Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr6

Orthogroup ID

OG0000542

Physical Location & Seq

Genomic Coordinates Forward (+)

53371191 .. 53375512

Gene Structure 4322 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000030015

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1791 bp

ATGTTCTACTCACACAGCCTCCTTGCTCGCAAAGAGCCGCTCGGCCAAATCTGCGAAGAGATTCTGAATCCAGGAGCTCCTATGGCTCTCCGACTCTCCAGTATTCTCATGGGTGGAGTCGTCATCGTCTACGAACGTAAAGTGAAGCTTCTATTCGATGATGTGCACCGTCTTTTGGATCAATTAAACGAAGCATGGAAGAAGGTGAAATCCAACACAGACTCCACTATCCTACCCAAACGGAGAGCTCAGGCCAAGAAAGAAGCAATAACTCTGCCAGAGGCTGAGCATGAAGATACGGATCTTGTTGTTGGTGGTGGTGGAGACATTGACATCGAGCAGTCTCTTGATTTTTCTCACCATGCCACGCTTTTCCAGCAGCAAACCGGCTATTTTCTCATGAAACTGGATAGTGTAGATGTGGGAGAACCACTTAACAATAATGCAGTAGAGGGAGATCTACATCAGAACTTACATCAAGCTGATCCTGAGGATATCACATTGCCTAATTGTTATGATCCATCAGATGCACATCCAGATTTGTTCAACCGTTGCTTTGAGAGATTTGAAATTGAGGGAGATGACGTAGACCTCACATCAGGAGAGCCCACACATATTCGACCACCTTCTCCAAATTATCTAATACCTTCTCCACCTCGTCAAGACCAGCATCAGGAAGGACAGCAGGCTAATAATGTGTTTGATGAAGTGCTGCAGATGCAAGATGTTCAAGAGAATGCTCAACAGAGGCAGAGGCCTACAAGGAGGAGAAAGAGAAAAACACCAGCCTCTGTAATGGATAATGACCAAACAATCCATCCTGCTCATGTGTACCAATCTTGGCTTCAAGATACTTCAGATATAGTTTCAAGAAGACGAAGAAACCAAAAGCCCAAGAACATAATGTCTACTATGAAGATTGGTAAACTCATGGAGCAGCCAGCTAGTGTTCTTATGGGTCGTTTATTTAAACCTGGAACTGGAGAAACATATTATCCAGCTCCTCTCTTACAGCTATTCAAGGAAATACATACCCATGACTCACCTTCTGCATTCACCTCGCCACCTCTGCCTCCAGAACCATCATCATGGTCACCACCTGGAAGACAAACTTATCAAGGCCTGCCTGTTGAAGATTTTCTTAGTGGAGGTGGCTCCCAATCATTTGCAACTCCCACGGAACAGATACGGACAAATTTAGTTAACAATGACCGACAACATGAAGTGCTGGATGATCTGCGAGCCAATCTTATTGGCAAGAGAGGAGCTGATGCCAACCTGGCGACACCAAGGAATTCTGGAGATGAAAGAAGATCCGTCCTGAGCTCCTCATCTGGGAAGGGAGTTGACAAAAACAGTTCAGAAGTCAATTCAGGACGGAAAAGGCGTTATTCATCTAAACATAGCAACGACGGACTTGAACCAGTGTCGGAGGATAATGGATATCATCACTCTGATCCAAACTTCAAGGTATCAAGGTTATCTGGAAATGGCCCAACACCCGAGCAAGAACTATTGATGGAAACTGGACCGACACAGACACAACAACCCATCATCAATCAGCCACTGGAAAAAGTGACTGATGCAATTCGAATGGAACTGAAATCCCATTTTGAAATACCGGGTGGCCCTCAAGTAGAATCCCTGAGCAACCTGACTGCTGGAATGAATCGAAGAGGAGCGGCTTTGCTTTTCTGTCAAACTTGTGTTCTCGCTACTCGTGATTTCGTAAAAGTTAAACAAAATGCCCCTTACGAGGATATTCTCATTACTAGAGGACCAAATATGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000228 GO:0000280 GO:0000793 GO:0000794 GO:0000798 GO:0000819 GO:0003674 GO:0003682 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0006139 GO:0006259 GO:0006281 GO:0006302 GO:0006323 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007049 GO:0007059 GO:0007062 GO:0007127 GO:0007135 GO:0008150 GO:0008152 GO:0008278 GO:0008608 GO:0009987 GO:0010032 GO:0016043 GO:0022402 GO:0022414 GO:0030261 GO:0031974 GO:0031981 GO:0032991 GO:0033554 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0045132 GO:0045143 GO:0045144 GO:0046483 GO:0048285 GO:0050896 GO:0051177 GO:0051276 GO:0051316 GO:0051321 GO:0051455 GO:0051716 GO:0051754 GO:0061982 GO:0061983 GO:0070013 GO:0070192 GO:0070601 GO:0071103 GO:0071704 GO:0071840 GO:0090304 GO:0098813 GO:0140013 GO:1901360 GO:1903046

