Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0000542

Physical Location & Seq

Genomic Coordinates Forward (+)

61016364 .. 61021281

Gene Structure 4918 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ21161

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1875 bp

ATGCTCTCTCTTTGTTTCAATTATTTCTTCATAGATTCTCTGTTCCGAGTCAACTCGTTCTCTGTTTTTGTGTATGCAAGGATGGCCGCCACCATGCACGCCAAGATGAACCGCAGGAATCTCAACCAGATCGACCTCATCAGAATCTGCGAAGAGATTCTGAATCCAAGAGCTCCTATGGCTCTCCGACTCTCCAGTATTCTCATGGGTGGAGTCGTCATCGTCTACGAACGTAAAGTGAAGCTCCTATTCGATGATGTGCACCGTCTTCTGGATCAATTAAACGAAGCATGGAAGAAGGTGAAATCCAACACAGACTCCACTATCCTACCCAAACGGAGAGCTCAGGCCAAGAAAGAAGCAATAACTCTGCCTGAGGCTGAGCATGAAGATACAGATCTTGTTGGTGACATCGAGCAGTCTCTTGATTTCTCTCACCATGCCACGCTTTTCCACCAGCAAACCGGCTATTTTCTCATGCAACTGGATAGTGTAGATGTGGGAGAAACACTTAACGATAATGCAGTGGAGGGAGATCAACATCAGAACTTACATCAAGCTGATCCTGAGGATATCACATTGCCTAAATGTTATGATCCATCAGATGCACATGCAGATTTGTTCAACTGTCGCTTTGAGAGATTTGAAATTGAGGGAGATGACGTAGACCTCACATCAGGAGAGCCCACACATATTCGACCACCTTCTCCAAATTATCTAATACCTTCTCCACCTCGTCAAGACCAGCATCAGGAAAGACAGCAGGCTAATAATGTGTTTGATGAAGTGCTGCAGATGCAAGATGTTCAAGAGAATGCTCAACAGAGGCAGAGGCCTATAAGGAGGAGAAAGAGAAAAACACCTGCCTCTGTAATGGATAATGACCAAACAATCCATCCTGCTCATGTGTACCAATCTTGGCTTCAAGATACTTCAGATATAGTTTCAAGAAGACGAAGAAACCAAAAGCCCAAGAACATAATGTCTACTATGAAGATTGGTAAACTCATGGAGCAGCCAGCTAGTGTTCTCATGGGTCATTTATTTAAACCCGGAAGTGGAGAAACATATTATCCAGCTCCTCTCTTAGAGCTATTCAAGGAAAAACATACCCATGACTCACCTTCAGCATTAACCTCGCCACCTCTGCCTCCAGAACCATCATCATGGTCACCACCTGAAAAACAAACTTATCACGACCCGCCTGTTGAAGATTTTCTTAGTGGAGGTGGCTCCCAGTCATTTGTAACCCCCACAGAACAGATACGGACAAATTTAGTTAACAATGACGTAACACTACAACCTGAACTCATGGATAAACTGAAAGCCAATCCTAATGGCATGAAAGGAGCTGATACCAACCCGGCAACACCAAGAAATTCTGGCGATAAGAGAAGATCCATCCTGAGCTCCTCATCTGGAAAGGGAGTTAACAGAAACAGTTCAGAAGTCAATTCTGGACGGAAGAGGCGTTATTCATCTATACATAGCAATGATGGACTTGAACCAGTATTAGAGGATAATGGATGTCAGCATTCTGATCCAAACTTCAACGTAATAAGGTTATCTGGAAATGGCCCAACACCTGAGCATGAATTATTGATGGAAACTGGACCGACACAGACACAACAACCTATCATCAATCAACCACTGGAAAAAGTGACTGATGCCATTCGAATGGAACTGAAATCCCATTTTGAAATACCGGGTGGCCCTCAAGTAGAATCCCTGAACAAACTGACTGCTGGAATGAATCGAAGAGGAGCGGCTATGCTTTTCTATCAAACTTGTGTTCTTGCTACTCGTGATTTCGTAAAAGTTAAACAAATTGCCCCTTATGAGGATGTTCTCATTACTAGAGGACCAAATATGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000228 GO:0000280 GO:0000793 GO:0000794 GO:0000798 GO:0000819 GO:0003674 GO:0003682 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0006139 GO:0006259 GO:0006281 GO:0006302 GO:0006323 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007049 GO:0007059 GO:0007062 GO:0007127 GO:0007135 GO:0008150 GO:0008152 GO:0008278 GO:0008608 GO:0009987 GO:0010032 GO:0016043 GO:0022402 GO:0022414 GO:0030261 GO:0031974 GO:0031981 GO:0032991 GO:0033554 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0045132 GO:0045143 GO:0045144 GO:0046483 GO:0048285 GO:0050896 GO:0051177 GO:0051276 GO:0051316 GO:0051321 GO:0051455 GO:0051716 GO:0051754 GO:0061982 GO:0061983 GO:0070013 GO:0070192 GO:0070601 GO:0071103 GO:0071704 GO:0071840 GO:0090304 GO:0098813 GO:0140013 GO:1901360 GO:1903046

