Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr12

Orthogroup ID

OG0000542

Physical Location & Seq

Genomic Coordinates Forward (+)

19228242 .. 19230744

Gene Structure 2503 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom12g16940.7

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1293 bp

ATGGTCTTACATGTTTTCTATGTGGATGGAAGATTTGAGATCGAAGGGGATGAAGAGACACAGTTTAACTTCACGTCAGGAGAGCACACACACATTCACATACCCCCTTCACCTCCTCGCGATGAATATCAGGAAGGGCCTCCTGCAGCTGATACAATCCAAGATGATCAACATCCAGATCACCAGGCCAATCAGCCATATGAAAGCAAGGAATTTAGACAGATGAAGCTGGTTCAAGAGAGACAGGGGACTAGAAAAAGGAAAACAAGAAAGCAAGCATCTGGAATGGATTTTGAACAAACAATCATTCCTGGTCATGTATATCAATCTTGGCTCCAAGATCCTTCAGATCTATCACGAGATGCAAGAAAATGGAAGCGCAAAGATGTAATGGCAACTATGAAGATAGCTAACCTCATGGACCTGCCACCTAAAGTACTAATGGAAGATTTATTTACAACTGGAAGTAAAAACGTATATTATCCACGTCCTCTCCTTGACATGTGGATGAAAAGTGTCCCAACTCCCCATGAGTCTTCTGCTGGACGAACCTCTTCACCCCTGCCCCAAGGACCATTGTCACCAATACCGCCTGAGAGACAAAACTTTGATGGTCCGATGGGATATCCTTTTCAAGATTTTCATAGTGGAGTTGGCTCCCAGTCTTCCATAGATAAGCAAAGGCCAAGTTCTGGTGTGACAAAAGGCAAGAATGACCCAGCAAGTGTATTCATGGATGGACTGACAGCTAACCTTAAGAACATTGGCTTAGCAGGAAATGATACTAATCCAATGGTCACGCCTGGAAATTCTGATGACGTAAGATCCATCCCGAGCTCAGCATCAGGGCAGGCAATTCCTTCAGAAGGCAATTCAGGACGATCCGGCAAGAAAAGGCCTCATTCAGCATCCGGGGGCAACATTAGACTTGAACCACTATTGGAAATGAGTCACCCCGATGTACATTTCGAGTTGTCGAGGTCACCTGAGCAAGGCCCGGCATTTGATCAAGAACTCTTGGTGGAAACAGGACCAACTCAAACTCAAAAACCGATCATGGAACAACCGCTTGACAAAACAACCGATACTATCAGAAGGGTTCTGAAATCACATTTTGAGACGGAGGGAGCTCCTCGGGTCGAATCCCTGGACAACCTAACTGCAGGAAGGAACCGGAAAGAAGCAGCTATGCTATTCTACAAAACTTGTGTTCTGGCTACCCGGGATGTCATAAGAGTCGAACAGAGGACCGCTTACGGGGAGATTCTCATATCGAGAGGGCCGAAAATGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000228 GO:0000280 GO:0000793 GO:0000794 GO:0000798 GO:0000819 GO:0003674 GO:0003682 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0006139 GO:0006259 GO:0006281 GO:0006302 GO:0006323 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007049 GO:0007059 GO:0007062 GO:0007127 GO:0007135 GO:0008150 GO:0008152 GO:0008278 GO:0008608 GO:0009987 GO:0010032 GO:0016043 GO:0022402 GO:0022414 GO:0030261 GO:0031974 GO:0031981 GO:0032991 GO:0033554 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0045132 GO:0045143 GO:0045144 GO:0046483 GO:0048285 GO:0050896 GO:0051177 GO:0051276 GO:0051316 GO:0051321 GO:0051455 GO:0051716 GO:0051754 GO:0061982 GO:0061983 GO:0070013 GO:0070192 GO:0070601 GO:0071103 GO:0071704 GO:0071840 GO:0090304 GO:0098813 GO:0140013 GO:1901360 GO:1903046

KEGG Pathways

Metabolic & Signaling

ko04110 ko04111 map04110 map04111

Pfam Domains

Protein Families

Rad21_Rec8 Rad21_Rec8_N

Protein Analysis

431

Amino Acids

48.0

Weight (kDa)

