Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2D

Orthogroup ID

OG0000648

Physical Location & Seq

Genomic Coordinates Reverse (-)

66429395 .. 66433203

Gene Structure 3809 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2DG459900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1869 bp

ATGGAACAGAAGCAAGGCATAGAGCAATTTAAAGGCCAAGCAAGGTTACCGAATTTTGCAATCCCGAAACGCTATGATCTTCATCTCAAACTTGATCTCTCTGCCTGCACCTTCTCCGGCACCGTGCAGATTAACGTTAGCATCGTTGAAGAGACCAAGTTTCTTGTCTTGAACGCTCTTGAACTTGATGTTCATCAAGTTTGGTTCACCAACTCTCACGGCCAAAAGTACCACCCCTGCGATGTTGTTTTGAATGGAGATGATGAAGTTCTTGTTTTGGTATTTGATAAAGCACTTGGTATTGGTGAGGGAGTCTTGGGGGTTGACTTTTCTGCAGTCCTTAATGCGCACTTGGTGGGGTTATATAAATGTGCTTATATGGATGGGGAAGAGAAAAAGAATATGGCTGTTACTCAATTCGAAGCTGTGGATGCGAGGAGGTTCTTTCCATGTTGGGATGAACCTGCTCTCAAGGCTAGATTCAAGATAGCATTAGATGTACCATCAGAGCTGACAGCTTTGTCCAATATGCCTATTATTAATGAGAAGTGTGATGGAGATGTTAAGACTGTGTCTTTTGAGGAATCTCCAATCATGTCAACTTATTTGGTGGCTGTTGTTGTTGGCCTATTTGATCATATTGAAGATACAACATCTGATGGGGTAAAGGTTCGTGCATATTGCCCTGTTGGGAAGAGTGATAAAGGGGAATTTGCGTTAAATGTTGCTGTTAAGACCCTTGATCTTTTCTCCAAATACTTCTCAACGCCTTACTCACTCCCCAAACTTGATATGGTTGCGGTTCCTGAATTTTCCGGTGGGGCCATGGAGAATTATGGTTTGATCACATACCGTGAAACTGAACTGCTTTTTGATCCTTTGCATTCCACAGCAGCAAGAAAGCAAAGAATGGCAATTGTTGTATCACATGAAGTAGCACATCAGTGGTTTGGCAATCTGGTAACAATGGAATGGTGGACTGATTTATGGCTTAACGAGGGTTTTGCAACATGGATAAGTTATATGGCCACTGATATTTTGTTTCCTGAGTGGAAAGTTTGGTCTCAATTTCTTCAATATACTACTGGTGGCCTAATTATGGATGCCCTGGAACAATCACATCCAATTCAGGTAGAGGTACACCACGCACGTTCAGTTCTTGAAATATTCGATGCTATCAGTTATGAAAAGGGATCTGCTGTTATACGAATGCTGCAGGCTTATCTTGGTGATGATATATTCCAGAAATCGTTAAGTTCCTACATAAAAAGATATTCTGAAAAAAATGCAAAGACAGAAGATTTATGGAGTGTTCTGTCGGAGGAATCTGGTCTCAAAATCAGTGAAATGATGGATGATTGGACTAAGAAACAAGGATATCCTGTGATCTCTGTAACAGCAAAGGTTCATATTTTGGAATTTGAGCAGACACAGTTTCTGTCAGCAGATCTTGTTGACACTTCTGATACTAATTTAAAGAATAAAGAGACATGTGATGAACAACTGTGGGTCAAGGTTAATATCGAGCAGAGTGGTTTTTATAGGGTAAAATATGAAGATAAGCTAGCAGCTCGACTTAGGAAGGCTATTGAGCATAATAGCTTGGAAGCAACAGACAAATTTGGTATTCTGGATGATGCATACGCCCTTTGCGAAGCTTGTGAACAGTCACTATCATCTTTGCTTTCCTTGATGGATGTATACAGAAAAGAAGCTGATTATATTGTCTTATCAAAACTTATAGACGTATGTTATAACATTGTTAAAGTATCAAGCGAGGCCATCCCTGATTCAGTGAATGAGTTGAAGCAATTTTGCATCAAATCTCCTCATGTTTCCATCAGAGTAAGCAGTATTATGCTAAGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001666 GO:0003674 GO:0003824 GO:0004177 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006508 GO:0006518 GO:0006807 GO:0006950 GO:0008150 GO:0008152 GO:0008233 GO:0008235 GO:0008237 GO:0008238 GO:0008270 GO:0009056 GO:0009628 GO:0009987 GO:0016787 GO:0019538 GO:0033218 GO:0033554 GO:0034641 GO:0036293 GO:0036294 GO:0042221 GO:0042277 GO:0043167 GO:0043169 GO:0043170 GO:0043171 GO:0043603 GO:0044237 GO:0044238 GO:0044248 GO:0044424 GO:0044444 GO:0044464 GO:0046872 GO:0046914 GO:0050896 GO:0051716 GO:0070006 GO:0070011 GO:0070482 GO:0070887 GO:0071453 GO:0071456 GO:0071704 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ERAP1_C Peptidase_M1

