Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0000648

Physical Location & Seq

Genomic Coordinates Forward (+)

35746996 .. 35753338

Gene Structure 6343 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G408000.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2658 bp

ATGGAGCAGTTCAAGGGCCAACCTCGCCTTCCGATATTCGCCGTCCCTAAACAATACGACATACGCCTCAAACCGGACCTCACTGCTTGCAAATTCGGCGGCTCCGTCGCCGTCGATCTCGATATCGTCGCCGATACCCGATTCATCGTCCTCAACGCCGCCAAGCTCTCTGTTAACGCCGGTTCTGTGTCTTTCACTCACCAGGACTCTTCCAAGGTTTTCAACCCTTCAAAACTTGAGATATTCGAAGAAGATGGGATTTTGGTTTTGGAGTTTGGGGAGAAACTTCCATTTGGGCTGGGAGTTTTGGCTATTTCTTTTGAAGGAATCTTGAATGACAACATGAAGGGGTTTTATAGAAGTACATATGAGCATAATGCTGAGAAGAAAAATATGGCAGTTACACAGTTTGAACCGGTTGACGCCAGGCGGTGCTTTCCATGTTGGGATGAACCTGCTTGGAAGGCTACATTCAAGATTACATTGGCTGATGTTCCGTCTGAATTAGTAACTCTTTCCAACATGCCGGTTGTAGAAGAAAAAGTGGATGGACATCTGAAGACAGTTTCATATCTGGAGTCACCAATTATGTCTACATATTTGGTGGCCATTGTTGTTGGATTGTTTGATTATGTTGAAGATCATACATCTGATGGGGTCAAAGTGCGGGTATATTGCCAAGTTGGTAAGGCAAACCAAGGGAAATTTGCATTGAGCGTTGCTGTCAGGACACTTGAATTGTACAAAGAATACTTTGCTGTGCCCTACTCTTTGCCCAAATTGGATATGGTTGCAATCCCTGATTTTTCTGCCGAGGCCATGGAGAATTATGGTTTAGTTACGTACCGTGATGCAGCTTTGCTCTTTGATGAGCAGCATTCTGCAGCTTCCAACAAGCAAAATGTTGCAGTTGCCGTGGCACATGAACTGGCTCACCAGTGGTTTGGCAATCTTGTAACGATGGAATGGTGGACACATTTGTGGCTGAACGAGGGATTTGCAACATGGGTGAGCTATTTAGCTACTGATAACTTGTTCCCAGAGTGGCAAATATGGACTCAGTTTCTTGATGAATGTACTGGGGGTCTTAGGCTGGATGCTCTTGAAGAATCTCACCCCATCGAGGTGGAGATAAATCATGCTGATGAGGTTGATGAAATATTTGATGACATAAGTTATACAAAAGGTGCTTTTCTTATCCTGATGCTACAAAGCTATCTCGGCGCTGAATGCTTTCAGAGGTCACTTGCTTCATATATAAGAAAGCACGCATCCTCAAATGCAAAGACAGAAGATTTATGGGCTGCCCTTGAGGAGGGATCTGGTGAACCTGTGAACAAGCTAATGAATTCATGGACTCAGCAAAAAGGTTACCCAGTTGTTTCCATCAAAATCAAAGATCAGAAATTGGAGTTTGATCAGACGCACTTCTTGTCAAGTGGTTCTCAAGGTGATGGACAATGGATTGTGCCGATAACATTATGTTGTGGCTCATATAATGTACGCAAGAGTTTCCTACTGCAAACGAAGTCTAGAACTCTTGACATAAAGGAATTTCTGGGTTGCTCAATATCAGAGACTGGAAGTAGAGGAAGCAACGAAAACAATGCATTATGCAGCTGGATAAAAGTCAATGTGGATCAGACTGGTTTTTACAGGGTGAAATATGATGAGGAACTTGCTGATAAACTTAGAAATGCTATAGAGAACAAATACTTGTCTGCAACTGACAGATTTGGAGTTTTAGATGATTCATTTGCCCTTTCTATGGCTTGCCAGCAGTCTTTTGCATCATTGCTTACCTTGTTGGATGCTTACAGAGAGGAACTGGACTTTACAGTGCTGTCAAATTTGATTACCATAAGCTATAAGCTGGCAAGAATTGCAGCTGATGCTGTACCCGAGCTACTGGATCTCATTAATCAATTCCTTATTGGCCTTCTCCAGTACTCTGCACAGAAGCTTGGTTGGGACCCTAAACCCGGCGAGAGTCATTTAGATGCAATGTTGAGAGGAGAAATTTTAGCTGCCCTTGCTGTGTTTGGACATGACCTGACGATAAATGAAGCAAGTAGGCGCTTTCATGCCTTCTTAGATGACAGAAATACGGCACTCCTTCCTGCTGACATAAGAAAGGCAGTGTATGTGGCTGTAATGCGAAGAGTAAGCACGTCTAACAGATCAGGCTATGAATCTCTTCTTAGAGTTTACAGAGAGACTGATCTAAGCCAGGAGAAAAACCGCATTTTAAGTTCATTAGCATCGTGTCCTGATCCAATCATAACACTGGAAGTTCTCAACTTTTTATTGACTTCTGAGGTCCGCAGTCAGGACGCTATCATGGGACTTTATGTTAGTAGTAAAGGACGGGAAACAGCTTGGACGTGGCTGAAGGATAACTGGGAGCACATCTCGAACACCTGGAGTTCCGGATTTCTAATGACCTGCTTTGTCACAGCAATTGTTTCTCCGTTTGCTTCAATTGAGAAGGTGAAGGAAATAGATGAGTTCTTCAAAGCACGTCCTAACCCTTCAATAACTAGAACCTTGAAGCAGAGCATCGAGAGGGTACGCATCAACGCCAAGTGGGTTCAGAGTGTTGATAGTGAGAAAAATCTTGCTGATGTTGTGAAGGAGTTGGTGCACAGGAAATACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001666 GO:0003674 GO:0003824 GO:0004177 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0006508 GO:0006518 GO:0006807 GO:0006810 GO:0006950 GO:0008144 GO:0008150 GO:0008152 GO:0008233 GO:0008235 GO:0008237 GO:0008238 GO:0008270 GO:0009056 GO:0009628 GO:0009914 GO:0009926 GO:0009987 GO:0010013 GO:0010817 GO:0016020 GO:0016787 GO:0019538 GO:0031090 GO:0031406 GO:0033218 GO:0033293 GO:0033554 GO:0034641 GO:0036094 GO:0036293 GO:0036294 GO:0042221 GO:0042277 GO:0043167 GO:0043168 GO:0043169 GO:0043170 GO:0043171 GO:0043177 GO:0043226 GO:0043227 GO:0043603 GO:0044237 GO:0044238 GO:0044248 GO:0044422 GO:0044424 GO:0044444 GO:0044464 GO:0046872 GO:0046914 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0060918 GO:0065007 GO:0065008 GO:0070006 GO:0070011 GO:0070482 GO:0070887 GO:0071453 GO:0071456 GO:0071704 GO:0071944 GO:0097159 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ERAP1_C Peptidase_M1

