pycom08g05550

aminopeptidase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr8
Physical Location & Seq
Forward (+)
4237742 .. 4243081
5340 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom08g05550.4

Sequence Viewer

Length: 1014 bp
ATGGATAATTATGCTACATTCAAGATTACACTTGATGGTGTTCCGTCTGAACTAGTAGCCCTCTCTAACATGCCGATTCAAGAAGAAAAATTGAGTGGACATCTGAAGACAGTTTCATATGTGGAAACACCAATTATGTCTACATATTTGGTGGCCATTGTTGTCGGATTGTTTGATTACGTTGAAGATCATACTTCTGATGGGGTCAAAGTGCGGGTATATTGTCAAGTTGGTAAGGCAGACCAGGGGAAGATTGCTTTGCACGTTGCTGTCAAGACACTTGAATTGTACACAGAATACTTTGCTGTGCCATACCCATTGCCGAAATTGGATATGGTTGCAATACCTGATTTTGCTTTCGGCGCGATGGAGAATTATGGTTTAGTTACATACCGAGAAACAGCTTTGCTTTTTGATGAACAACATTCTGCAGCTGCCAACAAGCAAAGGGTTGCGACTGTCGTGGCACATGAATTGGCACACCAGTGGTTTGGCAATCTTGTAACAATGGAATGGTGGACGCATTTATGGCTGAATGAGGGATTTGCAACATGGGTAAGCTATTTAGCTACTGATAGCTTATTCCCAGAGTGGAAAATATGGACTCAGTTTCTTGATGAAGTCACTACCGGTCTTAAGCTGGATGGGCTTGAAGAATCTCACCCCATTGAGGTTGAGATCAATCATGCTGCTGAGGTTGATGAAATATTTGATGCGATAAGTTATAAAAAAGGTGCTACTGTTATTCGGATGCTACAAAGCTATCTAGGTGCTGAAGTCTTCCAGAGGTCACTTGCTTCATATATCAAAAAGCATGCTTACTCAAATGCAAAGACAGAAGATTTGTGGGCTGCCCTTGAGGAGGGATCTGGTGAACCTGTAAACAAACTAATGAATTCATGGACACAGCAGAAGGGTTACCCGGTTATTTCTGTCAAAGTCAAAGATCAGAAATTGGAGTTTGATCAGGTTTCCTTATGTTTGCCTCTTTCAAAGTTGTTGGTTATCAAATGA

Protein Analysis

338

Amino Acids

38.04

Weight (kDa)

5.05

Isoelectric Point (pI)