Protein Analysis

622

Amino Acids

70.39

Weight (kDa)

5.01

Isoelectric Point (pI)

36.87

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Peptidase_M1_N	PF17900	22 - 203	1.2e-48	Peptidase M1 N-terminal domain
Peptidase_M1	PF01433	238 - 454	2.5e-84	Peptidase family M1 domain
ERAP1_C	PF11838	503 - 606	5.8e-21	ERAP1-like C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000648)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G33090
fragaria_vesca	FvH4_2g31431 FvH4_2g31440 FvH4_6g34250 FvH4_6g34262 FvH4_6g34263
malus_domestica	MD08G1066400.v1.1 MD08G1066500.v1.1 MD08G1067400.v1.1 MD09G1070300.v1.1 MD09G1187200.v1.1 MD10G1090900.v1.1 MD15G1054400.v1.1 MD17G1171400.v1.1
prunus_persica	Prupe.1G407900_v2.0.a1 Prupe.1G408000_v2.0.a1 Prupe.1G408000_v2.0.a1 Prupe.1G408000_v2.0.a1 Prupe.1G457300_v2.0.a1 Prupe.3G044500_v2.0.a1 Prupe.3G044500_v2.0.a1
pyrus_communis	pycom08g05520 pycom08g05550 pycom08g05560 pycom08g05590 pycom09g10370 pycom09g10380 pycom10g07440 pycom10g07460 pycom15g05130 pycom15g05150 pycom17g16900
rosa_chinensis	RchiOBHm_Chr2g0144571 RchiOBHm_Chr2g0144611 RchiOBHm_Chr4g0390591 RchiOBHm_Chr6g0311371 RchiOBHm_Chr6g0311381
rosa_laevigata	RLG00000009010 RLG00000009289 RLG00000010411 RLG00000010412 RLG00000020090 RLG00000020092 RLG00000036974
rosa_multiflora	Rmu_co8212940.1_g000001 Rmu_sc0005789.1_g000001 Rmu_sc0008536.1_g000010 Rmu_sc0008536.1_g000011 Rmu_sc0009300.1_g000002
rosa_roxburghii	Rroxscaffold_1G00056400 Rroxscaffold_2G00084720 Rroxscaffold_2G00101200 Rroxscaffold_7G00157670 Rroxscaffold_7G00157680
rosa_rugosa	Rorug02G0387900 Rorug02G0388000 Rorug02G0388100 Rorug06G0388300 Rorug06G0388400
rosa_samantha	Rh2AG440000 Rh2AG440100 Rh2BG450000 Rh2BG450300 Rh2BG450500 Rh2CG427000 Rh2CG427200 Rh2DG459900 Rh2DG460300 Rh2DG460500 Rh6AG502600 Rh6AG502700 Rh6BG513300 Rh6CG519100 Rh6CG519200
rosa_wichuraiana	Rw2G036000 Rw6G043770 Rw6G043780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1755
AasI	GACNNNNNNGTC	1 cut(s)	520
Acc16I	TGCGCA	1 cut(s)	348
Acc36I	ACCTGC	1 cut(s)	472
