Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0000542

Physical Location & Seq

Genomic Coordinates Reverse (-)

25841555 .. 25846802

Gene Structure 5248 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g35270.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1842 bp

ATGTTCTACTCTCACAGCCTCCTCGCTCGCAAAGAGCCGCTCGGCCAAATCTGGATGGCCGCGACGATGCATGCCAAGATGAACCGGAGAAATCTCAACCAGCTAGACCTCATCCGAATCTGCGAGGAGATTCTGAACCCGAGAGCTCCTATGGCTCTCCGACTCTCCAGTATTCTCATGGGTGGAGTCGTCATCGTCTATGAACGTAAAGTGAAGCTTCTATTTGATGATGTGCACCGTCTCCTGGATCAATTAAACGAAGCATGGAAGAAGGTGAAACCCAACTCCGACTCCACTGTCCTCCCCAAACGGCGAGCTCAGGCCAAGAAAGAAGCGATTACTCTGCCAGAGCATGAAGAAACAGATGTTGGGGGTGTCATTGACATCGAGCAGTTCCTTGATTTCTCTCACCATGCCACGCTCTTCCAGCAGCAAACCGGCTATTTCCTCATGCAACTGGATAGCGTAGATGTGGGAGAACCACTTCACGATAATGCAGCAGAGGGAGATCAACATCAGAACTTACATCAAGCTGATCTTGAGGATATCACATTGCCTAAACGTTATGATCCATCAGATGCACATGCAGATCTGTTCAACCGTCACTATGAGAGATTTGAAATTGAGGGAGATGACTTAGACTTCACATCCGGAGAGCCCACACATATGCGGCCACCTTCTCCAATTAATCCAATACCTTCTCCACCTTGCCAAGACCAGCGTCAGGATGGACATCAGCCTGATAATGTGTTTGATGAAATGGTGCGGATGCAGGACGTTCAAGAGAATGCTCAACAAAGGCAGAGGCCTAAAAGGAGTAGAAAGAGAAAATCACCAGCCTCTGTAATGGATAATGACCAAACAGTTCATCCTGCTCATGTGTACCAGTCTTGGCTTCAAGATGCTTCAGATATAGTTTCAAAAAGACGAAGAAATCAAAAGCCCAAGAATATAATTTCTGCTATGAAGATTGGTAAACTCATGGAGCAGCCAGTTAGCGTTCTCATGGGCCATTTATTCAAACCTGGAAGTGGAGAAACATATTATCCAGCTCCTCTCTTAGAGCTATTCAAGGAAAAACCTACCCATGACTCACCTGCATCCACCTCTCGACCTCTGCCTCCAGAACCACCGTCATGGTCACCACCTGGAAGACAAACATATCAAGAACTGCCTGTTGAAGATCTTCATAGTGGAGGTGGCTCCCAGTCGTTTGTAACTCCCACAGAACAGCTACGGACAAATTTATTTGACAATGATGTACCACCACCTGACATCATGAATGAACTGAGAGCCAATCTTAATGGCATGAGAGGAACTGATAGCAACTTGGCAACACCAAGAAATTCTGGAGACGAAAGAAGATCTGTCCTGAGCTCCTCCTCTGGAAAGGGAGTTAACAAAAACAGTTCAGAAGTGGATTCAGGACGGAAAAGACGTTATTCATCTAAACATAGCAATGATGGACTTGAACCAGTGTCAGAGGACAGTGGATTTCATCACCCTGATCCAAACTGCAAGGTATCAGAATTATCTGGAAAAGGCCCAACTCCTGAGCAAGAACTGTTGATGGAAACTGGACCGACCCAAACACAACAACCTATCATCAATCAGCCACTGGAAAAAGTGACTGATGCAATTCGAATGGAGTTGAAATCCCATTTTGAAATACTGGGTGGCCCTCAAGTGGAATCCCTGAACAACCTGACAGCTGGAATGAATCGAAAAGGAGCGGCTATGCTTTTCTATCAAACTTGTGTTCTTGCTACTCGTAATTTCATAAAAGTTGACCAAAGCGCCCCTTATGAGGATATCCTGATCACTAGAGGACCAAATATGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000228 GO:0000280 GO:0000793 GO:0000794 GO:0000798 GO:0000819 GO:0003674 GO:0003682 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0006139 GO:0006259 GO:0006281 GO:0006302 GO:0006323 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007049 GO:0007059 GO:0007062 GO:0007127 GO:0007135 GO:0008150 GO:0008152 GO:0008278 GO:0008608 GO:0009987 GO:0010032 GO:0016043 GO:0022402 GO:0022414 GO:0030261 GO:0031974 GO:0031981 GO:0032991 GO:0033554 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0045132 GO:0045143 GO:0045144 GO:0046483 GO:0048285 GO:0050896 GO:0051177 GO:0051276 GO:0051316 GO:0051321 GO:0051455 GO:0051716 GO:0051754 GO:0061982 GO:0061983 GO:0070013 GO:0070192 GO:0070601 GO:0071103 GO:0071704 GO:0071840 GO:0090304 GO:0098813 GO:0140013 GO:1901360 GO:1903046