KEGG Pathways

Metabolic & Signaling

ko04110 ko04111 map04110 map04111

Pfam Domains

Protein Families

Rad21_Rec8 Rad21_Rec8_N

Protein Analysis

597

Amino Acids

66.66

Weight (kDa)

5.79

Isoelectric Point (pI)

54.72

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Rad21_Rec8_N	PF04825	16 - 80	1.8e-15	N terminus of Rad21 / Rec8 like protein
Rad21_Rec8	PF04824	544 - 596	3.3e-18	Conserved region of Rad21 / Rec8 like protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0000542)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G05490 AT5G05490
fragaria_vesca	FvH4_5g27761 FvH4_5g31060 FvH4_5g35270
malus_domestica	MD12G1179600.v1.1
prunus_persica	Prupe.2G254800_v2.0.a1 Prupe.2G254800_v2.0.a1
pyrus_communis	pycom12g16940
rosa_chinensis	RchiOBHm_Chr0c11g0499361 RchiOBHm_Chr0c11g0499371 RchiOBHm_Chr0c11g0499561 RchiOBHm_Chr0c11g0499571 RchiOBHm_Chr0c11g0499581 RchiOBHm_Chr5g0049691 RchiOBHm_Chr5g0049701 RchiOBHm_Chr7g0230591 RchiOBHm_Chr7g0230601 RchiOBHm_Chr7g0231161 RchiOBHm_Chr7g0231171 RchiOBHm_Chr7g0231181 RchiOBHm_Chr7g0236141 RchiOBHm_Chr7g0236431 RchiOBHm_Chr7g0236461 RchiOBHm_Chr7g0236501
rosa_laevigata	RLG00000001078 RLG00000001102 RLG00000001195 RLG00000001205 RLG00000001937 RLG00000030015 RLG00000030017
rosa_multiflora	Rmu_co8170892.1_g000001 Rmu_co8276489.1_g000001 Rmu_sc0000112.1_g000006 Rmu_sc0000768.1_g000037 Rmu_sc0002222.1_g000015 Rmu_sc0002449.1_g000012 Rmu_sc0002449.1_g000029 Rmu_sc0002905.1_g000001 Rmu_sc0003720.1_g000008 Rmu_sc0005578.1_g000004 Rmu_sc0010974.1_g000001 Rmu_sc0010983.1_g000001
rosa_roxburghii	Rroxscaffold_3G00225060 Rroxscaffold_3G00225070 Rroxscaffold_3G00225350 Rroxscaffold_3G00226600 Rroxscaffold_3G00229860
rosa_rugosa	Rorug07G0294500 Rorug07G0294600 Rorug07G0295300 Rorug07G0297000
rosa_samantha	Rh1AG102400 Rh5BG337600 Rh5DG349800 Rh7AG413200 Rh7AG440900 Rh7AG448200 Rh7AG448700 Rh7AG449500 Rh7AG451400 Rh7AG452700 Rh7AG452800 Rh7AG453000 Rh7AG453100 Rh7CG431600 Rh7CG432100 Rh7CG453400 Rh7CG469500 Rh7CG471500 Rh7DG368200 Rh7DG409000 Rh7DG430700 Rh7DG438900 Rh7DG440800