Protein Analysis

886

Amino Acids

99.8

Weight (kDa)

5.19

Isoelectric Point (pI)

34.28

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000648)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G33090
fragaria_vesca	FvH4_2g31431 FvH4_2g31440 FvH4_6g34250 FvH4_6g34262 FvH4_6g34263
malus_domestica	MD08G1066400.v1.1 MD08G1066500.v1.1 MD08G1067400.v1.1 MD09G1070300.v1.1 MD09G1187200.v1.1 MD10G1090900.v1.1 MD15G1054400.v1.1 MD17G1171400.v1.1
prunus_persica	Prupe.1G407900_v2.0.a1 Prupe.1G408000_v2.0.a1 Prupe.1G408000_v2.0.a1 Prupe.1G408000_v2.0.a1 Prupe.1G457300_v2.0.a1 Prupe.3G044500_v2.0.a1 Prupe.3G044500_v2.0.a1
pyrus_communis	pycom08g05520 pycom08g05550 pycom08g05560 pycom08g05590 pycom09g10370 pycom09g10380 pycom10g07440 pycom10g07460 pycom15g05130 pycom15g05150 pycom17g16900
rosa_chinensis	RchiOBHm_Chr2g0144571 RchiOBHm_Chr2g0144611 RchiOBHm_Chr4g0390591 RchiOBHm_Chr6g0311371 RchiOBHm_Chr6g0311381
rosa_laevigata	RLG00000009010 RLG00000009289 RLG00000010411 RLG00000010412 RLG00000020090 RLG00000020092 RLG00000036974
rosa_multiflora	Rmu_co8212940.1_g000001 Rmu_sc0005789.1_g000001 Rmu_sc0008536.1_g000010 Rmu_sc0008536.1_g000011 Rmu_sc0009300.1_g000002
rosa_roxburghii	Rroxscaffold_1G00056400 Rroxscaffold_2G00084720 Rroxscaffold_2G00101200 Rroxscaffold_7G00157670 Rroxscaffold_7G00157680
rosa_rugosa	Rorug02G0387900 Rorug02G0388000 Rorug02G0388100 Rorug06G0388300 Rorug06G0388400
rosa_samantha	Rh2AG440000 Rh2AG440100 Rh2BG450000 Rh2BG450300 Rh2BG450500 Rh2CG427000 Rh2CG427200 Rh2DG459900 Rh2DG460300 Rh2DG460500 Rh6AG502600 Rh6AG502700 Rh6BG513300 Rh6CG519100 Rh6CG519200
rosa_wichuraiana	Rw2G036000 Rw6G043770 Rw6G043780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	463, 2453
AccI	GTMKAC	1 cut(s)	593
AccIII	TCCGGA	1 cut(s)	2429
AciI	CCGC	6 cut(s)	99, 159, 430, 667, 2242, 2323
AclWI	GGATC	4 cut(s)	1327, 1647, 1920, 2267
AcoI	YGGCCR	1 cut(s)	606
AcsI	RAATTY	6 cut(s)	92, 704, 1348, 1553, 1849, 2019
AcuI	CTGAAG	2 cut(s)	578, 2411
AcyI	GRCGYC	1 cut(s)	423
AfaI	GTAC	8 cut(s)	364, 743, 845, 1078, 1503, 1899, 1949, 2571
AfiI	CCNNNNNNNGG	6 cut(s)	73, 1123, 1315, 1768, 1982, 2329
AgeI	ACCGGT	1 cut(s)	415
AjiI	CACGTC	3 cut(s)	2172, 2385, 2522
AjnI	CCWGG	4 cut(s)	201, 425, 2229, 2420
AjuI	GAANNNNNNNTTGG	2 cut(s)	12, 44
AleI	CACNNNNGTG	1 cut(s)	979
Alw21I	GWGCWC	2 cut(s)	2409, 2646
Alw26I	GTCTC	2 cut(s)	1571, 2210
Alw44I	GTGCAC	1 cut(s)	2642
AlwI	GGATC	4 cut(s)	1327, 1647, 1920, 2267