KEGG Pathways

Metabolic & Signaling

ko04110 ko04111 map04110 map04111

Pfam Domains

Protein Families

Rad21_Rec8 Rad21_Rec8_N

Protein Analysis

614

Amino Acids

69.08

Weight (kDa)

5.96

Isoelectric Point (pI)

55.97

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Rad21_Rec8_N	PF04825	1 - 106	4.5e-31	N terminus of Rad21 / Rec8 like protein
Rad21_Rec8	PF04824	561 - 613	1e-20	Conserved region of Rad21 / Rec8 like protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000542)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G05490 AT5G05490
fragaria_vesca	FvH4_5g27761 FvH4_5g31060 FvH4_5g35270
malus_domestica	MD12G1179600.v1.1
prunus_persica	Prupe.2G254800_v2.0.a1 Prupe.2G254800_v2.0.a1
pyrus_communis	pycom12g16940
rosa_chinensis	RchiOBHm_Chr0c11g0499361 RchiOBHm_Chr0c11g0499371 RchiOBHm_Chr0c11g0499561 RchiOBHm_Chr0c11g0499571 RchiOBHm_Chr0c11g0499581 RchiOBHm_Chr5g0049691 RchiOBHm_Chr5g0049701 RchiOBHm_Chr7g0230591 RchiOBHm_Chr7g0230601 RchiOBHm_Chr7g0231161 RchiOBHm_Chr7g0231171 RchiOBHm_Chr7g0231181 RchiOBHm_Chr7g0236141 RchiOBHm_Chr7g0236431 RchiOBHm_Chr7g0236461 RchiOBHm_Chr7g0236501
rosa_laevigata	RLG00000001078 RLG00000001102 RLG00000001195 RLG00000001205 RLG00000001937 RLG00000030015 RLG00000030017
rosa_multiflora	Rmu_co8170892.1_g000001 Rmu_co8276489.1_g000001 Rmu_sc0000112.1_g000006 Rmu_sc0000768.1_g000037 Rmu_sc0002222.1_g000015 Rmu_sc0002449.1_g000012 Rmu_sc0002449.1_g000029 Rmu_sc0002905.1_g000001 Rmu_sc0003720.1_g000008 Rmu_sc0005578.1_g000004 Rmu_sc0010974.1_g000001 Rmu_sc0010983.1_g000001
rosa_roxburghii	Rroxscaffold_3G00225060 Rroxscaffold_3G00225070 Rroxscaffold_3G00225350 Rroxscaffold_3G00226600 Rroxscaffold_3G00229860
rosa_rugosa	Rorug07G0294500 Rorug07G0294600 Rorug07G0295300 Rorug07G0297000
rosa_samantha	Rh1AG102400 Rh5BG337600 Rh5DG349800 Rh7AG413200 Rh7AG440900 Rh7AG448200 Rh7AG448700 Rh7AG449500 Rh7AG451400 Rh7AG452700 Rh7AG452800 Rh7AG453000 Rh7AG453100 Rh7CG431600 Rh7CG432100 Rh7CG453400 Rh7CG469500 Rh7CG471500 Rh7DG368200 Rh7DG409000 Rh7DG430700 Rh7DG438900 Rh7DG440800