rosa_wichuraiana	Rw1G008170 Rw7G034070 Rw7G036650 Rw7G036670 Rw7G036710 Rw7G037350 Rw7G037530 Rw7G037600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	2 cut(s)	40, 1682
AccI	GTMKAC	3 cut(s)	129, 588, 908
AciI	CCGC	2 cut(s)	38, 1682
AclWI	GGATC	6 cut(s)	186, 309, 479, 512, 1308, 1451
AcoI	YGGCCR	1 cut(s)	43
AcsI	RAATTY	2 cut(s)	1195, 1294
AcuI	CTGAAG	1 cut(s)	840
AfaI	GTAC	1 cut(s)	833
AfiI	CCNNNNNNNGG	5 cut(s)	175, 673, 980, 1335, 1756
AjnI	CCWGG	4 cut(s)	70, 973, 1099, 1278
AjuI	GAANNNNNNNTTGG	2 cut(s)	828, 860
AluBI	AGCT	9 cut(s)	77, 148, 248, 482, 944, 1001, 1015, 1268, 1326
AluI	AGCT	9 cut(s)	77, 148, 248, 482, 944, 1001, 1015, 1268, 1326
Alw21I	GWGCWC	4 cut(s)	79, 168, 250, 1328
Alw26I	GTCTC	2 cut(s)	318, 348
Alw44I	GTGCAC	1 cut(s)	164
AlwI	GGATC	6 cut(s)	186, 309, 479, 512, 1308, 1451
AlwNI	CAGNNNCTG	3 cut(s)	284, 791, 1567
Ama87I	CYCGRG	1 cut(s)	1502
AoxI	GGCC	6 cut(s)	43, 252, 755, 1120, 1492, 1627
ApaLI	GTGCAC	1 cut(s)	164
ApeKI	GCWGC	3 cut(s)	379, 712, 937
ApoI	RAATTY	2 cut(s)	1195, 1294
Asp700I	GAANNNNTTC	2 cut(s)	60, 1137
AspS9I	GGNCC	4 cut(s)	1493, 1529, 1628, 1778
AsuC2I	CCSGG	1 cut(s)	1623
AsuHPI	GGTGA	5 cut(s)	217, 350, 1035, 1048, 1086
AsuII	TTCGAA	1 cut(s)	1591
AvaI	CYCGRG	1 cut(s)	1502
AvaII	GGWCC	2 cut(s)	1529, 1778
AxyI	CCTNAGG	1 cut(s)	489
BaeGI	GKGCMC	1 cut(s)	168
BanII	GRGCYC	4 cut(s)	79, 250, 609, 1328
BauI	CACGAG	1 cut(s)	1719
BbsI	GAAGAC	2 cut(s)	880, 1111
Bbv12I	GWGCWC	4 cut(s)	79, 168, 250, 1328
BbvI	GCAGC	3 cut(s)	391, 699, 949
BccI	CCATC	5 cut(s)	529, 825, 1090, 1513, 1559
BcgI	CGANNNNNNTGC	2 cut(s)	1041, 1075
BciT130I	CCWGG	4 cut(s)	72, 975, 1101, 1280
BcnI	CCSGG	1 cut(s)	1623
BcoDI	GTCTC	2 cut(s)	318, 348
BfaI	CTAG	2 cut(s)	945, 1773
BfmI	CTRYAG	1 cut(s)	713
BglI	GCCNNNNNGGC	1 cut(s)	1280
BglII	AGATCT	1 cut(s)	457
BisI	GCNGC	5 cut(s)	38, 380, 713, 938, 1683
BlpI	GCTNAGC	1 cut(s)	285