6.25

Isoelectric Point (pI)

50.68

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000542)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G05490 AT5G05490
fragaria_vesca	FvH4_5g27761 FvH4_5g31060 FvH4_5g35270
malus_domestica	MD12G1179600.v1.1
prunus_persica	Prupe.2G254800_v2.0.a1 Prupe.2G254800_v2.0.a1
pyrus_communis	pycom12g16940
rosa_chinensis	RchiOBHm_Chr0c11g0499361 RchiOBHm_Chr0c11g0499371 RchiOBHm_Chr0c11g0499561 RchiOBHm_Chr0c11g0499571 RchiOBHm_Chr0c11g0499581 RchiOBHm_Chr5g0049691 RchiOBHm_Chr5g0049701 RchiOBHm_Chr7g0230591 RchiOBHm_Chr7g0230601 RchiOBHm_Chr7g0231161 RchiOBHm_Chr7g0231171 RchiOBHm_Chr7g0231181 RchiOBHm_Chr7g0236141 RchiOBHm_Chr7g0236431 RchiOBHm_Chr7g0236461 RchiOBHm_Chr7g0236501
rosa_laevigata	RLG00000001078 RLG00000001102 RLG00000001195 RLG00000001205 RLG00000001937 RLG00000030015 RLG00000030017
rosa_multiflora	Rmu_co8170892.1_g000001 Rmu_co8276489.1_g000001 Rmu_sc0000112.1_g000006 Rmu_sc0000768.1_g000037 Rmu_sc0002222.1_g000015 Rmu_sc0002449.1_g000012 Rmu_sc0002449.1_g000029 Rmu_sc0002905.1_g000001 Rmu_sc0003720.1_g000008 Rmu_sc0005578.1_g000004 Rmu_sc0010974.1_g000001 Rmu_sc0010983.1_g000001
rosa_roxburghii	Rroxscaffold_3G00225060 Rroxscaffold_3G00225070 Rroxscaffold_3G00225350 Rroxscaffold_3G00226600 Rroxscaffold_3G00229860
rosa_rugosa	Rorug07G0294500 Rorug07G0294600 Rorug07G0295300 Rorug07G0297000
rosa_samantha	Rh1AG102400 Rh5BG337600 Rh5DG349800 Rh7AG413200 Rh7AG440900 Rh7AG448200 Rh7AG448700 Rh7AG449500 Rh7AG451400 Rh7AG452700 Rh7AG452800 Rh7AG453000 Rh7AG453100 Rh7CG431600 Rh7CG432100 Rh7CG453400 Rh7CG469500 Rh7CG471500 Rh7DG368200 Rh7DG409000 Rh7DG430700 Rh7DG438900 Rh7DG440800
rosa_wichuraiana	Rw1G008170 Rw7G034070 Rw7G036650 Rw7G036670 Rw7G036710 Rw7G037350 Rw7G037530 Rw7G037600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	432
AccB7I	CCANNNNNTGG	1 cut(s)	692
AccII	CGCG	1 cut(s)	120
AciI	CCGC	3 cut(s)	590, 1067, 1251
AclWI	GGATC	3 cut(s)	335, 819, 876
AcsI	RAATTY	2 cut(s)	212, 808
AcuI	CTGAAG	2 cut(s)	330, 846
AfaI	GTAC	2 cut(s)	438, 963
AfiI	CCNNNNNNNGG	4 cut(s)	692, 866, 992, 1257
AflII	CTTAAG	1 cut(s)	755
AflIII	ACRYGT	2 cut(s)	10, 501
AgsI	TTSAA	4 cut(s)	236, 296, 635, 932
AjiI	CACGTC	2 cut(s)	75, 488
AjnI	CCWGG	4 cut(s)	183, 310, 802, 1146
