Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr09

Orthogroup ID

OG0000648

Physical Location & Seq

Genomic Coordinates Reverse (-)

4853891 .. 4857553

Gene Structure 3663 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD09G1070300.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1842 bp

ATGTTTAAGTTCTGCAGATACTTTGCTGTGCCATACCCGTTGCCCAAATTGGATATGGTTGCAATACCTGATTTTTCTTTCGCCGGCATGGAGAATTATGGTTTAGTTACATACCGAGAAATGGCTTTGCTTTTTGATGAAACAACATTCTGCAGTGCCAACAAGCAAAGGGTTACGATTACCGTGGCACATGAATTGGCACACCAGTGGTTTGGCAATCTTGTAACAAAGGAATGGTGGACGCATTTATGGCTGAATGAGGGATTTGCAACATGGGTATCACTTCATATCATTGTTATACTTGTGAGCTATTTAGCTACTGATAGCTTATTCCCAGAGTGGAAAATATGGACTCAGTTTCTTAATGAAGTCACTGCTGGTCTTAAGCTGGATGGGCTTGAAGAATCTCACCCCATTGAGAGGTCAATTGCTTCATATATCAAAAAGCATGCTTACTCAAATGCAAAGACAGAAGATTTGTGGGCTGCCCTTGAGGAGGGATCCGGTGAACCTGTAAACAAACTAATGAATTCATGGACACAGCAGAAGGGTTACCCGGTCATTTCTGTCAAAGTCAAAGATCAAAAGTTGGAGTTTAATCAGACACAATTCTACTCAAGCGGTTCCCAAGGCGATGGGCAATGGATTGTGCCGATTACATTATCCTGTGGCTCGTATGATGTGCGCAAGAATTTCCTACTACAAGCGAAGTCTGAAACTCTTGACATAAAGGAATTTCTGGGTTGCTCAGTAGGAAAGGCTGGATGTGGAGGCACAAGCAACAAAGACAATGCTTTATGCAGTTGGATAAAAGTCAATGTGGATCAGACTGGTTTTTACAGAGTGAAATATGAGGATGAACTTGCAGCTGCGCTTAGAAACGCTATCGAAGAGAAGCAATTGTCTGAAACTGACAGATTTGGCATTTTGGATGATTCCTTTGCCCTATCAATGGCTCGCAAGCAGTCTTTTGCTTCATTGCTTACCTTGTTGAGTGCATACAGAGAGGAACTTGAGTATATCGTGCTGTCAAATTTGATTGCTATAAGTTATAATCTGGCAAGAATTGCAGCCGATGCTGTACCCGGACTACTGGATCACATTAAACAATTCTTTATTGGACTTTTCCAGTATTCTGCAGAGAGGCTTGGTTGGCAGCCTAAACCGGGCGAAAGCCATTTAGATGCAATGTTGAGAGGAGAAATTTTGACTGCACTTGCTGTTTTTGGTCATGAACTGACGTTAGATGAAGCAAGTAGGCGTTTTCATGCCTTTATAGAAGACAGAAACACGCCCCTCCTTCCCCCAGACATTAGAAAGGCAGCATATGTGGCTGTAATGCAAAGAACAAGTGTATCTGACCGATCAGGCTATGAATCTCTTGTTAGAGTCTACAGAGAGAGTGATCTAAGCCAGGAGAAAACCCGCATTCTAGGTTCTTTAGCGTCTTGTCCCGATCCCAATATTACACTGGAAGTTCTCCACTTTATATTGACTCCTGAGGTTCGCAGTCAGGATGCTGTATTTGGACTCGCTGTTAGTAATGAAGGTCGGGAAACAGCATGGAAGTGGATGAAGGATAACTGGGAGCACATCTCAAAGACCTGGGGGTCTGGATTACTAATTCCTCGCTTTGTCAATGAAATTGTTTCACCGTTTGCTTCATTTGACAAGGTTAAGGAAGTAGATGAGTTCTTCAAAGCACATCCAAACCCGAAGATAACTAGAACAGTGAAGCAGAGCATTGAGCGGGTGCAAATCAACGCCAAATGGGTTCAGAGTGTTCAGAGCGAGAGAAACCTTGCCGATGTCGCGACGGAGTTGGCATACCGGAAATACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001666 GO:0003674 GO:0003824 GO:0004177 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0006508 GO:0006518 GO:0006807 GO:0006810 GO:0006950 GO:0008144 GO:0008150 GO:0008152 GO:0008233 GO:0008235 GO:0008237 GO:0008238 GO:0008270 GO:0009056 GO:0009628 GO:0009914 GO:0009926 GO:0009987 GO:0010013 GO:0010817 GO:0016020 GO:0016787 GO:0019538 GO:0031090 GO:0031406 GO:0033218 GO:0033293 GO:0033554 GO:0034641 GO:0036094 GO:0036293 GO:0036294 GO:0042221 GO:0042277 GO:0043167 GO:0043168 GO:0043169 GO:0043170 GO:0043171 GO:0043177 GO:0043226 GO:0043227 GO:0043603 GO:0044237 GO:0044238 GO:0044248 GO:0044422 GO:0044424 GO:0044444 GO:0044464 GO:0046872 GO:0046914 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0060918 GO:0065007 GO:0065008 GO:0070006 GO:0070011 GO:0070482 GO:0070887 GO:0071453 GO:0071456 GO:0071704 GO:0071944 GO:0097159 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko00480 ko01100 ko04614 ko04640 map00480 map01100 map04614 map04640