rosa_wichuraiana	Rw1G008170 Rw7G034070 Rw7G036650 Rw7G036670 Rw7G036710 Rw7G037350 Rw7G037530 Rw7G037600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1105
AasI	GACNNNNNNGTC	1 cut(s)	296
Acc36I	ACCTGC	1 cut(s)	1105
AccBSI	CCGCTC	2 cut(s)	40, 1733
AccII	CGCG	1 cut(s)	62
AccIII	TCCGGA	1 cut(s)	650
AciI	CCGC	5 cut(s)	38, 60, 670, 766, 1733
AclI	AACGTT	1 cut(s)	562
AclWI	GGATC	3 cut(s)	255, 563, 1502
AcoI	YGGCCR	3 cut(s)	43, 57, 671
AcsI	RAATTY	2 cut(s)	1243, 1345
AcuI	CTGAAG	1 cut(s)	891
AfaI	GTAC	2 cut(s)	884, 1263
AfiI	CCNNNNNNNGG	5 cut(s)	244, 724, 1031, 1687, 1807
AjnI	CCWGG	3 cut(s)	243, 1024, 1147
AjuI	GAANNNNNNNTTGG	2 cut(s)	351, 383
Alw21I	GWGCWC	4 cut(s)	148, 237, 319, 1379
Alw26I	GTCTC	2 cut(s)	245, 1347
Alw44I	GTGCAC	1 cut(s)	233
AlwI	GGATC	3 cut(s)	255, 563, 1502
AlwNI	CAGNNNCTG	2 cut(s)	842, 1618
Ama87I	CYCGRG	1 cut(s)	139
Aor13HI	TCCGGA	1 cut(s)	650
AoxI	GGCC	8 cut(s)	43, 57, 321, 671, 806, 1009, 1543, 1678
ApaLI	GTGCAC	1 cut(s)	233
ApeKI	GCWGC	3 cut(s)	430, 497, 988
ApoI	RAATTY	2 cut(s)	1243, 1345
AseI	ATTAAT	1 cut(s)	687
Asp700I	GAANNNNTTC	2 cut(s)	483, 1185
AspLEI	GCGC	1 cut(s)	1799
AspS9I	GGNCC	5 cut(s)	1009, 1544, 1580, 1679, 1829
AsuHPI	GGTGA	6 cut(s)	286, 401, 825, 1086, 1134, 1493
AsuII	TTCGAA	1 cut(s)	1642
AvaI	CYCGRG	1 cut(s)	139
AvaII	GGWCC	2 cut(s)	1580, 1829
BaeGI	GKGCMC	1 cut(s)	237
BanII	GRGCYC	4 cut(s)	148, 319, 660, 1379
BbsI	GAAGAC	1 cut(s)	1159
Bbv12I	GWGCWC	4 cut(s)	148, 237, 319, 1379
BbvI	GCAGC	3 cut(s)	442, 509, 1000
BccI	CCATC	5 cut(s)	49, 580, 722, 1457, 1564
BceAI	ACGGC	1 cut(s)	326
BcgI	CGANNNNNNTGC	2 cut(s)	325, 359
BciT130I	CCWGG	3 cut(s)	245, 1026, 1149
BclI	TGATCA	1 cut(s)	1818
BcoDI	GTCTC	2 cut(s)	245, 1347
BfaI	CTAG	2 cut(s)	104, 1824
BfoI	RGCGCY	1 cut(s)	1800
BfuAI	ACCTGC	1 cut(s)	1105
BglII	AGATCT	3 cut(s)	589, 1183, 1364
BisI	GCNGC	7 cut(s)	38, 60, 431, 498, 671, 989, 1734
BlsI	GCNGC	7 cut(s)	39, 61, 432, 499, 672, 990, 1735
Bme1390I	CCNGG	3 cut(s)	245, 1026, 1149
Bme18I	GGWCC	2 cut(s)	1580, 1829
BmeT110I	CYCGRG	1 cut(s)	139
BmgT120I	GGNCC	5 cut(s)	1009, 1544, 1580, 1679, 1829
BmiI	GGNNCC	1 cut(s)	1204
BmrFI	CCNGG	3 cut(s)	245, 1026, 1149