AluBI	AGCT	7 cut(s)	149, 229, 410, 749, 837, 1130, 1187
AluI	AGCT	7 cut(s)	149, 229, 410, 749, 837, 1130, 1187
Alw21I	GWGCWC	3 cut(s)	87, 839, 1132
Alw26I	GTCTC	4 cut(s)	50, 235, 592, 1112
AlwI	GGATC	3 cut(s)	335, 819, 876
Ama87I	CYCGRG	3 cut(s)	832, 1134, 1221
AoxI	GGCC	6 cut(s)	137, 186, 683, 896, 994, 1280
ApeKI	GCWGC	2 cut(s)	146, 1184
ApoI	RAATTY	2 cut(s)	212, 808
Asp700I	GAANNNNTTC	1 cut(s)	553
AspLEI	GCGC	1 cut(s)	381
AspS9I	GGNCC	8 cut(s)	137, 421, 572, 614, 995, 1031, 1248, 1280
AsuC2I	CCSGG	4 cut(s)	913, 998, 1222, 1223
AsuHPI	GGTGA	6 cut(s)	102, 173, 549, 573, 944, 975
AvaI	CYCGRG	3 cut(s)	832, 1134, 1221
AvaII	GGWCC	5 cut(s)	421, 572, 614, 1031, 1248
BanII	GRGCYC	2 cut(s)	839, 1132
BauI	CACGAG	1 cut(s)	357
BbsI	GAAGAC	2 cut(s)	528, 657
Bbv12I	GWGCWC	3 cut(s)	87, 839, 1132
BbvI	GCAGC	2 cut(s)	158, 1196
BccI	CCATC	5 cut(s)	20, 605, 613, 731, 836
BciT130I	CCWGG	4 cut(s)	185, 312, 804, 1148
BclI	TGATCA	2 cut(s)	166, 1006
BcnI	CCSGG	4 cut(s)	913, 998, 1222, 1223
BcoDI	GTCTC	4 cut(s)	50, 235, 592, 1112
BfaI	CTAG	1 cut(s)	252
BfmI	CTRYAG	2 cut(s)	144, 1161
BfrI	CTTAAG	1 cut(s)	755
BfuAI	ACCTGC	1 cut(s)	432
BglII	AGATCT	1 cut(s)	349
BisI	GCNGC	2 cut(s)	147, 1185
BlpI	GCTNAGC	2 cut(s)	769, 838
BlsI	GCNGC	2 cut(s)	148, 1186
BmcAI	AGTACT	1 cut(s)	438
Bme1390I	CCNGG	8 cut(s)	185, 312, 804, 913, 998, 1148, 1222, 1223
Bme18I	GGWCC	5 cut(s)	421, 572, 614, 1031, 1248
BmeT110I	CYCGRG	3 cut(s)	832, 1134, 1221
BmgBI	CACGTC	2 cut(s)	75, 488
BmgT120I	GGNCC	8 cut(s)	137, 421, 572, 614, 995, 1031, 1248, 1280
BmiI	GGNNCC	3 cut(s)	335, 658, 1172
BmrFI	CCNGG	8 cut(s)	185, 312, 804, 913, 998, 1148, 1222, 1223
BmrI	ACTGGG	1 cut(s)	655
BmsI	GCATC	4 cut(s)	287, 352, 851, 917
BmuI	ACTGGG	1 cut(s)	655
BoxI	GACNNNNGTC	1 cut(s)	577
BpiI	GAAGAC	2 cut(s)	528, 657
Bpu10I	CCTNAGC	1 cut(s)	987
Bpu1102I	GCTNAGC	2 cut(s)	769, 838
BpuMI	CCSGG	4 cut(s)	913, 998, 1222, 1223
BsaBI	GATNNNNATC	3 cut(s)	126, 171, 786
BsaJI	CCNNGG	5 cut(s)	568, 912, 1133, 1146, 1221
BsaWI	WCCGGW	1 cut(s)	1173
BsaXI	ACNNNNNCTCC	2 cut(s)	477, 507
Bsc4I	CCNNNNNNNGG	4 cut(s)	692, 866, 992, 1257
Bse1I	ACTGG	2 cut(s)	466, 661
Bse8I	GATNNNNATC	3 cut(s)	126, 171, 786
BseBI	CCWGG	4 cut(s)	185, 312, 804, 1148
