Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr08

Orthogroup ID

OG0000648

Physical Location & Seq

Genomic Coordinates Forward (+)

5372835 .. 5378671

Gene Structure 5837 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD08G1067400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2139 bp

ATGCCGATTCAAGAAGAAAAATTGAATGGACATCTGAAGACAGTTTCATATGTGGAAACACCAATTATGTCTACATATTTGGTGGCCATTGTTGTTGGATTGTTTGATTACGTTGAAGATCATACTTCTGATGGGGTCAAAGTGCGGGTATATTGTCAAGTTGGTAAGGCAGACCAGGGGAAGTTTGCTTTGCACTTTGCTGTCAAGACACTTGAATGGTGCACAGAATACTTTGCTGTGCCATACCCGTTGCCCAAATTGGATATGGTTGCAATACCTGATTTTTCTTTCGCCGGCATGGAGAATTATGGTTTAGTTACATACCGAGAAATGGCTTTGCTTTTTGATGAACAACATTCTGCAGCTGCCAACAAGCAAAGGGTTACGATTACCGTGGCACATGAATTGGCACACCAGTGGTTTGGCAATCTTGTAACAAAGGAATGGTGGACGCATTTATGGCTGAATGAGGGATTTGCAACATGGGTGAGCTATTTAGCTACTGATAGCTTATTCCCAGAGTGGAAAATATGGACTCAGTTTCTTAATGAAGTCACTGCTGGTCTTAAGCTGGATGGGCTTGAAGAATCTCACCCCATTGAGGTGGAGATCAATCATGCTGCTGAGATTGATGAAATACTTGATGCGATAAGTTATAAAAAAGGTGCTACTGTTATTCGGATGCTACAAAGCTATCTAGGTGCTGAAGTCTTCCAGAGGTCAATTGCTTCATATATCAAAAAGCATGCTTACTCAAATGCAAAGACAGAAGATTTGTGGGCTGCCCTTGAGGAGGGATCCGGTGAACCTGTAAACAAACTAATGAATTCATGGACACAGCAGAAGGGTTACCCGGTCATTTCTGTCAAAGTCAAAGATCAAAAGTTGGAGTTTAATCAGACACAATTCTACTCAAGCGGTTCCCAAGGCGATGGGCAATGGATTGTGCCGATTACATTATCCTGTGGCTCGTATGATGTGCGCAAGAATTTCCTACTACAAGCGAAGTCTGAAACTCTTGACATAAAGGAATTTCTGGGTTGCTCAGTAGGAAAGGCTGGATGTGGAGGCACAAGCAACAAAGACAATGCTTTATGCAGTTGGATAAAAGTCAATGTGGATCAGACTGGTTTTTACAGAGTGAAATATGAGGATGAACTTGCAGCTGCGCTTAGAAACGCTATCGAAGAGAAGCAATTGTCTGAAACTGACAGATTTGGCATTTTGGATGATTCCTTTGCCCTATCAATGGCTCGCAAGCAGTCTTTTGCTTCATTGCTTACCTTGTTGAGTGCATACAGAGAGGAACTTGAGTATATCGTGCTGTCAAATTTGATTGCTATAAGTTATAATCTGGCAAGAATTGCAGCCGATGCTGTACCCGGACTACTGGATCACATTAAACAATTCTTTATTGGACTTTTCCAGTATTCTGCAGAGAGGCTTGGTTGGCAGCCTAAACCGGGCGAAAGCCATTTAGATGCAATGTTGAGAGGAGAAATTTTGACTGCACTTGCTGTTTTTGGTCATGAACTGACGTTAGATGAAGCAAGTAGGCGTTTTCATGCCTTTATAGAAGACAGAAACACGCCCCTCCTTCCCCCAGACATTAGAAAGGCAGCATATGTGGCTGTAATGCAAAGAACAAGTGTATCTGACCGATCAGGCTATGAATCTCTTGTTAGAGTCTACAGAGAGAGTGATCTAAGCCAGGAGAAAACCCGCATTCTAGGTTCTTTAGCGTCTTGTCCCGATCCCAATATTACACTGGAAGTTCTCCACTTTATATTGACTCCTGAGGTTCGCAGTCAGGATGCTGTATTTGGACTCGCTGTTAGTAATGAAGGTCGGGAAACAGCATGGAAGTGGATGAAGGATAACTGGGAGCACATCTCAAAGACCTGGGGGTCTGGATTACTAATTCCTCGCTTTGTCAATGAAATTGTTTCACCGTTTGCTTCATTTGACAAGGTTAAGGAAGTAGATGAGTTCTTCAAAGCACATCCAAACCCGAAGATAACTAGAACAGTGAAGCAGAGCATTGAGCGGGTGCAAATCAACGCCAAATGGGTTCAGAGTGTTCAGAGCGAGAGAAACCTTGCCGATGTCGCGACGGAGTTGGCATACCGGAAATACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001666 GO:0003674 GO:0003824 GO:0004177 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0006508 GO:0006518 GO:0006807 GO:0006810 GO:0006950 GO:0008144 GO:0008150 GO:0008152 GO:0008233 GO:0008235 GO:0008237 GO:0008238 GO:0008270 GO:0009056 GO:0009628 GO:0009914 GO:0009926 GO:0009987 GO:0010013 GO:0010817 GO:0016020 GO:0016787 GO:0019538 GO:0031090 GO:0031406 GO:0033218 GO:0033293 GO:0033554 GO:0034641 GO:0036094 GO:0036293 GO:0036294 GO:0042221 GO:0042277 GO:0043167 GO:0043168 GO:0043169 GO:0043170 GO:0043171 GO:0043177 GO:0043226 GO:0043227 GO:0043603 GO:0044237 GO:0044238 GO:0044248 GO:0044422 GO:0044424 GO:0044444 GO:0044464 GO:0046872 GO:0046914 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0060918 GO:0065007 GO:0065008 GO:0070006 GO:0070011 GO:0070482 GO:0070887 GO:0071453 GO:0071456 GO:0071704 GO:0071944 GO:0097159 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko00480 ko01100 ko04614 ko04640 map00480 map01100 map04614 map04640

