Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7D

Orthogroup ID

OG0000542

Physical Location & Seq

Genomic Coordinates Forward (+)

62418954 .. 62423666

Gene Structure 4713 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7DG438900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1860 bp

ATGTTCTACTCTCACAGCCTCCTTGCTCGGAAAGAGCCGCTCGGCCAAATCTGCGAAGAGATTCTGAATCCAAGAGCTCCTATGGCTCTCCGACTCTCCAGTATTCTCATGGGTGGAGTCGTCATCGTCTACGAACGTAAAGTGAAGCTCCTATTCGATGATGTGCACCGTCTTCTGGATCAATTAAACGAAGCATGGAAGAAGGTGAAATCCAACACAGACTCCACTATCCTACCCAAACGGAGAGCTCAGGCCAAGAAAGAAGCAATAACTCTGCCTGAGGCTGAGCATCAAGATACAGATCTTGTTGGTGACATCGAGCAGTCTCTTGATTTCTCTCACCATGCCACGCTTTTCCACCAGCAAACCGGCTATTTTCTCATGCAACTGGATAGTGTAGATGTGGGAGAAACACTTAACGATAATGCAGTGGAGGGAGATCAACATCAGAACTTACATCAAGCTGATCCTGAGGATATCACATTGCCTAAATGTTATGATCCATCAGATGCACATGCAGATTTGTTCAACTGTCGCTTTGAGAGATTTGAAATTGAGGGAGATGACGTAGACCTCACATCAGGAGAGCCCACACATATTCGACCACCTTCTCCAAATTATCTAATACCTTCTCCACCTCGTCAAGACCAGCATCAGGAAAGACAGCAGGCTAATAATGTGTTTGATGAAGTGCTGCAGATGCAAGATGTTCAAGAGAATGCTCAACAGAGGCAGAGGCCTATAAGGAGGAGAAAGAGAAAAACACCTGCCTCTGTAATGGATAATGACCAAACAATCCATCCTGCTCATGTCTACCAATCTTGGCTTCAAGATACTTCAGATATAGTTTCAAGAAGACGAAGAAACCAAAAGCCCAAGAACATAATGTCGACTATGAAGATTGGTAAACTCATGGAGCAGCCAGCTAGTGTTCTCATGGGTCGTTTATTTAAACCCGGAAGTGGAGAAACATATTATCCAGCTCCTCTCTTAGAGCTATTCAAGGAAAAACATACCCATGACTCACCTTCAGCATTAACCTCGCCACCTCTGCCTCCAGAACCATCATCATGGTCACCACCTGAAAAACAAACTTATCACGACCCGCCTGTTGAAGATTTTCTTAGTGGAGGTGGCTCCCAGTCATTTGTAACCCCCACAGAACAGATACGGACAAATTTAGTTAACAATGACGTAACACTACAACCTGAACTCATGGATAAACTGAAAGCCAATCCTAATGGCGTGAAAGGAGCTGATACCAACCCGGCAACACCAAGAAATTCTGGCGATGAGAGAAGATCCATCCTGAGCTCCTCATCTGGAAAGGGAGTTAACAGAAACAGTTCAGAAGTCAATTCTGGACGGAAGAGGCGTTATTCATCTATACATAGCAATGATGGACTTGAACCAGTATTAGAGGATAATGGATGTCAGCATTCTGATCCAAACTTCAACGTAATAAGGTTATCTGGAAATGGCCCAACACCTGAGCATGAATTATTGATGGAAACTGGACCGACACAGACACAACAACCTATCATCAATCAACCACTGGAAAAAGTGAGTGATGCCATTCGAATGGAACTGAAATCCCATTTTGAAATACCGGGTGGCCCTCAAGTAGAATCCCTGAACAAACTGACTGCTGGAATGAATCGAAGAGGAGCGGCTATGCTTTTCTATCAAACTTGTGGTAGGAATCCATACTATCTTTCCCTTCCTGCTTATGTTATGCGCTTGTTCTTACGAACTGCTTGTGTTCTGTCATCTGCAGTTCTTGCTACTCGTGATTTCGTAAAAGTTAAACAAATTGCCCCTTATGAGGATGTTCTCATTACTAGAGGACCAAATATGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000228 GO:0000280 GO:0000793 GO:0000794 GO:0000798 GO:0000819 GO:0003674 GO:0003682 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0006139 GO:0006259 GO:0006281 GO:0006302 GO:0006323 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007049 GO:0007059 GO:0007062 GO:0007127 GO:0007135 GO:0008150 GO:0008152 GO:0008278 GO:0008608 GO:0009987 GO:0010032 GO:0016043 GO:0022402 GO:0022414 GO:0030261 GO:0031974 GO:0031981 GO:0032991 GO:0033554 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0045132 GO:0045143 GO:0045144 GO:0046483 GO:0048285 GO:0050896 GO:0051177 GO:0051276 GO:0051316 GO:0051321 GO:0051455 GO:0051716 GO:0051754 GO:0061982 GO:0061983 GO:0070013 GO:0070192 GO:0070601 GO:0071103 GO:0071704 GO:0071840 GO:0090304 GO:0098813 GO:0140013 GO:1901360 GO:1903046