AlwNI	CAGNNNCTG	1 cut(s)	1580
Ama87I	CYCGRG	1 cut(s)	1901
Aor13HI	TCCGGA	1 cut(s)	2429
AoxI	GGCC	4 cut(s)	16, 606, 816, 1936
ApaLI	GTGCAC	1 cut(s)	2642
ApeKI	GCWGC	7 cut(s)	854, 874, 884, 1304, 1617, 1886, 2027
ApoI	RAATTY	6 cut(s)	92, 704, 1348, 1553, 1849, 2019
AseI	ATTAAT	1 cut(s)	1920
AsiGI	ACCGGT	1 cut(s)	415
Asp700I	GAANNNNTTC	2 cut(s)	1233, 2196
AspLEI	GCGC	2 cut(s)	1226, 2079
AspS9I	GGNCC	4 cut(s)	16, 76, 1972, 2320
AsuC2I	CCSGG	1 cut(s)	1983
AsuHPI	GGTGA	9 cut(s)	191, 573, 926, 1021, 1106, 1337, 1463, 1672, 2503
AsuII	TTCGAA	1 cut(s)	246
AvaI	CYCGRG	1 cut(s)	1901
AvaII	GGWCC	3 cut(s)	76, 1972, 2320
BaeGI	GKGCMC	2 cut(s)	765, 2646
BalI	TGGCCA	1 cut(s)	608
BbsI	GAAGAC	1 cut(s)	566
Bbv12I	GWGCWC	2 cut(s)	2409, 2646
BbvI	GCAGC	7 cut(s)	866, 886, 896, 1291, 1629, 1898, 2014
BccI	CCATC	7 cut(s)	248, 542, 647, 955, 1127, 1394, 1448
BceAI	ACGGC	4 cut(s)	26, 95, 899, 2124
BcgI	CGANNNNNNTGC	4 cut(s)	980, 1014, 1589, 1623
BciT130I	CCWGG	4 cut(s)	203, 427, 2231, 2422
BclI	TGATCA	1 cut(s)	1417
BcnI	CCSGG	1 cut(s)	1983
BcoDI	GTCTC	2 cut(s)	1571, 2210
BfaI	CTAG	2 cut(s)	1533, 2541
BfmI	CTRYAG	2 cut(s)	882, 1701
BfoI	RGCGCY	2 cut(s)	1227, 2080
BfuAI	ACCTGC	2 cut(s)	463, 2453
BisI	GCNGC	9 cut(s)	100, 159, 855, 875, 885, 1305, 1618, 1887, 2028
BlsI	GCNGC	9 cut(s)	101, 160, 856, 876, 886, 1306, 1619, 1888, 2029
BmcAI	AGTACT	1 cut(s)	1949
Bme1390I	CCNGG	5 cut(s)	203, 427, 1983, 2231, 2422
Bme18I	GGWCC	3 cut(s)	76, 1972, 2320
BmeT110I	CYCGRG	1 cut(s)	1901
BmgBI	CACGTC	3 cut(s)	2172, 2385, 2522
BmgT120I	GGNCC	4 cut(s)	16, 76, 1972, 2320
BmiI	GGNNCC	3 cut(s)	103, 1973, 1974
BmrFI	CCNGG	5 cut(s)	203, 427, 1983, 2231, 2422
BmrI	ACTGGG	3 cut(s)	1089, 1370, 2410
BmuI	ACTGGG	3 cut(s)	1089, 1370, 2410
BpiI	GAAGAC	1 cut(s)	566
BplI	GAGNNNNNCTC	2 cut(s)	2396, 2428
BpmI	CTGGAG	3 cut(s)	596, 1928, 2443
Bpu14I	TTCGAA	1 cut(s)	246
BpuEI	CTTGAG	3 cut(s)	257, 1331, 1431
BpuMI	CCSGG	1 cut(s)	1983
BsaAI	YACGTR	1 cut(s)	843
BsaBI	GATNNNNATC	1 cut(s)	552
BsaHI	GRCGYC	1 cut(s)	423
BsaJI	CCNNGG	5 cut(s)	213, 697, 813, 819, 915
BsaWI	WCCGGW	3 cut(s)	73, 415, 2429
Bsc4I	CCNNNNNNNGG	6 cut(s)	73, 1123, 1315, 1768, 1982, 2329
Bse118I	RCCGGY	3 cut(s)	179, 415, 526
Bse3DI	GCAATG	2 cut(s)	1793, 2010
Bse8I	GATNNNNATC	1 cut(s)	552
BseAI	TCCGGA	1 cut(s)	2429
BseBI	CCWGG	4 cut(s)	203, 427, 2231, 2422
BseDI	CCNNGG	5 cut(s)	213, 697, 813, 819, 915
BseGI	GGATG	5 cut(s)	454, 553, 1102, 1271, 1816
BseJI	GATNNNNATC	1 cut(s)	552