BmrI	ACTGGG	2 cut(s)	1201, 1682
BmsI	GCATC	6 cut(s)	57, 568, 759, 892, 1109, 1624
BmuI	ACTGGG	2 cut(s)	1201, 1682
BoxI	GACNNNNGTC	1 cut(s)	720
BpiI	GAAGAC	1 cut(s)	1159
BpmI	CTGGAG	3 cut(s)	151, 1107, 1371
Bpu10I	CCTNAGC	3 cut(s)	318, 1373, 1554
Bpu14I	TTCGAA	1 cut(s)	1642
BpuEI	CTTGAG	2 cut(s)	560, 1668
BsaBI	GATNNNNATC	2 cut(s)	513, 732
BsaWI	WCCGGW	2 cut(s)	84, 650
BsaXI	ACNNNNNCTCC	2 cut(s)	275, 305
Bsc4I	CCNNNNNNNGG	5 cut(s)	244, 724, 1031, 1687, 1807
Bse118I	RCCGGY	1 cut(s)	437
Bse1I	ACTGG	9 cut(s)	168, 462, 886, 992, 1207, 1475, 1582, 1623, 1677
Bse3DI	GCAATG	2 cut(s)	551, 1465
Bse8I	GATNNNNATC	2 cut(s)	513, 732
BseAI	TCCGGA	1 cut(s)	650
BseBI	CCWGG	3 cut(s)	245, 1026, 1149
BseGI	GGATG	7 cut(s)	60, 111, 647, 733, 774, 868, 1100
BseJI	GATNNNNATC	2 cut(s)	513, 732
BseLI	CCNNNNNNNGG	5 cut(s)	244, 724, 1031, 1687, 1807
BseMI	GCAATG	2 cut(s)	551, 1465
BseMII	CTCAG	4 cut(s)	332, 1280, 1364, 1545
BseNI	ACTGG	9 cut(s)	168, 462, 886, 992, 1207, 1475, 1582, 1623, 1677
BseRI	GAGGAG	5 cut(s)	11, 140, 1044, 1369, 1372
BseSI	GKGCMC	1 cut(s)	237
BseXI	GCAGC	3 cut(s)	442, 509, 1000
Bsh1236I	CGCG	1 cut(s)	62
BshFI	GGCC	8 cut(s)	45, 59, 323, 673, 808, 1011, 1545, 1680
BsiHKAI	GWGCWC	4 cut(s)	148, 237, 319, 1379
BsiHKCI	CYCGRG	1 cut(s)	139
BsiSI	CCGG	3 cut(s)	85, 438, 651
BslI	CCNNNNNNNGG	5 cut(s)	244, 724, 1031, 1687, 1807
BsmAI	GTCTC	2 cut(s)	245, 1347
BsmBI	CGTCTC	2 cut(s)	245, 1347
BsmI	GAATGC	1 cut(s)	793
BsnI	GGCC	8 cut(s)	45, 59, 323, 673, 808, 1011, 1545, 1680
BsoBI	CYCGRG	1 cut(s)	139
Bsp119I	TTCGAA	1 cut(s)	1642
Bsp1286I	GDGCHC	5 cut(s)	148, 237, 319, 660, 1379
Bsp13I	TCCGGA	1 cut(s)	650
Bsp143I	GATC	9 cut(s)	247, 508, 535, 568, 589, 1183, 1364, 1507, 1818
BspACI	CCGC	5 cut(s)	38, 60, 670, 766, 1733
BspANI	GGCC	8 cut(s)	45, 59, 323, 673, 808, 1011, 1545, 1680
BspCNI	CTCAG	4 cut(s)	331, 1281, 1365, 1546
BspEI	TCCGGA	1 cut(s)	650
BspFNI	CGCG	1 cut(s)	62
BspHI	TCATGA	1 cut(s)	1278
BspLI	GGNNCC	1 cut(s)	1204
BspMI	ACCTGC	1 cut(s)	1105
BspPI	GGATC	3 cut(s)	255, 563, 1502
BspQI	GCTCTTC	1 cut(s)	428
BspT104I	TTCGAA	1 cut(s)	1642
