Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5D

Orthogroup ID

OG0000542

Physical Location & Seq

Genomic Coordinates Forward (+)

48137563 .. 48155729

Gene Structure 18167 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5DG349800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1491 bp

ATGATATCATCAAAGGCAAAACTAAATGCTTTATCAGGCCTCTGGTTCAAAGACAGAGTCTTTGTAGCCTCATTGGATGTAATAGCAGGTTGTGGATCAGCAACTGTCAAAGACTTGGGCTTTTTCCGAGGCTTTGGGCCAAATCCAATGCACCGAAGCCTAACCAGAGAAAGAAATGGCGAAGAACCACAATCCAACTTATGCATCAGGAAAGAAGCAATAACTTTGCCTGAGGCTGAGCATCAACATACAGATCTTGTTGGTGACATCGAGCAGTCTCTTGATTTCTCTCACCATGCCACGCTTTTCCACCAGCAAACCGGCTATTTTCTCATGCAACTGGATAGTGTAGATGTGGGAGAACCACTTAACGATAATGCAGCGGAGGGAGATCATCATCAGAACTTACATCAAGCTGATCCTGAGGATATCACATTGCCTAAATGTTATGATCCATCAGTTGCACATGCAGATTTGTTCAACCCTCGCTTTGAGAGATTTGAAATTGAGGGAGATAACGTAGACCTCACATCAGGAGAGCCCACACATATTCGACCACCTTCCCCAAATTATCTAATACCTTCTCCACCTCGTCAAGACCAGCATCAGGAAGGACAGCAGGCTAATAATGTGTTTGATGAAGTGGTGCAGATGCAGGATGTTCAAGAGAATGCTCAACAGAGGCAGAGGCCTATAAGGAGGAGAAAGAGAAAAACACCTGCCTCTGTAATGGATAATGACCAAACAATCCATCCTGGACATGTGTACCAATCTTGGCTTCAAGATACTTCAGATATAGTTTCAAGAAGAAGAAGAAACCAAAAGCCCAAGAACATAATGTCTACTATGAAGATTGGTAAACTCATGGAGCAGCCAGCTAGTGTTCTCATGGGTCGTTTATTTAAACTTGGGAGTGGAGAAACATATTATCCAGCTCCTCTCTTAGAGCTATTCAAGGAAAAACATACCCATGACTCACCTTCTGCATTCACCTTGCCACCTCTGCCTCCAGAACCATCATCATGGTCACCACCTGGAAGACAAACTTATCAAGACCTGCCTGTTGAAGATTTTCTTAGTGGAGGTGGCTCCCACCAATCTTCAGGACGGAAAAGGCGTTATTCATCTAAAGATAGCAACGATGGACTTGAACCAGTGTCGGAGCATAATGGATATGATCACCCTGATCCAAACTTCAAGGTATCAAGGTTATCTGGAAATGGCCCAACACCTGAGCAAGAACTATTGATGGAAACTGGACCGACACAGACACAACAACCAATCATCAATCAGCCACTGGAAAAAGTGACTGATGCAATTCGAATGGAACTGAAATCCCATTTTGAAATACCGGGTGGCCCTCAAGTAGAATCCCTGAACTACCTGACTGCTGGAATGAATCGAAGAGGAGCGGCTTTGCTTTTCTATCAAACTTGTGTTCTTGCGACTCATGTGATAGAGAACTCGTGCTGGAATGAGCTAGGAAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000228 GO:0000280 GO:0000793 GO:0000794 GO:0000798 GO:0000819 GO:0003674 GO:0003682 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0006139 GO:0006259 GO:0006281 GO:0006302 GO:0006323 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007049 GO:0007059 GO:0007062 GO:0007127 GO:0007135 GO:0008150 GO:0008152 GO:0008278 GO:0008608 GO:0009987 GO:0010032 GO:0016043 GO:0022402 GO:0022414 GO:0030261 GO:0031974 GO:0031981 GO:0032991 GO:0033554 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0045132 GO:0045143 GO:0045144 GO:0046483 GO:0048285 GO:0050896 GO:0051177 GO:0051276 GO:0051316 GO:0051321 GO:0051455 GO:0051716 GO:0051754 GO:0061982 GO:0061983 GO:0070013 GO:0070192 GO:0070601 GO:0071103 GO:0071704 GO:0071840 GO:0090304 GO:0098813 GO:0140013 GO:1901360 GO:1903046