BlsI	GCNGC	5 cut(s)	39, 381, 714, 939, 1684
Bme1390I	CCNGG	5 cut(s)	72, 975, 1101, 1280, 1623
Bme18I	GGWCC	2 cut(s)	1529, 1778
BmeT110I	CYCGRG	1 cut(s)	1502
BmgT120I	GGNCC	4 cut(s)	1493, 1529, 1628, 1778
BmiI	GGNNCC	1 cut(s)	1156
BmrFI	CCNGG	5 cut(s)	72, 975, 1101, 1280, 1623
BmsI	GCATC	5 cut(s)	517, 679, 708, 1261, 1573
BpiI	GAAGAC	2 cut(s)	880, 1111
BpmI	CTGGAG	4 cut(s)	82, 1002, 1059, 1320
Bpu10I	CCTNAGC	3 cut(s)	249, 1322, 1646
Bpu1102I	GCTNAGC	1 cut(s)	285
Bpu14I	TTCGAA	1 cut(s)	1591
BpuEI	CTTGAG	1 cut(s)	1617
BpuMI	CCSGG	1 cut(s)	1623
BsaBI	GATNNNNATC	3 cut(s)	300, 462, 531
BsaJI	CCNNGG	2 cut(s)	1176, 1289
BsaXI	ACNNNNNCTCC	5 cut(s)	33, 206, 236, 570, 600
Bsc4I	CCNNNNNNNGG	5 cut(s)	175, 673, 980, 1335, 1756
Bse118I	RCCGGY	1 cut(s)	386
Bse1I	ACTGG	6 cut(s)	99, 411, 985, 1424, 1531, 1572
Bse21I	CCTNAGG	1 cut(s)	489
Bse3DI	GCAATG	1 cut(s)	500
Bse8I	GATNNNNATC	3 cut(s)	300, 462, 531
BseBI	CCWGG	4 cut(s)	72, 975, 1101, 1280
BseDI	CCNNGG	2 cut(s)	1176, 1289
BseGI	GGATG	3 cut(s)	532, 817, 1237
BseJI	GATNNNNATC	3 cut(s)	300, 462, 531
BseLI	CCNNNNNNNGG	5 cut(s)	175, 673, 980, 1335, 1756
BseMI	GCAATG	1 cut(s)	500
BseMII	CTCAG	5 cut(s)	263, 276, 480, 1313, 1637
BseNI	ACTGG	6 cut(s)	99, 411, 985, 1424, 1531, 1572
BseRI	GAGGAG	5 cut(s)	781, 993, 1278, 1318, 1692
BseSI	GKGCMC	1 cut(s)	168
BseXI	GCAGC	3 cut(s)	391, 699, 949
BshFI	GGCC	6 cut(s)	45, 254, 757, 1122, 1494, 1629
BsiHKAI	GWGCWC	4 cut(s)	79, 168, 250, 1328
BsiHKCI	CYCGRG	1 cut(s)	1502
BsiSI	CCGG	2 cut(s)	387, 1622
BslI	CCNNNNNNNGG	5 cut(s)	175, 673, 980, 1335, 1756
BsmAI	GTCTC	2 cut(s)	318, 348
BsmI	GAATGC	2 cut(s)	742, 1052
BsnI	GGCC	6 cut(s)	45, 254, 757, 1122, 1494, 1629
BsoBI	CYCGRG	1 cut(s)	1502
Bsp119I	TTCGAA	1 cut(s)	1591
Bsp1286I	GDGCHC	5 cut(s)	79, 168, 250, 609, 1328
Bsp143I	GATC	8 cut(s)	178, 301, 457, 484, 517, 1234, 1313, 1456
Bsp1720I	GCTNAGC	1 cut(s)	285
BspACI	CCGC	2 cut(s)	38, 1682
BspANI	GGCC	6 cut(s)	45, 254, 757, 1122, 1494, 1629