BsrBI	CCGCTC	2 cut(s)	40, 1733
BsrDI	GCAATG	2 cut(s)	551, 1465
BsrFI	RCCGGY	1 cut(s)	437
BsrI	ACTGG	9 cut(s)	168, 462, 886, 992, 1207, 1475, 1582, 1623, 1677
BssAI	RCCGGY	1 cut(s)	437
BssMI	GATC	9 cut(s)	247, 508, 535, 568, 589, 1183, 1364, 1507, 1818
Bst2UI	CCWGG	3 cut(s)	245, 1026, 1149
Bst4CI	ACNGT	8 cut(s)	239, 298, 602, 865, 1134, 1409, 1490, 1566
Bst6I	CTCTTC	1 cut(s)	428
BstBI	TTCGAA	1 cut(s)	1642
BstC8I	GCNNGC	3 cut(s)	28, 72, 315
BstDEI	CTNAG	6 cut(s)	318, 637, 1060, 1289, 1373, 1554
BstEII	GGTNACC	1 cut(s)	1140
BstF5I	GGATG	7 cut(s)	60, 111, 647, 733, 774, 868, 1100
BstFNI	CGCG	1 cut(s)	62
BstH2I	RGCGCY	1 cut(s)	1800
BstHHI	GCGC	1 cut(s)	1799
BstKTI	GATC	9 cut(s)	250, 511, 538, 571, 592, 1186, 1367, 1510, 1821
BstMAI	GTCTC	2 cut(s)	245, 1347
BstMBI	GATC	9 cut(s)	247, 508, 535, 568, 589, 1183, 1364, 1507, 1818
BstMWI	GCNNNNNNNGC	2 cut(s)	152, 427
BstNI	CCWGG	3 cut(s)	245, 1026, 1149
BstNSI	RCATGY	2 cut(s)	74, 587
BstPAI	GACNNNNGTC	1 cut(s)	720
BstPI	GGTNACC	1 cut(s)	1140
BstSCI	CCNGG	3 cut(s)	243, 1024, 1147
BstSLI	GKGCMC	1 cut(s)	237
BstUI	CGCG	1 cut(s)	62
BstV1I	GCAGC	3 cut(s)	442, 509, 1000
BstV2I	GAAGAC	1 cut(s)	1159
BstX2I	RGATCY	3 cut(s)	589, 1183, 1364
BstXI	CCANNNNNNTGG	1 cut(s)	1137
BstYI	RGATCY	3 cut(s)	589, 1183, 1364
BsuRI	GGCC	8 cut(s)	45, 59, 323, 673, 808, 1011, 1545, 1680
BtsCI	GGATG	7 cut(s)	60, 111, 647, 733, 774, 868, 1100
BtsIMutI	CAGTG	4 cut(s)	294, 1482, 1495, 1616
BveI	ACCTGC	1 cut(s)	1105
Cac8I	GCNNGC	3 cut(s)	28, 72, 315
CaiI	CAGNNNCTG	2 cut(s)	842, 1618
CciI	TCATGA	1 cut(s)	1278
CfoI	GCGC	1 cut(s)	1799
Cfr10I	RCCGGY	1 cut(s)	437
Cfr13I	GGNCC	5 cut(s)	1009, 1544, 1580, 1679, 1829
CseI	GACGC	1 cut(s)	710
Csp6I	GTAC	2 cut(s)	883, 1262
CviQI	GTAC	2 cut(s)	883, 1262
DdeI	CTNAG	6 cut(s)	318, 637, 1060, 1289, 1373, 1554
DpnI	GATC	9 cut(s)	249, 510, 537, 570, 591, 1185, 1366, 1509, 1820
DpnII	GATC	9 cut(s)	247, 508, 535, 568, 589, 1183, 1364, 1507, 1818
DrdI	GACNNNNNNGTC	1 cut(s)	296
DseDI	GACNNNNNNGTC	1 cut(s)	296
EaeI	YGGCCR	3 cut(s)	43, 57, 671
Eam1104I	CTCTTC	1 cut(s)	428
EarI	CTCTTC	1 cut(s)	428
Ecl136II	GAGCTC	3 cut(s)	146, 317, 1377