Pfam Domains

Protein Families

ERAP1_C Peptidase_M1

Protein Analysis

614

Amino Acids

69.65

Weight (kDa)

5.82

Isoelectric Point (pI)

34.26

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Peptidase_M1	PF01433	5 - 143	6e-47	Peptidase family M1 domain
Peptidase_M1	PF01433	141 - 179	1.2e-06	Peptidase family M1 domain
ERAP1_C	PF11838	269 - 586	1.8e-82	ERAP1-like C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0000648)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G33090
fragaria_vesca	FvH4_2g31431 FvH4_2g31440 FvH4_6g34250 FvH4_6g34262 FvH4_6g34263
malus_domestica	MD08G1066400.v1.1 MD08G1066500.v1.1 MD08G1067400.v1.1 MD09G1070300.v1.1 MD09G1187200.v1.1 MD10G1090900.v1.1 MD15G1054400.v1.1 MD17G1171400.v1.1
prunus_persica	Prupe.1G407900_v2.0.a1 Prupe.1G408000_v2.0.a1 Prupe.1G408000_v2.0.a1 Prupe.1G408000_v2.0.a1 Prupe.1G457300_v2.0.a1 Prupe.3G044500_v2.0.a1 Prupe.3G044500_v2.0.a1
pyrus_communis	pycom08g05520 pycom08g05550 pycom08g05560 pycom08g05590 pycom09g10370 pycom09g10380 pycom10g07440 pycom10g07460 pycom15g05130 pycom15g05150 pycom17g16900
rosa_chinensis	RchiOBHm_Chr2g0144571 RchiOBHm_Chr2g0144611 RchiOBHm_Chr4g0390591 RchiOBHm_Chr6g0311371 RchiOBHm_Chr6g0311381
rosa_laevigata	RLG00000009010 RLG00000009289 RLG00000010411 RLG00000010412 RLG00000020090 RLG00000020092 RLG00000036974
rosa_multiflora	Rmu_co8212940.1_g000001 Rmu_sc0005789.1_g000001 Rmu_sc0008536.1_g000010 Rmu_sc0008536.1_g000011 Rmu_sc0009300.1_g000002
rosa_roxburghii	Rroxscaffold_1G00056400 Rroxscaffold_2G00084720 Rroxscaffold_2G00101200 Rroxscaffold_7G00157670 Rroxscaffold_7G00157680
rosa_rugosa	Rorug02G0387900 Rorug02G0388000 Rorug02G0388100 Rorug06G0388300 Rorug06G0388400
rosa_samantha	Rh2AG440000 Rh2AG440100 Rh2BG450000 Rh2BG450300 Rh2BG450500 Rh2CG427000 Rh2CG427200 Rh2DG459900 Rh2DG460300 Rh2DG460500 Rh6AG502600 Rh6AG502700 Rh6BG513300 Rh6CG519100 Rh6CG519200
rosa_wichuraiana	Rw2G036000 Rw6G043770 Rw6G043780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1053
AasI	GACNNNNNNGTC	1 cut(s)	1609
Acc16I	TGCGCA	1 cut(s)	686
AccBSI	CCGCTC	1 cut(s)	1750