BspCNI	CTCAG	5 cut(s)	262, 277, 481, 1314, 1638
BspHI	TCATGA	1 cut(s)	399
BspLI	GGNNCC	1 cut(s)	1156
BspMAI	CTGCAG	1 cut(s)	717
BspPI	GGATC	6 cut(s)	186, 309, 479, 512, 1308, 1451
BspT104I	TTCGAA	1 cut(s)	1591
BsrBI	CCGCTC	2 cut(s)	40, 1682
BsrDI	GCAATG	1 cut(s)	500
BsrFI	RCCGGY	1 cut(s)	386
BsrI	ACTGG	6 cut(s)	99, 411, 985, 1424, 1531, 1572
BssAI	RCCGGY	1 cut(s)	386
BssECI	CCNNGG	2 cut(s)	1176, 1289
BssMI	GATC	8 cut(s)	178, 301, 457, 484, 517, 1234, 1313, 1456
BssSI	CACGAG	1 cut(s)	1719
BssT1I	CCWWGG	1 cut(s)	1289
Bst2BI	CACGAG	1 cut(s)	1719
Bst2UI	CCWGG	4 cut(s)	72, 975, 1101, 1280
Bst4CI	ACNGT	3 cut(s)	170, 551, 1358
Bst6I	CTCTTC	2 cut(s)	51, 1669
BstBI	TTCGAA	1 cut(s)	1591
BstC8I	GCNNGC	5 cut(s)	28, 687, 942, 1124, 1242
BstDEI	CTNAG	6 cut(s)	249, 285, 489, 1142, 1322, 1646
BstDSI	CCRYGG	1 cut(s)	1176
BstEII	GGTNACC	1 cut(s)	1092
BstF5I	GGATG	3 cut(s)	532, 817, 1237
BstKTI	GATC	8 cut(s)	181, 304, 460, 487, 520, 1237, 1316, 1459
BstMAI	GTCTC	2 cut(s)	318, 348
BstMBI	GATC	8 cut(s)	178, 301, 457, 484, 517, 1234, 1313, 1456
BstMWI	GCNNNNNNNGC	6 cut(s)	51, 83, 376, 718, 1069, 1280
BstNI	CCWGG	4 cut(s)	72, 975, 1101, 1280
BstPI	GGTNACC	1 cut(s)	1092
BstSCI	CCNGG	5 cut(s)	70, 973, 1099, 1278, 1621
BstSFI	CTRYAG	1 cut(s)	713
BstSLI	GKGCMC	1 cut(s)	168
BstV1I	GCAGC	3 cut(s)	391, 699, 949
BstV2I	GAAGAC	2 cut(s)	880, 1111
BstX2I	RGATCY	3 cut(s)	301, 457, 1313
BstXI	CCANNNNNNTGG	1 cut(s)	1089
BstYI	RGATCY	3 cut(s)	301, 457, 1313
Bsu36I	CCTNAGG	1 cut(s)	489
BsuRI	GGCC	6 cut(s)	45, 254, 757, 1122, 1494, 1629
BtgI	CCRYGG	1 cut(s)	1176
BtsCI	GGATG	3 cut(s)	532, 817, 1237
BtsIMutI	CAGTG	2 cut(s)	1431, 1565
Cac8I	GCNNGC	5 cut(s)	28, 687, 942, 1124, 1242
CaiI	CAGNNNCTG	3 cut(s)	284, 791, 1567
CciI	TCATGA	1 cut(s)	399
Cfr10I	RCCGGY	1 cut(s)	386
Cfr13I	GGNCC	4 cut(s)	1493, 1529, 1628, 1778
Csp6I	GTAC	1 cut(s)	832
CviQI	GTAC	1 cut(s)	832
DdeI	CTNAG	6 cut(s)	249, 285, 489, 1142, 1322, 1646
DpnI	GATC	8 cut(s)	180, 303, 459, 486, 519, 1236, 1315, 1458