Pfam Domains

Protein Families

ERAP1_C Peptidase_M1

Protein Analysis

713

Amino Acids

80.59

Weight (kDa)

5.53

Isoelectric Point (pI)

33.32

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Peptidase_M1	PF01433	62 - 278	6.7e-85	Peptidase family M1 domain
ERAP1_C	PF11838	368 - 685	2.6e-82	ERAP1-like C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000648)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G33090
fragaria_vesca	FvH4_2g31431 FvH4_2g31440 FvH4_6g34250 FvH4_6g34262 FvH4_6g34263
malus_domestica	MD08G1066400.v1.1 MD08G1066500.v1.1 MD08G1067400.v1.1 MD09G1070300.v1.1 MD09G1187200.v1.1 MD10G1090900.v1.1 MD15G1054400.v1.1 MD17G1171400.v1.1
prunus_persica	Prupe.1G407900_v2.0.a1 Prupe.1G408000_v2.0.a1 Prupe.1G408000_v2.0.a1 Prupe.1G408000_v2.0.a1 Prupe.1G457300_v2.0.a1 Prupe.3G044500_v2.0.a1 Prupe.3G044500_v2.0.a1
pyrus_communis	pycom08g05520 pycom08g05550 pycom08g05560 pycom08g05590 pycom09g10370 pycom09g10380 pycom10g07440 pycom10g07460 pycom15g05130 pycom15g05150 pycom17g16900
rosa_chinensis	RchiOBHm_Chr2g0144571 RchiOBHm_Chr2g0144611 RchiOBHm_Chr4g0390591 RchiOBHm_Chr6g0311371 RchiOBHm_Chr6g0311381
rosa_laevigata	RLG00000009010 RLG00000009289 RLG00000010411 RLG00000010412 RLG00000020090 RLG00000020092 RLG00000036974
rosa_multiflora	Rmu_co8212940.1_g000001 Rmu_sc0005789.1_g000001 Rmu_sc0008536.1_g000010 Rmu_sc0008536.1_g000011 Rmu_sc0009300.1_g000002
rosa_roxburghii	Rroxscaffold_1G00056400 Rroxscaffold_2G00084720 Rroxscaffold_2G00101200 Rroxscaffold_7G00157670 Rroxscaffold_7G00157680
rosa_rugosa	Rorug02G0387900 Rorug02G0388000 Rorug02G0388100 Rorug06G0388300 Rorug06G0388400
rosa_samantha	Rh2AG440000 Rh2AG440100 Rh2BG450000 Rh2BG450300 Rh2BG450500 Rh2CG427000 Rh2CG427200 Rh2DG459900 Rh2DG460300 Rh2DG460500 Rh6AG502600 Rh6AG502700 Rh6BG513300 Rh6CG519100 Rh6CG519200
rosa_wichuraiana	Rw2G036000 Rw6G043770 Rw6G043780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	657, 1350
AasI	GACNNNNNNGTC	1 cut(s)	1906
Acc16I	TGCGCA	1 cut(s)	983
AccBSI	CCGCTC	1 cut(s)	2047
AccI	GTMKAC	2 cut(s)	71, 1689
AccII	CGCG	1 cut(s)	2111
AciI	CCGC	4 cut(s)	145, 918, 1723, 2047
AclWI	GGATC	5 cut(s)	792, 805, 1128, 1401, 1748
AcoI	YGGCCR	1 cut(s)	84
AcsI	RAATTY	5 cut(s)	826, 988, 1031, 1330, 1500
AcuI	CTGAAG	2 cut(s)	56, 726