AccI	GTMKAC	1 cut(s)	1392
AccII	CGCG	1 cut(s)	1814
AciI	CCGC	3 cut(s)	621, 1426, 1750
AclWI	GGATC	5 cut(s)	495, 508, 831, 1104, 1451
AcsI	RAATTY	5 cut(s)	529, 691, 734, 1033, 1203
AfaI	GTAC	1 cut(s)	1083
AfiI	CCNNNNNNNGG	5 cut(s)	121, 420, 496, 952, 1166
AflII	CTTAAG	1 cut(s)	383
AgsI	TTSAA	2 cut(s)	401, 1699
AjnI	CCWGG	2 cut(s)	1413, 1604
AleI	CACNNNNGTG	1 cut(s)	205
AluBI	AGCT	5 cut(s)	309, 317, 327, 388, 869
AluI	AGCT	5 cut(s)	309, 317, 327, 388, 869
Alw21I	GWGCWC	1 cut(s)	1593
AlwI	GGATC	5 cut(s)	495, 508, 831, 1104, 1451
ApeKI	GCWGC	6 cut(s)	485, 866, 869, 1070, 1156, 1322
ApoI	RAATTY	5 cut(s)	529, 691, 734, 1033, 1203
ArsI	GACNNNNNNTTYG	2 cut(s)	460, 492
AspLEI	GCGC	2 cut(s)	687, 874
AsuC2I	CCSGG	3 cut(s)	557, 1086, 1167
AsuHPI	GGTGA	3 cut(s)	401, 518, 1644
AxyI	CCTNAGG	1 cut(s)	1500
BaeI	ACNNNNGTAYC	4 cut(s)	261, 294, 1338, 1371
BamHI	GGATCC	1 cut(s)	500
BbsI	GAAGAC	1 cut(s)	1287
Bbv12I	GWGCWC	1 cut(s)	1593
BbvI	GCAGC	6 cut(s)	472, 856, 878, 1082, 1168, 1334
BccI	CCATC	2 cut(s)	386, 629
BciT130I	CCWGG	2 cut(s)	1415, 1606
BcnI	CCSGG	3 cut(s)	557, 1086, 1167
BfaI	CTAG	3 cut(s)	1433, 1725, 1840
BfmI	CTRYAG	4 cut(s)	13, 151, 1137, 1393
BfrI	CTTAAG	1 cut(s)	383
BisI	GCNGC	6 cut(s)	486, 867, 870, 1071, 1157, 1323
BlsI	GCNGC	6 cut(s)	487, 868, 871, 1072, 1158, 1324
Bme1390I	CCNGG	5 cut(s)	557, 1086, 1167, 1415, 1606
BmiI	GGNNCC	2 cut(s)	502, 625
BmrFI	CCNGG	5 cut(s)	557, 1086, 1167, 1415, 1606
BmrI	ACTGGG	1 cut(s)	1594
BmsI	GCATC	3 cut(s)	1066, 1174, 1507
BmuI	ACTGGG	1 cut(s)	1594
BpiI	GAAGAC	1 cut(s)	1287
BplI	GAGNNNNNCTC	2 cut(s)	1580, 1612
BpuEI	CTTGAG	3 cut(s)	512, 601, 1034
BpuMI	CCSGG	3 cut(s)	557, 1086, 1167
BsaJI	CCNNGG	3 cut(s)	183, 628, 1605
BsaWI	WCCGGW	2 cut(s)	503, 1830
Bsc4I	CCNNNNNNNGG	5 cut(s)	121, 420, 496, 952, 1166
Bse118I	RCCGGY	1 cut(s)	83
Bse1I	ACTGG	6 cut(s)	205, 835, 1098, 1129, 1476, 1589
Bse21I	CCTNAGG	1 cut(s)	1500
Bse3DI	GCAATG	3 cut(s)	647, 977, 1194
BseBI	CCWGG	2 cut(s)	1415, 1606
BseDI	CCNNGG	3 cut(s)	183, 628, 1605
BseGI	GGATG	7 cut(s)	397, 770, 862, 937, 1522, 1578, 1705
BseLI	CCNNNNNNNGG	5 cut(s)	121, 420, 496, 952, 1166