DpnII	GATC	8 cut(s)	178, 301, 457, 484, 517, 1234, 1313, 1456
DraI	TTTAAA	1 cut(s)	970
EaeI	YGGCCR	1 cut(s)	43
Eam1104I	CTCTTC	2 cut(s)	51, 1669
EarI	CTCTTC	2 cut(s)	51, 1669
Ecl136II	GAGCTC	3 cut(s)	77, 248, 1326
Eco130I	CCWWGG	1 cut(s)	1289
Eco147I	AGGCCT	2 cut(s)	757, 1122
Eco24I	GRGCYC	4 cut(s)	79, 250, 609, 1328
Eco32I	GATATC	2 cut(s)	496, 1445
Eco47I	GGWCC	2 cut(s)	1529, 1778
Eco53kI	GAGCTC	3 cut(s)	77, 248, 1326
Eco57I	CTGAAG	1 cut(s)	840
Eco81I	CCTNAGG	1 cut(s)	489
Eco88I	CYCGRG	1 cut(s)	1502
Eco91I	GGTNACC	1 cut(s)	1092
EcoICRI	GAGCTC	3 cut(s)	77, 248, 1326
EcoO65I	GGTNACC	1 cut(s)	1092
EcoRI	GAATTC	1 cut(s)	1294
EcoRII	CCWGG	4 cut(s)	70, 973, 1099, 1278
EcoRV	GATATC	2 cut(s)	496, 1445
EcoT14I	CCWWGG	1 cut(s)	1289
EcoT38I	GRGCYC	4 cut(s)	79, 250, 609, 1328
ErhI	CCWWGG	1 cut(s)	1289
FalI	AAGNNNNNCTT	6 cut(s)	132, 164, 1096, 1128, 1125, 1157
FblI	GTMKAC	3 cut(s)	129, 588, 908
Fnu4HI	GCNGC	5 cut(s)	38, 380, 713, 938, 1683
FokI	GGATG	3 cut(s)	519, 804, 1244
FriOI	GRGCYC	4 cut(s)	79, 250, 609, 1328
Fsp4HI	GCNGC	5 cut(s)	38, 380, 713, 938, 1683
FspBI	CTAG	2 cut(s)	945, 1773
GluI	GCNGC	5 cut(s)	38, 380, 713, 938, 1683
GsuI	CTGGAG	4 cut(s)	82, 1002, 1059, 1320
HaeIII	GGCC	6 cut(s)	45, 254, 757, 1122, 1494, 1629
HapII	CCGG	2 cut(s)	387, 1622
HincII	GTYRAC	2 cut(s)	1204, 1348
HindII	GTYRAC	2 cut(s)	1204, 1348
HindIII	AAGCTT	1 cut(s)	146
HinfI	GANTC	8 cut(s)	61, 67, 93, 117, 221, 1040, 1640, 1669
HpaI	GTTAAC	1 cut(s)	1204
HpaII	CCGG	2 cut(s)	387, 1622
HphI	GGTGA	5 cut(s)	217, 350, 1035, 1048, 1086
Hpy166II	GTNNAC	8 cut(s)	130, 166, 589, 832, 909, 926, 1204, 1348
Hpy188I	TCNGA	8 cut(s)	66, 92, 468, 526, 859, 1363, 1432, 1456
Hpy8I	GTNNAC	8 cut(s)	130, 166, 589, 832, 909, 926, 1204, 1348
Hpy99I	CGWCG	1 cut(s)	1415
HpyAV	CCTTC	6 cut(s)	196, 636, 657, 671, 1056, 1333
HpyCH4III	ACNGT	3 cut(s)	170, 551, 1358
HpyCH4IV	ACGT	2 cut(s)	136, 585
HpyCH4V	TGCA	8 cut(s)	166, 446, 530, 715, 721, 1052, 1169, 1586
