Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5B

Orthogroup ID

OG0000542

Physical Location & Seq

Genomic Coordinates Forward (+)

47385654 .. 47390920

Gene Structure 5267 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5BG337600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1407 bp

ATGGACGGTTCCAATAATACGGCCAAATCCAATGCACCGAAGCCTAACCAGAGAAAGAAATGGCGAAGAACCACAATCCAACTTATGCATCAGAACTCAGCGTTGAAGAAATCTGAAAATGGACACAAGAAAGAAGCAATAACTTTGCCTGAGGCTGAGCATCAACATACAGATCTTGTTGGTGACATCGAGCAGTCTCTTGATTTCTCTCACCATGCCACGCTTTTCCACCAGCAAACCGGCTATTTTCTCATGCAACTGGATAGTGTAGATGTGGGAGAACCACTTAACGATAATGCAGCGGAGGGAGATCATCATCAGAACTTACATCAAGCTGATCCTGAGGATATCACATTGCCTAAATGTTATGATCCATCAGTTGCACATGCAGATTTGTTCAACCCTCGCTTTGAGAGATTTGAAATTGAGGGAGATAACGTAGACCTCACATCAGGAGAGCCCACACATATTCGACCACCTTCCCCAAATTATCTAATACCTTCTCCACCTCGTCAAGACCAGCATCAGGAAGGACAGCAGGCTAATAATGTGTTTGATGAAGTGGTGCAGATGCAGGATGTTCAAGAGAATGCTCAACAGAGGCAGAGGCCTATAAGGAGGAGAAAGAGAAAAACACCTGCCTCTGTAATGGATAATGACCAAACAATCCATCCTGGACATGTGTACCAATCTTGGCTTCAAGATACTTCAGATATAGTTTCAAGAAGAAGAAGAAACCAAAAGCCCAAGAACATAATGTCTACTATGAAGATTGGTAAACTCATGGAGCAGCCAGCTAGTGTTCTCATGGGTCGTTTATTTAAACTTGGGAGTGGAGAAACATATTATCCAGCTCCTCTCTTAGAGCTATTCAAGGAAAAACATACCCATGACTCACCTTCTGCATTCACCTTGCCACCTCTGCCTCCAGAACCATCATCATGGTCACCACCTGGAAGACAAACTTATCAAGACCTGCCTGTTGAAGATTTTCTTAGTGGAGGTGGCTCCCACCAATCTTCAGGACGGAAAAGGCGTTATTCATCTAAAGATAGCAACGATGGACTTGAACCAGTGTCGGAGCATAATGGATATGATCACCCTGATCCAAACTTCAAGGTATCAAGGTTATCTGGAAATGGCCCAACACCTGAGCAAGAACTATTGATGGAAACTGGACCGACACAGACACAACAACCAATCATCAATCAGCCACTGGAAAAAGTGACTGATGCAATTCGAATGGAACTGAAATCCCATTTTGAAATACCGGGTGGCCCTCAAGTAGAATCCCTGAACTACCTGACTGCTGGAATGAATCGAAGAGGAGCGGCTTTGCTTTTCTATCAAACTTGTGTTCTTGCGACTCGTGATTTTGTAAAAAGGACCAAAGATGTGATAGAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000228 GO:0000280 GO:0000793 GO:0000794 GO:0000798 GO:0000819 GO:0003674 GO:0003682 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0006139 GO:0006259 GO:0006281 GO:0006302 GO:0006323 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007049 GO:0007059 GO:0007062 GO:0007127 GO:0007135 GO:0008150 GO:0008152 GO:0008278 GO:0008608 GO:0009987 GO:0010032 GO:0016043 GO:0022402 GO:0022414 GO:0030261 GO:0031974 GO:0031981 GO:0032991 GO:0033554 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0045132 GO:0045143 GO:0045144 GO:0046483 GO:0048285 GO:0050896 GO:0051177 GO:0051276 GO:0051316 GO:0051321 GO:0051455 GO:0051716 GO:0051754 GO:0061982 GO:0061983 GO:0070013 GO:0070192 GO:0070601 GO:0071103 GO:0071704 GO:0071840 GO:0090304 GO:0098813 GO:0140013 GO:1901360 GO:1903046