BseMI	GCAATG	3 cut(s)	647, 977, 1194
BseMII	CTCAG	3 cut(s)	368, 762, 1491
BseNI	ACTGG	6 cut(s)	205, 835, 1098, 1129, 1476, 1589
BseRI	GAGGAG	2 cut(s)	509, 1212
BseXI	GCAGC	6 cut(s)	472, 856, 878, 1082, 1168, 1334
BsgI	GTGCAG	1 cut(s)	1197
Bsh1236I	CGCG	1 cut(s)	1814
BsiHKAI	GWGCWC	1 cut(s)	1593
BsiSI	CCGG	6 cut(s)	84, 504, 557, 1086, 1166, 1831
BslFI	GGGAC	1 cut(s)	1437
BslI	CCNNNNNNNGG	5 cut(s)	121, 420, 496, 952, 1166
BsmFI	GGGAC	1 cut(s)	1437
BsmI	GAATGC	1 cut(s)	1428
Bsp1286I	GDGCHC	1 cut(s)	1593
Bsp143I	GATC	7 cut(s)	500, 580, 823, 1096, 1364, 1405, 1456
Bsp68I	TCGCGA	1 cut(s)	1814
BspACI	CCGC	3 cut(s)	621, 1426, 1750
BspCNI	CTCAG	3 cut(s)	367, 761, 1492
BspFNI	CGCG	1 cut(s)	1814
BspHI	TCATGA	1 cut(s)	1231
BspLI	GGNNCC	2 cut(s)	502, 625
BspMAI	CTGCAG	3 cut(s)	17, 155, 1141
BspPI	GGATC	5 cut(s)	495, 508, 831, 1104, 1451
BspTI	CTTAAG	1 cut(s)	383
BsrBI	CCGCTC	1 cut(s)	1750
BsrDI	GCAATG	3 cut(s)	647, 977, 1194
BsrFI	RCCGGY	1 cut(s)	83
BsrI	ACTGG	6 cut(s)	205, 835, 1098, 1129, 1476, 1589
BssAI	RCCGGY	1 cut(s)	83
BssECI	CCNNGG	3 cut(s)	183, 628, 1605
BssMI	GATC	7 cut(s)	500, 580, 823, 1096, 1364, 1405, 1456
BssT1I	CCWWGG	1 cut(s)	628
Bst2UI	CCWGG	2 cut(s)	1415, 1606
Bst4CI	ACNGT	3 cut(s)	184, 1656, 1732
Bst6I	CTCTTC	1 cut(s)	885
BstAFI	CTTAAG	1 cut(s)	383
BstAPI	GCANNNNNTGC	2 cut(s)	1067, 1076
BstC8I	GCNNGC	4 cut(s)	85, 450, 958, 962
BstDEI	CTNAG	5 cut(s)	354, 748, 875, 1409, 1500
BstDSI	CCRYGG	1 cut(s)	183
BstEII	GGTNACC	1 cut(s)	551
BstENI	CCTNNNNNAGG	1 cut(s)	494
BstF5I	GGATG	7 cut(s)	397, 770, 862, 937, 1522, 1578, 1705
BstFNI	CGCG	1 cut(s)	1814
BstHHI	GCGC	2 cut(s)	687, 874
BstKTI	GATC	7 cut(s)	503, 583, 826, 1099, 1367, 1408, 1459
BstMBI	GATC	7 cut(s)	500, 580, 823, 1096, 1364, 1405, 1456
BstMWI	GCNNNNNNNGC	7 cut(s)	250, 394, 1067, 1076, 1153, 1331, 1811
BstNI	CCWGG	2 cut(s)	1415, 1606
BstNSI	RCATGY	1 cut(s)	452
BstPI	GGTNACC	1 cut(s)	551
BstSCI	CCNGG	5 cut(s)	555, 1084, 1165, 1413, 1604
BstSFI	CTRYAG	4 cut(s)	13, 151, 1137, 1393
BstUI	CGCG	1 cut(s)	1814
BstV1I	GCAGC	6 cut(s)	472, 856, 878, 1082, 1168, 1334