KEGG Pathways

Metabolic & Signaling

ko04110 ko04111 map04110 map04111

Pfam Domains

Protein Families

Rad21_Rec8 Rad21_Rec8_N

Protein Analysis

619

Amino Acids

69.69

Weight (kDa)

6.08

Isoelectric Point (pI)

53.81

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Rad21_Rec8_N	PF04825	16 - 80	1.5e-15	N terminus of Rad21 / Rec8 like protein
Rad21_Rec8	PF04824	593 - 619	6.6e-07	Conserved region of Rad21 / Rec8 like protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000542)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G05490 AT5G05490
fragaria_vesca	FvH4_5g27761 FvH4_5g31060 FvH4_5g35270
malus_domestica	MD12G1179600.v1.1
prunus_persica	Prupe.2G254800_v2.0.a1 Prupe.2G254800_v2.0.a1
pyrus_communis	pycom12g16940
rosa_chinensis	RchiOBHm_Chr0c11g0499361 RchiOBHm_Chr0c11g0499371 RchiOBHm_Chr0c11g0499561 RchiOBHm_Chr0c11g0499571 RchiOBHm_Chr0c11g0499581 RchiOBHm_Chr5g0049691 RchiOBHm_Chr5g0049701 RchiOBHm_Chr7g0230591 RchiOBHm_Chr7g0230601 RchiOBHm_Chr7g0231161 RchiOBHm_Chr7g0231171 RchiOBHm_Chr7g0231181 RchiOBHm_Chr7g0236141 RchiOBHm_Chr7g0236431 RchiOBHm_Chr7g0236461 RchiOBHm_Chr7g0236501
rosa_laevigata	RLG00000001078 RLG00000001102 RLG00000001195 RLG00000001205 RLG00000001937 RLG00000030015 RLG00000030017
rosa_multiflora	Rmu_co8170892.1_g000001 Rmu_co8276489.1_g000001 Rmu_sc0000112.1_g000006 Rmu_sc0000768.1_g000037 Rmu_sc0002222.1_g000015 Rmu_sc0002449.1_g000012 Rmu_sc0002449.1_g000029 Rmu_sc0002905.1_g000001 Rmu_sc0003720.1_g000008 Rmu_sc0005578.1_g000004 Rmu_sc0010974.1_g000001 Rmu_sc0010983.1_g000001
rosa_roxburghii	Rroxscaffold_3G00225060 Rroxscaffold_3G00225070 Rroxscaffold_3G00225350 Rroxscaffold_3G00226600 Rroxscaffold_3G00229860
rosa_rugosa	Rorug07G0294500 Rorug07G0294600 Rorug07G0295300 Rorug07G0297000
rosa_samantha	Rh1AG102400 Rh5BG337600 Rh5DG349800 Rh7AG413200 Rh7AG440900 Rh7AG448200 Rh7AG448700 Rh7AG449500 Rh7AG451400 Rh7AG452700 Rh7AG452800 Rh7AG453000 Rh7AG453100 Rh7CG431600 Rh7CG432100 Rh7CG453400 Rh7CG469500 Rh7CG471500 Rh7DG368200 Rh7DG409000 Rh7DG430700 Rh7DG438900 Rh7DG440800
rosa_wichuraiana	Rw1G008170 Rw7G034070 Rw7G036650 Rw7G036670 Rw7G036710 Rw7G037350 Rw7G037530 Rw7G037600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	775
