 1026, 1041, 1059, 1080, 1146, 1527, 1613, 2123
DrdI	GACNNNNNNGTC	1 cut(s)	1760
DseDI	GACNNNNNNGTC	1 cut(s)	1760
EaeI	YGGCCR	1 cut(s)	606
Eam1104I	CTCTTC	3 cut(s)	214, 1308, 2124
EarI	CTCTTC	3 cut(s)	214, 1308, 2124
Ecl136II	GAGCTC	1 cut(s)	166
Eco105I	TACGTA	1 cut(s)	366
Eco130I	CCWWGG	6 cut(s)	213, 697, 819, 960, 1447, 2544
Eco24I	GRGCYC	1 cut(s)	168
Eco47I	GGWCC	1 cut(s)	2242
Eco53kI	GAGCTC	1 cut(s)	166
Eco57I	CTGAAG	4 cut(s)	867, 1850, 2220, 2333
Eco88I	CYCGRG	1 cut(s)	1823
EcoICRI	GAGCTC	1 cut(s)	166
EcoNI	CCTNNNNNAGG	2 cut(s)	1237, 1313
EcoRI	GAATTC	1 cut(s)	1348
EcoRII	CCWGG	4 cut(s)	425, 2250, 2342, 2567
EcoT14I	CCWWGG	6 cut(s)	213, 697, 819, 960, 1447, 2544
EcoT38I	GRGCYC	1 cut(s)	168
ErhI	CCWWGG	6 cut(s)	213, 697, 819, 960, 1447, 2544
Esp3I	CGTCTC	2 cut(s)	133, 275
FalI	AAGNNNNNCTT	2 cut(s)	1734, 1766
FauI	CCCGC	1 cut(s)	146
FauNDI	CATATG	4 cut(s)	1255, 1495, 1678, 2065
FbaI	TGATCA	3 cut(s)	871, 1417, 2143
FblI	GTMKAC	2 cut(s)	174, 593
FokI	GGATG	8 cut(s)	461, 503, 1109, 1216, 1682, 2170, 2267, 2430
FriOI	GRGCYC	1 cut(s)	168
FspBI	CTAG	4 cut(s)	203, 1559, 2463, 2578
GlaI	GCGC	1 cut(s)	431
GsaI	CCCAGC	2 cut(s)	302, 816
HaeII	RGCGCY	1 cut(s)	433
HaeIII	GGCC	4 cut(s)	18, 608, 818, 1860
HapII	CCGG	2 cut(s)	416, 1905
HgaI	GACGC	1 cut(s)	1366
HhaI	GCGC	1 cut(s)	432
Hin6I	GCGC	1 cut(s)	430
HinP1I	GCGC	1 cut(s)	430
HincII	GTYRAC	3 cut(s)	175, 238, 2232
HindII	GTYRAC	3 cut(s)	175, 238, 2232
HindIII	AAGCTT	1 cut(s)	1883
HinfI	GANTC	8 cut(s)	206, 286, 351, 1057, 1073, 1109, 1673, 2114
HpaII	CCGG	2 cut(s)	416, 1905
HphI	GGTGA	6 cut(s)	1021, 1337, 1594, 1919, 2382, 2540
Hpy166II	GTNNAC	9 cut(s)	175, 238, 594, 972, 1328, 1336, 1356, 2131, 2232
Hpy188I	TCNGA	9 cut(s)	71, 133, 502, 558, 652, 1422, 1534, 2239, 2517
Hpy8I	GTNNAC	9 cut(s)	175, 238, 594, 972, 1328, 1336, 1356, 2131, 2232
Hpy99I	CGWCG	5 cut(s)	62, 86, 101, 110, 176
HpyAV	CCTTC	8 cut(s)	202, 340, 1448, 1871, 2048, 2308, 2404, 2548
HpyCH4III	ACNGT	7 cut(s)	9, 408, 565, 848, 916, 1762, 2086
HpyCH4IV	ACGT	3 cut(s)	60, 365, 633