BstV2I	GAAGAC	1 cut(s)	1287
BstX2I	RGATCY	1 cut(s)	500
BstXI	CCANNNNNNTGG	2 cut(s)	212, 635
BstYI	RGATCY	1 cut(s)	500
Bsu36I	CCTNAGG	1 cut(s)	1500
BtgI	CCRYGG	1 cut(s)	183
BtgZI	GCGATG	1 cut(s)	648
BtsCI	GGATG	7 cut(s)	397, 770, 862, 937, 1522, 1578, 1705
BtsI	GCAGTG	2 cut(s)	160, 372
BtsIMutI	CAGTG	5 cut(s)	160, 212, 372, 1469, 1737
BtuMI	TCGCGA	1 cut(s)	1814
Cac8I	GCNNGC	4 cut(s)	85, 450, 958, 962
CciI	TCATGA	1 cut(s)	1231
CfoI	GCGC	2 cut(s)	687, 874
Cfr10I	RCCGGY	1 cut(s)	83
CseI	GACGC	2 cut(s)	250, 1434
Csp6I	GTAC	1 cut(s)	1082
CviAII	CATG	8 cut(s)	88, 191, 273, 449, 534, 1232, 1268, 1563
CviQI	GTAC	1 cut(s)	1082
DdeI	CTNAG	5 cut(s)	354, 748, 875, 1409, 1500
DpnI	GATC	7 cut(s)	502, 582, 825, 1098, 1366, 1407, 1458
DpnII	GATC	7 cut(s)	500, 580, 823, 1096, 1364, 1405, 1456
DrdI	GACNNNNNNGTC	1 cut(s)	1609
DseDI	GACNNNNNNGTC	1 cut(s)	1609
Eam1104I	CTCTTC	1 cut(s)	885
EarI	CTCTTC	1 cut(s)	885
Eco130I	CCWWGG	1 cut(s)	628
Eco81I	CCTNAGG	1 cut(s)	1500
Eco91I	GGTNACC	1 cut(s)	551
EcoNI	CCTNNNNNAGG	1 cut(s)	494
EcoO65I	GGTNACC	1 cut(s)	551
EcoRI	GAATTC	1 cut(s)	529
EcoRII	CCWGG	2 cut(s)	1413, 1604
EcoT14I	CCWWGG	1 cut(s)	628
ErhI	CCWWGG	1 cut(s)	628
FaeI	CATG	8 cut(s)	91, 194, 276, 452, 537, 1235, 1271, 1566
FaqI	GGGAC	1 cut(s)	1437
FatI	CATG	8 cut(s)	87, 190, 272, 448, 533, 1231, 1267, 1562
FauI	CCCGC	2 cut(s)	1433, 1743
FauNDI	CATATG	1 cut(s)	1327
FblI	GTMKAC	1 cut(s)	1392
Fnu4HI	GCNGC	6 cut(s)	486, 867, 870, 1071, 1157, 1323
FokI	GGATG	7 cut(s)	404, 777, 869, 944, 1529, 1585, 1692
Fsp4HI	GCNGC	6 cut(s)	486, 867, 870, 1071, 1157, 1323
FspBI	CTAG	3 cut(s)	1433, 1725, 1840
FspI	TGCGCA	1 cut(s)	686
GlaI	GCGC	2 cut(s)	686, 873
GluI	GCNGC	6 cut(s)	486, 867, 870, 1071, 1157, 1323
HapII	CCGG	6 cut(s)	84, 504, 557, 1086, 1166, 1831
HgaI	GACGC	2 cut(s)	250, 1434
HhaI	GCGC	2 cut(s)	687, 874
Hin1II	CATG	8 cut(s)	91, 194, 276, 452, 537, 1235, 1271, 1566
Hin6I	GCGC	2 cut(s)	685, 872
HinP1I	GCGC	2 cut(s)	685, 872
HinfI	GANTC	7 cut(s)	352, 404, 935, 1376, 1389, 1495, 1530
HpaII	CCGG	6 cut(s)	84, 504, 557, 1086, 1166, 1831
HphI	GGTGA	3 cut(s)	401, 518, 1644