KEGG Pathways

Metabolic & Signaling

ko04110 ko04111 map04110 map04111

Pfam Domains

Protein Families

Rad21_Rec8 Rad21_Rec8_N

Protein Analysis

468

Amino Acids

52.97

Weight (kDa)

6.17

Isoelectric Point (pI)

56.74

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Rad21_Rec8	PF04824	427 - 461	4.7e-08	Conserved region of Rad21 / Rec8 like protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000542)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G05490 AT5G05490
fragaria_vesca	FvH4_5g27761 FvH4_5g31060 FvH4_5g35270
malus_domestica	MD12G1179600.v1.1
prunus_persica	Prupe.2G254800_v2.0.a1 Prupe.2G254800_v2.0.a1
pyrus_communis	pycom12g16940
rosa_chinensis	RchiOBHm_Chr0c11g0499361 RchiOBHm_Chr0c11g0499371 RchiOBHm_Chr0c11g0499561 RchiOBHm_Chr0c11g0499571 RchiOBHm_Chr0c11g0499581 RchiOBHm_Chr5g0049691 RchiOBHm_Chr5g0049701 RchiOBHm_Chr7g0230591 RchiOBHm_Chr7g0230601 RchiOBHm_Chr7g0231161 RchiOBHm_Chr7g0231171 RchiOBHm_Chr7g0231181 RchiOBHm_Chr7g0236141 RchiOBHm_Chr7g0236431 RchiOBHm_Chr7g0236461 RchiOBHm_Chr7g0236501
rosa_laevigata	RLG00000001078 RLG00000001102 RLG00000001195 RLG00000001205 RLG00000001937 RLG00000030015 RLG00000030017
rosa_multiflora	Rmu_co8170892.1_g000001 Rmu_co8276489.1_g000001 Rmu_sc0000112.1_g000006 Rmu_sc0000768.1_g000037 Rmu_sc0002222.1_g000015 Rmu_sc0002449.1_g000012 Rmu_sc0002449.1_g000029 Rmu_sc0002905.1_g000001 Rmu_sc0003720.1_g000008 Rmu_sc0005578.1_g000004 Rmu_sc0010974.1_g000001 Rmu_sc0010983.1_g000001
rosa_roxburghii	Rroxscaffold_3G00225060 Rroxscaffold_3G00225070 Rroxscaffold_3G00225350 Rroxscaffold_3G00226600 Rroxscaffold_3G00229860
rosa_rugosa	Rorug07G0294500 Rorug07G0294600 Rorug07G0295300 Rorug07G0297000
rosa_samantha	Rh1AG102400 Rh5BG337600 Rh5DG349800 Rh7AG413200 Rh7AG440900 Rh7AG448200 Rh7AG448700 Rh7AG449500 Rh7AG451400 Rh7AG452700 Rh7AG452800 Rh7AG453000 Rh7AG453100 Rh7CG431600 Rh7CG432100 Rh7CG453400 Rh7CG469500 Rh7CG471500 Rh7DG368200 Rh7DG409000 Rh7DG430700 Rh7DG438900 Rh7DG440800
rosa_wichuraiana	Rw1G008170 Rw7G034070 Rw7G036650 Rw7G036670 Rw7G036710 Rw7G037350 Rw7G037530 Rw7G037600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	646
Acc36I	ACCTGC	2 cut(s)	646, 984
AccBSI	CCGCTC	1 cut(s)	1331
AccI	GTMKAC	2 cut(s)	441, 761
AciI	CCGC	2 cut(s)	302, 1331