AfaI	GTAC	1 cut(s)	1380
AfiI	CCNNNNNNNGG	5 cut(s)	331, 601, 793, 1249, 1463
AflII	CTTAAG	1 cut(s)	566
AgsI	TTSAA	6 cut(s)	11, 25, 116, 215, 584, 1996
AjnI	CCWGG	3 cut(s)	174, 1710, 1901
AleI	CACNNNNGTG	1 cut(s)	415
AluBI	AGCT	7 cut(s)	365, 492, 500, 510, 571, 693, 1166
AluI	AGCT	7 cut(s)	365, 492, 500, 510, 571, 693, 1166
Alw21I	GWGCWC	2 cut(s)	224, 1890
Alw44I	GTGCAC	1 cut(s)	220
AlwI	GGATC	5 cut(s)	792, 805, 1128, 1401, 1748
AoxI	GGCC	1 cut(s)	84
ApaLI	GTGCAC	1 cut(s)	220
ApeKI	GCWGC	9 cut(s)	362, 365, 620, 782, 1163, 1166, 1367, 1453, 1619
ApoI	RAATTY	5 cut(s)	826, 988, 1031, 1330, 1500
ArsI	GACNNNNNNTTYG	2 cut(s)	757, 789
AspLEI	GCGC	2 cut(s)	984, 1171
AsuC2I	CCSGG	3 cut(s)	854, 1383, 1464
AsuHPI	GGTGA	4 cut(s)	499, 584, 815, 1941
AxyI	CCTNAGG	1 cut(s)	1797
BaeGI	GKGCMC	1 cut(s)	224
BaeI	ACNNNNGTAYC	2 cut(s)	1635, 1668
BalI	TGGCCA	1 cut(s)	86
BamHI	GGATCC	1 cut(s)	797
BbsI	GAAGAC	3 cut(s)	44, 703, 1584
Bbv12I	GWGCWC	2 cut(s)	224, 1890
BbvI	GCAGC	9 cut(s)	352, 374, 607, 769, 1153, 1175, 1379, 1465, 1631
BccI	CCATC	3 cut(s)	125, 569, 926
BciT130I	CCWGG	3 cut(s)	176, 1712, 1903
BcnI	CCSGG	3 cut(s)	854, 1383, 1464
BfaI	CTAG	4 cut(s)	698, 1730, 2022, 2137
BfmI	CTRYAG	3 cut(s)	360, 1434, 1690
BfrI	CTTAAG	1 cut(s)	566
BisI	GCNGC	9 cut(s)	363, 366, 621, 783, 1164, 1167, 1368, 1454, 1620
BlsI	GCNGC	9 cut(s)	364, 367, 622, 784, 1165, 1168, 1369, 1455, 1621
Bme1390I	CCNGG	6 cut(s)	176, 854, 1383, 1464, 1712, 1903
BmiI	GGNNCC	2 cut(s)	799, 922
BmrFI	CCNGG	6 cut(s)	176, 854, 1383, 1464, 1712, 1903
BmrI	ACTGGG	1 cut(s)	1891
BmsI	GCATC	5 cut(s)	634, 672, 1363, 1471, 1804
BmuI	ACTGGG	1 cut(s)	1891
BpiI	GAAGAC	3 cut(s)	44, 703, 1584
BplI	GAGNNNNNCTC	2 cut(s)	1877, 1909
BpuEI	CTTGAG	3 cut(s)	809, 898, 1331
BpuMI	CCSGG	3 cut(s)	854, 1383, 1464
BsaJI	CCNNGG	4 cut(s)	175, 393, 925, 1902
BsaWI	WCCGGW	2 cut(s)	800, 2127
Bsc4I	CCNNNNNNNGG	5 cut(s)	331, 601, 793, 1249, 1463
Bse118I	RCCGGY	1 cut(s)	293
Bse1I	ACTGG	6 cut(s)	415, 1132, 1395, 1426, 1773, 1886
Bse21I	CCTNAGG	1 cut(s)	1797
Bse3DI	GCAATG	3 cut(s)	944, 1274, 1491
BseBI	CCWGG	3 cut(s)	176, 1712, 1903
BseDI	CCNNGG	4 cut(s)	175, 393, 925, 1902
BseGI	GGATG	8 cut(s)	580, 687, 1067, 1159, 1234, 1819, 1875, 2002
BseLI	CCNNNNNNNGG	5 cut(s)	331, 601, 793, 1249, 1463
BseMI	GCAATG	3 cut(s)	944, 1274, 1491