Hpy166II	GTNNAC	4 cut(s)	240, 509, 517, 1393
Hpy188I	TCNGA	7 cut(s)	603, 715, 828, 907, 1360, 1779, 1788
Hpy188III	TCNNGA	8 cut(s)	722, 1232, 1454, 1499, 1514, 1553, 1614, 1813
Hpy8I	GTNNAC	4 cut(s)	240, 509, 517, 1393
Hpy99I	CGWCG	1 cut(s)	1819
HpyAV	CCTTC	4 cut(s)	541, 1310, 1541, 1570
HpyCH4III	ACNGT	3 cut(s)	184, 1656, 1732
HpyCH4IV	ACGT	1 cut(s)	1241
HpyF10VI	GCNNNNNNNGC	7 cut(s)	250, 394, 1067, 1076, 1153, 1331, 1811
HpyF3I	CTNAG	5 cut(s)	354, 748, 875, 1409, 1500
HpySE526I	ACGT	1 cut(s)	1241
Hsp92II	CATG	8 cut(s)	91, 194, 276, 452, 537, 1235, 1271, 1566
HspAI	GCGC	2 cut(s)	685, 872
KroI	GCCGGC	1 cut(s)	83
KroNI	GCCGGC	1 cut(s)	85
Kzo9I	GATC	7 cut(s)	500, 580, 823, 1096, 1364, 1405, 1456
LmnI	GCTCC	1 cut(s)	1588
Lsp1109I	GCAGC	6 cut(s)	472, 856, 878, 1082, 1168, 1334
LweI	GCATC	3 cut(s)	1066, 1174, 1507
MaeI	CTAG	3 cut(s)	1433, 1725, 1840
MaeII	ACGT	1 cut(s)	1241
MaeIII	GTNAC	5 cut(s)	106, 172, 223, 370, 551
MalI	GATC	7 cut(s)	502, 582, 825, 1098, 1366, 1407, 1458
MbiI	CCGCTC	1 cut(s)	1750
MboI	GATC	7 cut(s)	500, 580, 823, 1096, 1364, 1405, 1456
MboII	GAAGA	6 cut(s)	413, 485, 902, 1292, 1687, 1729
MfeI	CAATTG	2 cut(s)	426, 899
MflI	RGATCY	1 cut(s)	500
MhlI	GDGCHC	1 cut(s)	1593
MlyI	GAGTC	4 cut(s)	346, 1398, 1489, 1524
MmeI	TCCRAC	2 cut(s)	570, 785
MroNI	GCCGGC	1 cut(s)	83
MseI	TTAA	6 cut(s)	6, 363, 384, 597, 1104, 1677
MslI	CAYNNNNRTG	3 cut(s)	205, 1182, 1567
MspA1I	CMGCKG	1 cut(s)	869
MspCI	CTTAAG	1 cut(s)	383
MspI	CCGG	6 cut(s)	84, 504, 557, 1086, 1166, 1831
MspR9I	CCNGG	5 cut(s)	557, 1086, 1167, 1415, 1606
MunI	CAATTG	2 cut(s)	426, 899
Mva1269I	GAATGC	1 cut(s)	1428
MvaI	CCWGG	2 cut(s)	1415, 1606
MvnI	CGCG	1 cut(s)	1814
MwoI	GCNNNNNNNGC	7 cut(s)	250, 394, 1067, 1076, 1153, 1331, 1811
NaeI	GCCGGC	1 cut(s)	85
NciI	CCSGG	3 cut(s)	557, 1086, 1167
NdeI	CATATG	1 cut(s)	1327
NdeII	GATC	7 cut(s)	500, 580, 823, 1096, 1364, 1405, 1456
NgoMIV	GCCGGC	1 cut(s)	83
NlaIII	CATG	8 cut(s)	91, 194, 276, 452, 537, 1235, 1271, 1566
NlaIV	GGNNCC	2 cut(s)	502, 625
NmuCI	GTSAC	1 cut(s)	370
NruI	TCGCGA	1 cut(s)	1814
NsbI	TGCGCA	1 cut(s)	686
NspI	RCATGY	1 cut(s)	452