KEGG Pathways

Metabolic & Signaling

ko04110 ko04111 map04110 map04111

Pfam Domains

Protein Families

Rad21_Rec8 Rad21_Rec8_N

Protein Analysis

496

Amino Acids

55.75

Weight (kDa)

5.77

Isoelectric Point (pI)

56.21

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Rad21_Rec8	PF04824	454 - 484	8.6e-07	Conserved region of Rad21 / Rec8 like protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0000542)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G05490 AT5G05490
fragaria_vesca	FvH4_5g27761 FvH4_5g31060 FvH4_5g35270
malus_domestica	MD12G1179600.v1.1
prunus_persica	Prupe.2G254800_v2.0.a1 Prupe.2G254800_v2.0.a1
pyrus_communis	pycom12g16940
rosa_chinensis	RchiOBHm_Chr0c11g0499361 RchiOBHm_Chr0c11g0499371 RchiOBHm_Chr0c11g0499561 RchiOBHm_Chr0c11g0499571 RchiOBHm_Chr0c11g0499581 RchiOBHm_Chr5g0049691 RchiOBHm_Chr5g0049701 RchiOBHm_Chr7g0230591 RchiOBHm_Chr7g0230601 RchiOBHm_Chr7g0231161 RchiOBHm_Chr7g0231171 RchiOBHm_Chr7g0231181 RchiOBHm_Chr7g0236141 RchiOBHm_Chr7g0236431 RchiOBHm_Chr7g0236461 RchiOBHm_Chr7g0236501
rosa_laevigata	RLG00000001078 RLG00000001102 RLG00000001195 RLG00000001205 RLG00000001937 RLG00000030015 RLG00000030017
rosa_multiflora	Rmu_co8170892.1_g000001 Rmu_co8276489.1_g000001 Rmu_sc0000112.1_g000006 Rmu_sc0000768.1_g000037 Rmu_sc0002222.1_g000015 Rmu_sc0002449.1_g000012 Rmu_sc0002449.1_g000029 Rmu_sc0002905.1_g000001 Rmu_sc0003720.1_g000008 Rmu_sc0005578.1_g000004 Rmu_sc0010974.1_g000001 Rmu_sc0010983.1_g000001
rosa_roxburghii	Rroxscaffold_3G00225060 Rroxscaffold_3G00225070 Rroxscaffold_3G00225350 Rroxscaffold_3G00226600 Rroxscaffold_3G00229860
rosa_rugosa	Rorug07G0294500 Rorug07G0294600 Rorug07G0295300 Rorug07G0297000
rosa_samantha	Rh1AG102400 Rh5BG337600 Rh5DG349800 Rh7AG413200 Rh7AG440900 Rh7AG448200 Rh7AG448700 Rh7AG449500 Rh7AG451400 Rh7AG452700 Rh7AG452800 Rh7AG453000 Rh7AG453100 Rh7CG431600 Rh7CG432100 Rh7CG453400 Rh7CG469500 Rh7CG471500 Rh7DG368200 Rh7DG409000 Rh7DG430700 Rh7DG438900 Rh7DG440800
rosa_wichuraiana	Rw1G008170 Rw7G034070 Rw7G036650 Rw7G036670 Rw7G036710 Rw7G037350 Rw7G037530 Rw7G037600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	727
Acc36I	ACCTGC	3 cut(s)	77, 727, 1065
AccBSI	CCGCTC	1 cut(s)	1412
AccI	GTMKAC	2 cut(s)	522, 842
AciI	CCGC	2 cut(s)	383, 1412
AclWI	GGATC	4 cut(s)	103, 413, 446, 1181
AcuI	CTGAAG	2 cut(s)	774, 1086