BseMII	CTCAG	4 cut(s)	551, 615, 1059, 1788
BseNI	ACTGG	6 cut(s)	415, 1132, 1395, 1426, 1773, 1886
BseRI	GAGGAG	2 cut(s)	806, 1509
BseSI	GKGCMC	1 cut(s)	224
BseXI	GCAGC	9 cut(s)	352, 374, 607, 769, 1153, 1175, 1379, 1465, 1631
BsgI	GTGCAG	1 cut(s)	1494
Bsh1236I	CGCG	1 cut(s)	2111
BshFI	GGCC	1 cut(s)	86
BsiHKAI	GWGCWC	2 cut(s)	224, 1890
BsiSI	CCGG	6 cut(s)	294, 801, 854, 1383, 1463, 2128
BslFI	GGGAC	1 cut(s)	1734
BslI	CCNNNNNNNGG	5 cut(s)	331, 601, 793, 1249, 1463
BsmFI	GGGAC	1 cut(s)	1734
BsmI	GAATGC	1 cut(s)	1725
BsnI	GGCC	1 cut(s)	86
Bsp1286I	GDGCHC	2 cut(s)	224, 1890
Bsp143I	GATC	9 cut(s)	118, 609, 797, 877, 1120, 1393, 1661, 1702, 1753
Bsp68I	TCGCGA	1 cut(s)	2111
BspACI	CCGC	4 cut(s)	145, 918, 1723, 2047
BspANI	GGCC	1 cut(s)	86
BspCNI	CTCAG	4 cut(s)	550, 616, 1058, 1789
BspFNI	CGCG	1 cut(s)	2111
BspHI	TCATGA	1 cut(s)	1528
BspLI	GGNNCC	2 cut(s)	799, 922
BspMAI	CTGCAG	2 cut(s)	364, 1438
BspPI	GGATC	5 cut(s)	792, 805, 1128, 1401, 1748
BspTI	CTTAAG	1 cut(s)	566
BsrBI	CCGCTC	1 cut(s)	2047
BsrDI	GCAATG	3 cut(s)	944, 1274, 1491
BsrFI	RCCGGY	1 cut(s)	293
BsrI	ACTGG	6 cut(s)	415, 1132, 1395, 1426, 1773, 1886
BssAI	RCCGGY	1 cut(s)	293
BssECI	CCNNGG	4 cut(s)	175, 393, 925, 1902
BssMI	GATC	9 cut(s)	118, 609, 797, 877, 1120, 1393, 1661, 1702, 1753
BssT1I	CCWWGG	1 cut(s)	925
Bst2UI	CCWGG	3 cut(s)	176, 1712, 1903
Bst4CI	ACNGT	5 cut(s)	43, 394, 673, 1953, 2029
Bst6I	CTCTTC	1 cut(s)	1182
BstAFI	CTTAAG	1 cut(s)	566
BstAPI	GCANNNNNTGC	2 cut(s)	1364, 1373
BstC8I	GCNNGC	4 cut(s)	295, 747, 1255, 1259
BstDEI	CTNAG	6 cut(s)	537, 624, 1045, 1172, 1706, 1797
BstDSI	CCRYGG	1 cut(s)	393
BstEII	GGTNACC	1 cut(s)	848
BstENI	CCTNNNNNAGG	1 cut(s)	791
BstF5I	GGATG	8 cut(s)	580, 687, 1067, 1159, 1234, 1819, 1875, 2002
BstFNI	CGCG	1 cut(s)	2111
BstHHI	GCGC	2 cut(s)	984, 1171
BstKTI	GATC	9 cut(s)	121, 612, 800, 880, 1123, 1396, 1664, 1705, 1756
BstMBI	GATC	9 cut(s)	118, 609, 797, 877, 1120, 1393, 1661, 1702, 1753
BstMWI	GCNNNNNNNGC	7 cut(s)	460, 577, 1364, 1373, 1450, 1628, 2108
BstNI	CCWGG	3 cut(s)	176, 1712, 1903
BstNSI	RCATGY	1 cut(s)	749
BstPI	GGTNACC	1 cut(s)	848
BstSCI	CCNGG	6 cut(s)	174, 852, 1381, 1462, 1710, 1901
BstSFI	CTRYAG	3 cut(s)	360, 1434, 1690
BstSLI	GKGCMC	1 cut(s)	224
BstUI	CGCG	1 cut(s)	2111
BstV1I	GCAGC	9 cut(s)	352, 374, 607, 769, 1153, 1175, 1379, 1465, 1631