23.78

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000648)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 726
AccI GTMKAC 1 cut(s) 140
AccII CGCG 1 cut(s) 365
AciI CCGC 1 cut(s) 214
AclWI GGATC 1 cut(s) 874
AcoI YGGCCR 1 cut(s) 153
AcsI RAATTY 1 cut(s) 895
AcuI CTGAAG 2 cut(s) 125, 795
AfaI GTAC 1 cut(s) 290
AfiI CCNNNNNNNGG 2 cut(s) 670, 862
AflII CTTAAG 1 cut(s) 635
AgeI ACCGGT 1 cut(s) 629
AgsI TTSAA 6 cut(s) 22, 80, 185, 284, 653, 993
AhlI ACTAGT 1 cut(s) 52
AjnI CCWGG 1 cut(s) 243
AleI CACNNNNGTG 1 cut(s) 484
AluBI AGCT 7 cut(s) 404, 434, 561, 569, 579, 640, 762
AluI AGCT 7 cut(s) 404, 434, 561, 569, 579, 640, 762
AlwI GGATC 1 cut(s) 874
AoxI GGCC 1 cut(s) 153
ApeKI GCWGC 4 cut(s) 431, 434, 689, 851
ApoI RAATTY 1 cut(s) 895
ArsI GACNNNNNNTTYG 2 cut(s) 826, 858
AsiGI ACCGGT 1 cut(s) 629
AspLEI GCGC 1 cut(s) 365
AsuC2I CCSGG 1 cut(s) 923
AsuHPI GGTGA 2 cut(s) 653, 884
BalI TGGCCA 1 cut(s) 155
BbsI GAAGAC 2 cut(s) 113, 772
BbvCI CCTCAGC 1 cut(s) 693
BbvI GCAGC 4 cut(s) 421, 443, 676, 838
BccI CCATC 4 cut(s) 29, 194, 361, 638
BciT130I CCWGG 1 cut(s) 245
BclI TGATCA 1 cut(s) 964
BcnI CCSGG 1 cut(s) 923
BcuI ACTAGT 1 cut(s) 52
BfaI CTAG 2 cut(s) 53, 767
BfmI CTRYAG 1 cut(s) 429
BfrI CTTAAG 1 cut(s) 635
BisI GCNGC 4 cut(s) 432, 435, 690, 852
BlsI GCNGC 4 cut(s) 433, 436, 691, 853
Bme1390I CCNGG 2 cut(s) 245, 923
BmrFI CCNGG 2 cut(s) 245, 923
BmsI GCATC 2 cut(s) 703, 741
BpiI GAAGAC 2 cut(s) 113, 772
Bpu10I CCTNAGC 1 cut(s) 693
BpuEI CTTGAG 1 cut(s) 878
BpuMI CCSGG 1 cut(s) 923
BsaJI CCNNGG 1 cut(s) 244
BsaWI WCCGGW 1 cut(s) 629
Bsc4I CCNNNNNNNGG 2 cut(s) 670, 862
Bse118I RCCGGY 1 cut(s) 629
Bse1I ACTGG 1 cut(s) 484
Bse3DI GCAATG 1 cut(s) 317
BseBI CCWGG 1 cut(s) 245
BseDI CCNNGG 1 cut(s) 244
BseGI GGATG 2 cut(s) 649, 756
BseLI CCNNNNNNNGG 2 cut(s) 670, 862
BseMI GCAATG 1 cut(s) 317
BseMII CTCAG 2 cut(s) 620, 684
BseNI ACTGG 1 cut(s) 484
BseRI GAGGAG 1 cut(s) 875
BseXI GCAGC 4 cut(s) 421, 443, 676, 838
Bsh1236I CGCG 1 cut(s) 365
BshFI GGCC 1 cut(s) 155
BshTI ACCGGT 1 cut(s) 629
BsiSI CCGG 2 cut(s) 630, 923
BslI CCNNNNNNNGG 2 cut(s) 670, 862
BsnI GGCC 1 cut(s) 155
Bsp1407I TGTACA 1 cut(s) 288
Bsp143I GATC 5 cut(s) 187, 678, 866, 946, 964
BspACI CCGC 1 cut(s) 214
BspANI GGCC 1 cut(s) 155
BspCNI CTCAG 2 cut(s) 619, 685
BspFNI CGCG 1 cut(s) 365
BspMAI CTGCAG 1 cut(s) 433
BspPI GGATC 1 cut(s) 874
BspTI CTTAAG 1 cut(s) 635
BsrDI GCAATG 1 cut(s) 317
BsrFI RCCGGY 1 cut(s) 629
BsrGI TGTACA 1 cut(s) 288
BsrI ACTGG 1 cut(s) 484
BssAI RCCGGY 1 cut(s) 629
BssECI CCNNGG 1 cut(s) 244
BssMI GATC 5 cut(s) 187, 678, 866, 946, 964
Bst2UI CCWGG 1 cut(s) 245
Bst4CI ACNGT 3 cut(s) 112, 460, 742
BstAFI CTTAAG 1 cut(s) 635