AfaI	GTAC	1 cut(s)	767
AfiI	CCNNNNNNNGG	1 cut(s)	607
AflIII	ACRYGT	1 cut(s)	760
AjnI	CCWGG	2 cut(s)	754, 1033
AjuI	GAANNNNNNNTTGG	2 cut(s)	762, 794
AluBI	AGCT	5 cut(s)	416, 878, 935, 949, 1480
AluI	AGCT	5 cut(s)	416, 878, 935, 949, 1480
Alw26I	GTCTC	1 cut(s)	282
AlwI	GGATC	4 cut(s)	103, 413, 446, 1181
AlwNI	CAGNNNCTG	2 cut(s)	104, 1297
AoxI	GGCC	5 cut(s)	37, 137, 689, 1222, 1357
ApeKI	GCWGC	2 cut(s)	380, 871
ArsI	GACNNNNNNTTYG	4 cut(s)	42, 44, 74, 76
Asp700I	GAANNNNTTC	1 cut(s)	1071
AspS9I	GGNCC	4 cut(s)	137, 1223, 1259, 1358
AsuC2I	CCSGG	1 cut(s)	1353
AsuHPI	GGTGA	6 cut(s)	275, 284, 969, 982, 1020, 1172
AsuII	TTCGAA	1 cut(s)	1321
AvaII	GGWCC	1 cut(s)	1259
AxyI	CCTNAGG	2 cut(s)	231, 423
BaeI	ACNNNNGTAYC	2 cut(s)	749, 782
BanII	GRGCYC	1 cut(s)	543
BauI	CACGAG	1 cut(s)	1465
BbsI	GAAGAC	1 cut(s)	1045
BbvI	GCAGC	2 cut(s)	392, 883
BccI	CCATC	5 cut(s)	463, 759, 1024, 1136, 1243
BciT130I	CCWGG	2 cut(s)	756, 1035
BclI	TGATCA	1 cut(s)	1177
BcnI	CCSGG	1 cut(s)	1353
BcoDI	GTCTC	1 cut(s)	282
BfaI	CTAG	2 cut(s)	879, 1481
BfuAI	ACCTGC	3 cut(s)	77, 727, 1065
BglII	AGATCT	1 cut(s)	253
BisI	GCNGC	3 cut(s)	381, 872, 1413
BlpI	GCTNAGC	1 cut(s)	237
BlsI	GCNGC	3 cut(s)	382, 873, 1414
Bme1390I	CCNGG	3 cut(s)	756, 1035, 1353
Bme18I	GGWCC	1 cut(s)	1259
BmgT120I	GGNCC	4 cut(s)	137, 1223, 1259, 1358
BmiI	GGNNCC	1 cut(s)	1090
BmrFI	CCNGG	3 cut(s)	756, 1035, 1353
BmsI	GCATC	5 cut(s)	213, 250, 613, 642, 1303
BpiI	GAAGAC	1 cut(s)	1045
BpmI	CTGGAG	1 cut(s)	993
Bpu10I	CCTNAGC	1 cut(s)	1233
Bpu1102I	GCTNAGC	1 cut(s)	237
Bpu14I	TTCGAA	1 cut(s)	1321
BpuEI	CTTGAG	1 cut(s)	1347
BpuMI	CCSGG	1 cut(s)	1353
BsaBI	GATNNNNATC	1 cut(s)	396
BsaJI	CCNNGG	1 cut(s)	127
BsaXI	ACNNNNNCTCC	2 cut(s)	504, 534
Bsc4I	CCNNNNNNNGG	1 cut(s)	607
Bse118I	RCCGGY	1 cut(s)	320
Bse1I	ACTGG	4 cut(s)	345, 1154, 1261, 1302
Bse21I	CCTNAGG	2 cut(s)	231, 423
Bse3DI	GCAATG	1 cut(s)	434
Bse8I	GATNNNNATC	1 cut(s)	396
BseBI	CCWGG	2 cut(s)	756, 1035
BseDI	CCNNGG	1 cut(s)	127
BseGI	GGATG	3 cut(s)	82, 664, 751
BseJI	GATNNNNATC	1 cut(s)	396
BseLI	CCNNNNNNNGG	1 cut(s)	607
BseMI	GCAATG	1 cut(s)	434
BseMII	CTCAG	4 cut(s)	222, 228, 414, 1224
BseNI	ACTGG	4 cut(s)	345, 1154, 1261, 1302
BseRI	GAGGAG	3 cut(s)	715, 927, 1422
BseXI	GCAGC	2 cut(s)	392, 883
BsgI	GTGCAG	1 cut(s)	668
BshFI	GGCC	5 cut(s)	39, 139, 691, 1224, 1359
BsiSI	CCGG	2 cut(s)	321, 1352
BslI	CCNNNNNNNGG	1 cut(s)	607