BstV2I	GAAGAC	3 cut(s)	44, 703, 1584
BstX2I	RGATCY	1 cut(s)	797
BstXI	CCANNNNNNTGG	3 cut(s)	422, 604, 932
BstYI	RGATCY	1 cut(s)	797
Bsu36I	CCTNAGG	1 cut(s)	1797
BsuRI	GGCC	1 cut(s)	86
BtgI	CCRYGG	1 cut(s)	393
BtgZI	GCGATG	1 cut(s)	945
BtsCI	GGATG	8 cut(s)	580, 687, 1067, 1159, 1234, 1819, 1875, 2002
BtsI	GCAGTG	1 cut(s)	555
BtsIMutI	CAGTG	4 cut(s)	422, 555, 1766, 2034
BtuMI	TCGCGA	1 cut(s)	2111
Cac8I	GCNNGC	4 cut(s)	295, 747, 1255, 1259
CciI	TCATGA	1 cut(s)	1528
CfoI	GCGC	2 cut(s)	984, 1171
Cfr10I	RCCGGY	1 cut(s)	293
CseI	GACGC	2 cut(s)	460, 1731
Csp6I	GTAC	1 cut(s)	1379
CviAII	CATG	9 cut(s)	298, 401, 483, 617, 746, 831, 1529, 1565, 1860
CviQI	GTAC	1 cut(s)	1379
DdeI	CTNAG	6 cut(s)	537, 624, 1045, 1172, 1706, 1797
DpnI	GATC	9 cut(s)	120, 611, 799, 879, 1122, 1395, 1663, 1704, 1755
DpnII	GATC	9 cut(s)	118, 609, 797, 877, 1120, 1393, 1661, 1702, 1753
DrdI	GACNNNNNNGTC	1 cut(s)	1906
DseDI	GACNNNNNNGTC	1 cut(s)	1906
EaeI	YGGCCR	1 cut(s)	84
Eam1104I	CTCTTC	1 cut(s)	1182
EarI	CTCTTC	1 cut(s)	1182
Eco130I	CCWWGG	1 cut(s)	925
Eco57I	CTGAAG	2 cut(s)	56, 726
Eco81I	CCTNAGG	1 cut(s)	1797
Eco91I	GGTNACC	1 cut(s)	848
EcoNI	CCTNNNNNAGG	1 cut(s)	791
EcoO65I	GGTNACC	1 cut(s)	848
EcoRI	GAATTC	1 cut(s)	826
EcoRII	CCWGG	3 cut(s)	174, 1710, 1901
EcoT14I	CCWWGG	1 cut(s)	925
ErhI	CCWWGG	1 cut(s)	925
FaeI	CATG	9 cut(s)	301, 404, 486, 620, 749, 834, 1532, 1568, 1863
FaqI	GGGAC	1 cut(s)	1734
FatI	CATG	9 cut(s)	297, 400, 482, 616, 745, 830, 1528, 1564, 1859
FauI	CCCGC	3 cut(s)	138, 1730, 2040
FauNDI	CATATG	2 cut(s)	49, 1624
FblI	GTMKAC	2 cut(s)	71, 1689
Fnu4HI	GCNGC	9 cut(s)	363, 366, 621, 783, 1164, 1167, 1368, 1454, 1620
FokI	GGATG	8 cut(s)	587, 694, 1074, 1166, 1241, 1826, 1882, 1989
Fsp4HI	GCNGC	9 cut(s)	363, 366, 621, 783, 1164, 1167, 1368, 1454, 1620
FspBI	CTAG	4 cut(s)	698, 1730, 2022, 2137
FspI	TGCGCA	1 cut(s)	983
GlaI	GCGC	2 cut(s)	983, 1170
GluI	GCNGC	9 cut(s)	363, 366, 621, 783, 1164, 1167, 1368, 1454, 1620
HaeIII	GGCC	1 cut(s)	86
HapII	CCGG	6 cut(s)	294, 801, 854, 1383, 1463, 2128
HgaI	GACGC	2 cut(s)	460, 1731
HhaI	GCGC	2 cut(s)	984, 1171
Hin1II	CATG	9 cut(s)	301, 404, 486, 620, 749, 834, 1532, 1568, 1863
Hin6I	GCGC	2 cut(s)	982, 1169
HinP1I	GCGC	2 cut(s)	982, 1169
HinfI	GANTC	8 cut(s)	7, 535, 587, 1232, 1673, 1686, 1792, 1827