BseDI	CCNNGG	5 cut(s)	568, 912, 1133, 1146, 1221
BseGI	GGATG	8 cut(s)	31, 55, 172, 513, 742, 828, 908, 1231
BseJI	GATNNNNATC	3 cut(s)	126, 171, 786
BseLI	CCNNNNNNNGG	4 cut(s)	692, 866, 992, 1257
BseMII	CTCAG	3 cut(s)	585, 852, 978
BseNI	ACTGG	2 cut(s)	466, 661
BseRI	GAGGAG	2 cut(s)	105, 1122
BseXI	GCAGC	2 cut(s)	158, 1196
BseYI	CCCAGC	1 cut(s)	718
Bsh1236I	CGCG	1 cut(s)	120
BshFI	GGCC	6 cut(s)	139, 188, 685, 898, 996, 1282
BsiHKAI	GWGCWC	3 cut(s)	87, 839, 1132
BsiHKCI	CYCGRG	3 cut(s)	832, 1134, 1221
BsiSI	CCGG	5 cut(s)	885, 912, 998, 1174, 1222
BslFI	GGGAC	2 cut(s)	262, 503
BslI	CCNNNNNNNGG	4 cut(s)	692, 866, 992, 1257
BsmAI	GTCTC	4 cut(s)	50, 235, 592, 1112
BsmBI	CGTCTC	1 cut(s)	1112
BsmFI	GGGAC	2 cut(s)	262, 503
BsnI	GGCC	6 cut(s)	139, 188, 685, 898, 996, 1282
BsoBI	CYCGRG	3 cut(s)	832, 1134, 1221
Bsp1286I	GDGCHC	3 cut(s)	87, 839, 1132
Bsp1407I	TGTACA	1 cut(s)	961
Bsp143I	GATC	9 cut(s)	39, 166, 178, 340, 349, 824, 881, 1006, 1053
Bsp1720I	GCTNAGC	2 cut(s)	769, 838
Bsp68I	TCGCGA	1 cut(s)	120
BspACI	CCGC	3 cut(s)	590, 1067, 1251
BspANI	GGCC	6 cut(s)	139, 188, 685, 898, 996, 1282
BspCNI	CTCAG	3 cut(s)	586, 851, 979
BspFNI	CGCG	1 cut(s)	120
BspLI	GGNNCC	3 cut(s)	335, 658, 1172
BspMAI	CTGCAG	2 cut(s)	148, 1165
BspMI	ACCTGC	1 cut(s)	432
BspPI	GGATC	3 cut(s)	335, 819, 876
BspTI	CTTAAG	1 cut(s)	755
BsrGI	TGTACA	1 cut(s)	961
BsrI	ACTGG	2 cut(s)	466, 661
BssECI	CCNNGG	5 cut(s)	568, 912, 1133, 1146, 1221
BssMI	GATC	9 cut(s)	39, 166, 178, 340, 349, 824, 881, 1006, 1053
BssSI	CACGAG	1 cut(s)	357
BssT1I	CCWWGG	1 cut(s)	568
Bst2BI	CACGAG	1 cut(s)	357
Bst2UI	CCWGG	4 cut(s)	185, 312, 804, 1148
Bst4CI	ACNGT	1 cut(s)	63
Bst6I	CTCTTC	2 cut(s)	48, 559
BstAFI	CTTAAG	1 cut(s)	755
BstAUI	TGTACA	1 cut(s)	961
BstC8I	GCNNGC	2 cut(s)	276, 852
BstDEI	CTNAG	4 cut(s)	594, 769, 838, 987
BstEII	GGTNACC	1 cut(s)	981
BstENI	CCTNNNNNAGG	2 cut(s)	864, 990
BstF5I	GGATG	8 cut(s)	31, 55, 172, 513, 742, 828, 908, 1231
BstFNI	CGCG	1 cut(s)	120
BstHHI	GCGC	1 cut(s)	381
BstKTI	GATC	9 cut(s)	42, 169, 181, 343, 352, 827, 884, 1009, 1056
BstMAI	GTCTC	4 cut(s)	50, 235, 592, 1112
BstMBI	GATC	9 cut(s)	39, 166, 178, 340, 349, 824, 881, 1006, 1053
BstNI	CCWGG	4 cut(s)	185, 312, 804, 1148
BstNSI	RCATGY	2 cut(s)	14, 505
BstPAI	GACNNNNGTC	1 cut(s)	577