Acc36I	ACCTGC	1 cut(s)	775
AccBSI	CCGCTC	2 cut(s)	40, 1670
AccI	GTMKAC	4 cut(s)	129, 570, 813, 890
AciI	CCGC	3 cut(s)	38, 1106, 1670
AclWI	GGATC	5 cut(s)	186, 461, 494, 1296, 1439
AcoI	YGGCCR	1 cut(s)	43
AcsI	RAATTY	2 cut(s)	1177, 1282
AcuI	CTGAAG	2 cut(s)	822, 1014
AfiI	CCNNNNNNNGG	4 cut(s)	175, 655, 962, 1825
AjuI	GAANNNNNNNTTGG	2 cut(s)	810, 842
AluBI	AGCT	9 cut(s)	77, 148, 248, 464, 926, 983, 997, 1256, 1314
AluI	AGCT	9 cut(s)	77, 148, 248, 464, 926, 983, 997, 1256, 1314
Alw21I	GWGCWC	4 cut(s)	79, 168, 250, 1316
Alw26I	GTCTC	1 cut(s)	330
Alw44I	GTGCAC	1 cut(s)	164
AlwI	GGATC	5 cut(s)	186, 461, 494, 1296, 1439
AoxI	GGCC	5 cut(s)	43, 252, 737, 1480, 1615
ApaLI	GTGCAC	1 cut(s)	164
ApeKI	GCWGC	2 cut(s)	694, 919
ApoI	RAATTY	2 cut(s)	1177, 1282
Asp700I	GAANNNNTTC	3 cut(s)	60, 1119, 1345
AspLEI	GCGC	1 cut(s)	1740
AspS9I	GGNCC	4 cut(s)	1481, 1517, 1616, 1847
AsuC2I	CCSGG	3 cut(s)	957, 1268, 1611
AsuHPI	GGTGA	5 cut(s)	217, 323, 332, 1017, 1068
AsuII	TTCGAA	1 cut(s)	1579
AvaII	GGWCC	2 cut(s)	1517, 1847
AxyI	CCTNAGG	2 cut(s)	279, 471
BaeGI	GKGCMC	1 cut(s)	168
BanII	GRGCYC	4 cut(s)	79, 250, 591, 1316
BauI	CACGAG	1 cut(s)	1788
BbsI	GAAGAC	2 cut(s)	164, 862
Bbv12I	GWGCWC	4 cut(s)	79, 168, 250, 1316
BbvI	GCAGC	2 cut(s)	681, 931
BccI	CCATC	6 cut(s)	511, 807, 1072, 1313, 1394, 1501
BcgI	CGANNNNNNTGC	2 cut(s)	1023, 1057
BcnI	CCSGG	3 cut(s)	957, 1268, 1611
BcoDI	GTCTC	1 cut(s)	330
BfaI	CTAG	2 cut(s)	927, 1842
BfmI	CTRYAG	2 cut(s)	695, 1773
BfuAI	ACCTGC	1 cut(s)	775
BglII	AGATCT	1 cut(s)	301
BisI	GCNGC	4 cut(s)	38, 695, 920, 1671
BlpI	GCTNAGC	1 cut(s)	285
BlsI	GCNGC	4 cut(s)	39, 696, 921, 1672
Bme1390I	CCNGG	3 cut(s)	957, 1268, 1611
Bme18I	GGWCC	2 cut(s)	1517, 1847
BmgT120I	GGNCC	4 cut(s)	1481, 1517, 1616, 1847
BmiI	GGNNCC	1 cut(s)	1138
BmrFI	CCNGG	3 cut(s)	957, 1268, 1611
BmrI	ACTGGG	1 cut(s)	1135
BmsI	GCATC	5 cut(s)	298, 499, 661, 690, 1561
BmuI	ACTGGG	1 cut(s)	1135
BpiI	GAAGAC	2 cut(s)	164, 862
BpmI	CTGGAG	2 cut(s)	82, 1041
Bpu10I	CCTNAGC	3 cut(s)	249, 1310, 1491
Bpu1102I	GCTNAGC	1 cut(s)	285
Bpu14I	TTCGAA	1 cut(s)	1579
BpuEI	CTTGAG	1 cut(s)	1605
BpuMI	CCSGG	3 cut(s)	957, 1268, 1611