BsmAI	GTCTC	1 cut(s)	282
BsmI	GAATGC	2 cut(s)	676, 986
BsnI	GGCC	5 cut(s)	39, 139, 691, 1224, 1359
Bsp119I	TTCGAA	1 cut(s)	1321
Bsp1286I	GDGCHC	1 cut(s)	543
Bsp143I	GATC	7 cut(s)	95, 253, 391, 418, 451, 1177, 1186
Bsp1720I	GCTNAGC	1 cut(s)	237
BspACI	CCGC	2 cut(s)	383, 1412
BspANI	GGCC	5 cut(s)	39, 139, 691, 1224, 1359
BspCNI	CTCAG	4 cut(s)	223, 229, 415, 1225
BspLI	GGNNCC	1 cut(s)	1090
BspMI	ACCTGC	3 cut(s)	77, 727, 1065
BspPI	GGATC	4 cut(s)	103, 413, 446, 1181
BspT104I	TTCGAA	1 cut(s)	1321
BsrBI	CCGCTC	1 cut(s)	1412
BsrDI	GCAATG	1 cut(s)	434
BsrFI	RCCGGY	1 cut(s)	320
BsrI	ACTGG	4 cut(s)	345, 1154, 1261, 1302
BssAI	RCCGGY	1 cut(s)	320
BssECI	CCNNGG	1 cut(s)	127
BssMI	GATC	7 cut(s)	95, 253, 391, 418, 451, 1177, 1186
BssSI	CACGAG	1 cut(s)	1465
Bst2BI	CACGAG	1 cut(s)	1465
Bst2UI	CCWGG	2 cut(s)	756, 1035
Bst4CI	ACNGT	1 cut(s)	106
Bst6I	CTCTTC	1 cut(s)	1399
BstBI	TTCGAA	1 cut(s)	1321
BstC8I	GCNNGC	2 cut(s)	621, 876
BstDEI	CTNAG	6 cut(s)	231, 237, 423, 943, 1076, 1233
BstEII	GGTNACC	1 cut(s)	1026
BstF5I	GGATG	3 cut(s)	82, 664, 751
BstKTI	GATC	7 cut(s)	98, 256, 394, 421, 454, 1180, 1189
BstMAI	GTCTC	1 cut(s)	282
BstMBI	GATC	7 cut(s)	95, 253, 391, 418, 451, 1177, 1186
BstMWI	GCNNNNNNNGC	1 cut(s)	1003
BstNI	CCWGG	2 cut(s)	756, 1035
BstNSI	RCATGY	2 cut(s)	470, 764
BstPI	GGTNACC	1 cut(s)	1026
BstSCI	CCNGG	3 cut(s)	754, 1033, 1351
BstV1I	GCAGC	2 cut(s)	392, 883
BstV2I	GAAGAC	1 cut(s)	1045
BstX2I	RGATCY	1 cut(s)	253
BstXI	CCANNNNNNTGG	1 cut(s)	1023
BstYI	RGATCY	1 cut(s)	253
Bsu36I	CCTNAGG	2 cut(s)	231, 423
BsuRI	GGCC	5 cut(s)	39, 139, 691, 1224, 1359
BtsCI	GGATG	3 cut(s)	82, 664, 751
BtsIMutI	CAGTG	2 cut(s)	1161, 1295
BveI	ACCTGC	3 cut(s)	77, 727, 1065
Cac8I	GCNNGC	2 cut(s)	621, 876
CaiI	CAGNNNCTG	2 cut(s)	104, 1297
Cfr10I	RCCGGY	1 cut(s)	320
Cfr13I	GGNCC	4 cut(s)	137, 1223, 1259, 1358
Csp6I	GTAC	1 cut(s)	766
CviAII	CATG	9 cut(s)	296, 334, 467, 761, 865, 889, 971, 1023, 1451
CviQI	GTAC	1 cut(s)	766
DdeI	CTNAG	6 cut(s)	231, 237, 423, 943, 1076, 1233
DpnI	GATC	7 cut(s)	97, 255, 393, 420, 453, 1179, 1188
DpnII	GATC	7 cut(s)	95, 253, 391, 418, 451, 1177, 1186
DraI	TTTAAA	1 cut(s)	904
Eam1104I	CTCTTC	1 cut(s)	1399
EarI	CTCTTC	1 cut(s)	1399
Eco147I	AGGCCT	2 cut(s)	39, 691
Eco24I	GRGCYC	1 cut(s)	543
Eco32I	GATATC	2 cut(s)	6, 430
Eco47I	GGWCC	1 cut(s)	1259
Eco57I	CTGAAG	2 cut(s)	774, 1086
Eco81I	CCTNAGG	2 cut(s)	231, 423