AclWI	GGATC	3 cut(s)	332, 365, 1100
AcoI	YGGCCR	1 cut(s)	21
AcuI	CTGAAG	2 cut(s)	693, 1005
AfaI	GTAC	1 cut(s)	686
AfiI	CCNNNNNNNGG	1 cut(s)	526
AflIII	ACRYGT	1 cut(s)	679
AjnI	CCWGG	2 cut(s)	673, 952
AjuI	GAANNNNNNNTTGG	2 cut(s)	681, 713
AluBI	AGCT	4 cut(s)	335, 797, 854, 868
AluI	AGCT	4 cut(s)	335, 797, 854, 868
Alw26I	GTCTC	1 cut(s)	201
AlwI	GGATC	3 cut(s)	332, 365, 1100
AlwNI	CAGNNNCTG	1 cut(s)	1216
AoxI	GGCC	4 cut(s)	21, 608, 1141, 1276
ApeKI	GCWGC	2 cut(s)	299, 790
Asp700I	GAANNNNTTC	1 cut(s)	990
AspS9I	GGNCC	4 cut(s)	1142, 1178, 1277, 1386
AsuC2I	CCSGG	1 cut(s)	1272
AsuHPI	GGTGA	6 cut(s)	194, 203, 888, 901, 939, 1091
AsuII	TTCGAA	1 cut(s)	1240
AvaII	GGWCC	2 cut(s)	1178, 1386
AxyI	CCTNAGG	2 cut(s)	150, 342
BaeI	ACNNNNGTAYC	2 cut(s)	668, 701
BanII	GRGCYC	1 cut(s)	462
BauI	CACGAG	1 cut(s)	1368
BbsI	GAAGAC	1 cut(s)	964
BbvI	GCAGC	2 cut(s)	311, 802
BccI	CCATC	5 cut(s)	382, 678, 943, 1055, 1162
BceAI	ACGGC	1 cut(s)	36
BciT130I	CCWGG	2 cut(s)	675, 954
BclI	TGATCA	1 cut(s)	1096
BcnI	CCSGG	1 cut(s)	1272
BcoDI	GTCTC	1 cut(s)	201
BfaI	CTAG	1 cut(s)	798
BfuAI	ACCTGC	2 cut(s)	646, 984
BglII	AGATCT	1 cut(s)	172
BisI	GCNGC	3 cut(s)	300, 791, 1332
BlpI	GCTNAGC	1 cut(s)	156
BlsI	GCNGC	3 cut(s)	301, 792, 1333
Bme1390I	CCNGG	3 cut(s)	675, 954, 1272
Bme18I	GGWCC	2 cut(s)	1178, 1386
BmgT120I	GGNCC	4 cut(s)	1142, 1178, 1277, 1386
BmiI	GGNNCC	2 cut(s)	10, 1009
BmrFI	CCNGG	3 cut(s)	675, 954, 1272
BmsI	GCATC	5 cut(s)	97, 169, 532, 561, 1222
BpiI	GAAGAC	1 cut(s)	964
BpmI	CTGGAG	1 cut(s)	912
Bpu10I	CCTNAGC	1 cut(s)	1152
Bpu1102I	GCTNAGC	1 cut(s)	156
Bpu14I	TTCGAA	1 cut(s)	1240
BpuEI	CTTGAG	1 cut(s)	1266
BpuMI	CCSGG	1 cut(s)	1272
BsaBI	GATNNNNATC	1 cut(s)	315
BsaXI	ACNNNNNCTCC	2 cut(s)	423, 453
Bsc4I	CCNNNNNNNGG	1 cut(s)	526
Bse118I	RCCGGY	1 cut(s)	239
Bse1I	ACTGG	4 cut(s)	264, 1073, 1180, 1221
Bse21I	CCTNAGG	2 cut(s)	150, 342
Bse3DI	GCAATG	1 cut(s)	353
Bse8I	GATNNNNATC	1 cut(s)	315
BseBI	CCWGG	2 cut(s)	675, 954
BseGI	GGATG	2 cut(s)	583, 670
BseJI	GATNNNNATC	1 cut(s)	315
BseLI	CCNNNNNNNGG	1 cut(s)	526
BseMI	GCAATG	1 cut(s)	353
BseMII	CTCAG	5 cut(s)	111, 141, 147, 333, 1143
BseNI	ACTGG	4 cut(s)	264, 1073, 1180, 1221
BseRI	GAGGAG	3 cut(s)	634, 846, 1341
BseXI	GCAGC	2 cut(s)	311, 802
BsgI	GTGCAG	1 cut(s)	587