KEGG Pathways

Metabolic & Signaling

ko04110 ko04111 map04110 map04111

Pfam Domains

Protein Families

Rad21_Rec8 Rad21_Rec8_N

Protein Analysis

624

Amino Acids

70.56

Weight (kDa)

6.11

Isoelectric Point (pI)

53.95

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Rad21_Rec8_N	PF04825	28 - 112	2.5e-21	N terminus of Rad21 / Rec8 like protein
Rad21_Rec8	PF04824	572 - 624	2.6e-19	Conserved region of Rad21 / Rec8 like protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0000542)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G05490 AT5G05490
fragaria_vesca	FvH4_5g27761 FvH4_5g31060 FvH4_5g35270
malus_domestica	MD12G1179600.v1.1
prunus_persica	Prupe.2G254800_v2.0.a1 Prupe.2G254800_v2.0.a1
pyrus_communis	pycom12g16940
rosa_chinensis	RchiOBHm_Chr0c11g0499361 RchiOBHm_Chr0c11g0499371 RchiOBHm_Chr0c11g0499561 RchiOBHm_Chr0c11g0499571 RchiOBHm_Chr0c11g0499581 RchiOBHm_Chr5g0049691 RchiOBHm_Chr5g0049701 RchiOBHm_Chr7g0230591 RchiOBHm_Chr7g0230601 RchiOBHm_Chr7g0231161 RchiOBHm_Chr7g0231171 RchiOBHm_Chr7g0231181 RchiOBHm_Chr7g0236141 RchiOBHm_Chr7g0236431 RchiOBHm_Chr7g0236461 RchiOBHm_Chr7g0236501
rosa_laevigata	RLG00000001078 RLG00000001102 RLG00000001195 RLG00000001205 RLG00000001937 RLG00000030015 RLG00000030017
rosa_multiflora	Rmu_co8170892.1_g000001 Rmu_co8276489.1_g000001 Rmu_sc0000112.1_g000006 Rmu_sc0000768.1_g000037 Rmu_sc0002222.1_g000015 Rmu_sc0002449.1_g000012 Rmu_sc0002449.1_g000029 Rmu_sc0002905.1_g000001 Rmu_sc0003720.1_g000008 Rmu_sc0005578.1_g000004 Rmu_sc0010974.1_g000001 Rmu_sc0010983.1_g000001
rosa_roxburghii	Rroxscaffold_3G00225060 Rroxscaffold_3G00225070 Rroxscaffold_3G00225350 Rroxscaffold_3G00226600 Rroxscaffold_3G00229860
rosa_rugosa	Rorug07G0294500 Rorug07G0294600 Rorug07G0295300 Rorug07G0297000
rosa_samantha	Rh1AG102400 Rh5BG337600 Rh5DG349800 Rh7AG413200 Rh7AG440900 Rh7AG448200 Rh7AG448700 Rh7AG449500 Rh7AG451400 Rh7AG452700 Rh7AG452800 Rh7AG453000 Rh7AG453100 Rh7CG431600 Rh7CG432100 Rh7CG453400 Rh7CG469500 Rh7CG471500 Rh7DG368200 Rh7DG409000 Rh7DG430700 Rh7DG438900 Rh7DG440800
rosa_wichuraiana	Rw1G008170 Rw7G034070 Rw7G036650 Rw7G036670 Rw7G036710 Rw7G037350 Rw7G037530 Rw7G037600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	871