BseLI	CCNNNNNNNGG	6 cut(s)	73, 1123, 1315, 1768, 1982, 2329
BseMI	GCAATG	2 cut(s)	1793, 2010
BseMII	CTCAG	4 cut(s)	372, 1073, 1373, 2307
BseRI	GAGGAG	2 cut(s)	1328, 2028
BseSI	GKGCMC	2 cut(s)	765, 2646
BseXI	GCAGC	7 cut(s)	866, 886, 896, 1291, 1629, 1898, 2014
BseYI	CCCAGC	1 cut(s)	298
BsgI	GTGCAG	1 cut(s)	1938
BshFI	GGCC	4 cut(s)	18, 608, 818, 1938
BshTI	ACCGGT	1 cut(s)	415
BsiHKAI	GWGCWC	2 cut(s)	2409, 2646
BsiHKCI	CYCGRG	1 cut(s)	1901
BsiSI	CCGG	6 cut(s)	74, 180, 416, 527, 1983, 2430
BslFI	GGGAC	3 cut(s)	29, 1985, 2358
BslI	CCNNNNNNNGG	6 cut(s)	73, 1123, 1315, 1768, 1982, 2329
BsmAI	GTCTC	2 cut(s)	1571, 2210
BsmFI	GGGAC	3 cut(s)	29, 1985, 2358
BsmI	GAATGC	2 cut(s)	877, 1235
BsnI	GGCC	4 cut(s)	18, 608, 818, 1938
BsoBI	CYCGRG	1 cut(s)	1901
Bsp119I	TTCGAA	1 cut(s)	246
Bsp1286I	GDGCHC	3 cut(s)	765, 2409, 2646
Bsp13I	TCCGGA	1 cut(s)	2429
Bsp1407I	TGTACA	1 cut(s)	741
Bsp19I	CCATGG	1 cut(s)	819
BspACI	CCGC	6 cut(s)	99, 159, 430, 667, 2242, 2323
BspANI	GGCC	4 cut(s)	18, 608, 818, 1938
BspCNI	CTCAG	4 cut(s)	373, 1072, 1372, 2308
BspEI	TCCGGA	1 cut(s)	2429
BspLI	GGNNCC	3 cut(s)	103, 1973, 1974
BspMAI	CTGCAG	1 cut(s)	886
BspMI	ACCTGC	2 cut(s)	463, 2453
BspPI	GGATC	4 cut(s)	1327, 1647, 1920, 2267
BspT104I	TTCGAA	1 cut(s)	246
BsrDI	GCAATG	2 cut(s)	1793, 2010
BsrFI	RCCGGY	3 cut(s)	179, 415, 526
BsrGI	TGTACA	1 cut(s)	741
BssAI	RCCGGY	3 cut(s)	179, 415, 526
BssECI	CCNNGG	5 cut(s)	213, 697, 813, 819, 915
BssNI	GRCGYC	1 cut(s)	423
BssT1I	CCWWGG	3 cut(s)	213, 697, 819
Bst2UI	CCWGG	4 cut(s)	203, 427, 2231, 2422
Bst4CI	ACNGT	4 cut(s)	408, 565, 848, 1840
Bst6I	CTCTTC	3 cut(s)	214, 2155, 2202
BstACI	GRCGYC	1 cut(s)	423
BstAPI	GCANNNNNTGC	2 cut(s)	1883, 1892
BstAUI	TGTACA	1 cut(s)	741
BstBAI	YACGTR	1 cut(s)	843
BstBI	TTCGAA	1 cut(s)	246
BstC8I	GCNNGC	5 cut(s)	88, 1269, 1774, 1778, 1875
BstDEI	CTNAG	9 cut(s)	381, 1059, 1088, 1359, 1691, 2092, 2201, 2225, 2316
BstDSI	CCRYGG	2 cut(s)	819, 915
BstEII	GGTNACC	1 cut(s)	1370
BstENI	CCTNNNNNAGG	1 cut(s)	1313
BstF5I	GGATG	5 cut(s)	454, 553, 1102, 1271, 1816
BstH2I	RGCGCY	2 cut(s)	1227, 2080
BstHHI	GCGC	2 cut(s)	1226, 2079
BstMAI	GTCTC	2 cut(s)	1571, 2210
BstMWI	GCNNNNNNNGC	8 cut(s)	24, 96, 464, 1221, 1230, 1883, 1892, 2033
BstNI	CCWGG	4 cut(s)	203, 427, 2231, 2422
BstNSI	RCATGY	1 cut(s)	526
BstPI	GGTNACC	1 cut(s)	1370
BstSCI	CCNGG	5 cut(s)	201, 425, 1981, 2229, 2420
BstSFI	CTRYAG	2 cut(s)	882, 1701
BstSLI	GKGCMC	2 cut(s)	765, 2646
BstSNI	TACGTA	1 cut(s)	843