AccB1I	GGYRCC	1 cut(s)	119
AccI	GTMKAC	1 cut(s)	1701
AciI	CCGC	1 cut(s)	800
AclI	AACGTT	1 cut(s)	135
AclWI	GGATC	2 cut(s)	869, 1201
AcoI	YGGCCR	2 cut(s)	220, 1026
AcsI	RAATTY	5 cut(s)	52, 710, 809, 1418, 1619
AdeI	CACNNNGTG	1 cut(s)	355
AfaI	GTAC	3 cut(s)	230, 501, 1140
AfiI	CCNNNNNNNGG	1 cut(s)	1099
AflIII	ACRYGT	1 cut(s)	1490
AgsI	TTSAA	9 cut(s)	149, 172, 182, 253, 484, 644, 1076, 1163, 1807
AjnI	CCWGG	1 cut(s)	1107
AleI	CACNNNNGTG	1 cut(s)	943
AluBI	AGCT	8 cut(s)	425, 511, 518, 1564, 1571, 1602, 1658, 1715
AluI	AGCT	8 cut(s)	425, 511, 518, 1564, 1571, 1602, 1658, 1715
Alw26I	GTCTC	4 cut(s)	146, 1068, 1337, 1481
AlwI	GGATC	2 cut(s)	869, 1201
AlwNI	CAGNNNCTG	1 cut(s)	1438
AoxI	GGCC	7 cut(s)	34, 220, 625, 822, 1026, 1090, 1779
ApeKI	GCWGC	3 cut(s)	893, 1213, 1568
ApoI	RAATTY	5 cut(s)	52, 710, 809, 1418, 1619
AseI	ATTAAT	1 cut(s)	540
AspLEI	GCGC	1 cut(s)	349
AspS9I	GGNCC	1 cut(s)	822
AsuHPI	GGTGA	3 cut(s)	199, 317, 1241
AsuII	TTCGAA	1 cut(s)	420
AsuNHI	GCTAGC	1 cut(s)	1564
BalI	TGGCCA	1 cut(s)	1028
BanI	GGYRCC	1 cut(s)	119
BbvI	GCAGC	3 cut(s)	905, 1200, 1580
BccI	CCATC	8 cut(s)	377, 511, 548, 653, 1345, 1687, 1790, 1847
BceAI	ACGGC	1 cut(s)	235
BcgI	CGANNNNNNTGC	2 cut(s)	986, 1020
BciT130I	CCWGG	1 cut(s)	1109
BclI	TGATCA	2 cut(s)	634, 843
BcoDI	GTCTC	4 cut(s)	146, 1068, 1337, 1481
BfaI	CTAG	2 cut(s)	477, 1565
BfmI	CTRYAG	2 cut(s)	333, 1214
BfuAI	ACCTGC	1 cut(s)	472
BglII	AGATCT	1 cut(s)	1447
BisI	GCNGC	3 cut(s)	894, 1214, 1569
BlsI	GCNGC	3 cut(s)	895, 1215, 1570
Bme1390I	CCNGG	1 cut(s)	1109
BmgT120I	GGNCC	1 cut(s)	822
BmiI	GGNNCC	3 cut(s)	121, 804, 823
BmrFI	CCNGG	1 cut(s)	1109
BmsI	GCATC	6 cut(s)	150, 421, 1093, 1162, 1627, 1827
BmtI	GCTAGC	1 cut(s)	1568
Bpu10I	CCTNAGC	1 cut(s)	1862
Bpu14I	TTCGAA	1 cut(s)	420
BpuEI	CTTGAG	1 cut(s)	455
BsaBI	GATNNNNATC	2 cut(s)	81, 192
BsaI	GGTCTC	3 cut(s)	146, 1068, 1337
BsaJI	CCNNGG	2 cut(s)	825, 1107
BsaWI	WCCGGW	1 cut(s)	815
Bsc4I	CCNNNNNNNGG	1 cut(s)	1099
Bse1I	ACTGG	1 cut(s)	1090
Bse8I	GATNNNNATC	2 cut(s)	81, 192
BseBI	CCWGG	1 cut(s)	1109
BseDI	CCNNGG	2 cut(s)	825, 1107