Eco91I	GGTNACC	1 cut(s)	1026
EcoO65I	GGTNACC	1 cut(s)	1026
EcoRII	CCWGG	2 cut(s)	754, 1033
EcoRV	GATATC	2 cut(s)	6, 430
EcoT22I	ATGCAT	1 cut(s)	206
EcoT38I	GRGCYC	1 cut(s)	543
FaeI	CATG	9 cut(s)	299, 337, 470, 764, 868, 892, 974, 1026, 1454
FalI	AAGNNNNNCTT	4 cut(s)	1030, 1062, 1059, 1091
FatI	CATG	9 cut(s)	295, 333, 466, 760, 864, 888, 970, 1022, 1450
FbaI	TGATCA	1 cut(s)	1177
FblI	GTMKAC	2 cut(s)	522, 842
Fnu4HI	GCNGC	3 cut(s)	381, 872, 1413
FokI	GGATG	3 cut(s)	89, 671, 738
FriOI	GRGCYC	1 cut(s)	543
Fsp4HI	GCNGC	3 cut(s)	381, 872, 1413
FspBI	CTAG	2 cut(s)	879, 1481
GluI	GCNGC	3 cut(s)	381, 872, 1413
GsuI	CTGGAG	1 cut(s)	993
HaeIII	GGCC	5 cut(s)	39, 139, 691, 1224, 1359
HapII	CCGG	2 cut(s)	321, 1352
Hin1II	CATG	9 cut(s)	299, 337, 470, 764, 868, 892, 974, 1026, 1454
HinfI	GANTC	5 cut(s)	57, 974, 1370, 1399, 1447
HpaII	CCGG	2 cut(s)	321, 1352
HphI	GGTGA	6 cut(s)	275, 284, 969, 982, 1020, 1172
Hpy166II	GTNNAC	4 cut(s)	523, 766, 843, 860
Hpy188I	TCNGA	4 cut(s)	128, 402, 793, 1162
Hpy8I	GTNNAC	4 cut(s)	523, 766, 843, 860
HpyAV	CCTTC	4 cut(s)	570, 591, 605, 990
HpyCH4III	ACNGT	1 cut(s)	106
HpyCH4IV	ACGT	1 cut(s)	519
HpyF10VI	GCNNNNNNNGC	1 cut(s)	1003
HpyF3I	CTNAG	6 cut(s)	231, 237, 423, 943, 1076, 1233
HpySE526I	ACGT	1 cut(s)	519
Hsp92II	CATG	9 cut(s)	299, 337, 470, 764, 868, 892, 974, 1026, 1454
Ksp22I	TGATCA	1 cut(s)	1177
Kzo9I	GATC	7 cut(s)	95, 253, 391, 418, 451, 1177, 1186
LmnI	GCTCC	5 cut(s)	868, 940, 1094, 1162, 1409
Lsp1109I	GCAGC	2 cut(s)	392, 883
LweI	GCATC	5 cut(s)	213, 250, 613, 642, 1303
MaeI	CTAG	2 cut(s)	879, 1481
MaeII	ACGT	1 cut(s)	519
MaeIII	GTNAC	3 cut(s)	263, 1026, 1306
MalI	GATC	7 cut(s)	97, 255, 393, 420, 453, 1179, 1188
MbiI	CCGCTC	1 cut(s)	1412
MboI	GATC	7 cut(s)	95, 253, 391, 418, 451, 1177, 1186
MboII	GAAGA	9 cut(s)	194, 819, 822, 825, 862, 1050, 1079, 1092, 1416
MflI	RGATCY	1 cut(s)	253
MhlI	GDGCHC	1 cut(s)	543
MluCI	AATT	3 cut(s)	504, 568, 1317
MlyI	GAGTC	3 cut(s)	66, 968, 1441
MmeI	TCCRAC	2 cut(s)	219, 1140
Mph1103I	ATGCAT	1 cut(s)	206
MroXI	GAANNNNTTC	1 cut(s)	1071
MseI	TTAA	2 cut(s)	369, 903
MslI	CAYNNNNRTG	2 cut(s)	969, 1021
MspA1I	CMGCKG	1 cut(s)	383
MspI	CCGG	2 cut(s)	321, 1352
MspR9I	CCNGG	3 cut(s)	756, 1035, 1353
Mva1269I	GAATGC	2 cut(s)	676, 986
MvaI	CCWGG	2 cut(s)	756, 1035
MwoI	GCNNNNNNNGC	1 cut(s)	1003
NciI	CCSGG	1 cut(s)	1353
NdeII	GATC	7 cut(s)	95, 253, 391, 418, 451, 1177, 1186