BstPI	GGTNACC	1 cut(s)	981
BstSCI	CCNGG	8 cut(s)	183, 310, 802, 911, 996, 1146, 1220, 1221
BstSFI	CTRYAG	2 cut(s)	144, 1161
BstUI	CGCG	1 cut(s)	120
BstV1I	GCAGC	2 cut(s)	158, 1196
BstV2I	GAAGAC	2 cut(s)	528, 657
BstX2I	RGATCY	3 cut(s)	340, 349, 824
BstYI	RGATCY	3 cut(s)	340, 349, 824
BsuRI	GGCC	6 cut(s)	139, 188, 685, 898, 996, 1282
BtgZI	GCGATG	1 cut(s)	135
BtrI	CACGTC	2 cut(s)	75, 488
BtsCI	GGATG	8 cut(s)	31, 55, 172, 513, 742, 828, 908, 1231
BtuMI	TCGCGA	1 cut(s)	120
BveI	ACCTGC	1 cut(s)	432
Cac8I	GCNNGC	2 cut(s)	276, 852
CfoI	GCGC	1 cut(s)	381
Cfr13I	GGNCC	8 cut(s)	137, 421, 572, 614, 995, 1031, 1248, 1280
Cfr9I	CCCGGG	1 cut(s)	1221
Csp6I	GTAC	2 cut(s)	437, 962
CviAII	CATG	7 cut(s)	11, 317, 418, 502, 530, 733, 1057
CviQI	GTAC	2 cut(s)	437, 962
DdeI	CTNAG	4 cut(s)	594, 769, 838, 987
DpnI	GATC	9 cut(s)	41, 168, 180, 342, 351, 826, 883, 1008, 1055
DpnII	GATC	9 cut(s)	39, 166, 178, 340, 349, 824, 881, 1006, 1053
Eam1104I	CTCTTC	2 cut(s)	48, 559
EarI	CTCTTC	2 cut(s)	48, 559
Ecl136II	GAGCTC	2 cut(s)	837, 1130
Eco130I	CCWWGG	1 cut(s)	568
Eco147I	AGGCCT	1 cut(s)	898
Eco24I	GRGCYC	2 cut(s)	839, 1132
Eco32I	GATATC	1 cut(s)	626
Eco47I	GGWCC	5 cut(s)	421, 572, 614, 1031, 1248
Eco53kI	GAGCTC	2 cut(s)	837, 1130
Eco57I	CTGAAG	2 cut(s)	330, 846
Eco88I	CYCGRG	3 cut(s)	832, 1134, 1221
Eco91I	GGTNACC	1 cut(s)	981
EcoICRI	GAGCTC	2 cut(s)	837, 1130
EcoNI	CCTNNNNNAGG	2 cut(s)	864, 990
EcoO109I	RGGNCCY	1 cut(s)	137
EcoO65I	GGTNACC	1 cut(s)	981
EcoRII	CCWGG	4 cut(s)	183, 310, 802, 1146
EcoRV	GATATC	1 cut(s)	626
EcoT14I	CCWWGG	1 cut(s)	568
EcoT38I	GRGCYC	2 cut(s)	839, 1132
ErhI	CCWWGG	1 cut(s)	568
Esp3I	CGTCTC	1 cut(s)	1112
FaeI	CATG	7 cut(s)	14, 320, 421, 505, 533, 736, 1060
FaqI	GGGAC	2 cut(s)	262, 503
FatI	CATG	7 cut(s)	10, 316, 417, 501, 529, 732, 1056
FauNDI	CATATG	1 cut(s)	199
FbaI	TGATCA	2 cut(s)	166, 1006
Fnu4HI	GCNGC	2 cut(s)	147, 1185
FokI	GGATG	8 cut(s)	38, 62, 159, 520, 749, 815, 895, 1238
FriOI	GRGCYC	2 cut(s)	839, 1132
Fsp4HI	GCNGC	2 cut(s)	147, 1185
FspBI	CTAG	1 cut(s)	252
GlaI	GCGC	1 cut(s)	380
GluI	GCNGC	2 cut(s)	147, 1185
GsaI	CCCAGC	1 cut(s)	722
HaeIII	GGCC	6 cut(s)	139, 188, 685, 898, 996, 1282
HapII	CCGG	5 cut(s)	885, 912, 998, 1174, 1222
HhaI	GCGC	1 cut(s)	381