HpyF10VI	GCNNNNNNNGC	5 cut(s)	464, 1805, 1814, 1891, 2069
HpyF3I	CTNAG	9 cut(s)	68, 1026, 1041, 1059, 1080, 1146, 1527, 1613, 2123
HpySE526I	ACGT	3 cut(s)	60, 365, 633
HspAI	GCGC	1 cut(s)	430
Ksp22I	TGATCA	3 cut(s)	871, 1417, 2143
LmnI	GCTCC	1 cut(s)	107
LweI	GCATC	7 cut(s)	412, 1156, 1194, 1804, 1912, 2192, 2245
MaeI	CTAG	4 cut(s)	203, 1559, 2463, 2578
MaeII	ACGT	3 cut(s)	60, 365, 633
MaeIII	GTNAC	7 cut(s)	3, 400, 838, 904, 955, 1242, 2086
MfeI	CAATTG	1 cut(s)	2382
MflI	RGATCY	3 cut(s)	1319, 2194, 2536
MhlI	GDGCHC	1 cut(s)	168
MlsI	TGGCCA	1 cut(s)	608
MluNI	TGGCCA	1 cut(s)	608
MlyI	GAGTC	3 cut(s)	200, 1051, 2108
MmeI	TCCRAC	2 cut(s)	543, 598
Mox20I	TGGCCA	1 cut(s)	608
MroXI	GAANNNNTTC	1 cut(s)	350
MscI	TGGCCA	1 cut(s)	608
MseI	TTAA	3 cut(s)	1089, 1983, 2499
MslI	CAYNNNNRTG	4 cut(s)	937, 979, 1124, 1920
Msp20I	TGGCCA	1 cut(s)	608
MspA1I	CMGCKG	3 cut(s)	812, 1702, 1811
MspCI	CTTAAG	1 cut(s)	1088
MspI	CCGG	2 cut(s)	416, 1905
MspR9I	CCNGG	5 cut(s)	427, 1905, 2252, 2344, 2569
MunI	CAATTG	1 cut(s)	2382
Mva1269I	GAATGC	1 cut(s)	877
MvaI	CCWGG	4 cut(s)	427, 2252, 2344, 2569
MwoI	GCNNNNNNNGC	5 cut(s)	464, 1805, 1814, 1891, 2069
NciI	CCSGG	1 cut(s)	1905
NcoI	CCATGG	2 cut(s)	819, 960
NdeI	CATATG	4 cut(s)	1255, 1495, 1678, 2065
NlaIV	GGNNCC	3 cut(s)	103, 817, 1444
NmeAIII	GCCGAG	2 cut(s)	4, 187
NmuCI	GTSAC	2 cut(s)	3, 1242
NspI	RCATGY	2 cut(s)	526, 1271
OliI	CACNNNNGTG	1 cut(s)	937
PcsI	WCGNNNNNNNCGW	1 cut(s)	102
PctI	GAATGC	1 cut(s)	877
PdmI	GAANNNNTTC	1 cut(s)	350
PfeI	GAWTC	5 cut(s)	286, 351, 1073, 1109, 1673
PflFI	GACNNNGTC	2 cut(s)	80, 125
PflMI	CCANNNNNTGG	1 cut(s)	966
PfoI	TCCNGGA	1 cut(s)	2567
PinAI	ACCGGT	1 cut(s)	415
PleI	GAGTC	3 cut(s)	200, 1051, 2108
PpsI	GAGTC	3 cut(s)	200, 1051, 2108
Ppu21I	YACGTR	1 cut(s)	366
PshBI	ATTAAT	1 cut(s)	1983
Psp124BI	GAGCTC	1 cut(s)	168
Psp6I	CCWGG	4 cut(s)	425, 2250, 2342, 2567
PspFI	CCCAGC	2 cut(s)	298, 812
PspGI	CCWGG	4 cut(s)	425, 2250, 2342, 2567
PspN4I	GGNNCC	3 cut(s)	103, 817, 1444
PspPI	GGNCC	2 cut(s)	816, 2242