BshFI	GGCC	4 cut(s)	23, 610, 1143, 1278
BsiSI	CCGG	2 cut(s)	240, 1271
BslI	CCNNNNNNNGG	1 cut(s)	526
BsmAI	GTCTC	1 cut(s)	201
BsmI	GAATGC	2 cut(s)	595, 905
BsnI	GGCC	4 cut(s)	23, 610, 1143, 1278
Bsp119I	TTCGAA	1 cut(s)	1240
Bsp1286I	GDGCHC	1 cut(s)	462
Bsp143I	GATC	6 cut(s)	172, 310, 337, 370, 1096, 1105
Bsp1720I	GCTNAGC	1 cut(s)	156
BspACI	CCGC	2 cut(s)	302, 1331
BspANI	GGCC	4 cut(s)	23, 610, 1143, 1278
BspCNI	CTCAG	5 cut(s)	110, 142, 148, 334, 1144
BspLI	GGNNCC	2 cut(s)	10, 1009
BspMI	ACCTGC	2 cut(s)	646, 984
BspPI	GGATC	3 cut(s)	332, 365, 1100
BspT104I	TTCGAA	1 cut(s)	1240
BsrBI	CCGCTC	1 cut(s)	1331
BsrDI	GCAATG	1 cut(s)	353
BsrFI	RCCGGY	1 cut(s)	239
BsrI	ACTGG	4 cut(s)	264, 1073, 1180, 1221
BssAI	RCCGGY	1 cut(s)	239
BssMI	GATC	6 cut(s)	172, 310, 337, 370, 1096, 1105
BssSI	CACGAG	1 cut(s)	1368
Bst2BI	CACGAG	1 cut(s)	1368
Bst2UI	CCWGG	2 cut(s)	675, 954
Bst4CI	ACNGT	1 cut(s)	8
Bst6I	CTCTTC	1 cut(s)	1318
BstBI	TTCGAA	1 cut(s)	1240
BstC8I	GCNNGC	2 cut(s)	540, 795
BstDEI	CTNAG	7 cut(s)	97, 150, 156, 342, 862, 995, 1152
BstEII	GGTNACC	1 cut(s)	945
BstF5I	GGATG	2 cut(s)	583, 670
BstKTI	GATC	6 cut(s)	175, 313, 340, 373, 1099, 1108
BstMAI	GTCTC	1 cut(s)	201
BstMBI	GATC	6 cut(s)	172, 310, 337, 370, 1096, 1105
BstMWI	GCNNNNNNNGC	1 cut(s)	922
BstNI	CCWGG	2 cut(s)	675, 954
BstNSI	RCATGY	2 cut(s)	389, 683
BstPI	GGTNACC	1 cut(s)	945
BstSCI	CCNGG	3 cut(s)	673, 952, 1270
BstV1I	GCAGC	2 cut(s)	311, 802
BstV2I	GAAGAC	1 cut(s)	964
BstX2I	RGATCY	1 cut(s)	172
BstXI	CCANNNNNNTGG	1 cut(s)	942
BstYI	RGATCY	1 cut(s)	172
Bsu36I	CCTNAGG	2 cut(s)	150, 342
BsuRI	GGCC	4 cut(s)	23, 610, 1143, 1278
BtsCI	GGATG	2 cut(s)	583, 670
BtsIMutI	CAGTG	2 cut(s)	1080, 1214
BveI	ACCTGC	2 cut(s)	646, 984
Cac8I	GCNNGC	2 cut(s)	540, 795
CaiI	CAGNNNCTG	1 cut(s)	1216
Cfr10I	RCCGGY	1 cut(s)	239
Cfr13I	GGNCC	4 cut(s)	1142, 1178, 1277, 1386
Csp6I	GTAC	1 cut(s)	685
CviAII	CATG	8 cut(s)	215, 253, 386, 680, 784, 808, 890, 942
CviQI	GTAC	1 cut(s)	685
DdeI	CTNAG	7 cut(s)	97, 150, 156, 342, 862, 995, 1152
DpnI	GATC	6 cut(s)	174, 312, 339, 372, 1098, 1107
DpnII	GATC	6 cut(s)	172, 310, 337, 370, 1096, 1105
DraI	TTTAAA	1 cut(s)	823
EaeI	YGGCCR	1 cut(s)	21
Eam1104I	CTCTTC	1 cut(s)	1318
EarI	CTCTTC	1 cut(s)	1318
Eco147I	AGGCCT	1 cut(s)	610
Eco24I	GRGCYC	1 cut(s)	462
Eco32I	GATATC	1 cut(s)	349