Eco147I	AGGCCT	1 cut(s)	808
Eco24I	GRGCYC	4 cut(s)	148, 319, 660, 1379
Eco32I	GATATC	2 cut(s)	547, 1813
Eco47I	GGWCC	2 cut(s)	1580, 1829
Eco53kI	GAGCTC	3 cut(s)	146, 317, 1377
Eco57I	CTGAAG	1 cut(s)	891
Eco88I	CYCGRG	1 cut(s)	139
Eco91I	GGTNACC	1 cut(s)	1140
EcoICRI	GAGCTC	3 cut(s)	146, 317, 1377
EcoO65I	GGTNACC	1 cut(s)	1140
EcoRII	CCWGG	3 cut(s)	243, 1024, 1147
EcoRV	GATATC	2 cut(s)	547, 1813
EcoT22I	ATGCAT	1 cut(s)	72
EcoT38I	GRGCYC	4 cut(s)	148, 319, 660, 1379
Esp3I	CGTCTC	2 cut(s)	245, 1347
FalI	AAGNNNNNCTT	6 cut(s)	201, 233, 522, 554, 1786, 1818
FauNDI	CATATG	1 cut(s)	666
FbaI	TGATCA	1 cut(s)	1818
Fnu4HI	GCNGC	7 cut(s)	38, 60, 431, 498, 671, 989, 1734
FokI	GGATG	7 cut(s)	67, 98, 634, 740, 781, 855, 1087
FriOI	GRGCYC	4 cut(s)	148, 319, 660, 1379
Fsp4HI	GCNGC	7 cut(s)	38, 60, 431, 498, 671, 989, 1734
FspBI	CTAG	2 cut(s)	104, 1824
GlaI	GCGC	1 cut(s)	1798
GluI	GCNGC	7 cut(s)	38, 60, 431, 498, 671, 989, 1734
GsuI	CTGGAG	3 cut(s)	151, 1107, 1371
HaeII	RGCGCY	1 cut(s)	1800
HaeIII	GGCC	8 cut(s)	45, 59, 323, 673, 808, 1011, 1545, 1680
HapII	CCGG	3 cut(s)	85, 438, 651
HgaI	GACGC	1 cut(s)	710
HhaI	GCGC	1 cut(s)	1799
Hin6I	GCGC	1 cut(s)	1797
HinP1I	GCGC	1 cut(s)	1797
HincII	GTYRAC	2 cut(s)	1399, 1789
HindII	GTYRAC	2 cut(s)	1399, 1789
HindIII	AAGCTT	1 cut(s)	215
HinfI	GANTC	9 cut(s)	117, 130, 162, 186, 290, 1091, 1421, 1691, 1720
HpaI	GTTAAC	1 cut(s)	1399
HpaII	CCGG	3 cut(s)	85, 438, 651
HphI	GGTGA	6 cut(s)	286, 401, 825, 1086, 1134, 1493
Hpy166II	GTNNAC	5 cut(s)	235, 883, 977, 1399, 1789
Hpy8I	GTNNAC	5 cut(s)	235, 883, 977, 1399, 1789
Hpy99I	CGWCG	1 cut(s)	67
HpyAV	CCTTC	3 cut(s)	265, 687, 708
HpyCH4III	ACNGT	8 cut(s)	239, 298, 602, 865, 1134, 1409, 1490, 1566
HpyCH4IV	ACGT	4 cut(s)	205, 562, 777, 1438
HpyF10VI	GCNNNNNNNGC	2 cut(s)	152, 427
HpyF3I	CTNAG	6 cut(s)	318, 637, 1060, 1289, 1373, 1554
HpySE526I	ACGT	4 cut(s)	205, 562, 777, 1438
HspAI	GCGC	1 cut(s)	1797
Kpn2I	TCCGGA	1 cut(s)	650
Ksp22I	TGATCA	1 cut(s)	1818
KspAI	GTTAAC	1 cut(s)	1399
Kzo9I	GATC	9 cut(s)	247, 508, 535, 568, 589, 1183, 1364, 1507, 1818
LguI	GCTCTTC	1 cut(s)	428