BstAUI TGTACA 1 cut(s) 288
BstC8I GCNNGC 1 cut(s) 816
BstDEI CTNAG 2 cut(s) 606, 693
BstEII GGTNACC 1 cut(s) 917
BstENI CCTNNNNNAGG 1 cut(s) 860
BstF5I GGATG 2 cut(s) 649, 756
BstFNI CGCG 1 cut(s) 365
BstHHI GCGC 1 cut(s) 365
BstKTI GATC 5 cut(s) 190, 681, 869, 949, 967
BstMBI GATC 5 cut(s) 187, 678, 866, 946, 964
BstMWI GCNNNNNNNGC 3 cut(s) 362, 529, 646
BstNI CCWGG 1 cut(s) 245
BstNSI RCATGY 2 cut(s) 73, 818
BstPI GGTNACC 1 cut(s) 917
BstSCI CCNGG 2 cut(s) 243, 921
BstSFI CTRYAG 1 cut(s) 429
BstUI CGCG 1 cut(s) 365
BstV1I GCAGC 4 cut(s) 421, 443, 676, 838
BstV2I GAAGAC 2 cut(s) 113, 772
BstX2I RGATCY 1 cut(s) 866
BstXI CCANNNNNNTGG 1 cut(s) 491
BstYI RGATCY 1 cut(s) 866
BsuRI GGCC 1 cut(s) 155
BtgZI GCGATG 1 cut(s) 380
BtsCI GGATG 2 cut(s) 649, 756
BtsIMutI CAGTG 1 cut(s) 491
Cac8I GCNNGC 1 cut(s) 816
CfoI GCGC 1 cut(s) 365
Cfr10I RCCGGY 1 cut(s) 629
CseI GACGC 1 cut(s) 529
Csp6I GTAC 1 cut(s) 289
CspAI ACCGGT 1 cut(s) 629
CviAII CATG 6 cut(s) 70, 470, 552, 686, 815, 900
CviQI GTAC 1 cut(s) 289
DdeI CTNAG 2 cut(s) 606, 693
DpnI GATC 5 cut(s) 189, 680, 868, 948, 966
DpnII GATC 5 cut(s) 187, 678, 866, 946, 964
EaeI YGGCCR 1 cut(s) 153
Eco57I CTGAAG 2 cut(s) 125, 795
Eco91I GGTNACC 1 cut(s) 917
EcoNI CCTNNNNNAGG 1 cut(s) 860
EcoO65I GGTNACC 1 cut(s) 917
EcoRI GAATTC 1 cut(s) 895
EcoRII CCWGG 1 cut(s) 243
FaeI CATG 6 cut(s) 73, 473, 555, 689, 818, 903
FatI CATG 6 cut(s) 69, 469, 551, 685, 814, 899
FauI CCCGC 1 cut(s) 207
FauNDI CATATG 1 cut(s) 118
FbaI TGATCA 1 cut(s) 964
FblI GTMKAC 1 cut(s) 140
Fnu4HI GCNGC 4 cut(s) 432, 435, 690, 852
FokI GGATG 2 cut(s) 656, 763
Fsp4HI GCNGC 4 cut(s) 432, 435, 690, 852
FspBI CTAG 2 cut(s) 53, 767
GlaI GCGC 1 cut(s) 364
GluI GCNGC 4 cut(s) 432, 435, 690, 852
HaeIII GGCC 1 cut(s) 155
HapII CCGG 2 cut(s) 630, 923
HgaI GACGC 1 cut(s) 529
HhaI GCGC 1 cut(s) 365
Hin1II CATG 6 cut(s) 73, 473, 555, 689, 818, 903
Hin6I GCGC 1 cut(s) 363
HinP1I GCGC 1 cut(s) 363
HinfI GANTC 3 cut(s) 76, 604, 656
HpaII CCGG 2 cut(s) 630, 923
HphI GGTGA 2 cut(s) 653, 884
Hpy166II GTNNAC 6 cut(s) 98, 141, 291, 519, 875, 883
Hpy188I TCNGA 6 cut(s) 49, 105, 167, 199, 750, 951
Hpy188III TCNNGA 5 cut(s) 22, 80, 274, 614, 784
Hpy8I GTNNAC 6 cut(s) 98, 141, 291, 519, 875, 883
HpyAV CCTTC 1 cut(s) 907
HpyCH4III ACNGT 3 cut(s) 112, 460, 742
HpyCH4IV ACGT 2 cut(s) 180, 264
HpyCH4V TGCA 5 cut(s) 262, 341, 431, 548, 830
HpyF10VI GCNNNNNNNGC 3 cut(s) 362, 529, 646
HpyF3I CTNAG 2 cut(s) 606, 693
HpySE526I ACGT 2 cut(s) 180, 264
Hsp92II CATG 6 cut(s) 73, 473, 555, 689, 818, 903
HspAI GCGC 1 cut(s) 363
Ksp22I TGATCA 1 cut(s) 964
Kzo9I GATC 5 cut(s) 187, 678, 866, 946, 964
Lsp1109I GCAGC 4 cut(s) 421, 443, 676, 838
LweI GCATC 2 cut(s) 703, 741