BsaBI	GATNNNNATC	2 cut(s)	300, 444
BsaXI	ACNNNNNCTCC	4 cut(s)	206, 236, 552, 582
Bsc4I	CCNNNNNNNGG	4 cut(s)	175, 655, 962, 1825
Bse118I	RCCGGY	1 cut(s)	368
Bse1I	ACTGG	6 cut(s)	99, 393, 1141, 1412, 1519, 1560
Bse21I	CCTNAGG	2 cut(s)	279, 471
Bse3DI	GCAATG	2 cut(s)	482, 1402
Bse8I	GATNNNNATC	2 cut(s)	300, 444
BseGI	GGATG	4 cut(s)	799, 1305, 1436, 1834
BseJI	GATNNNNATC	2 cut(s)	300, 444
BseLI	CCNNNNNNNGG	4 cut(s)	175, 655, 962, 1825
BseMI	GCAATG	2 cut(s)	482, 1402
BseMII	CTCAG	6 cut(s)	263, 270, 276, 462, 1301, 1482
BseNI	ACTGG	6 cut(s)	99, 393, 1141, 1412, 1519, 1560
BseRI	GAGGAG	4 cut(s)	763, 975, 1306, 1680
BseSI	GKGCMC	1 cut(s)	168
BseXI	GCAGC	2 cut(s)	681, 931
BshFI	GGCC	5 cut(s)	45, 254, 739, 1482, 1617
BsiHKAI	GWGCWC	4 cut(s)	79, 168, 250, 1316
BsiSI	CCGG	4 cut(s)	369, 957, 1268, 1610
BslI	CCNNNNNNNGG	4 cut(s)	175, 655, 962, 1825
BsmAI	GTCTC	1 cut(s)	330
BsmI	GAATGC	2 cut(s)	724, 1438
BsnI	GGCC	5 cut(s)	45, 254, 739, 1482, 1617
Bsp119I	TTCGAA	1 cut(s)	1579
Bsp1286I	GDGCHC	5 cut(s)	79, 168, 250, 591, 1316
Bsp143I	GATC	7 cut(s)	178, 301, 439, 466, 499, 1301, 1444
Bsp1720I	GCTNAGC	1 cut(s)	285
BspACI	CCGC	3 cut(s)	38, 1106, 1670
BspANI	GGCC	5 cut(s)	45, 254, 739, 1482, 1617
BspCNI	CTCAG	6 cut(s)	262, 271, 277, 463, 1302, 1483
BspLI	GGNNCC	1 cut(s)	1138
BspMAI	CTGCAG	2 cut(s)	699, 1777
BspMI	ACCTGC	1 cut(s)	775
BspPI	GGATC	5 cut(s)	186, 461, 494, 1296, 1439
BspT104I	TTCGAA	1 cut(s)	1579
BsrBI	CCGCTC	2 cut(s)	40, 1670
BsrDI	GCAATG	2 cut(s)	482, 1402
BsrFI	RCCGGY	1 cut(s)	368
BsrI	ACTGG	6 cut(s)	99, 393, 1141, 1412, 1519, 1560
BssAI	RCCGGY	1 cut(s)	368
BssMI	GATC	7 cut(s)	178, 301, 439, 466, 499, 1301, 1444
BssSI	CACGAG	1 cut(s)	1788
Bst2BI	CACGAG	1 cut(s)	1788
Bst4CI	ACNGT	3 cut(s)	170, 533, 1346
Bst6I	CTCTTC	3 cut(s)	51, 1364, 1657
BstAPI	GCANNNNNTGC	1 cut(s)	1781
BstBI	TTCGAA	1 cut(s)	1579
BstC8I	GCNNGC	2 cut(s)	669, 924
BstDEI	CTNAG	8 cut(s)	249, 279, 285, 471, 991, 1124, 1310, 1491
BstEII	GGTNACC	1 cut(s)	1074
BstF5I	GGATG	4 cut(s)	799, 1305, 1436, 1834
BstHHI	GCGC	1 cut(s)	1740
BstKTI	GATC	7 cut(s)	181, 304, 442, 469, 502, 1304, 1447
BstMAI	GTCTC	1 cut(s)	330
BstMBI	GATC	7 cut(s)	178, 301, 439, 466, 499, 1301, 1444