Acc36I	ACCTGC	1 cut(s)	871
AccBSI	CCGCTC	1 cut(s)	1766
AccI	GTMKAC	3 cut(s)	225, 666, 986
AciI	CCGC	4 cut(s)	87, 112, 1202, 1766
AclWI	GGATC	5 cut(s)	282, 557, 590, 1392, 1535
AcoI	YGGCCR	1 cut(s)	84
AcsI	RAATTY	2 cut(s)	1273, 1378
AcuI	CTGAAG	2 cut(s)	918, 1110
AfaI	GTAC	1 cut(s)	911
AfiI	CCNNNNNNNGG	4 cut(s)	271, 751, 1058, 1840
AjuI	GAANNNNNNNTTGG	2 cut(s)	906, 938
AluBI	AGCT	9 cut(s)	173, 244, 344, 560, 1022, 1079, 1093, 1352, 1410
AluI	AGCT	9 cut(s)	173, 244, 344, 560, 1022, 1079, 1093, 1352, 1410
Alw21I	GWGCWC	4 cut(s)	175, 264, 346, 1412
Alw26I	GTCTC	1 cut(s)	426
Alw44I	GTGCAC	1 cut(s)	260
AlwI	GGATC	5 cut(s)	282, 557, 590, 1392, 1535
AlwNI	CAGNNNCTG	1 cut(s)	147
AoxI	GGCC	5 cut(s)	84, 348, 833, 1576, 1711
ApaLI	GTGCAC	1 cut(s)	260
ApeKI	GCWGC	2 cut(s)	790, 1015
ApoI	RAATTY	2 cut(s)	1273, 1378
Asp700I	GAANNNNTTC	3 cut(s)	156, 1215, 1441
AspS9I	GGNCC	4 cut(s)	1577, 1613, 1712, 1862
AsuC2I	CCSGG	3 cut(s)	1053, 1364, 1707
AsuHPI	GGTGA	5 cut(s)	313, 419, 428, 1113, 1164
AsuII	TTCGAA	1 cut(s)	1675
AvaII	GGWCC	2 cut(s)	1613, 1862
AxyI	CCTNAGG	2 cut(s)	375, 567
BaeGI	GKGCMC	1 cut(s)	264
BanII	GRGCYC	4 cut(s)	175, 346, 687, 1412
BauI	CACGAG	1 cut(s)	1803
BbsI	GAAGAC	2 cut(s)	260, 958
Bbv12I	GWGCWC	4 cut(s)	175, 264, 346, 1412
BbvI	GCAGC	2 cut(s)	777, 1027
BccI	CCATC	7 cut(s)	76, 607, 903, 1168, 1409, 1490, 1597
BcgI	CGANNNNNNTGC	2 cut(s)	1119, 1153
BcnI	CCSGG	3 cut(s)	1053, 1364, 1707
BcoDI	GTCTC	1 cut(s)	426
BfaI	CTAG	2 cut(s)	1023, 1857
BfmI	CTRYAG	1 cut(s)	791
BfuAI	ACCTGC	1 cut(s)	871
BglII	AGATCT	1 cut(s)	397
BisI	GCNGC	4 cut(s)	87, 791, 1016, 1767
BlpI	GCTNAGC	1 cut(s)	381
BlsI	GCNGC	4 cut(s)	88, 792, 1017, 1768
Bme1390I	CCNGG	3 cut(s)	1053, 1364, 1707
Bme18I	GGWCC	2 cut(s)	1613, 1862
BmgT120I	GGNCC	4 cut(s)	1577, 1613, 1712, 1862
BmiI	GGNNCC	1 cut(s)	1234
BmrFI	CCNGG	3 cut(s)	1053, 1364, 1707
BmrI	ACTGGG	1 cut(s)	1231
BmsI	GCATC	4 cut(s)	595, 757, 786, 1657
BmuI	ACTGGG	1 cut(s)	1231
BpiI	GAAGAC	2 cut(s)	260, 958
BpmI	CTGGAG	2 cut(s)	178, 1137
Bpu10I	CCTNAGC	3 cut(s)	345, 1406, 1587
Bpu1102I	GCTNAGC	1 cut(s)	381
Bpu14I	TTCGAA	1 cut(s)	1675
BpuEI	CTTGAG	1 cut(s)	1701