PstI	CTGCAG	1 cut(s)	1879
PstNI	CAGNNNCTG	1 cut(s)	432
PsuI	RGATCY	3 cut(s)	1319, 2194, 2536
PsyI	GACNNNGTC	2 cut(s)	80, 125
PvuII	CAGCTG	3 cut(s)	812, 1702, 1811
RsaI	GTAC	5 cut(s)	364, 495, 743, 1871, 2493
RsaNI	GTAC	5 cut(s)	363, 494, 742, 1870, 2492
RseI	CAYNNNNRTG	4 cut(s)	937, 979, 1124, 1920
SacI	GAGCTC	1 cut(s)	168
SalI	GTCGAC	1 cut(s)	173
SaqAI	TTAA	3 cut(s)	1089, 1983, 2499
Sau96I	GGNCC	2 cut(s)	816, 2242
ScaI	AGTACT	1 cut(s)	1871
SchI	GAGTC	3 cut(s)	200, 1051, 2108
ScrFI	CCNGG	5 cut(s)	427, 1905, 2252, 2344, 2569
SduI	GDGCHC	1 cut(s)	168
SfaNI	GCATC	7 cut(s)	412, 1156, 1194, 1804, 1912, 2192, 2245
SfcI	CTRYAG	2 cut(s)	355, 1875
SinI	GGWCC	1 cut(s)	2242
SmiMI	CAYNNNNRTG	4 cut(s)	937, 979, 1124, 1920
SmlI	CTYRAG	1 cut(s)	1088
SmoI	CTYRAG	1 cut(s)	1088
SnaBI	TACGTA	1 cut(s)	366
SsiI	CCGC	5 cut(s)	139, 159, 2164, 2245, 2393
SspI	AATATT	1 cut(s)	1161
SspMI	CTAG	4 cut(s)	203, 1559, 2463, 2578
SstI	GAGCTC	1 cut(s)	168
StyD4I	CCNGG	5 cut(s)	425, 1903, 2250, 2342, 2567
StyI	CCWWGG	6 cut(s)	213, 697, 819, 960, 1447, 2544
TaaI	ACNGT	7 cut(s)	9, 408, 565, 848, 916, 1762, 2086
TaiI	ACGT	3 cut(s)	63, 368, 636
TaqI	TCGA	7 cut(s)	114, 120, 174, 230, 627, 1122, 1389
TatI	WGTACW	3 cut(s)	741, 1869, 2491
TauI	GCSGC	1 cut(s)	161
TfiI	GAWTC	5 cut(s)	286, 351, 1073, 1109, 1673
Tru1I	TTAA	3 cut(s)	1089, 1983, 2499
Tru9I	TTAA	3 cut(s)	1089, 1983, 2499
TscAI	CASTG	3 cut(s)	944, 1251, 2383
TseFI	GTSAC	2 cut(s)	3, 1242
Tsp45I	GTSAC	2 cut(s)	3, 1242
TspGWI	ACGGA	5 cut(s)	94, 160, 255, 429, 880
TspRI	CASTG	3 cut(s)	944, 1251, 2383
Tth111I	GACNNNGTC	2 cut(s)	80, 125
Van91I	CCANNNNNTGG	1 cut(s)	966
Vha464I	CTTAAG	1 cut(s)	1088
VpaK11BI	GGWCC	1 cut(s)	2242
VspI	ATTAAT	1 cut(s)	1983
XagI	CCTNNNNNAGG	2 cut(s)	1237, 1313
XapI	RAATTY	6 cut(s)	35, 327, 704, 1348, 1553, 1771
XbaI	TCTAGA	1 cut(s)	1558
XceI	RCATGY	2 cut(s)	526, 1271
XmiI	GTMKAC	2 cut(s)	174, 593
XmnI	GAANNNNTTC	1 cut(s)	350
XspI	CTAG	4 cut(s)	203, 1559, 2463, 2578
ZrmI	AGTACT	1 cut(s)	1871

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.