HpyF10VI	GCNNNNNNNGC	6 cut(s)	51, 83, 376, 718, 1069, 1280
HpyF3I	CTNAG	6 cut(s)	249, 285, 489, 1142, 1322, 1646
HpySE526I	ACGT	2 cut(s)	136, 585
KspAI	GTTAAC	1 cut(s)	1204
Kzo9I	GATC	8 cut(s)	178, 301, 457, 484, 517, 1234, 1313, 1456
LmnI	GCTCC	8 cut(s)	74, 82, 934, 1006, 1160, 1265, 1331, 1679
Lsp1109I	GCAGC	3 cut(s)	391, 699, 949
LweI	GCATC	5 cut(s)	517, 679, 708, 1261, 1573
MaeI	CTAG	2 cut(s)	945, 1773
MaeII	ACGT	2 cut(s)	136, 585
MaeIII	GTNAC	2 cut(s)	1092, 1576
MalI	GATC	8 cut(s)	180, 303, 459, 486, 519, 1236, 1315, 1458
MbiI	CCGCTC	2 cut(s)	40, 1682
MboI	GATC	8 cut(s)	178, 301, 457, 484, 517, 1234, 1313, 1456
MflI	RGATCY	3 cut(s)	301, 457, 1313
MhlI	GDGCHC	5 cut(s)	79, 168, 250, 609, 1328
MluCI	AATT	8 cut(s)	182, 508, 570, 634, 1195, 1294, 1369, 1587
MlyI	GAGTC	4 cut(s)	87, 126, 215, 1034
MmeI	TCCRAC	3 cut(s)	115, 237, 1410
MroXI	GAANNNNTTC	2 cut(s)	60, 1137
MseI	TTAA	5 cut(s)	185, 435, 969, 1203, 1737
MslI	CAYNNNNRTG	2 cut(s)	1035, 1087
MspI	CCGG	2 cut(s)	387, 1622
MspR9I	CCNGG	5 cut(s)	72, 975, 1101, 1280, 1623
Mva1269I	GAATGC	2 cut(s)	742, 1052
MvaI	CCWGG	4 cut(s)	72, 975, 1101, 1280
MwoI	GCNNNNNNNGC	6 cut(s)	51, 83, 376, 718, 1069, 1280
NciI	CCSGG	1 cut(s)	1623
NdeII	GATC	8 cut(s)	178, 301, 457, 484, 517, 1234, 1313, 1456
NlaIV	GGNNCC	1 cut(s)	1156
NmeAIII	GCCGAG	1 cut(s)	21
NmuCI	GTSAC	2 cut(s)	1092, 1576
NspV	TTCGAA	1 cut(s)	1591
PagI	TCATGA	1 cut(s)	399
PceI	AGGCCT	2 cut(s)	757, 1122
PcsI	WCGNNNNNNNCGW	1 cut(s)	1384
PctI	GAATGC	2 cut(s)	742, 1052
PdmI	GAANNNNTTC	2 cut(s)	60, 1137
PfeI	GAWTC	4 cut(s)	61, 67, 1640, 1669
PfoI	TCCNGGA	1 cut(s)	70
PkrI	GCNGC	5 cut(s)	39, 381, 714, 939, 1684
PleI	GAGTC	4 cut(s)	87, 125, 215, 1034
PpsI	GAGTC	4 cut(s)	87, 125, 215, 1034
Psp124BI	GAGCTC	3 cut(s)	79, 250, 1328
Psp6I	CCWGG	4 cut(s)	70, 973, 1099, 1278
PspEI	GGTNACC	1 cut(s)	1092
PspGI	CCWGG	4 cut(s)	70, 973, 1099, 1278
PspN4I	GGNNCC	1 cut(s)	1156
PspPI	GGNCC	4 cut(s)	1493, 1529, 1628, 1778
PstI	CTGCAG	1 cut(s)	717