Eco47I	GGWCC	2 cut(s)	1178, 1386
Eco57I	CTGAAG	2 cut(s)	693, 1005
Eco81I	CCTNAGG	2 cut(s)	150, 342
Eco91I	GGTNACC	1 cut(s)	945
EcoO65I	GGTNACC	1 cut(s)	945
EcoRII	CCWGG	2 cut(s)	673, 952
EcoRV	GATATC	1 cut(s)	349
EcoT22I	ATGCAT	1 cut(s)	90
EcoT38I	GRGCYC	1 cut(s)	462
FaeI	CATG	8 cut(s)	218, 256, 389, 683, 787, 811, 893, 945
FalI	AAGNNNNNCTT	4 cut(s)	949, 981, 978, 1010
FatI	CATG	8 cut(s)	214, 252, 385, 679, 783, 807, 889, 941
FbaI	TGATCA	1 cut(s)	1096
FblI	GTMKAC	2 cut(s)	441, 761
Fnu4HI	GCNGC	3 cut(s)	300, 791, 1332
FokI	GGATG	2 cut(s)	590, 657
FriOI	GRGCYC	1 cut(s)	462
Fsp4HI	GCNGC	3 cut(s)	300, 791, 1332
FspBI	CTAG	1 cut(s)	798
GluI	GCNGC	3 cut(s)	300, 791, 1332
GsuI	CTGGAG	1 cut(s)	912
HaeIII	GGCC	4 cut(s)	23, 610, 1143, 1278
HapII	CCGG	2 cut(s)	240, 1271
Hin1II	CATG	8 cut(s)	218, 256, 389, 683, 787, 811, 893, 945
HinfI	GANTC	4 cut(s)	893, 1289, 1318, 1366
HpaII	CCGG	2 cut(s)	240, 1271
HphI	GGTGA	6 cut(s)	194, 203, 888, 901, 939, 1091
Hpy166II	GTNNAC	4 cut(s)	442, 685, 762, 779
Hpy188I	TCNGA	5 cut(s)	93, 115, 321, 712, 1081
Hpy8I	GTNNAC	4 cut(s)	442, 685, 762, 779
HpyAV	CCTTC	4 cut(s)	489, 510, 524, 909
HpyCH4III	ACNGT	1 cut(s)	8
HpyCH4IV	ACGT	1 cut(s)	438
HpyF10VI	GCNNNNNNNGC	1 cut(s)	922
HpyF3I	CTNAG	7 cut(s)	97, 150, 156, 342, 862, 995, 1152
HpySE526I	ACGT	1 cut(s)	438
Hsp92II	CATG	8 cut(s)	218, 256, 389, 683, 787, 811, 893, 945
Ksp22I	TGATCA	1 cut(s)	1096
Kzo9I	GATC	6 cut(s)	172, 310, 337, 370, 1096, 1105
LmnI	GCTCC	5 cut(s)	787, 859, 1013, 1081, 1328
Lsp1109I	GCAGC	2 cut(s)	311, 802
LweI	GCATC	5 cut(s)	97, 169, 532, 561, 1222
MaeI	CTAG	1 cut(s)	798
MaeII	ACGT	1 cut(s)	438
MaeIII	GTNAC	3 cut(s)	182, 945, 1225
MalI	GATC	6 cut(s)	174, 312, 339, 372, 1098, 1107
MbiI	CCGCTC	1 cut(s)	1331
MboI	GATC	6 cut(s)	172, 310, 337, 370, 1096, 1105
MflI	RGATCY	1 cut(s)	172
MhlI	GDGCHC	1 cut(s)	462
MluCI	AATT	3 cut(s)	423, 487, 1236
MlyI	GAGTC	2 cut(s)	887, 1360
MmeI	TCCRAC	2 cut(s)	103, 1059
Mph1103I	ATGCAT	1 cut(s)	90
MroXI	GAANNNNTTC	1 cut(s)	990
MseI	TTAA	2 cut(s)	288, 822
MslI	CAYNNNNRTG	2 cut(s)	888, 940
MspA1I	CMGCKG	1 cut(s)	302
MspI	CCGG	2 cut(s)	240, 1271
MspR9I	CCNGG	3 cut(s)	675, 954, 1272
Mva1269I	GAATGC	2 cut(s)	595, 905
MvaI	CCWGG	2 cut(s)	675, 954
MwoI	GCNNNNNNNGC	1 cut(s)	922
NciI	CCSGG	1 cut(s)	1272