BseGI	GGATG	9 cut(s)	388, 436, 463, 1108, 1120, 1360, 1639, 1702, 1782
BseJI	GATNNNNATC	2 cut(s)	81, 192
BseLI	CCNNNNNNNGG	1 cut(s)	1099
BseMII	CTCAG	1 cut(s)	1038
BseNI	ACTGG	1 cut(s)	1090
BseRI	GAGGAG	2 cut(s)	451, 1818
BseXI	GCAGC	3 cut(s)	905, 1200, 1580
BsgI	GTGCAG	2 cut(s)	91, 146
BshFI	GGCC	7 cut(s)	36, 222, 627, 824, 1028, 1092, 1781
BshNI	GGYRCC	1 cut(s)	119
BsiSI	CCGG	2 cut(s)	117, 816
BslI	CCNNNNNNNGG	1 cut(s)	1099
BsmAI	GTCTC	4 cut(s)	146, 1068, 1337, 1481
BsmI	GAATGC	2 cut(s)	883, 1215
BsnI	GGCC	7 cut(s)	36, 222, 627, 824, 1028, 1092, 1781
Bso31I	GGTCTC	3 cut(s)	146, 1068, 1337
Bsp119I	TTCGAA	1 cut(s)	420
Bsp143I	GATC	9 cut(s)	76, 94, 634, 742, 843, 874, 1193, 1386, 1447
Bsp19I	CCATGG	1 cut(s)	825
BspACI	CCGC	1 cut(s)	800
BspANI	GGCC	7 cut(s)	36, 222, 627, 824, 1028, 1092, 1781
BspCNI	CTCAG	1 cut(s)	1039
BspLI	GGNNCC	3 cut(s)	121, 804, 823
BspMAI	CTGCAG	2 cut(s)	337, 1218
BspMI	ACCTGC	1 cut(s)	472
BspOI	GCTAGC	1 cut(s)	1568
BspPI	GGATC	2 cut(s)	869, 1201
BspT104I	TTCGAA	1 cut(s)	420
BspT107I	GGYRCC	1 cut(s)	119
BspTNI	GGTCTC	3 cut(s)	146, 1068, 1337
BsrI	ACTGG	1 cut(s)	1090
BssECI	CCNNGG	2 cut(s)	825, 1107
BssMI	GATC	9 cut(s)	76, 94, 634, 742, 843, 874, 1193, 1386, 1447
BssNAI	GTATAC	1 cut(s)	1702
BssT1I	CCWWGG	1 cut(s)	825
Bst1107I	GTATAC	1 cut(s)	1702
Bst2UI	CCWGG	1 cut(s)	1109
Bst4CI	ACNGT	6 cut(s)	124, 571, 854, 1434, 1506, 1668
Bst6I	CTCTTC	3 cut(s)	144, 384, 689
BstBI	TTCGAA	1 cut(s)	420
BstC8I	GCNNGC	3 cut(s)	106, 1218, 1566
BstDEI	CTNAG	4 cut(s)	1047, 1365, 1577, 1862
BstDSI	CCRYGG	1 cut(s)	825
BstEII	GGTNACC	1 cut(s)	45
BstF5I	GGATG	9 cut(s)	388, 436, 463, 1108, 1120, 1360, 1639, 1702, 1782
BstHHI	GCGC	1 cut(s)	349
BstKTI	GATC	9 cut(s)	79, 97, 637, 745, 846, 877, 1196, 1389, 1450
BstMAI	GTCTC	4 cut(s)	146, 1068, 1337, 1481
BstMBI	GATC	9 cut(s)	76, 94, 634, 742, 843, 874, 1193, 1386, 1447
BstMWI	GCNNNNNNNGC	2 cut(s)	431, 473
BstNI	CCWGG	1 cut(s)	1109
BstNSI	RCATGY	1 cut(s)	1494
BstPI	GGTNACC	1 cut(s)	45
BstSCI	CCNGG	1 cut(s)	1107
BstSFI	CTRYAG	2 cut(s)	333, 1214