BstV1I	GCAGC	7 cut(s)	866, 886, 896, 1291, 1629, 1898, 2014
BstV2I	GAAGAC	1 cut(s)	566
BstX2I	RGATCY	2 cut(s)	1319, 1912
BstXI	CCANNNNNNTGG	2 cut(s)	944, 1126
BstYI	RGATCY	2 cut(s)	1319, 1912
BsuRI	GGCC	4 cut(s)	18, 608, 818, 1938
BtgI	CCRYGG	2 cut(s)	819, 915
BtrI	CACGTC	3 cut(s)	2172, 2385, 2522
BtsCI	GGATG	5 cut(s)	454, 553, 1102, 1271, 1816
BtsI	GCAGTG	2 cut(s)	81, 2145
BtsIMutI	CAGTG	5 cut(s)	81, 944, 1845, 2145, 2285
BveI	ACCTGC	2 cut(s)	463, 2453
Cac8I	GCNNGC	5 cut(s)	88, 1269, 1774, 1778, 1875
CaiI	CAGNNNCTG	1 cut(s)	1580
CfoI	GCGC	2 cut(s)	1226, 2079
Cfr10I	RCCGGY	3 cut(s)	179, 415, 526
Cfr13I	GGNCC	4 cut(s)	16, 76, 1972, 2320
CseI	GACGC	3 cut(s)	431, 1432, 2342
Csp6I	GTAC	8 cut(s)	363, 742, 844, 1077, 1502, 1898, 1948, 2570
CspAI	ACCGGT	1 cut(s)	415
CviQI	GTAC	8 cut(s)	363, 742, 844, 1077, 1502, 1898, 1948, 2570
DdeI	CTNAG	9 cut(s)	381, 1059, 1088, 1359, 1691, 2092, 2201, 2225, 2316
EaeI	YGGCCR	1 cut(s)	606
Eam1104I	CTCTTC	3 cut(s)	214, 2155, 2202
EarI	CTCTTC	3 cut(s)	214, 2155, 2202
Eco105I	TACGTA	1 cut(s)	843
Eco130I	CCWWGG	3 cut(s)	213, 697, 819
Eco32I	GATATC	1 cut(s)	124
Eco47I	GGWCC	3 cut(s)	76, 1972, 2320
Eco57I	CTGAAG	2 cut(s)	578, 2411
Eco88I	CYCGRG	1 cut(s)	1901
Eco91I	GGTNACC	1 cut(s)	1370
EcoNI	CCTNNNNNAGG	1 cut(s)	1313
EcoO109I	RGGNCCY	1 cut(s)	1972
EcoO65I	GGTNACC	1 cut(s)	1370
EcoRI	GAATTC	1 cut(s)	1348
EcoRII	CCWGG	4 cut(s)	201, 425, 2229, 2420
EcoRV	GATATC	1 cut(s)	124
EcoT14I	CCWWGG	3 cut(s)	213, 697, 819
EcoT22I	ATGCAT	1 cut(s)	1612
ErhI	CCWWGG	3 cut(s)	213, 697, 819
FaqI	GGGAC	3 cut(s)	29, 1985, 2358
FauI	CCCGC	1 cut(s)	660
FauNDI	CATATG	1 cut(s)	367
FbaI	TGATCA	1 cut(s)	1417
FblI	GTMKAC	1 cut(s)	593
Fnu4HI	GCNGC	9 cut(s)	100, 159, 855, 875, 885, 1305, 1618, 1887, 2028
FokI	GGATG	5 cut(s)	461, 560, 1109, 1258, 1823
Fsp4HI	GCNGC	9 cut(s)	100, 159, 855, 875, 885, 1305, 1618, 1887, 2028
FspBI	CTAG	2 cut(s)	1533, 2541
GlaI	GCGC	2 cut(s)	1225, 2078
GluI	GCNGC	9 cut(s)	100, 159, 855, 875, 885, 1305, 1618, 1887, 2028
GsaI	CCCAGC	1 cut(s)	302
GsuI	CTGGAG	3 cut(s)	596, 1928, 2443
HaeII	RGCGCY	2 cut(s)	1227, 2080
HaeIII	GGCC	4 cut(s)	18, 608, 818, 1938
HapII	CCGG	6 cut(s)	74, 180, 416, 527, 1983, 2430
HgaI	GACGC	3 cut(s)	431, 1432, 2342
HhaI	GCGC	2 cut(s)	1226, 2079
Hin1I	GRCGYC	1 cut(s)	423
Hin6I	GCGC	2 cut(s)	1224, 2077
HinP1I	GCGC	2 cut(s)	1224, 2077
HincII	GTYRAC	2 cut(s)	175, 421
HindII	GTYRAC	2 cut(s)	175, 421
HindIII	AAGCTT	1 cut(s)	1961