BstMWI	GCNNNNNNNGC	5 cut(s)	51, 83, 700, 1051, 1781
BstNSI	RCATGY	1 cut(s)	518
BstPI	GGTNACC	1 cut(s)	1074
BstSCI	CCNGG	3 cut(s)	955, 1266, 1609
BstSFI	CTRYAG	2 cut(s)	695, 1773
BstSLI	GKGCMC	1 cut(s)	168
BstV1I	GCAGC	2 cut(s)	681, 931
BstV2I	GAAGAC	2 cut(s)	164, 862
BstX2I	RGATCY	2 cut(s)	301, 1301
BstXI	CCANNNNNNTGG	2 cut(s)	1071, 1582
BstYI	RGATCY	2 cut(s)	301, 1301
Bsu36I	CCTNAGG	2 cut(s)	279, 471
BsuRI	GGCC	5 cut(s)	45, 254, 739, 1482, 1617
BtgZI	GCGATG	1 cut(s)	1305
BtsCI	GGATG	4 cut(s)	799, 1305, 1436, 1834
BtsI	GCAGTG	1 cut(s)	435
BtsIMutI	CAGTG	2 cut(s)	435, 1553
BveI	ACCTGC	1 cut(s)	775
Cac8I	GCNNGC	2 cut(s)	669, 924
CfoI	GCGC	1 cut(s)	1740
Cfr10I	RCCGGY	1 cut(s)	368
Cfr13I	GGNCC	4 cut(s)	1481, 1517, 1616, 1847
DdeI	CTNAG	8 cut(s)	249, 279, 285, 471, 991, 1124, 1310, 1491
DpnI	GATC	7 cut(s)	180, 303, 441, 468, 501, 1303, 1446
DpnII	GATC	7 cut(s)	178, 301, 439, 466, 499, 1301, 1444
DraI	TTTAAA	1 cut(s)	952
EaeI	YGGCCR	1 cut(s)	43
Eam1104I	CTCTTC	3 cut(s)	51, 1364, 1657
EarI	CTCTTC	3 cut(s)	51, 1364, 1657
Ecl136II	GAGCTC	3 cut(s)	77, 248, 1314
Eco147I	AGGCCT	1 cut(s)	739
Eco24I	GRGCYC	4 cut(s)	79, 250, 591, 1316
Eco32I	GATATC	1 cut(s)	478
Eco47I	GGWCC	2 cut(s)	1517, 1847
Eco53kI	GAGCTC	3 cut(s)	77, 248, 1314
Eco57I	CTGAAG	2 cut(s)	822, 1014
Eco81I	CCTNAGG	2 cut(s)	279, 471
Eco91I	GGTNACC	1 cut(s)	1074
EcoICRI	GAGCTC	3 cut(s)	77, 248, 1314
EcoO65I	GGTNACC	1 cut(s)	1074
EcoRV	GATATC	1 cut(s)	478
EcoT38I	GRGCYC	4 cut(s)	79, 250, 591, 1316
FalI	AAGNNNNNCTT	2 cut(s)	1107, 1139
FauI	CCCGC	1 cut(s)	1113
FblI	GTMKAC	4 cut(s)	129, 570, 813, 890
Fnu4HI	GCNGC	4 cut(s)	38, 695, 920, 1671
FokI	GGATG	4 cut(s)	786, 1292, 1443, 1841
FriOI	GRGCYC	4 cut(s)	79, 250, 591, 1316
Fsp4HI	GCNGC	4 cut(s)	38, 695, 920, 1671
FspBI	CTAG	2 cut(s)	927, 1842
GlaI	GCGC	1 cut(s)	1739
GluI	GCNGC	4 cut(s)	38, 695, 920, 1671
GsuI	CTGGAG	2 cut(s)	82, 1041
HaeIII	GGCC	5 cut(s)	45, 254, 739, 1482, 1617
HapII	CCGG	4 cut(s)	369, 957, 1268, 1610
HhaI	GCGC	1 cut(s)	1740
Hin6I	GCGC	1 cut(s)	1738
HinP1I	GCGC	1 cut(s)	1738
HincII	GTYRAC	3 cut(s)	891, 1186, 1336
HindII	GTYRAC	3 cut(s)	891, 1186, 1336
HinfI	GANTC	9 cut(s)	61, 67, 93, 117, 221, 1022, 1628, 1657, 1702