PstNI	CAGNNNCTG	3 cut(s)	284, 791, 1567
PsuI	RGATCY	3 cut(s)	301, 457, 1313
RsaI	GTAC	1 cut(s)	833
RsaNI	GTAC	1 cut(s)	832
RseI	CAYNNNNRTG	2 cut(s)	1035, 1087
SacI	GAGCTC	3 cut(s)	79, 250, 1328
SaqAI	TTAA	5 cut(s)	185, 435, 969, 1203, 1737
SatI	GCNGC	5 cut(s)	38, 380, 713, 938, 1683
Sau3AI	GATC	8 cut(s)	178, 301, 457, 484, 517, 1234, 1313, 1456
Sau96I	GGNCC	4 cut(s)	1493, 1529, 1628, 1778
SchI	GAGTC	4 cut(s)	87, 126, 215, 1034
ScrFI	CCNGG	5 cut(s)	72, 975, 1101, 1280, 1623
SduI	GDGCHC	5 cut(s)	79, 168, 250, 609, 1328
SfaNI	GCATC	5 cut(s)	517, 679, 708, 1261, 1573
SfcI	CTRYAG	1 cut(s)	713
SfuI	TTCGAA	1 cut(s)	1591
SinI	GGWCC	2 cut(s)	1529, 1778
SmiMI	CAYNNNNRTG	2 cut(s)	1035, 1087
SmlI	CTYRAG	1 cut(s)	1632
SmoI	CTYRAG	1 cut(s)	1632
Sse9I	AATT	8 cut(s)	182, 508, 570, 634, 1195, 1294, 1369, 1587
SseBI	AGGCCT	2 cut(s)	757, 1122
SsiI	CCGC	2 cut(s)	38, 1682
SspMI	CTAG	2 cut(s)	945, 1773
SstI	GAGCTC	3 cut(s)	79, 250, 1328
StuI	AGGCCT	2 cut(s)	757, 1122
StyD4I	CCNGG	5 cut(s)	70, 973, 1099, 1278, 1621
StyI	CCWWGG	1 cut(s)	1289
TaaI	ACNGT	3 cut(s)	170, 551, 1358
TaiI	ACGT	2 cut(s)	139, 588
TaqI	TCGA	5 cut(s)	156, 336, 619, 1591, 1672
TaqII	GACCGA	2 cut(s)	1227, 1546
TasI	AATT	8 cut(s)	182, 508, 570, 634, 1195, 1294, 1369, 1587
TauI	GCSGC	2 cut(s)	40, 1685
TfiI	GAWTC	4 cut(s)	61, 67, 1640, 1669
Tru1I	TTAA	5 cut(s)	185, 435, 969, 1203, 1737
Tru9I	TTAA	5 cut(s)	185, 435, 969, 1203, 1737
TscAI	CASTG	2 cut(s)	1431, 1572
TseFI	GTSAC	2 cut(s)	1092, 1576
TseI	GCWGC	3 cut(s)	379, 712, 937
Tsp45I	GTSAC	2 cut(s)	1092, 1576
TspDTI	ATGAA	8 cut(s)	306, 416, 720, 929, 1236, 1320, 1383, 1682
TspGWI	ACGGA	7 cut(s)	256, 314, 1193, 1204, 1306, 1393, 1428
TspRI	CASTG	2 cut(s)	1431, 1572
VneI	GTGCAC	1 cut(s)	164
VpaK11BI	GGWCC	2 cut(s)	1529, 1778
XapI	RAATTY	2 cut(s)	1195, 1294
XcmI	CCANNNNNNNNNTGG	1 cut(s)	106
XmiI	GTMKAC	3 cut(s)	129, 588, 908
XmnI	GAANNNNTTC	2 cut(s)	60, 1137
XspI	CTAG	2 cut(s)	945, 1773

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.