BpuMI	CCSGG	3 cut(s)	1053, 1364, 1707
BsaBI	GATNNNNATC	2 cut(s)	396, 540
BsaXI	ACNNNNNCTCC	4 cut(s)	302, 332, 648, 678
Bsc4I	CCNNNNNNNGG	4 cut(s)	271, 751, 1058, 1840
Bse118I	RCCGGY	1 cut(s)	464
Bse1I	ACTGG	6 cut(s)	195, 489, 1237, 1508, 1615, 1656
Bse21I	CCTNAGG	2 cut(s)	375, 567
Bse3DI	GCAATG	2 cut(s)	578, 1498
Bse8I	GATNNNNATC	2 cut(s)	396, 540
BseGI	GGATG	5 cut(s)	87, 895, 1401, 1532, 1849
BseJI	GATNNNNATC	2 cut(s)	396, 540
BseLI	CCNNNNNNNGG	4 cut(s)	271, 751, 1058, 1840
BseMI	GCAATG	2 cut(s)	578, 1498
BseMII	CTCAG	6 cut(s)	359, 366, 372, 558, 1397, 1578
BseNI	ACTGG	6 cut(s)	195, 489, 1237, 1508, 1615, 1656
BseRI	GAGGAG	4 cut(s)	859, 1071, 1402, 1776
BseSI	GKGCMC	1 cut(s)	264
BseXI	GCAGC	2 cut(s)	777, 1027
BshFI	GGCC	5 cut(s)	86, 350, 835, 1578, 1713
BsiHKAI	GWGCWC	4 cut(s)	175, 264, 346, 1412
BsiSI	CCGG	4 cut(s)	465, 1053, 1364, 1706
BslI	CCNNNNNNNGG	4 cut(s)	271, 751, 1058, 1840
BsmAI	GTCTC	1 cut(s)	426
BsmI	GAATGC	2 cut(s)	820, 1534
BsnI	GGCC	5 cut(s)	86, 350, 835, 1578, 1713
Bsp119I	TTCGAA	1 cut(s)	1675
Bsp1286I	GDGCHC	5 cut(s)	175, 264, 346, 687, 1412
Bsp143I	GATC	8 cut(s)	129, 274, 397, 535, 562, 595, 1397, 1540
Bsp1720I	GCTNAGC	1 cut(s)	381
BspACI	CCGC	4 cut(s)	87, 112, 1202, 1766
BspANI	GGCC	5 cut(s)	86, 350, 835, 1578, 1713
BspCNI	CTCAG	6 cut(s)	358, 367, 373, 559, 1398, 1579
BspLI	GGNNCC	1 cut(s)	1234
BspMAI	CTGCAG	1 cut(s)	795
BspMI	ACCTGC	1 cut(s)	871
BspPI	GGATC	5 cut(s)	282, 557, 590, 1392, 1535
BspT104I	TTCGAA	1 cut(s)	1675
BsrBI	CCGCTC	1 cut(s)	1766
BsrDI	GCAATG	2 cut(s)	578, 1498
BsrFI	RCCGGY	1 cut(s)	464
BsrI	ACTGG	6 cut(s)	195, 489, 1237, 1508, 1615, 1656
BssAI	RCCGGY	1 cut(s)	464
BssMI	GATC	8 cut(s)	129, 274, 397, 535, 562, 595, 1397, 1540
BssSI	CACGAG	1 cut(s)	1803
Bst2BI	CACGAG	1 cut(s)	1803
Bst4CI	ACNGT	3 cut(s)	266, 629, 1442
Bst6I	CTCTTC	3 cut(s)	147, 1460, 1753
BstBI	TTCGAA	1 cut(s)	1675
BstC8I	GCNNGC	3 cut(s)	99, 765, 1020
BstDEI	CTNAG	8 cut(s)	345, 375, 381, 567, 1087, 1220, 1406, 1587
BstEII	GGTNACC	1 cut(s)	1170
BstF5I	GGATG	5 cut(s)	87, 895, 1401, 1532, 1849
BstKTI	GATC	8 cut(s)	132, 277, 400, 538, 565, 598, 1400, 1543
BstMAI	GTCTC	1 cut(s)	426
BstMBI	GATC	8 cut(s)	129, 274, 397, 535, 562, 595, 1397, 1540