BstV1I	GCAGC	3 cut(s)	905, 1200, 1580
BstX2I	RGATCY	2 cut(s)	1193, 1447
BstYI	RGATCY	2 cut(s)	1193, 1447
BstZ17I	GTATAC	1 cut(s)	1702
BsuRI	GGCC	7 cut(s)	36, 222, 627, 824, 1028, 1092, 1781
BtgI	CCRYGG	1 cut(s)	825
BtgZI	GCGATG	1 cut(s)	255
BtsCI	GGATG	9 cut(s)	388, 436, 463, 1108, 1120, 1360, 1639, 1702, 1782
BtsIMutI	CAGTG	4 cut(s)	950, 1029, 1348, 1800
BveI	ACCTGC	1 cut(s)	472
Cac8I	GCNNGC	3 cut(s)	106, 1218, 1566
CaiI	CAGNNNCTG	1 cut(s)	1438
CfoI	GCGC	1 cut(s)	349
Cfr13I	GGNCC	1 cut(s)	822
Csp6I	GTAC	3 cut(s)	229, 500, 1139
CviAII	CATG	7 cut(s)	450, 595, 826, 929, 1011, 1491, 1832
CviQI	GTAC	3 cut(s)	229, 500, 1139
DdeI	CTNAG	4 cut(s)	1047, 1365, 1577, 1862
DpnI	GATC	9 cut(s)	78, 96, 636, 744, 845, 876, 1195, 1388, 1449
DpnII	GATC	9 cut(s)	76, 94, 634, 742, 843, 874, 1193, 1386, 1447
DraI	TTTAAA	2 cut(s)	31, 1476
DraIII	CACNNNGTG	1 cut(s)	355
DrdI	GACNNNNNNGTC	1 cut(s)	520
DseDI	GACNNNNNNGTC	1 cut(s)	520
EaeI	YGGCCR	2 cut(s)	220, 1026
Eam1104I	CTCTTC	3 cut(s)	144, 384, 689
EarI	CTCTTC	3 cut(s)	144, 384, 689
Eco130I	CCWWGG	1 cut(s)	825
Eco31I	GGTCTC	3 cut(s)	146, 1068, 1337
Eco32I	GATATC	1 cut(s)	1379
Eco91I	GGTNACC	1 cut(s)	45
EcoO65I	GGTNACC	1 cut(s)	45
EcoRII	CCWGG	1 cut(s)	1107
EcoRV	GATATC	1 cut(s)	1379
EcoT14I	CCWWGG	1 cut(s)	825
EcoT22I	ATGCAT	1 cut(s)	1642
ErhI	CCWWGG	1 cut(s)	825
FaeI	CATG	7 cut(s)	453, 598, 829, 932, 1014, 1494, 1835
FatI	CATG	7 cut(s)	449, 594, 825, 928, 1010, 1490, 1831
FbaI	TGATCA	2 cut(s)	634, 843
FblI	GTMKAC	1 cut(s)	1701
Fnu4HI	GCNGC	3 cut(s)	894, 1214, 1569
FokI	GGATG	9 cut(s)	395, 443, 470, 1107, 1115, 1367, 1646, 1709, 1769
Fsp4HI	GCNGC	3 cut(s)	894, 1214, 1569
FspAI	RTGCGCAY	1 cut(s)	348
FspBI	CTAG	2 cut(s)	477, 1565
FspI	TGCGCA	1 cut(s)	348
GlaI	GCGC	1 cut(s)	348
GluI	GCNGC	3 cut(s)	894, 1214, 1569
HaeIII	GGCC	7 cut(s)	36, 222, 627, 824, 1028, 1092, 1781
HapII	CCGG	2 cut(s)	117, 816
HhaI	GCGC	1 cut(s)	349
Hin1II	CATG	7 cut(s)	453, 598, 829, 932, 1014, 1494, 1835
Hin6I	GCGC	1 cut(s)	347
HinP1I	GCGC	1 cut(s)	347
HincII	GTYRAC	3 cut(s)	325, 600, 1456
HindII	GTYRAC	3 cut(s)	325, 600, 1456