HpaI	GTTAAC	2 cut(s)	1186, 1336
HpaII	CCGG	4 cut(s)	369, 957, 1268, 1610
HphI	GGTGA	5 cut(s)	217, 323, 332, 1017, 1068
Hpy166II	GTNNAC	8 cut(s)	130, 166, 571, 814, 891, 908, 1186, 1336
Hpy188I	TCNGA	8 cut(s)	30, 66, 92, 450, 508, 841, 1351, 1444
Hpy8I	GTNNAC	8 cut(s)	130, 166, 571, 814, 891, 908, 1186, 1336
HpyAV	CCTTC	5 cut(s)	196, 618, 639, 1038, 1730
HpyCH4III	ACNGT	3 cut(s)	170, 533, 1346
HpyCH4IV	ACGT	4 cut(s)	136, 567, 1194, 1458
HpyCH4V	TGCA	8 cut(s)	166, 385, 428, 512, 518, 697, 703, 1775
HpyF10VI	GCNNNNNNNGC	5 cut(s)	51, 83, 700, 1051, 1781
HpyF3I	CTNAG	8 cut(s)	249, 279, 285, 471, 991, 1124, 1310, 1491
HpySE526I	ACGT	4 cut(s)	136, 567, 1194, 1458
HspAI	GCGC	1 cut(s)	1738
KspAI	GTTAAC	2 cut(s)	1186, 1336
Kzo9I	GATC	7 cut(s)	178, 301, 439, 466, 499, 1301, 1444
LmnI	GCTCC	8 cut(s)	82, 153, 916, 988, 1142, 1253, 1319, 1667
Lsp1109I	GCAGC	2 cut(s)	681, 931
LweI	GCATC	5 cut(s)	298, 499, 661, 690, 1561
MaeI	CTAG	2 cut(s)	927, 1842
MaeII	ACGT	4 cut(s)	136, 567, 1194, 1458
MaeIII	GTNAC	4 cut(s)	311, 1074, 1150, 1195
MalI	GATC	7 cut(s)	180, 303, 441, 468, 501, 1303, 1446
MbiI	CCGCTC	2 cut(s)	40, 1670
MboI	GATC	7 cut(s)	178, 301, 439, 466, 499, 1301, 1444
MflI	RGATCY	2 cut(s)	301, 1301
MhlI	GDGCHC	5 cut(s)	79, 168, 250, 591, 1316
MluCI	AATT	8 cut(s)	182, 552, 616, 1177, 1282, 1357, 1499, 1812
MlyI	GAGTC	4 cut(s)	87, 126, 215, 1016
MmeI	TCCRAC	2 cut(s)	115, 237
MroXI	GAANNNNTTC	3 cut(s)	60, 1119, 1345
MseI	TTAA	7 cut(s)	185, 417, 951, 1037, 1185, 1335, 1806
MslI	CAYNNNNRTG	4 cut(s)	1017, 1069, 1395, 1580
MspI	CCGG	4 cut(s)	369, 957, 1268, 1610
MspR9I	CCNGG	3 cut(s)	957, 1268, 1611
Mva1269I	GAATGC	2 cut(s)	724, 1438
MwoI	GCNNNNNNNGC	5 cut(s)	51, 83, 700, 1051, 1781
NciI	CCSGG	3 cut(s)	957, 1268, 1611
NdeII	GATC	7 cut(s)	178, 301, 439, 466, 499, 1301, 1444
NlaIV	GGNNCC	1 cut(s)	1138
NmeAIII	GCCGAG	1 cut(s)	21
NmuCI	GTSAC	2 cut(s)	311, 1074
NspI	RCATGY	1 cut(s)	518
NspV	TTCGAA	1 cut(s)	1579
PaqCI	CACCTGC	1 cut(s)	775
PceI	AGGCCT	1 cut(s)	739
PcsI	WCGNNNNNNNCGW	1 cut(s)	1372
PctI	GAATGC	2 cut(s)	724, 1438
PdmI	GAANNNNTTC	3 cut(s)	60, 1119, 1345
PfeI	GAWTC	5 cut(s)	61, 67, 1628, 1657, 1702
PkrI	GCNGC	4 cut(s)	39, 696, 921, 1672