HpaI	GTTAAC	1 cut(s)	175
HpaII	CCGG	6 cut(s)	74, 180, 416, 527, 1983, 2430
HphI	GGTGA	9 cut(s)	191, 573, 926, 1021, 1106, 1337, 1463, 1672, 2503
Hpy166II	GTNNAC	8 cut(s)	175, 421, 594, 972, 1328, 1336, 2209, 2644
Hpy8I	GTNNAC	8 cut(s)	175, 421, 594, 972, 1328, 1336, 2209, 2644
Hpy99I	CGWCG	3 cut(s)	110, 116, 131
HpyCH4III	ACNGT	4 cut(s)	408, 565, 848, 1840
HpyCH4IV	ACGT	4 cut(s)	842, 2171, 2384, 2521
HpyF10VI	GCNNNNNNNGC	8 cut(s)	24, 96, 464, 1221, 1230, 1883, 1892, 2033
HpyF3I	CTNAG	9 cut(s)	381, 1059, 1088, 1359, 1691, 2092, 2201, 2225, 2316
HpySE526I	ACGT	4 cut(s)	842, 2171, 2384, 2521
Hsp92I	GRCGYC	1 cut(s)	423
HspAI	GCGC	2 cut(s)	1224, 2077
KflI	GGGWCCC	1 cut(s)	1972
Kpn2I	TCCGGA	1 cut(s)	2429
Ksp22I	TGATCA	1 cut(s)	1417
KspAI	GTTAAC	1 cut(s)	175
LmnI	GCTCC	3 cut(s)	4, 107, 2404
Lsp1109I	GCAGC	7 cut(s)	866, 886, 896, 1291, 1629, 1898, 2014
MaeI	CTAG	2 cut(s)	1533, 2541
MaeII	ACGT	4 cut(s)	842, 2171, 2384, 2521
MaeIII	GTNAC	8 cut(s)	400, 508, 579, 838, 955, 1242, 1370, 2452
MfeI	CAATTG	2 cut(s)	2460, 2481
MflI	RGATCY	2 cut(s)	1319, 1912
MhlI	GDGCHC	3 cut(s)	765, 2409, 2646
MlsI	TGGCCA	1 cut(s)	608
MluNI	TGGCCA	1 cut(s)	608
MlyI	GAGTC	5 cut(s)	200, 587, 1051, 1351, 1999
MmeI	TCCRAC	4 cut(s)	543, 598, 915, 1788
Mox20I	TGGCCA	1 cut(s)	608
Mph1103I	ATGCAT	1 cut(s)	1612
MroI	TCCGGA	1 cut(s)	2429
MroXI	GAANNNNTTC	2 cut(s)	1233, 2196
MscI	TGGCCA	1 cut(s)	608
MseI	TTAA	3 cut(s)	174, 1920, 2249
MslI	CAYNNNNRTG	4 cut(s)	979, 1124, 1143, 1998
Msp20I	TGGCCA	1 cut(s)	608
MspA1I	CMGCKG	2 cut(s)	1620, 1889
MspI	CCGG	6 cut(s)	74, 180, 416, 527, 1983, 2430
MspR9I	CCNGG	5 cut(s)	203, 427, 1983, 2231, 2422
MunI	CAATTG	2 cut(s)	2460, 2481
Mva1269I	GAATGC	2 cut(s)	877, 1235
MvaI	CCWGG	4 cut(s)	203, 427, 2231, 2422
MwoI	GCNNNNNNNGC	8 cut(s)	24, 96, 464, 1221, 1230, 1883, 1892, 2033
NciI	CCSGG	1 cut(s)	1983
NcoI	CCATGG	1 cut(s)	819
NdeI	CATATG	1 cut(s)	367
NlaIV	GGNNCC	3 cut(s)	103, 1973, 1974
NmeAIII	GCCGAG	2 cut(s)	838, 1200
NmuCI	GTSAC	3 cut(s)	579, 1242, 2452
NsiI	ATGCAT	1 cut(s)	1612
NspI	RCATGY	1 cut(s)	526
NspV	TTCGAA	1 cut(s)	246
OliI	CACNNNNGTG	1 cut(s)	979
PcsI	WCGNNNNNNNCGW	1 cut(s)	102
PctI	GAATGC	2 cut(s)	877, 1235
PdmI	GAANNNNTTC	2 cut(s)	1233, 2196
PfeI	GAWTC	5 cut(s)	141, 327, 1109, 1751, 2192
PinAI	ACCGGT	1 cut(s)	415
PkrI	GCNGC	9 cut(s)	101, 160, 856, 876, 886, 1306, 1619, 1888, 2029
PleI	GAGTC	5 cut(s)	200, 586, 1051, 1351, 1998
PpsI	GAGTC	5 cut(s)	200, 586, 1051, 1351, 1998