Hin1II	CATG	7 cut(s)	14, 320, 421, 505, 533, 736, 1060
Hin6I	GCGC	1 cut(s)	379
HinP1I	GCGC	1 cut(s)	379
HinfI	GANTC	5 cut(s)	533, 949, 1142, 1236, 1264
HpaII	CCGG	5 cut(s)	885, 912, 998, 1174, 1222
HphI	GGTGA	6 cut(s)	102, 173, 549, 573, 944, 975
Hpy188I	TCNGA	6 cut(s)	349, 618, 814, 865, 1094, 1104
HpyAV	CCTTC	8 cut(s)	38, 117, 128, 354, 860, 870, 1089, 1161
HpyCH4III	ACNGT	1 cut(s)	63
HpyCH4IV	ACGT	4 cut(s)	74, 474, 487, 819
HpyCH4V	TGCA	3 cut(s)	146, 365, 1163
HpyF3I	CTNAG	4 cut(s)	594, 769, 838, 987
HpySE526I	ACGT	4 cut(s)	74, 474, 487, 819
Hsp92II	CATG	7 cut(s)	14, 320, 421, 505, 533, 736, 1060
HspAI	GCGC	1 cut(s)	379
Ksp22I	TGATCA	2 cut(s)	166, 1006
Kzo9I	GATC	9 cut(s)	39, 166, 178, 340, 349, 824, 881, 1006, 1053
LmnI	GCTCC	4 cut(s)	339, 662, 1127, 1135
Lsp1109I	GCAGC	2 cut(s)	158, 1196
LweI	GCATC	4 cut(s)	287, 352, 851, 917
MaeI	CTAG	1 cut(s)	252
MaeII	ACGT	4 cut(s)	74, 474, 487, 819
MaeIII	GTNAC	5 cut(s)	579, 697, 796, 950, 981
MalI	GATC	9 cut(s)	41, 168, 180, 342, 351, 826, 883, 1008, 1055
MboI	GATC	9 cut(s)	39, 166, 178, 340, 349, 824, 881, 1006, 1053
MboII	GAAGA	7 cut(s)	42, 65, 415, 458, 528, 546, 657
MflI	RGATCY	3 cut(s)	340, 349, 824
MhlI	GDGCHC	3 cut(s)	87, 839, 1132
MluCI	AATT	4 cut(s)	212, 808, 855, 871
MlyI	GAGTC	3 cut(s)	542, 958, 1245
MroXI	GAANNNNTTC	1 cut(s)	553
MseI	TTAA	2 cut(s)	66, 756
MslI	CAYNNNNRTG	2 cut(s)	506, 957
MspA1I	CMGCKG	1 cut(s)	149
MspCI	CTTAAG	1 cut(s)	755
MspI	CCGG	5 cut(s)	885, 912, 998, 1174, 1222
MspR9I	CCNGG	8 cut(s)	185, 312, 804, 913, 998, 1148, 1222, 1223
MvaI	CCWGG	4 cut(s)	185, 312, 804, 1148
MvnI	CGCG	1 cut(s)	120
NciI	CCSGG	4 cut(s)	913, 998, 1222, 1223
NdeI	CATATG	1 cut(s)	199
NdeII	GATC	9 cut(s)	39, 166, 178, 340, 349, 824, 881, 1006, 1053
NlaIII	CATG	7 cut(s)	14, 320, 421, 505, 533, 736, 1060
NlaIV	GGNNCC	3 cut(s)	335, 658, 1172
NmuCI	GTSAC	5 cut(s)	579, 697, 796, 950, 981
NruI	TCGCGA	1 cut(s)	120
NspI	RCATGY	2 cut(s)	14, 505
PceI	AGGCCT	1 cut(s)	898
PciI	ACATGT	2 cut(s)	10, 501
PcsI	WCGNNNNNNNCGW	1 cut(s)	1280
PdmI	GAANNNNTTC	1 cut(s)	553
PfeI	GAWTC	2 cut(s)	1142, 1264
PflMI	CCANNNNNTGG	1 cut(s)	692
PkrI	GCNGC	2 cut(s)	148, 1186
PleI	GAGTC	3 cut(s)	541, 957, 1244
PpsI	GAGTC	3 cut(s)	541, 957, 1244
PscI	ACATGT	2 cut(s)	10, 501
PshAI	GACNNNNGTC	1 cut(s)	577