PleI	GAGTC	4 cut(s)	87, 125, 215, 1016
PpsI	GAGTC	4 cut(s)	87, 125, 215, 1016
Psp124BI	GAGCTC	3 cut(s)	79, 250, 1316
PspEI	GGTNACC	1 cut(s)	1074
PspN4I	GGNNCC	1 cut(s)	1138
PspPI	GGNCC	4 cut(s)	1481, 1517, 1616, 1847
PstI	CTGCAG	2 cut(s)	699, 1777
PsuI	RGATCY	2 cut(s)	301, 1301
RseI	CAYNNNNRTG	4 cut(s)	1017, 1069, 1395, 1580
SacI	GAGCTC	3 cut(s)	79, 250, 1316
SalI	GTCGAC	1 cut(s)	889
SaqAI	TTAA	7 cut(s)	185, 417, 951, 1037, 1185, 1335, 1806
SatI	GCNGC	4 cut(s)	38, 695, 920, 1671
Sau3AI	GATC	7 cut(s)	178, 301, 439, 466, 499, 1301, 1444
Sau96I	GGNCC	4 cut(s)	1481, 1517, 1616, 1847
SchI	GAGTC	4 cut(s)	87, 126, 215, 1016
ScrFI	CCNGG	3 cut(s)	957, 1268, 1611
SduI	GDGCHC	5 cut(s)	79, 168, 250, 591, 1316
SfaNI	GCATC	5 cut(s)	298, 499, 661, 690, 1561
SfcI	CTRYAG	2 cut(s)	695, 1773
SfuI	TTCGAA	1 cut(s)	1579
SinI	GGWCC	2 cut(s)	1517, 1847
SmiMI	CAYNNNNRTG	4 cut(s)	1017, 1069, 1395, 1580
SmlI	CTYRAG	1 cut(s)	1620
SmoI	CTYRAG	1 cut(s)	1620
Sse9I	AATT	8 cut(s)	182, 552, 616, 1177, 1282, 1357, 1499, 1812
SseBI	AGGCCT	1 cut(s)	739
SsiI	CCGC	3 cut(s)	38, 1106, 1670
SspMI	CTAG	2 cut(s)	927, 1842
SstI	GAGCTC	3 cut(s)	79, 250, 1316
StuI	AGGCCT	1 cut(s)	739
StyD4I	CCNGG	3 cut(s)	955, 1266, 1609
TaaI	ACNGT	3 cut(s)	170, 533, 1346
TaiI	ACGT	4 cut(s)	139, 570, 1197, 1461
TaqI	TCGA	6 cut(s)	156, 318, 601, 890, 1579, 1660
TaqII	GACCGA	1 cut(s)	1534
TasI	AATT	8 cut(s)	182, 552, 616, 1177, 1282, 1357, 1499, 1812
TauI	GCSGC	2 cut(s)	40, 1673
TfiI	GAWTC	5 cut(s)	61, 67, 1628, 1657, 1702
Tru1I	TTAA	7 cut(s)	185, 417, 951, 1037, 1185, 1335, 1806
Tru9I	TTAA	7 cut(s)	185, 417, 951, 1037, 1185, 1335, 1806
TscAI	CASTG	2 cut(s)	435, 1560
TseFI	GTSAC	2 cut(s)	311, 1074
TseI	GCWGC	2 cut(s)	694, 919
Tsp45I	GTSAC	2 cut(s)	311, 1074
TspDTI	ATGAA	5 cut(s)	702, 911, 1371, 1512, 1670
TspGWI	ACGGA	3 cut(s)	256, 1186, 1381
TspRI	CASTG	2 cut(s)	435, 1560
VneI	GTGCAC	1 cut(s)	164
VpaK11BI	GGWCC	2 cut(s)	1517, 1847
XapI	RAATTY	2 cut(s)	1177, 1282
XceI	RCATGY	1 cut(s)	518
XcmI	CCANNNNNNNNNTGG	1 cut(s)	106
XmiI	GTMKAC	4 cut(s)	129, 570, 813, 890
XmnI	GAANNNNTTC	3 cut(s)	60, 1119, 1345
XspI	CTAG	2 cut(s)	927, 1842

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.