NdeII	GATC	6 cut(s)	172, 310, 337, 370, 1096, 1105
NlaIII	CATG	8 cut(s)	218, 256, 389, 683, 787, 811, 893, 945
NlaIV	GGNNCC	2 cut(s)	10, 1009
NmuCI	GTSAC	3 cut(s)	182, 945, 1225
NsiI	ATGCAT	1 cut(s)	90
NspI	RCATGY	2 cut(s)	389, 683
NspV	TTCGAA	1 cut(s)	1240
PaqCI	CACCTGC	1 cut(s)	646
PceI	AGGCCT	1 cut(s)	610
PciI	ACATGT	1 cut(s)	679
PcsI	WCGNNNNNNNCGW	1 cut(s)	1033
PctI	GAATGC	2 cut(s)	595, 905
PdmI	GAANNNNTTC	1 cut(s)	990
PfeI	GAWTC	2 cut(s)	1289, 1318
PfoI	TCCNGGA	1 cut(s)	673
PkrI	GCNGC	3 cut(s)	301, 792, 1333
PleI	GAGTC	2 cut(s)	887, 1360
PpsI	GAGTC	2 cut(s)	887, 1360
PscI	ACATGT	1 cut(s)	679
Psp6I	CCWGG	2 cut(s)	673, 952
PspEI	GGTNACC	1 cut(s)	945
PspGI	CCWGG	2 cut(s)	673, 952
PspN4I	GGNNCC	2 cut(s)	10, 1009
PspPI	GGNCC	4 cut(s)	1142, 1178, 1277, 1386
PstNI	CAGNNNCTG	1 cut(s)	1216
PsuI	RGATCY	1 cut(s)	172
RsaI	GTAC	1 cut(s)	686
RsaNI	GTAC	1 cut(s)	685
RseI	CAYNNNNRTG	2 cut(s)	888, 940
SaqAI	TTAA	2 cut(s)	288, 822
SatI	GCNGC	3 cut(s)	300, 791, 1332
Sau3AI	GATC	6 cut(s)	172, 310, 337, 370, 1096, 1105
Sau96I	GGNCC	4 cut(s)	1142, 1178, 1277, 1386
SchI	GAGTC	2 cut(s)	887, 1360
ScrFI	CCNGG	3 cut(s)	675, 954, 1272
SduI	GDGCHC	1 cut(s)	462
SfaNI	GCATC	5 cut(s)	97, 169, 532, 561, 1222
SfuI	TTCGAA	1 cut(s)	1240
SinI	GGWCC	2 cut(s)	1178, 1386
SmiMI	CAYNNNNRTG	2 cut(s)	888, 940
SmlI	CTYRAG	1 cut(s)	1281
SmoI	CTYRAG	1 cut(s)	1281
Sse9I	AATT	3 cut(s)	423, 487, 1236
SseBI	AGGCCT	1 cut(s)	610
SsiI	CCGC	2 cut(s)	302, 1331
SspMI	CTAG	1 cut(s)	798
StuI	AGGCCT	1 cut(s)	610
StyD4I	CCNGG	3 cut(s)	673, 952, 1270
TaaI	ACNGT	1 cut(s)	8
TaiI	ACGT	1 cut(s)	441
TaqI	TCGA	4 cut(s)	189, 472, 1240, 1321
TaqII	GACCGA	1 cut(s)	1195
TasI	AATT	3 cut(s)	423, 487, 1236
TauI	GCSGC	1 cut(s)	1334
TfiI	GAWTC	2 cut(s)	1289, 1318
Tru1I	TTAA	2 cut(s)	288, 822
Tru9I	TTAA	2 cut(s)	288, 822
TscAI	CASTG	2 cut(s)	1080, 1221
TseFI	GTSAC	3 cut(s)	182, 945, 1225
TseI	GCWGC	2 cut(s)	299, 790
Tsp45I	GTSAC	3 cut(s)	182, 945, 1225
TspDTI	ATGAA	4 cut(s)	573, 782, 1032, 1331
TspGWI	ACGGA	1 cut(s)	1042
TspRI	CASTG	2 cut(s)	1080, 1221
VpaK11BI	GGWCC	2 cut(s)	1178, 1386
XceI	RCATGY	2 cut(s)	389, 683
XmiI	GTMKAC	2 cut(s)	441, 761
XmnI	GAANNNNTTC	1 cut(s)	990
XspI	CTAG	1 cut(s)	798
Zsp2I	ATGCAT	1 cut(s)	90

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.