HindIII	AAGCTT	1 cut(s)	1656
HinfI	GANTC	5 cut(s)	312, 480, 584, 1325, 1790
HpaII	CCGG	2 cut(s)	117, 816
HphI	GGTGA	3 cut(s)	199, 317, 1241
Hpy166II	GTNNAC	8 cut(s)	207, 325, 600, 978, 1141, 1456, 1664, 1702
Hpy188I	TCNGA	6 cut(s)	508, 658, 1279, 1321, 1465, 1844
Hpy188III	TCNNGA	9 cut(s)	64, 169, 179, 484, 806, 1046, 1160, 1243, 1631
Hpy8I	GTNNAC	8 cut(s)	207, 325, 600, 978, 1141, 1456, 1664, 1702
HpyAV	CCTTC	2 cut(s)	121, 1576
HpyCH4III	ACNGT	6 cut(s)	124, 571, 854, 1434, 1506, 1668
HpyCH4IV	ACGT	3 cut(s)	135, 1150, 1746
HpyF10VI	GCNNNNNNNGC	2 cut(s)	431, 473
HpyF3I	CTNAG	4 cut(s)	1047, 1365, 1577, 1862
HpySE526I	ACGT	3 cut(s)	135, 1150, 1746
Hsp92II	CATG	7 cut(s)	453, 598, 829, 932, 1014, 1494, 1835
HspAI	GCGC	1 cut(s)	347
Ksp22I	TGATCA	2 cut(s)	634, 843
Kzo9I	GATC	9 cut(s)	76, 94, 634, 742, 843, 874, 1193, 1386, 1447
Lsp1109I	GCAGC	3 cut(s)	905, 1200, 1580
LweI	GCATC	6 cut(s)	150, 421, 1093, 1162, 1627, 1827
MaeI	CTAG	2 cut(s)	477, 1565
MaeII	ACGT	3 cut(s)	135, 1150, 1746
MaeIII	GTNAC	5 cut(s)	45, 409, 961, 1393, 1668
MalI	GATC	9 cut(s)	78, 96, 636, 744, 845, 876, 1195, 1388, 1449
MboI	GATC	9 cut(s)	76, 94, 634, 742, 843, 874, 1193, 1386, 1447
MboII	GAAGA	8 cut(s)	71, 161, 401, 656, 706, 1064, 1310, 1568
MfeI	CAATTG	1 cut(s)	915
MflI	RGATCY	2 cut(s)	1193, 1447
MlsI	TGGCCA	1 cut(s)	1028
MluNI	TGGCCA	1 cut(s)	1028
MlyI	GAGTC	1 cut(s)	321
MmeI	TCCRAC	1 cut(s)	1299
MnlI	CCTC	9 cut(s)	301, 429, 432, 574, 991, 1129, 1315, 1771, 1839
Mox20I	TGGCCA	1 cut(s)	1028
Mph1103I	ATGCAT	1 cut(s)	1642
MscI	TGGCCA	1 cut(s)	1028
MslI	CAYNNNNRTG	1 cut(s)	943
Msp20I	TGGCCA	1 cut(s)	1028
MspI	CCGG	2 cut(s)	117, 816
MspR9I	CCNGG	1 cut(s)	1109
MunI	CAATTG	1 cut(s)	915
Mva1269I	GAATGC	2 cut(s)	883, 1215
MvaI	CCWGG	1 cut(s)	1109
MwoI	GCNNNNNNNGC	2 cut(s)	431, 473
NcoI	CCATGG	1 cut(s)	825
NdeII	GATC	9 cut(s)	76, 94, 634, 742, 843, 874, 1193, 1386, 1447
NheI	GCTAGC	1 cut(s)	1564
NlaIII	CATG	7 cut(s)	453, 598, 829, 932, 1014, 1494, 1835
NlaIV	GGNNCC	3 cut(s)	121, 804, 823
NmuCI	GTSAC	1 cut(s)	1668
NsbI	TGCGCA	1 cut(s)	348