HpaII	CCGG	6 cut(s)	294, 801, 854, 1383, 1463, 2128
HphI	GGTGA	4 cut(s)	499, 584, 815, 1941
Hpy166II	GTNNAC	6 cut(s)	72, 222, 450, 806, 814, 1690
Hpy8I	GTNNAC	6 cut(s)	72, 222, 450, 806, 814, 1690
Hpy99I	CGWCG	1 cut(s)	2116
HpyAV	CCTTC	4 cut(s)	838, 1607, 1838, 1867
HpyCH4III	ACNGT	5 cut(s)	43, 394, 673, 1953, 2029
HpyCH4IV	ACGT	2 cut(s)	111, 1538
HpyF10VI	GCNNNNNNNGC	7 cut(s)	460, 577, 1364, 1373, 1450, 1628, 2108
HpyF3I	CTNAG	6 cut(s)	537, 624, 1045, 1172, 1706, 1797
HpySE526I	ACGT	2 cut(s)	111, 1538
Hsp92II	CATG	9 cut(s)	301, 404, 486, 620, 749, 834, 1532, 1568, 1863
HspAI	GCGC	2 cut(s)	982, 1169
KroI	GCCGGC	1 cut(s)	293
KroNI	GCCGGC	1 cut(s)	295
Kzo9I	GATC	9 cut(s)	118, 609, 797, 877, 1120, 1393, 1661, 1702, 1753
LmnI	GCTCC	1 cut(s)	1885
Lsp1109I	GCAGC	9 cut(s)	352, 374, 607, 769, 1153, 1175, 1379, 1465, 1631
LweI	GCATC	5 cut(s)	634, 672, 1363, 1471, 1804
MaeI	CTAG	4 cut(s)	698, 1730, 2022, 2137
MaeII	ACGT	2 cut(s)	111, 1538
MaeIII	GTNAC	5 cut(s)	316, 382, 433, 553, 848
MalI	GATC	9 cut(s)	120, 611, 799, 879, 1122, 1395, 1663, 1704, 1755
MbiI	CCGCTC	1 cut(s)	2047
MboI	GATC	9 cut(s)	118, 609, 797, 877, 1120, 1393, 1661, 1702, 1753
MfeI	CAATTG	2 cut(s)	723, 1196
MflI	RGATCY	1 cut(s)	797
MhlI	GDGCHC	2 cut(s)	224, 1890
MlsI	TGGCCA	1 cut(s)	86
MluNI	TGGCCA	1 cut(s)	86
MlyI	GAGTC	4 cut(s)	529, 1695, 1786, 1821
MmeI	TCCRAC	3 cut(s)	76, 867, 1082
Mox20I	TGGCCA	1 cut(s)	86
MroNI	GCCGGC	1 cut(s)	293
MscI	TGGCCA	1 cut(s)	86
MseI	TTAA	5 cut(s)	546, 567, 894, 1401, 1974
MslI	CAYNNNNRTG	5 cut(s)	214, 415, 602, 1479, 1864
Msp20I	TGGCCA	1 cut(s)	86
MspA1I	CMGCKG	2 cut(s)	365, 1166
MspCI	CTTAAG	1 cut(s)	566
MspI	CCGG	6 cut(s)	294, 801, 854, 1383, 1463, 2128
MspR9I	CCNGG	6 cut(s)	176, 854, 1383, 1464, 1712, 1903
MunI	CAATTG	2 cut(s)	723, 1196
Mva1269I	GAATGC	1 cut(s)	1725
MvaI	CCWGG	3 cut(s)	176, 1712, 1903
MvnI	CGCG	1 cut(s)	2111
MwoI	GCNNNNNNNGC	7 cut(s)	460, 577, 1364, 1373, 1450, 1628, 2108
NaeI	GCCGGC	1 cut(s)	295
NciI	CCSGG	3 cut(s)	854, 1383, 1464
NdeI	CATATG	2 cut(s)	49, 1624
NdeII	GATC	9 cut(s)	118, 609, 797, 877, 1120, 1393, 1661, 1702, 1753
NgoMIV	GCCGGC	1 cut(s)	293
NlaIII	CATG	9 cut(s)	301, 404, 486, 620, 749, 834, 1532, 1568, 1863
NlaIV	GGNNCC	2 cut(s)	799, 922
NmuCI	GTSAC	1 cut(s)	553
NruI	TCGCGA	1 cut(s)	2111
NsbI	TGCGCA	1 cut(s)	983