BstMWI	GCNNNNNNNGC	4 cut(s)	83, 179, 796, 1147
BstNSI	RCATGY	1 cut(s)	614
BstPI	GGTNACC	1 cut(s)	1170
BstSCI	CCNGG	3 cut(s)	1051, 1362, 1705
BstSFI	CTRYAG	1 cut(s)	791
BstSLI	GKGCMC	1 cut(s)	264
BstV1I	GCAGC	2 cut(s)	777, 1027
BstV2I	GAAGAC	2 cut(s)	260, 958
BstX2I	RGATCY	2 cut(s)	397, 1397
BstXI	CCANNNNNNTGG	2 cut(s)	1167, 1678
BstYI	RGATCY	2 cut(s)	397, 1397
Bsu36I	CCTNAGG	2 cut(s)	375, 567
BsuRI	GGCC	5 cut(s)	86, 350, 835, 1578, 1713
BtsCI	GGATG	5 cut(s)	87, 895, 1401, 1532, 1849
BtsI	GCAGTG	1 cut(s)	531
BtsIMutI	CAGTG	2 cut(s)	531, 1649
BveI	ACCTGC	1 cut(s)	871
Cac8I	GCNNGC	3 cut(s)	99, 765, 1020
CaiI	CAGNNNCTG	1 cut(s)	147
Cfr10I	RCCGGY	1 cut(s)	464
Cfr13I	GGNCC	4 cut(s)	1577, 1613, 1712, 1862
Csp6I	GTAC	1 cut(s)	910
CviQI	GTAC	1 cut(s)	910
DdeI	CTNAG	8 cut(s)	345, 375, 381, 567, 1087, 1220, 1406, 1587
DpnI	GATC	8 cut(s)	131, 276, 399, 537, 564, 597, 1399, 1542
DpnII	GATC	8 cut(s)	129, 274, 397, 535, 562, 595, 1397, 1540
DraI	TTTAAA	1 cut(s)	1048
EaeI	YGGCCR	1 cut(s)	84
Eam1104I	CTCTTC	3 cut(s)	147, 1460, 1753
EarI	CTCTTC	3 cut(s)	147, 1460, 1753
Ecl136II	GAGCTC	3 cut(s)	173, 344, 1410
Eco147I	AGGCCT	1 cut(s)	835
Eco24I	GRGCYC	4 cut(s)	175, 346, 687, 1412
Eco32I	GATATC	1 cut(s)	574
Eco47I	GGWCC	2 cut(s)	1613, 1862
Eco53kI	GAGCTC	3 cut(s)	173, 344, 1410
Eco57I	CTGAAG	2 cut(s)	918, 1110
Eco81I	CCTNAGG	2 cut(s)	375, 567
Eco91I	GGTNACC	1 cut(s)	1170
EcoICRI	GAGCTC	3 cut(s)	173, 344, 1410
EcoO65I	GGTNACC	1 cut(s)	1170
EcoRV	GATATC	1 cut(s)	574
EcoT38I	GRGCYC	4 cut(s)	175, 346, 687, 1412
FalI	AAGNNNNNCTT	2 cut(s)	1203, 1235
FauI	CCCGC	1 cut(s)	1209
FblI	GTMKAC	3 cut(s)	225, 666, 986
Fnu4HI	GCNGC	4 cut(s)	87, 791, 1016, 1767
FokI	GGATG	5 cut(s)	94, 882, 1388, 1539, 1856
FriOI	GRGCYC	4 cut(s)	175, 346, 687, 1412
Fsp4HI	GCNGC	4 cut(s)	87, 791, 1016, 1767
FspBI	CTAG	2 cut(s)	1023, 1857
GluI	GCNGC	4 cut(s)	87, 791, 1016, 1767
GsuI	CTGGAG	2 cut(s)	178, 1137
HaeIII	GGCC	5 cut(s)	86, 350, 835, 1578, 1713
HapII	CCGG	4 cut(s)	465, 1053, 1364, 1706
HincII	GTYRAC	3 cut(s)	52, 1282, 1432
HindII	GTYRAC	3 cut(s)	52, 1282, 1432
HpaI	GTTAAC	2 cut(s)	1282, 1432
HpaII	CCGG	4 cut(s)	465, 1053, 1364, 1706
HphI	GGTGA	5 cut(s)	313, 419, 428, 1113, 1164