Ppu21I	YACGTR	1 cut(s)	843
PpuMI	RGGWCCY	1 cut(s)	1972
PshBI	ATTAAT	1 cut(s)	1920
Psp5II	RGGWCCY	1 cut(s)	1972
Psp6I	CCWGG	4 cut(s)	201, 425, 2229, 2420
PspEI	GGTNACC	1 cut(s)	1370
PspFI	CCCAGC	1 cut(s)	298
PspGI	CCWGG	4 cut(s)	201, 425, 2229, 2420
PspN4I	GGNNCC	3 cut(s)	103, 1973, 1974
PspPI	GGNCC	4 cut(s)	16, 76, 1972, 2320
PspPPI	RGGWCCY	1 cut(s)	1972
PstI	CTGCAG	1 cut(s)	886
PstNI	CAGNNNCTG	1 cut(s)	1580
PsuI	RGATCY	2 cut(s)	1319, 1912
PvuII	CAGCTG	2 cut(s)	1620, 1889
RsaI	GTAC	8 cut(s)	364, 743, 845, 1078, 1503, 1899, 1949, 2571
RsaNI	GTAC	8 cut(s)	363, 742, 844, 1077, 1502, 1898, 1948, 2570
RseI	CAYNNNNRTG	4 cut(s)	979, 1124, 1143, 1998
SaqAI	TTAA	3 cut(s)	174, 1920, 2249
SatI	GCNGC	9 cut(s)	100, 159, 855, 875, 885, 1305, 1618, 1887, 2028
Sau96I	GGNCC	4 cut(s)	16, 76, 1972, 2320
ScaI	AGTACT	1 cut(s)	1949
SchI	GAGTC	5 cut(s)	200, 587, 1051, 1351, 1999
ScrFI	CCNGG	5 cut(s)	203, 427, 1983, 2231, 2422
SduI	GDGCHC	3 cut(s)	765, 2409, 2646
SfcI	CTRYAG	2 cut(s)	882, 1701
SfuI	TTCGAA	1 cut(s)	246
SinI	GGWCC	3 cut(s)	76, 1972, 2320
SmiMI	CAYNNNNRTG	4 cut(s)	979, 1124, 1143, 1998
SmlI	CTYRAG	3 cut(s)	236, 1310, 1446
SmoI	CTYRAG	3 cut(s)	236, 1310, 1446
SnaBI	TACGTA	1 cut(s)	843
SsiI	CCGC	6 cut(s)	99, 159, 430, 667, 2242, 2323
SspI	AATATT	1 cut(s)	1161
SspMI	CTAG	2 cut(s)	1533, 2541
StyD4I	CCNGG	5 cut(s)	201, 425, 1981, 2229, 2420
StyI	CCWWGG	3 cut(s)	213, 697, 819
TaaI	ACNGT	4 cut(s)	408, 565, 848, 1840
TaiI	ACGT	4 cut(s)	845, 2174, 2387, 2524
TaqI	TCGA	6 cut(s)	114, 120, 246, 1122, 2414, 2562
TatI	WGTACW	4 cut(s)	362, 741, 1076, 1947
TauI	GCSGC	2 cut(s)	102, 161
TfiI	GAWTC	5 cut(s)	141, 327, 1109, 1751, 2192
Tru1I	TTAA	3 cut(s)	174, 1920, 2249
Tru9I	TTAA	3 cut(s)	174, 1920, 2249
TscAI	CASTG	5 cut(s)	88, 944, 1845, 2145, 2292
TseFI	GTSAC	3 cut(s)	579, 1242, 2452
TseI	GCWGC	7 cut(s)	854, 874, 884, 1304, 1617, 1886, 2027
Tsp45I	GTSAC	3 cut(s)	579, 1242, 2452
TspGWI	ACGGA	3 cut(s)	94, 486, 2460
TspRI	CASTG	5 cut(s)	88, 944, 1845, 2145, 2292
VneI	GTGCAC	1 cut(s)	2642
VpaK11BI	GGWCC	3 cut(s)	76, 1972, 2320
VspI	ATTAAT	1 cut(s)	1920
XagI	CCTNNNNNAGG	1 cut(s)	1313
XapI	RAATTY	6 cut(s)	92, 704, 1348, 1553, 1849, 2019
XbaI	TCTAGA	1 cut(s)	1532
XceI	RCATGY	1 cut(s)	526
XcmI	CCANNNNNNNNNTGG	1 cut(s)	784
XmiI	GTMKAC	1 cut(s)	593
XmnI	GAANNNNTTC	2 cut(s)	1233, 2196
XspI	CTAG	2 cut(s)	1533, 2541
ZrmI	AGTACT	1 cut(s)	1949
Zsp2I	ATGCAT	1 cut(s)	1612

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.