LmnI	GCTCC	6 cut(s)	151, 985, 1057, 1208, 1382, 1730
Lsp1109I	GCAGC	3 cut(s)	442, 509, 1000
LweI	GCATC	6 cut(s)	57, 568, 759, 892, 1109, 1624
MaeI	CTAG	2 cut(s)	104, 1824
MaeII	ACGT	4 cut(s)	205, 562, 777, 1438
MaeIII	GTNAC	4 cut(s)	602, 1140, 1216, 1627
MalI	GATC	9 cut(s)	249, 510, 537, 570, 591, 1185, 1366, 1509, 1820
MbiI	CCGCTC	2 cut(s)	40, 1733
MboI	GATC	9 cut(s)	247, 508, 535, 568, 589, 1183, 1364, 1507, 1818
MboII	GAAGA	9 cut(s)	280, 368, 415, 942, 979, 1164, 1178, 1193, 1374
MflI	RGATCY	3 cut(s)	589, 1183, 1364
MhlI	GDGCHC	5 cut(s)	148, 237, 319, 660, 1379
MluCI	AATT	9 cut(s)	251, 621, 684, 954, 1243, 1345, 1529, 1638, 1774
MlyI	GAGTC	4 cut(s)	156, 195, 284, 1085
MmeI	TCCRAC	2 cut(s)	184, 312
Mph1103I	ATGCAT	1 cut(s)	72
MroI	TCCGGA	1 cut(s)	650
MroXI	GAANNNNTTC	2 cut(s)	483, 1185
MseI	TTAA	4 cut(s)	254, 687, 1302, 1398
MslI	CAYNNNNRTG	4 cut(s)	492, 665, 1135, 1458
MspA1I	CMGCKG	1 cut(s)	1712
MspI	CCGG	3 cut(s)	85, 438, 651
MspR9I	CCNGG	3 cut(s)	245, 1026, 1149
Mva1269I	GAATGC	1 cut(s)	793
MvaI	CCWGG	3 cut(s)	245, 1026, 1149
MvnI	CGCG	1 cut(s)	62
MwoI	GCNNNNNNNGC	2 cut(s)	152, 427
NdeI	CATATG	1 cut(s)	666
NdeII	GATC	9 cut(s)	247, 508, 535, 568, 589, 1183, 1364, 1507, 1818
NlaIV	GGNNCC	1 cut(s)	1204
NmeAIII	GCCGAG	1 cut(s)	21
NmuCI	GTSAC	3 cut(s)	602, 1140, 1627
NsiI	ATGCAT	1 cut(s)	72
NspI	RCATGY	2 cut(s)	74, 587
NspV	TTCGAA	1 cut(s)	1642
PaeI	GCATGC	1 cut(s)	74
PagI	TCATGA	1 cut(s)	1278
PaqCI	CACCTGC	1 cut(s)	1105
PceI	AGGCCT	1 cut(s)	808
PciSI	GCTCTTC	1 cut(s)	428
PcsI	WCGNNNNNNNCGW	1 cut(s)	1435
PctI	GAATGC	1 cut(s)	793
PdmI	GAANNNNTTC	2 cut(s)	483, 1185
PfeI	GAWTC	5 cut(s)	117, 130, 1421, 1691, 1720
PfoI	TCCNGGA	1 cut(s)	243
PkrI	GCNGC	7 cut(s)	39, 61, 432, 499, 672, 990, 1735
PleI	GAGTC	4 cut(s)	156, 194, 284, 1085
PpsI	GAGTC	4 cut(s)	156, 194, 284, 1085
PshAI	GACNNNNGTC	1 cut(s)	720
PshBI	ATTAAT	1 cut(s)	687
Psp124BI	GAGCTC	3 cut(s)	148, 319, 1379
Psp1406I	AACGTT	1 cut(s)	562
Psp6I	CCWGG	3 cut(s)	243, 1024, 1147
PspEI	GGTNACC	1 cut(s)	1140
PspGI	CCWGG	3 cut(s)	243, 1024, 1147
PspN4I	GGNNCC	1 cut(s)	1204
PspPI	GGNCC	5 cut(s)	1009, 1544, 1580, 1679, 1829