Hpy166II	GTNNAC	9 cut(s)	52, 226, 262, 667, 910, 987, 1004, 1282, 1432
Hpy188I	TCNGA	9 cut(s)	47, 143, 162, 188, 546, 604, 937, 1447, 1540
Hpy8I	GTNNAC	9 cut(s)	52, 226, 262, 667, 910, 987, 1004, 1282, 1432
HpyAV	CCTTC	4 cut(s)	292, 714, 735, 1134
HpyCH4III	ACNGT	3 cut(s)	266, 629, 1442
HpyCH4IV	ACGT	4 cut(s)	232, 663, 1290, 1554
HpyCH4V	TGCA	9 cut(s)	77, 97, 262, 481, 524, 608, 614, 793, 799
HpyF10VI	GCNNNNNNNGC	4 cut(s)	83, 179, 796, 1147
HpyF3I	CTNAG	8 cut(s)	345, 375, 381, 567, 1087, 1220, 1406, 1587
HpySE526I	ACGT	4 cut(s)	232, 663, 1290, 1554
KspAI	GTTAAC	2 cut(s)	1282, 1432
Kzo9I	GATC	8 cut(s)	129, 274, 397, 535, 562, 595, 1397, 1540
LmnI	GCTCC	8 cut(s)	178, 249, 1012, 1084, 1238, 1349, 1415, 1763
Lsp1109I	GCAGC	2 cut(s)	777, 1027
LweI	GCATC	4 cut(s)	595, 757, 786, 1657
MaeI	CTAG	2 cut(s)	1023, 1857
MaeII	ACGT	4 cut(s)	232, 663, 1290, 1554
MaeIII	GTNAC	5 cut(s)	407, 1170, 1246, 1291, 1660
MalI	GATC	8 cut(s)	131, 276, 399, 537, 564, 597, 1399, 1542
MbiI	CCGCTC	1 cut(s)	1766
MboI	GATC	8 cut(s)	129, 274, 397, 535, 562, 595, 1397, 1540
MflI	RGATCY	2 cut(s)	397, 1397
MhlI	GDGCHC	5 cut(s)	175, 264, 346, 687, 1412
MluCI	AATT	9 cut(s)	19, 278, 648, 712, 1273, 1378, 1453, 1595, 1827
MlyI	GAGTC	5 cut(s)	57, 183, 222, 311, 1112
MmeI	TCCRAC	2 cut(s)	211, 333
MroXI	GAANNNNTTC	3 cut(s)	156, 1215, 1441
MseI	TTAA	7 cut(s)	281, 513, 1047, 1133, 1281, 1431, 1821
MslI	CAYNNNNRTG	4 cut(s)	1113, 1165, 1491, 1676
MspI	CCGG	4 cut(s)	465, 1053, 1364, 1706
MspR9I	CCNGG	3 cut(s)	1053, 1364, 1707
Mva1269I	GAATGC	2 cut(s)	820, 1534
MwoI	GCNNNNNNNGC	4 cut(s)	83, 179, 796, 1147
NciI	CCSGG	3 cut(s)	1053, 1364, 1707
NdeII	GATC	8 cut(s)	129, 274, 397, 535, 562, 595, 1397, 1540
NlaIV	GGNNCC	1 cut(s)	1234
NmuCI	GTSAC	3 cut(s)	407, 1170, 1660
NspI	RCATGY	1 cut(s)	614
NspV	TTCGAA	1 cut(s)	1675
PaqCI	CACCTGC	1 cut(s)	871
PceI	AGGCCT	1 cut(s)	835
PcsI	WCGNNNNNNNCGW	1 cut(s)	1468
PctI	GAATGC	2 cut(s)	820, 1534
PdmI	GAANNNNTTC	3 cut(s)	156, 1215, 1441
PfeI	GAWTC	7 cut(s)	35, 118, 144, 157, 163, 1724, 1753
PkrI	GCNGC	4 cut(s)	88, 792, 1017, 1768
PleI	GAGTC	5 cut(s)	56, 183, 221, 311, 1112
PpsI	GAGTC	5 cut(s)	56, 183, 221, 311, 1112
Psp124BI	GAGCTC	3 cut(s)	175, 346, 1412