NlaIII	CATG	9 cut(s)	299, 337, 470, 764, 868, 892, 974, 1026, 1454
NlaIV	GGNNCC	1 cut(s)	1090
NmuCI	GTSAC	3 cut(s)	263, 1026, 1306
NsiI	ATGCAT	1 cut(s)	206
NspI	RCATGY	2 cut(s)	470, 764
NspV	TTCGAA	1 cut(s)	1321
PaqCI	CACCTGC	1 cut(s)	727
PceI	AGGCCT	2 cut(s)	39, 691
PciI	ACATGT	1 cut(s)	760
PcsI	WCGNNNNNNNCGW	1 cut(s)	1114
PctI	GAATGC	2 cut(s)	676, 986
PdmI	GAANNNNTTC	1 cut(s)	1071
PfeI	GAWTC	2 cut(s)	1370, 1399
PflFI	GACNNNGTC	1 cut(s)	56
PfoI	TCCNGGA	1 cut(s)	754
PkrI	GCNGC	3 cut(s)	382, 873, 1414
PleI	GAGTC	3 cut(s)	65, 968, 1441
PpsI	GAGTC	3 cut(s)	65, 968, 1441
PscI	ACATGT	1 cut(s)	760
Psp6I	CCWGG	2 cut(s)	754, 1033
PspEI	GGTNACC	1 cut(s)	1026
PspGI	CCWGG	2 cut(s)	754, 1033
PspN4I	GGNNCC	1 cut(s)	1090
PspPI	GGNCC	4 cut(s)	137, 1223, 1259, 1358
PstNI	CAGNNNCTG	2 cut(s)	104, 1297
PsuI	RGATCY	1 cut(s)	253
PsyI	GACNNNGTC	1 cut(s)	56
RsaI	GTAC	1 cut(s)	767
RsaNI	GTAC	1 cut(s)	766
RseI	CAYNNNNRTG	2 cut(s)	969, 1021
SaqAI	TTAA	2 cut(s)	369, 903
SatI	GCNGC	3 cut(s)	381, 872, 1413
Sau3AI	GATC	7 cut(s)	95, 253, 391, 418, 451, 1177, 1186
Sau96I	GGNCC	4 cut(s)	137, 1223, 1259, 1358
SchI	GAGTC	3 cut(s)	66, 968, 1441
ScrFI	CCNGG	3 cut(s)	756, 1035, 1353
SduI	GDGCHC	1 cut(s)	543
SfaNI	GCATC	5 cut(s)	213, 250, 613, 642, 1303
SfuI	TTCGAA	1 cut(s)	1321
SinI	GGWCC	1 cut(s)	1259
SmiMI	CAYNNNNRTG	2 cut(s)	969, 1021
SmlI	CTYRAG	1 cut(s)	1362
SmoI	CTYRAG	1 cut(s)	1362
Sse9I	AATT	3 cut(s)	504, 568, 1317
SseBI	AGGCCT	2 cut(s)	39, 691
SsiI	CCGC	2 cut(s)	383, 1412
SspMI	CTAG	2 cut(s)	879, 1481
StuI	AGGCCT	2 cut(s)	39, 691
StyD4I	CCNGG	3 cut(s)	754, 1033, 1351
TaaI	ACNGT	1 cut(s)	106
TaiI	ACGT	1 cut(s)	522
TaqI	TCGA	4 cut(s)	270, 553, 1321, 1402
TaqII	GACCGA	1 cut(s)	1276
TasI	AATT	3 cut(s)	504, 568, 1317
TauI	GCSGC	1 cut(s)	1415
TfiI	GAWTC	2 cut(s)	1370, 1399
Tru1I	TTAA	2 cut(s)	369, 903
Tru9I	TTAA	2 cut(s)	369, 903
TscAI	CASTG	2 cut(s)	1161, 1302
TseFI	GTSAC	3 cut(s)	263, 1026, 1306
TseI	GCWGC	2 cut(s)	380, 871
Tsp45I	GTSAC	3 cut(s)	263, 1026, 1306
TspDTI	ATGAA	4 cut(s)	654, 863, 1113, 1412
TspGWI	ACGGA	1 cut(s)	1123
TspRI	CASTG	2 cut(s)	1161, 1302
Tth111I	GACNNNGTC	1 cut(s)	56
VpaK11BI	GGWCC	1 cut(s)	1259
XceI	RCATGY	2 cut(s)	470, 764
XmiI	GTMKAC	2 cut(s)	522, 842
XmnI	GAANNNNTTC	1 cut(s)	1071
XspI	CTAG	2 cut(s)	879, 1481
Zsp2I	ATGCAT	1 cut(s)	206

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.