Psp124BI	GAGCTC	2 cut(s)	839, 1132
Psp6I	CCWGG	4 cut(s)	183, 310, 802, 1146
PspEI	GGTNACC	1 cut(s)	981
PspFI	CCCAGC	1 cut(s)	718
PspGI	CCWGG	4 cut(s)	183, 310, 802, 1146
PspN4I	GGNNCC	3 cut(s)	335, 658, 1172
PspPI	GGNCC	8 cut(s)	137, 421, 572, 614, 995, 1031, 1248, 1280
PstI	CTGCAG	2 cut(s)	148, 1165
PsuI	RGATCY	3 cut(s)	340, 349, 824
PvuII	CAGCTG	1 cut(s)	149
RruI	TCGCGA	1 cut(s)	120
RsaI	GTAC	2 cut(s)	438, 963
RsaNI	GTAC	2 cut(s)	437, 962
RseI	CAYNNNNRTG	2 cut(s)	506, 957
SacI	GAGCTC	2 cut(s)	839, 1132
SaqAI	TTAA	2 cut(s)	66, 756
SatI	GCNGC	2 cut(s)	147, 1185
Sau3AI	GATC	9 cut(s)	39, 166, 178, 340, 349, 824, 881, 1006, 1053
Sau96I	GGNCC	8 cut(s)	137, 421, 572, 614, 995, 1031, 1248, 1280
ScaI	AGTACT	1 cut(s)	438
SchI	GAGTC	3 cut(s)	542, 958, 1245
ScrFI	CCNGG	8 cut(s)	185, 312, 804, 913, 998, 1148, 1222, 1223
SduI	GDGCHC	3 cut(s)	87, 839, 1132
SfaNI	GCATC	4 cut(s)	287, 352, 851, 917
SfcI	CTRYAG	2 cut(s)	144, 1161
SinI	GGWCC	5 cut(s)	421, 572, 614, 1031, 1248
SmaI	CCCGGG	1 cut(s)	1223
SmiMI	CAYNNNNRTG	2 cut(s)	506, 957
SmlI	CTYRAG	1 cut(s)	755
SmoI	CTYRAG	1 cut(s)	755
Sse9I	AATT	4 cut(s)	212, 808, 855, 871
SseBI	AGGCCT	1 cut(s)	898
SsiI	CCGC	3 cut(s)	590, 1067, 1251
SspMI	CTAG	1 cut(s)	252
SstI	GAGCTC	2 cut(s)	839, 1132
StuI	AGGCCT	1 cut(s)	898
StyD4I	CCNGG	8 cut(s)	183, 310, 802, 911, 996, 1146, 1220, 1221
StyI	CCWWGG	1 cut(s)	568
TaaI	ACNGT	1 cut(s)	63
TaiI	ACGT	4 cut(s)	77, 477, 490, 822
TaqI	TCGA	6 cut(s)	42, 969, 977, 1140, 1239, 1274
TasI	AATT	4 cut(s)	212, 808, 855, 871
TatI	WGTACW	2 cut(s)	436, 961
TfiI	GAWTC	2 cut(s)	1142, 1264
Tru1I	TTAA	2 cut(s)	66, 756
Tru9I	TTAA	2 cut(s)	66, 756
TseFI	GTSAC	5 cut(s)	579, 697, 796, 950, 981
TseI	GCWGC	2 cut(s)	146, 1184
Tsp45I	GTSAC	5 cut(s)	579, 697, 796, 950, 981
TspDTI	ATGAA	8 cut(s)	66, 138, 216, 239, 416, 524, 632, 721
TspGWI	ACGGA	1 cut(s)	1136
TspMI	CCCGGG	1 cut(s)	1221
Van91I	CCANNNNNTGG	1 cut(s)	692
Vha464I	CTTAAG	1 cut(s)	755
VpaK11BI	GGWCC	5 cut(s)	421, 572, 614, 1031, 1248
XagI	CCTNNNNNAGG	2 cut(s)	864, 990
XapI	RAATTY	2 cut(s)	212, 808
XceI	RCATGY	2 cut(s)	14, 505
XmaI	CCCGGG	1 cut(s)	1221
XmnI	GAANNNNTTC	1 cut(s)	553
XspI	CTAG	1 cut(s)	252
ZrmI	AGTACT	1 cut(s)	438

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.