PspEI	GGTNACC	1 cut(s)	1170
PspN4I	GGNNCC	1 cut(s)	1234
PspPI	GGNCC	4 cut(s)	1577, 1613, 1712, 1862
PstI	CTGCAG	1 cut(s)	795
PstNI	CAGNNNCTG	1 cut(s)	147
PsuI	RGATCY	2 cut(s)	397, 1397
RsaI	GTAC	1 cut(s)	911
RsaNI	GTAC	1 cut(s)	910
RseI	CAYNNNNRTG	4 cut(s)	1113, 1165, 1491, 1676
SacI	GAGCTC	3 cut(s)	175, 346, 1412
SaqAI	TTAA	7 cut(s)	281, 513, 1047, 1133, 1281, 1431, 1821
SatI	GCNGC	4 cut(s)	87, 791, 1016, 1767
Sau3AI	GATC	8 cut(s)	129, 274, 397, 535, 562, 595, 1397, 1540
Sau96I	GGNCC	4 cut(s)	1577, 1613, 1712, 1862
SchI	GAGTC	5 cut(s)	57, 183, 222, 311, 1112
ScrFI	CCNGG	3 cut(s)	1053, 1364, 1707
SduI	GDGCHC	5 cut(s)	175, 264, 346, 687, 1412
SfaNI	GCATC	4 cut(s)	595, 757, 786, 1657
SfcI	CTRYAG	1 cut(s)	791
SfuI	TTCGAA	1 cut(s)	1675
SinI	GGWCC	2 cut(s)	1613, 1862
SmiMI	CAYNNNNRTG	4 cut(s)	1113, 1165, 1491, 1676
SmlI	CTYRAG	1 cut(s)	1716
SmoI	CTYRAG	1 cut(s)	1716
Sse9I	AATT	9 cut(s)	19, 278, 648, 712, 1273, 1378, 1453, 1595, 1827
SseBI	AGGCCT	1 cut(s)	835
SsiI	CCGC	4 cut(s)	87, 112, 1202, 1766
SspMI	CTAG	2 cut(s)	1023, 1857
SstI	GAGCTC	3 cut(s)	175, 346, 1412
StuI	AGGCCT	1 cut(s)	835
StyD4I	CCNGG	3 cut(s)	1051, 1362, 1705
TaaI	ACNGT	3 cut(s)	266, 629, 1442
TaiI	ACGT	4 cut(s)	235, 666, 1293, 1557
TaqI	TCGA	6 cut(s)	132, 252, 414, 697, 1675, 1756
TaqII	GACCGA	1 cut(s)	1630
TasI	AATT	9 cut(s)	19, 278, 648, 712, 1273, 1378, 1453, 1595, 1827
TauI	GCSGC	2 cut(s)	89, 1769
TfiI	GAWTC	7 cut(s)	35, 118, 144, 157, 163, 1724, 1753
Tru1I	TTAA	7 cut(s)	281, 513, 1047, 1133, 1281, 1431, 1821
Tru9I	TTAA	7 cut(s)	281, 513, 1047, 1133, 1281, 1431, 1821
TscAI	CASTG	2 cut(s)	531, 1656
TseFI	GTSAC	3 cut(s)	407, 1170, 1660
TseI	GCWGC	2 cut(s)	790, 1015
Tsp45I	GTSAC	3 cut(s)	407, 1170, 1660
TspDTI	ATGAA	9 cut(s)	19, 122, 402, 798, 1007, 1358, 1467, 1608, 1766
TspGWI	ACGGA	3 cut(s)	352, 1282, 1477
TspRI	CASTG	2 cut(s)	531, 1656
VneI	GTGCAC	1 cut(s)	260
VpaK11BI	GGWCC	2 cut(s)	1613, 1862
XapI	RAATTY	2 cut(s)	1273, 1378
XceI	RCATGY	1 cut(s)	614
XcmI	CCANNNNNNNNNTGG	1 cut(s)	202
XmiI	GTMKAC	3 cut(s)	225, 666, 986
XmnI	GAANNNNTTC	3 cut(s)	156, 1215, 1441
XspI	CTAG	2 cut(s)	1023, 1857

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.