NspI	RCATGY	1 cut(s)	749
OliI	CACNNNNGTG	1 cut(s)	415
PaeI	GCATGC	1 cut(s)	749
PagI	TCATGA	1 cut(s)	1528
PctI	GAATGC	1 cut(s)	1725
PdiI	GCCGGC	1 cut(s)	295
PfeI	GAWTC	4 cut(s)	7, 587, 1232, 1673
PkrI	GCNGC	9 cut(s)	364, 367, 622, 784, 1165, 1168, 1369, 1455, 1621
PleI	GAGTC	4 cut(s)	529, 1694, 1786, 1821
PpsI	GAGTC	4 cut(s)	529, 1694, 1786, 1821
PsiI	TTATAA	2 cut(s)	657, 1350
Psp6I	CCWGG	3 cut(s)	174, 1710, 1901
PspEI	GGTNACC	1 cut(s)	848
PspGI	CCWGG	3 cut(s)	174, 1710, 1901
PspN4I	GGNNCC	2 cut(s)	799, 922
PstI	CTGCAG	2 cut(s)	364, 1438
PsuI	RGATCY	1 cut(s)	797
PvuII	CAGCTG	2 cut(s)	365, 1166
RruI	TCGCGA	1 cut(s)	2111
RsaI	GTAC	1 cut(s)	1380
RsaNI	GTAC	1 cut(s)	1379
RseI	CAYNNNNRTG	5 cut(s)	214, 415, 602, 1479, 1864
SaqAI	TTAA	5 cut(s)	546, 567, 894, 1401, 1974
SatI	GCNGC	9 cut(s)	363, 366, 621, 783, 1164, 1167, 1368, 1454, 1620
Sau3AI	GATC	9 cut(s)	118, 609, 797, 877, 1120, 1393, 1661, 1702, 1753
SchI	GAGTC	4 cut(s)	529, 1695, 1786, 1821
ScrFI	CCNGG	6 cut(s)	176, 854, 1383, 1464, 1712, 1903
SduI	GDGCHC	2 cut(s)	224, 1890
SfaNI	GCATC	5 cut(s)	634, 672, 1363, 1471, 1804
SfcI	CTRYAG	3 cut(s)	360, 1434, 1690
SmiMI	CAYNNNNRTG	5 cut(s)	214, 415, 602, 1479, 1864
SmlI	CTYRAG	4 cut(s)	566, 788, 913, 1310
SmoI	CTYRAG	4 cut(s)	566, 788, 913, 1310
SphI	GCATGC	1 cut(s)	749
SsiI	CCGC	4 cut(s)	145, 918, 1723, 2047
SspI	AATATT	1 cut(s)	1762
SspMI	CTAG	4 cut(s)	698, 1730, 2022, 2137
StyD4I	CCNGG	6 cut(s)	174, 852, 1381, 1462, 1710, 1901
StyI	CCWWGG	1 cut(s)	925
TaaI	ACNGT	5 cut(s)	43, 394, 673, 1953, 2029
TaiI	ACGT	2 cut(s)	114, 1541
TaqI	TCGA	1 cut(s)	1185
TaqII	GACCGA	1 cut(s)	1674
TfiI	GAWTC	4 cut(s)	7, 587, 1232, 1673
Tru1I	TTAA	5 cut(s)	546, 567, 894, 1401, 1974
Tru9I	TTAA	5 cut(s)	546, 567, 894, 1401, 1974
TscAI	CASTG	4 cut(s)	422, 562, 1773, 2034
TseFI	GTSAC	1 cut(s)	553
TseI	GCWGC	9 cut(s)	362, 365, 620, 782, 1163, 1166, 1367, 1453, 1619
Tsp45I	GTSAC	1 cut(s)	553
TspGWI	ACGGA	1 cut(s)	2129
TspRI	CASTG	4 cut(s)	422, 562, 1773, 2034
Vha464I	CTTAAG	1 cut(s)	566
VneI	GTGCAC	1 cut(s)	220
XagI	CCTNNNNNAGG	1 cut(s)	791
XapI	RAATTY	5 cut(s)	826, 988, 1031, 1330, 1500
XceI	RCATGY	1 cut(s)	749
XcmI	CCANNNNNNNNNTGG	2 cut(s)	262, 1765
XmiI	GTMKAC	2 cut(s)	71, 1689
XspI	CTAG	4 cut(s)	698, 1730, 2022, 2137

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.