OliI	CACNNNNGTG	1 cut(s)	205
PaeI	GCATGC	1 cut(s)	452
PagI	TCATGA	1 cut(s)	1231
PctI	GAATGC	1 cut(s)	1428
PdiI	GCCGGC	1 cut(s)	85
PfeI	GAWTC	3 cut(s)	404, 935, 1376
PkrI	GCNGC	6 cut(s)	487, 868, 871, 1072, 1158, 1324
PleI	GAGTC	4 cut(s)	346, 1397, 1489, 1524
PpsI	GAGTC	4 cut(s)	346, 1397, 1489, 1524
PsiI	TTATAA	1 cut(s)	1053
Psp6I	CCWGG	2 cut(s)	1413, 1604
PspEI	GGTNACC	1 cut(s)	551
PspGI	CCWGG	2 cut(s)	1413, 1604
PspN4I	GGNNCC	2 cut(s)	502, 625
PstI	CTGCAG	3 cut(s)	17, 155, 1141
PsuI	RGATCY	1 cut(s)	500
PvuII	CAGCTG	1 cut(s)	869
RruI	TCGCGA	1 cut(s)	1814
RsaI	GTAC	1 cut(s)	1083
RsaNI	GTAC	1 cut(s)	1082
RseI	CAYNNNNRTG	3 cut(s)	205, 1182, 1567
SaqAI	TTAA	6 cut(s)	6, 363, 384, 597, 1104, 1677
SatI	GCNGC	6 cut(s)	486, 867, 870, 1071, 1157, 1323
Sau3AI	GATC	7 cut(s)	500, 580, 823, 1096, 1364, 1405, 1456
SchI	GAGTC	4 cut(s)	346, 1398, 1489, 1524
ScrFI	CCNGG	5 cut(s)	557, 1086, 1167, 1415, 1606
SduI	GDGCHC	1 cut(s)	1593
SfaNI	GCATC	3 cut(s)	1066, 1174, 1507
SfcI	CTRYAG	4 cut(s)	13, 151, 1137, 1393
SmiMI	CAYNNNNRTG	3 cut(s)	205, 1182, 1567
SmlI	CTYRAG	4 cut(s)	383, 491, 616, 1013
SmoI	CTYRAG	4 cut(s)	383, 491, 616, 1013
SphI	GCATGC	1 cut(s)	452
SsiI	CCGC	3 cut(s)	621, 1426, 1750
SspI	AATATT	1 cut(s)	1465
SspMI	CTAG	3 cut(s)	1433, 1725, 1840
StyD4I	CCNGG	5 cut(s)	555, 1084, 1165, 1413, 1604
StyI	CCWWGG	1 cut(s)	628
TaaI	ACNGT	3 cut(s)	184, 1656, 1732
TaiI	ACGT	1 cut(s)	1244
TaqI	TCGA	1 cut(s)	888
TaqII	GACCGA	1 cut(s)	1377
TfiI	GAWTC	3 cut(s)	404, 935, 1376
Tru1I	TTAA	6 cut(s)	6, 363, 384, 597, 1104, 1677
Tru9I	TTAA	6 cut(s)	6, 363, 384, 597, 1104, 1677
TscAI	CASTG	5 cut(s)	160, 212, 379, 1476, 1737
TseFI	GTSAC	1 cut(s)	370
TseI	GCWGC	6 cut(s)	485, 866, 869, 1070, 1156, 1322
Tsp45I	GTSAC	1 cut(s)	370
TspGWI	ACGGA	1 cut(s)	1832
TspRI	CASTG	5 cut(s)	160, 212, 379, 1476, 1737
Vha464I	CTTAAG	1 cut(s)	383
XagI	CCTNNNNNAGG	1 cut(s)	494
XapI	RAATTY	5 cut(s)	529, 691, 734, 1033, 1203
XceI	RCATGY	1 cut(s)	452
XcmI	CCANNNNNNNNNTGG	2 cut(s)	52, 1468
XmiI	GTMKAC	1 cut(s)	1392
XspI	CTAG	3 cut(s)	1433, 1725, 1840

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.