PstNI	CAGNNNCTG	2 cut(s)	842, 1618
PsuI	RGATCY	3 cut(s)	589, 1183, 1364
PvuII	CAGCTG	1 cut(s)	1712
RsaI	GTAC	2 cut(s)	884, 1263
RsaNI	GTAC	2 cut(s)	883, 1262
RseI	CAYNNNNRTG	4 cut(s)	492, 665, 1135, 1458
SacI	GAGCTC	3 cut(s)	148, 319, 1379
SapI	GCTCTTC	1 cut(s)	428
SaqAI	TTAA	4 cut(s)	254, 687, 1302, 1398
SatI	GCNGC	7 cut(s)	38, 60, 431, 498, 671, 989, 1734
Sau3AI	GATC	9 cut(s)	247, 508, 535, 568, 589, 1183, 1364, 1507, 1818
Sau96I	GGNCC	5 cut(s)	1009, 1544, 1580, 1679, 1829
SchI	GAGTC	4 cut(s)	156, 195, 284, 1085
ScrFI	CCNGG	3 cut(s)	245, 1026, 1149
SduI	GDGCHC	5 cut(s)	148, 237, 319, 660, 1379
SfaNI	GCATC	6 cut(s)	57, 568, 759, 892, 1109, 1624
SfuI	TTCGAA	1 cut(s)	1642
SinI	GGWCC	2 cut(s)	1580, 1829
SmiMI	CAYNNNNRTG	4 cut(s)	492, 665, 1135, 1458
SmlI	CTYRAG	2 cut(s)	539, 1683
SmoI	CTYRAG	2 cut(s)	539, 1683
SphI	GCATGC	1 cut(s)	74
Sse9I	AATT	9 cut(s)	251, 621, 684, 954, 1243, 1345, 1529, 1638, 1774
SseBI	AGGCCT	1 cut(s)	808
SsiI	CCGC	5 cut(s)	38, 60, 670, 766, 1733
SspMI	CTAG	2 cut(s)	104, 1824
SstI	GAGCTC	3 cut(s)	148, 319, 1379
StuI	AGGCCT	1 cut(s)	808
StyD4I	CCNGG	3 cut(s)	243, 1024, 1147
TaaI	ACNGT	8 cut(s)	239, 298, 602, 865, 1134, 1409, 1490, 1566
TaiI	ACGT	4 cut(s)	208, 565, 780, 1441
TaqI	TCGA	4 cut(s)	387, 1111, 1642, 1723
TaqII	GACCGA	1 cut(s)	1597
TasI	AATT	9 cut(s)	251, 621, 684, 954, 1243, 1345, 1529, 1638, 1774
TauI	GCSGC	4 cut(s)	40, 62, 673, 1736
TfiI	GAWTC	5 cut(s)	117, 130, 1421, 1691, 1720
Tru1I	TTAA	4 cut(s)	254, 687, 1302, 1398
Tru9I	TTAA	4 cut(s)	254, 687, 1302, 1398
TscAI	CASTG	4 cut(s)	301, 1482, 1495, 1623
TseFI	GTSAC	3 cut(s)	602, 1140, 1627
TseI	GCWGC	3 cut(s)	430, 497, 988
Tsp45I	GTSAC	3 cut(s)	602, 1140, 1627
TspGWI	ACGGA	2 cut(s)	1252, 1444
TspRI	CASTG	4 cut(s)	301, 1482, 1495, 1623
VneI	GTGCAC	1 cut(s)	233
VpaK11BI	GGWCC	2 cut(s)	1580, 1829
VspI	ATTAAT	1 cut(s)	687
XapI	RAATTY	2 cut(s)	1243, 1345
XceI	RCATGY	2 cut(s)	74, 587
XcmI	CCANNNNNNNNNTGG	2 cut(s)	175, 725
XmnI	GAANNNNTTC	2 cut(s)	483, 1185
XspI	CTAG	2 cut(s)	104, 1824
Zsp2I	ATGCAT	1 cut(s)	72

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.