NsiI	ATGCAT	1 cut(s)	1642
NspI	RCATGY	1 cut(s)	1494
NspV	TTCGAA	1 cut(s)	420
OliI	CACNNNNGTG	1 cut(s)	943
PciI	ACATGT	1 cut(s)	1490
PcsI	WCGNNNNNNNCGW	2 cut(s)	141, 1650
PctI	GAATGC	2 cut(s)	883, 1215
PfeI	GAWTC	4 cut(s)	480, 584, 1325, 1790
PflFI	GACNNNGTC	1 cut(s)	571
PkrI	GCNGC	3 cut(s)	895, 1215, 1570
PleI	GAGTC	1 cut(s)	320
PpsI	GAGTC	1 cut(s)	320
PscI	ACATGT	1 cut(s)	1490
PshBI	ATTAAT	1 cut(s)	540
PsiI	TTATAA	1 cut(s)	1755
Psp1406I	AACGTT	1 cut(s)	135
Psp6I	CCWGG	1 cut(s)	1107
PspEI	GGTNACC	1 cut(s)	45
PspGI	CCWGG	1 cut(s)	1107
PspN4I	GGNNCC	3 cut(s)	121, 804, 823
PspPI	GGNCC	1 cut(s)	822
PstI	CTGCAG	2 cut(s)	337, 1218
PstNI	CAGNNNCTG	1 cut(s)	1438
PsuI	RGATCY	2 cut(s)	1193, 1447
PsyI	GACNNNGTC	1 cut(s)	571
RsaI	GTAC	3 cut(s)	230, 501, 1140
RsaNI	GTAC	3 cut(s)	229, 500, 1139
RseI	CAYNNNNRTG	1 cut(s)	943
SatI	GCNGC	3 cut(s)	894, 1214, 1569
Sau3AI	GATC	9 cut(s)	76, 94, 634, 742, 843, 874, 1193, 1386, 1447
Sau96I	GGNCC	1 cut(s)	822
SchI	GAGTC	1 cut(s)	321
ScrFI	CCNGG	1 cut(s)	1109
SfaNI	GCATC	6 cut(s)	150, 421, 1093, 1162, 1627, 1827
SfcI	CTRYAG	2 cut(s)	333, 1214
SfuI	TTCGAA	1 cut(s)	420
SmiMI	CAYNNNNRTG	1 cut(s)	943
SmlI	CTYRAG	1 cut(s)	470
SmoI	CTYRAG	1 cut(s)	470
SsiI	CCGC	1 cut(s)	800
SspI	AATATT	1 cut(s)	1167
SspMI	CTAG	2 cut(s)	477, 1565
StyD4I	CCNGG	1 cut(s)	1107
StyI	CCWWGG	1 cut(s)	825
TaaI	ACNGT	6 cut(s)	124, 571, 854, 1434, 1506, 1668
TaiI	ACGT	3 cut(s)	138, 1153, 1749
TaqI	TCGA	4 cut(s)	420, 1170, 1524, 1573
TfiI	GAWTC	4 cut(s)	480, 584, 1325, 1790
TscAI	CASTG	4 cut(s)	950, 1036, 1348, 1800
TseFI	GTSAC	1 cut(s)	1668
TseI	GCWGC	3 cut(s)	893, 1213, 1568
Tsp45I	GTSAC	1 cut(s)	1668
TspDTI	ATGAA	9 cut(s)	71, 182, 279, 474, 945, 1200, 1397, 1512, 1569
TspRI	CASTG	4 cut(s)	950, 1036, 1348, 1800
Tth111I	GACNNNGTC	1 cut(s)	571
VspI	ATTAAT	1 cut(s)	540
XapI	RAATTY	5 cut(s)	52, 710, 809, 1418, 1619
XceI	RCATGY	1 cut(s)	1494
XcmI	CCANNNNNNNNNTGG	1 cut(s)	790
XmiI	GTMKAC	1 cut(s)	1701
XspI	CTAG	2 cut(s)	477, 1565
Zsp2I	ATGCAT	1 cut(s)	1642

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.