MaeI CTAG 2 cut(s) 53, 767
MaeII ACGT 2 cut(s) 180, 264
MaeIII GTNAC 5 cut(s) 385, 502, 622, 789, 917
MalI GATC 5 cut(s) 189, 680, 868, 948, 966
MboI GATC 5 cut(s) 187, 678, 866, 946, 964
MboII GAAGA 7 cut(s) 95, 118, 197, 262, 665, 772, 851
MflI RGATCY 1 cut(s) 866
MlsI TGGCCA 1 cut(s) 155
MluCI AATT 9 cut(s) 7, 89, 132, 284, 326, 373, 473, 895, 953
MluNI TGGCCA 1 cut(s) 155
MlyI GAGTC 1 cut(s) 598
MmeI TCCRAC 1 cut(s) 145
MnlI CCTC 8 cut(s) 71, 532, 664, 688, 780, 853, 856, 996
Mox20I TGGCCA 1 cut(s) 155
MscI TGGCCA 1 cut(s) 155
MseI TTAA 1 cut(s) 636
MslI CAYNNNNRTG 1 cut(s) 484
Msp20I TGGCCA 1 cut(s) 155
MspA1I CMGCKG 1 cut(s) 434
MspCI CTTAAG 1 cut(s) 635
MspI CCGG 2 cut(s) 630, 923
MspR9I CCNGG 2 cut(s) 245, 923
MvaI CCWGG 1 cut(s) 245
MvnI CGCG 1 cut(s) 365
MwoI GCNNNNNNNGC 3 cut(s) 362, 529, 646
NciI CCSGG 1 cut(s) 923
NdeI CATATG 1 cut(s) 118
NdeII GATC 5 cut(s) 187, 678, 866, 946, 964
NlaIII CATG 6 cut(s) 73, 473, 555, 689, 818, 903
NmuCI GTSAC 2 cut(s) 622, 789
NspI RCATGY 2 cut(s) 73, 818
OliI CACNNNNGTG 1 cut(s) 484
PaeI GCATGC 1 cut(s) 818
PfeI GAWTC 2 cut(s) 76, 656
PinAI ACCGGT 1 cut(s) 629
PkrI GCNGC 4 cut(s) 433, 436, 691, 853
PleI GAGTC 1 cut(s) 598
PpsI GAGTC 1 cut(s) 598
PsiI TTATAA 1 cut(s) 726
Psp6I CCWGG 1 cut(s) 243
PspEI GGTNACC 1 cut(s) 917
PspGI CCWGG 1 cut(s) 243
PstI CTGCAG 1 cut(s) 433
PsuI RGATCY 1 cut(s) 866
PvuII CAGCTG 1 cut(s) 434
RsaI GTAC 1 cut(s) 290
RsaNI GTAC 1 cut(s) 289
RseI CAYNNNNRTG 1 cut(s) 484
SaqAI TTAA 1 cut(s) 636
SatI GCNGC 4 cut(s) 432, 435, 690, 852
Sau3AI GATC 5 cut(s) 187, 678, 866, 946, 964
SchI GAGTC 1 cut(s) 598
ScrFI CCNGG 2 cut(s) 245, 923
SfaNI GCATC 2 cut(s) 703, 741
SfcI CTRYAG 1 cut(s) 429
SmiMI CAYNNNNRTG 1 cut(s) 484
SmlI CTYRAG 2 cut(s) 635, 857
SmoI CTYRAG 2 cut(s) 635, 857
SpeI ACTAGT 1 cut(s) 52
SphI GCATGC 1 cut(s) 818
Sse9I AATT 9 cut(s) 7, 89, 132, 284, 326, 373, 473, 895, 953
SsiI CCGC 1 cut(s) 214
SspI AATATT 1 cut(s) 708
SspMI CTAG 2 cut(s) 53, 767
StyD4I CCNGG 2 cut(s) 243, 921
TaaI ACNGT 3 cut(s) 112, 460, 742
TaiI ACGT 2 cut(s) 183, 267
TasI AATT 9 cut(s) 7, 89, 132, 284, 326, 373, 473, 895, 953
TatI WGTACW 1 cut(s) 288
TfiI GAWTC 2 cut(s) 76, 656
Tru1I TTAA 1 cut(s) 636
Tru9I TTAA 1 cut(s) 636
TscAI CASTG 1 cut(s) 491
TseFI GTSAC 2 cut(s) 622, 789
TseI GCWGC 4 cut(s) 431, 434, 689, 851
Tsp45I GTSAC 2 cut(s) 622, 789
TspDTI ATGAA 8 cut(s) 105, 432, 486, 633, 717, 789, 888, 908
TspGWI ACGGA 1 cut(s) 33
TspRI CASTG 1 cut(s) 491
Vha464I CTTAAG 1 cut(s) 635
XagI CCTNNNNNAGG 1 cut(s) 860
XapI RAATTY 1 cut(s) 895
XceI RCATGY 2 cut(s) 73, 818
XmiI GTMKAC 1 cut(s) 140
XspI CTAG 2 cut(s) 53, 767
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.